<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-11-23 02:00:13"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352950" ref_strand="+" ref_description="SGN-E352950 [cTOS-14-C13]">
      <seq>cctctgtaagaatagtgtgaatcaaatcgtcggcacggggtacacatacctttcccttaatcctcaaaacaccttccttatcgatttttgcttctttagcctctcctcgcattaccttatctcgaatccagatcagtttctcatcggtaaactgctttcctttaatcttatcaagaaaggaagatcttgcctccacacaagccaaaaattctcccttctcatttaattctagcctcataaggtcattagccagagtctgaacctctctagccaatgggcatctagaaacctgcaagtgagctagacttcccatgctccctgcctttctacttaaagcatctgccacaacattagcctttcccggatgatacaagatagtgatatcatagtccttcagtagctccatcgatctcctctgtctcaaattcaaatctttctgagtaaagacatactgtaaactacgatgatccatatagacttcacacttaaccccatagagataatgtctctattactttaatgcaatcactactgccgctaactccaaatcatgggtcggataattacgttcatgcacctttaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="1315" stop="129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1015" g_stop="429" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E352950" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1015" e_stop="429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTGTAAGAATAGTGTGGATCAAATCATCAACACGGGGCACACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCATCCATTATTGCTTCTTTAGCCTCTCCTCGCAACACCATATCCCGAATTCGGCTTAGTTTCTCATCATCAAACTGTTTTCCCTTGATCTTGTCAAGAAAAGAAGATCTTGCCTCCACACTGGCCAAAAATCCTCCCTTCTCATTTACTTCTAGCCTCATAAAGTTATTAGCCAGAGTCTGAACTTCTCTAGCCAATGGGCGTCTAGAAACTTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCTTTTCTACTTAAGGCGTCTGCCACAACATTAGCCTTTCCCGGATGATACAAGGTAGTGATATCGTAGTCCTTCAGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTTTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATATACTTCACACTTAACCCCATATAGATAATGTCTCCATTGCTTTAATGCAAACACTACCGCAACCAATTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</genome_strand>
        <mrna_strand>CCTCTGTAAGAATAGTGTGAATCAAATCGTCGGCACGGGGTACACATACCTTTCCCTTAATCCTCAAAACACCTTCCTTATCGATTTTTGCTTCTTTAGCCTCTCCTCGCATTACCTTATCTCGAATCCAGATCAGTTTCTCATCGGTAAACTGCTTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAAGCCAAAAATTCTCCCTTCTCATTTAATTCTAGCCTCATAAGGTCATTAGCCAGAGTCTGAACCTCTCTAGCCAATGGGCATCTAGAAACCTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCCTTTCTACTTAAAGCATCTGCCACAACATTAGCCTTTCCCGGATGATACAAGATAGTGATATCATAGTCCTTCAGTAGCTCCATCGATCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGACATACTGTAAACTACGATGATCCATATAGACTTCACACTTAACCCCATAGAGATAATGTCTCTATTACTTTAATGCAATCACTACTGCCGCTAACTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357100" ref_strand="+" ref_description="SGN-E357100 [cTOS-22-N3]">
      <seq>cctctgtaagaatagtgtgaatcaaatcgtcggcacggggtacacatacctttcccttaatcctcaaaacaccttccttatcgatttttgcttctttagcctctcctcgcattaccttatctcgaatccagatcagtttctcatcggtaaactgctttcctttaatcttatcaagaaaggaagatcttgcctccacacaagccaaaaattctcccttctcatttaattctagcctcataaggtcattagccagagtctgaacctctctagccaatgggcatctagaaacctgcaagtgagctagacttcccatgctccctgcctttctacttaaagcatctgccacaacattagcctttcccggatgatacaagatagtgatatcatagtccttcagtagctccatcgatctcctctgtctcaaattcaaatctttctgagtaaagacatactgtaaactacgatgatccatatagacttcacacttaaccccatagagataatgtctctattactttaatgcaatcactactgccgctaactccaaatcatgggtcggataattacgttcatgcacctttaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="1315" stop="129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1015" g_stop="429" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E357100" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1015" e_stop="429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTGTAAGAATAGTGTGGATCAAATCATCAACACGGGGCACACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCATCCATTATTGCTTCTTTAGCCTCTCCTCGCAACACCATATCCCGAATTCGGCTTAGTTTCTCATCATCAAACTGTTTTCCCTTGATCTTGTCAAGAAAAGAAGATCTTGCCTCCACACTGGCCAAAAATCCTCCCTTCTCATTTACTTCTAGCCTCATAAAGTTATTAGCCAGAGTCTGAACTTCTCTAGCCAATGGGCGTCTAGAAACTTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCTTTTCTACTTAAGGCGTCTGCCACAACATTAGCCTTTCCCGGATGATACAAGGTAGTGATATCGTAGTCCTTCAGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTTTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATATACTTCACACTTAACCCCATATAGATAATGTCTCCATTGCTTTAATGCAAACACTACCGCAACCAATTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</genome_strand>
        <mrna_strand>CCTCTGTAAGAATAGTGTGAATCAAATCGTCGGCACGGGGTACACATACCTTTCCCTTAATCCTCAAAACACCTTCCTTATCGATTTTTGCTTCTTTAGCCTCTCCTCGCATTACCTTATCTCGAATCCAGATCAGTTTCTCATCGGTAAACTGCTTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAAGCCAAAAATTCTCCCTTCTCATTTAATTCTAGCCTCATAAGGTCATTAGCCAGAGTCTGAACCTCTCTAGCCAATGGGCATCTAGAAACCTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCCTTTCTACTTAAAGCATCTGCCACAACATTAGCCTTTCCCGGATGATACAAGATAGTGATATCATAGTCCTTCAGTAGCTCCATCGATCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGACATACTGTAAACTACGATGATCCATATAGACTTCACACTTAACCCCATAGAGATAATGTCTCTATTACTTTAATGCAATCACTACTGCCGCTAACTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="1975" stop="1198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1675" g_stop="1499" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1675" e_stop="1499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCGCATACAATGCTTCGAAGGGAGCCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCATTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703641" ref_strand="+" ref_description="SGN-E703641 [FA22AC06]">
      <seq>cgttcttctcgaaaaaaattcaaaatcgtctgaatttgatccttcaaaaacctcgatttcttgctcattcccgaagaaaaactgttcctctgtatagatatgtcaaattccccaattcaagaaccatcaatcgacgactctaacaacgctgaagaaccagacacagaaaacccaaattcagagcttcaatcgcaaccccaaatcttagaaccccttaatcctcaaaaccaagagaatcccatctccagtttgcgaaaacaagagaccccagatgtgattcttgaagaaaaagacctagaaaaagaaaaccctcaagttgttacggctgatgtaaatgctgattttggtttaactgtggatctaccaattgcagatacagaggtaagtgttactgaccttcgaatgatgtcgcctagtaatactatcaagcgtactaagcggaagaagggtaaatgccacacaaagaagctacaagctattgagaaaaaattgcaaatgcttaaggaaaacctaaagcctgttccttttttcccttcaaagattcttgattttgataggcatgagaagttactgaggcgtttggggttgtgggattttgtacatatagagtttgatagagatataagggtggatttgattgcacagttgattgctacttatgattctaagttgagggctagttatgttaatgattttagaattgcggttaatagggctgatttagggcgggcgcttaagctgcctttgaagaaggacaaagggagtgttgctgtggttgatggtatggaagtggatgctgacccattgactgaggagtcgataagctttcttgaaaactttgtgtcaatttgggtgcttttgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="8177" stop="9640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8476" g_stop="9340" g_length="865"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="865" r_length="865" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E703641" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>865</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8476" e_stop="9340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCTTCTCGAAAAAAATTCAAAATCGTCTGAATTTGATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTGAGGCGTTTGGGGTTGTGGGATTTTGTACATATAGAGTTTGATAGAGATATAAGGGTGGATTTGATTGCACAGTTGATTGCTACTTATGATTCTAAGTTGAGGGCTAGTTATGTTAATGATTTTAGAATTGCGGTTAATAGGGCTGATTTAGGGCGGGCGCTTAAGCTGCCTTTGAAGAAGGACAAAGGGAGTGTTGCTGTGGTTGATGGTATGGAAGTGGATGCTGACCCATTGACTGAGGAGTCGATAAGCTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATG</genome_strand>
        <mrna_strand>CGTTCTTCTCGAAAAAAATTCAAAATCGTCTGAATTTGATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTGAGGCGTTTGGGGTTGTGGGATTTTGTACATATAGAGTTTGATAGAGATATAAGGGTGGATTTGATTGCACAGTTGATTGCTACTTATGATTCTAAGTTGAGGGCTAGTTATGTTAATGATTTTAGAATTGCGGTTAATAGGGCTGATTTAGGGCGGGCGCTTAAGCTGCCTTTGAAGAAGGACAAAGGGAGTGTTGCTGTGGTTGATGGTATGGAAGTGGATGCTGACCCATTGACTGAGGAGTCGATAAGCTTTCTTGAAAACTTTGTGTCAATTTGGGTGCTTTTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372024" ref_strand="+" ref_description="SGN-E372024 [TUS-30-O18]">
      <seq>atccttcaaaaacctcgatttcttgctcattcccgaagaaaaactgttcctctgtatagatatgtcaaattccccaattcaagaaccatcaatcgacgactctaacaacgctgaagaaccagacacagaaaacccaaattcagagcttcaatcgcaaccccaaatcttagaaccccttaatcctcaaaaccaagagaatcccatctccagtttgcgaaaacaagagaccccagatgtgattcttgaagaaaaagacctagaaaaagaaaaccctcaagttgttacggctgatgtaaatgctgattttggtttaactgtggatctaccaattgcagatacagaggtaagtgttactgaccttcgaatgatgtcgcctagtaatactatcaagcgtactaagcggaagaagggtaaatgccacacaaagaagctacaagctattgagaaaaaattgcaaatgcttaaggaaaacctacagcctgttccttttttcccttcatagattcttgattttgataggcatgagaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="8214" stop="9343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8514" g_stop="9043" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E372024" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8514" e_stop="9043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGT</genome_strand>
        <mrna_strand>ATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTACAGCCTGTTCCTTTTTTCCCTTCATAGATTCTTGATTTTGATAGGCATGAGAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287084" ref_strand="+" ref_description="SGN-E287084 [cLES-6-P22]">
      <seq>atccttcaaaaacctcgatttcttgctcattcccgaagaaaaactgttcctctgtatagatatgtcaaattccccaattcaagaaccatcaatcgacgactctaacaacgctgaagaaccacacacagaaaacccaaattcagagcttcaatcgcaaccccaaatcttagaaccccttaatcctcaaaaccaagagaatcccatctccagtttgcgaaaacaagagaccccagatgtgattcttgaagaaaaagacctacaaaaagaaaaccctcaagttgttacggctgatgtaaatgctgattttggtttaactgtggatctaccaattgcacatacagaggtaagtgttactgaccttcgaatgatgtcgcctagtaatactatcaagcgtactaagcggaagaagggttaatgccacacaaagaagctacaagctattgagaaaaaattgcaaatgcttaaggaagacctaaagcctgttccttttttcccttcaaagattcttgattttgataggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="8214" stop="9337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8514" g_stop="9037" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E287084" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8514" e_stop="9037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATG</genome_strand>
        <mrna_strand>ATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCACACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTACAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCACATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTTAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAGACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339732" ref_strand="+" ref_description="SGN-E339732 [cTOE-16-O14]">
      <seq>aaaactgttcctctgtatagatatgtcaaattccccaattcaagaaccatcaatcgacgactctaacaacgctgaagaaccagacacagaaaacccaaattcagagcttcaatcgcaaccccaaatcttagaaccccttaatcctcaaaaccaagagaatcccatctccagtttgcgaaaacaagagaccccagatgtgattcttgaagaaaaagacctagaaaaagaaaaccctcaagttgttacggctgatgtaaatgctgattttggtttaactgtggatctaccaattgcagatacagaggtaagtgttactgaccttcgaatgatgtcgcctagtaatactatcaagcgtactaagcggaagaagggtaaatgccacacaaagaagctacaagctattgagaaaaaattgcaaatgcttaaggaaaacctaaagcctgttccttttttcccttcaaagattcttgattttgataggcatgagaagttactgaggcgtttggggttgtgggattttgtacatatagagtttgatagagatataagggtggatttgattgcacagttgattgctacttatgattctaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="8253" stop="9444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8553" g_stop="9144" g_length="592"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="592" r_length="592" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E339732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8553" e_stop="9144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTGAGGCGTTTGGGGTTGTGGGATTTTGTACATATAGAGTTTGATAGAGATATAAGGGTGGATTTGATTGCACAGTTGATTGCTACTTATGATTCTAAG</genome_strand>
        <mrna_strand>AAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTGAGGCGTTTGGGGTTGTGGGATTTTGTACATATAGAGTTTGATAGAGATATAAGGGTGGATTTGATTGCACAGTTGATTGCTACTTATGATTCTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E443495" ref_strand="+" ref_description="SGN-E443495 [cSTA-38-K17]">
      <seq>ctttgaagaaggacaaaggtagtgttgctgtggttgatggtatggacgtggatgctgatcccttgtctgaggagtcgataaactttcttgagaactttgtgtcaatttgggtgcttttgcatgaggacgcgtggataatgcctaatgaggtattaagttggactaaggctataaaagatgggcaccctgagaaagtggattgggctggattgttctggttcatggtggagaaggaattgacacaaggggaccagttagtggactgttattatgctgcacatttgcaatacttgataaagtcacagcgtgagcaggtgttgtatagtgaagagccagaaaaggtggagtttgaagctgatgtgaaggaggaggatgactgtggtaatgaggacaatgcaagagtcggtgggtcaatcgaaactcaagaattggatggagctttaggggaggaactgagtattgagttgacgttgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="8918" stop="9993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9218" g_stop="9693" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E443495" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9218" e_stop="9693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGAAGAAGGACAAAGGGAGTGTTGCTGTGGTTGATGGTATGGAAGTGGATGCTGACCCATTGACTGAGGAGTCGATAAGCTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATGAGGACGCGTGGATAATGCCTAATGAGGTCTTAAGTTGGACTAAGGCTATAAAAGATGGGCACCCTGAGAAAGTGGATTGGGCTGGATTGTTCTGGTTCATGGTGGAGAAGGAACTGACACAAGGGGACCAATTAGTGGACTGTTATTATGCTGCACATTTGCAATACTTGATAAAGTCACAGCGTGAGCAGGTGTTGTATAGTGAAGAACCAGAAAAGGTGGAGTCTGAAGCTGATGTGAAGGAGGAGGAGGATTGTGGTAACGAGGACAATGCAAGAGTCGGTGGGTCAATCGAAGCTCAAGAATTGGATGGAGCTTTAGGGGAGGAACTGAGTATTGAGTTGACGTTGGGT</genome_strand>
        <mrna_strand>CTTTGAAGAAGGACAAAGGTAGTGTTGCTGTGGTTGATGGTATGGACGTGGATGCTGATCCCTTGTCTGAGGAGTCGATAAACTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATGAGGACGCGTGGATAATGCCTAATGAGGTATTAAGTTGGACTAAGGCTATAAAAGATGGGCACCCTGAGAAAGTGGATTGGGCTGGATTGTTCTGGTTCATGGTGGAGAAGGAATTGACACAAGGGGACCAGTTAGTGGACTGTTATTATGCTGCACATTTGCAATACTTGATAAAGTCACAGCGTGAGCAGGTGTTGTATAGTGAAGAGCCAGAAAAGGTGGAGTTTGAAGCTGATGTGAAGGAGGAGGATGACTGTGGTAATGAGGACAATGCAAGAGTCGGTGGGTCAATCGAAACTCAAGAATTGGATGGAGCTTTAGGGGAGGAACTGAGTATTGAGTTGACGTTGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325499" ref_strand="+" ref_description="SGN-E325499 [cTOC-1-N20]">
      <seq>agagaaacagtggttttgtgaaagaaaagagctacgagccttttgtcagagatgtagatgcaggaagcaggctttggataacgatgaggagaagaaagaaaaccatgagttggaagatgagaatgagaatgagaatgacaacgacacgaacaatgacaatgacaatgacaatgataatgtgaatgatgatgatgttgaggaagaggatgaaggagcagagaggcatgaggttgaagatgaatttgatgttattcctagtaatggtactcttgttggggatgggatgacaggaaatttactgcaaacgatggaaagtacacagattggatttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9498" stop="10424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9783" g_stop="10124" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E325499" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.027" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9783" e_stop="10124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAACAGTGGCTTTTTGATGAAAGAAAAGATGCTAACGAGCCTTTGTTACAGAGATGTAAGATGCAGGAAGCAGTGTCTTTGGATAACGATGAGGAGAAGAAAGAAAACCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTAC</genome_strand>
        <mrna_strand>AGAGAAACAGTGG--TTTTG-TGAAAGAAAAGA-GCT-ACGAGCCTTT-TGTCAGAGATGT-AGATGCAGGAAGCAG-G-CTTTGGATAACGATGAGGAGAAGAAAGAAAACCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569728" ref_strand="+" ref_description="SGN-E569728 [14205]">
      <seq>ctttttgatgaaagaaaagatgctaacgagcctttgttacagagatgtaagatacaggaagcagtgtctttggataatgatgaggagaagaaagaaaaccatgagttggcagatgacaatgacaacgacactaacaatgacaatgataatgtgaatgatgatgatgttgaggaggaggatgaaggagcagagaggcatgaggttgaagatgaatttgatgttattcctagtaatggtactcttgttggggatggattgacaggaaatctacttcaaacgatggaaagtacacagattggatttacttcacaggggcaacttcatgatcagtcttcattgagcttctcgctactagagatgagatgcatacaggtggtcccttttttggcagtggaagtaagagagagatggagattgagcctggatgtggctcatcattctctccatgggcagcagcaagaggttgaggattgaggggaatgggacgagaagccattaattttgggatcatgcatggagcaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9496" stop="10644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9796" g_stop="10344" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E569728" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.046" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E569728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9796" e_stop="10344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTGATGAAAGAAAAGATGCTAACGAGCCTTTGTTACAGAGATGTAAGATGCAGGAAGCAGTGTCTTTGGATAACGATGAGGAGAAGAAAGAAAACCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCT-GATATGGCTCATCATTCTCTCCAT-GGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATG</genome_strand>
        <mrna_strand>CTTTTTGATGAAAGAAAAGATGCTAACGAGCCTTTGTTACAGAGATGTAAGATACAGGAAGCAGTGTCTTTGGATAATGATGAGGAGAAGAAAGAAAACCATGAGTTGGCAGATGACAAT--G----------ACAACG--AC--AC--T----A--ACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAGGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGATTGACAGGAAATCTACTTCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCA-TTGAGCTTCTCGCTACTAGAGATGAGATGCATACAGGTGGTCCCTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAGCCTGGATGTGGCTCATCATTCTCTCCATGGGCAGCAGCAAGAGGTTGAGGATTGA-GGGGAATGGGACGAGAAGCCATTAATTTTGGGATCATGCATGGAGCAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557679" ref_strand="+" ref_description="SGN-E557679 [16515]">
      <seq>gcctttgttacagagatgtaagatgcacggaagcagtgtctttggataatgatgaggagaagaaagaaagccatgagttggcagatgacaatgacaatgacactaacaatgacaatgataatgataatgtgaatgatgatgatgttgaggaggaggatgaaggagcagagaggcatgaggttgaagatgaatttgatgttattcctagtaatggtactcttgttggggatggattgacaggaaatctacttcaaacgatggaaagtacacagattggatttacttcacaggggcaacttcatgatcagtcttcagttgagcttctcgctactagagatgagatgcatacaggtggtcccttttttggcagtggaagtaagagagagatggagattgagcctgatgtggctcatcattctctccatgtcagcagcaagaggttgaggattgagggggaatgggacgagaagccattagattttggatcatgcatggagcaaatgcagcatctaatgatgaaggctaggatgatgtatgaagcaaaggaacaaaatgaggatcaactaaacataaaccagcaaatttttcttagcgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaacagggatggagatattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9525" stop="10818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9825" g_stop="10513" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E557679" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E557679" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9825" e_stop="10513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTTGTTACAGAGATGTAAGATGCA-GGAAGCAGTGTCTTTGGATAACGATGAGGAGAAGAAAGAAAACCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAA-AGGGATGCAGATA</genome_strand>
        <mrna_strand>GCCTTTGTTACAGAGATGTAAGATGCACGGAAGCAGTGTCTTTGGATAATGATGAGGAGAAGAAAGAAAGCCATGAGTTGGCAGATGACAATGACAAT--G----AC-ACTA-AC-AA---TGACAATG--A-T---AATGATAATGTGAATGATGATGATGTTGAGGAGGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGATTGACAGGAAATCTACTTCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTCGCTACTAGAGATGAGATGCATACAGGTGGTCCCTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAGCCTGATGTGGCTCATCATTCTCTCCATGTCAGCAGCAAGAGGTTGAGGATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAAATGCAGCATCTAATGATGAAGGCTAGGATGATGTATGAAGCAAAGGAACAAAATGAGGATCAACTAAACATAAACCAGCAAATTTTTCTTAGCGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAACAGGGATGGAGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247794" ref_strand="+" ref_description="SGN-E247794 [cLEF-42-J20]">
      <seq>ccatgagttggaagatgagaatgagaatgggaatgacaacgacacgaacaatgacaatgacaatgacaatgataatgtgaatgatgatgatgttgaggaagaggatgaaggagcagagaggcatgaggttgaagatgaatttgatgttattcctagtaatggtactcttgttggggatgggatgacaggaaatttactgcaaacgatggaaagtacacagattggatttacttcacaggggcaacttcatgatcagtcttcagttgagcttcttgcttctagagatgagatgcatacaggtggccacttttttggcagtggaagtaagagagagatggagattgaacctgatatggctcatcattctctccatggcagcagcaagaggttgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaagaaatacaaaaaagggatgcagatatttgtcgtcttgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9594" stop="10828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9894" g_stop="10528" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E247794" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247794" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9894" e_stop="10528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAAC</genome_strand>
        <mrna_strand>CCATGAGTTGGAAGATGAGAATGAGAATGGGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAAGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711012" ref_strand="+" ref_description="SGN-E711012 [FA57CG05]">
      <seq>gttattcctagtaatggtactcttgttggggatgggatgacaggaaatttactgcaaacgatggaaagtacacagattggatttacttcacaggggcaacttcatgatcagtcttcagttgagcttcttgcttctagagatgagatgcatacaggtggccacttttttggcagtggaagtaagagagagatggagattgaacctgatatggctcatcattctctccatggcagcagcaagaggttgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaaagggatgcagatatttgtcgtcttgaacgggagctttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9739" stop="11152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10039" g_stop="10852" g_length="814"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="814" r_length="814" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E711012" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E711012" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10039" e_stop="10852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGA</genome_strand>
        <mrna_strand>GTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374889" ref_strand="+" ref_description="SGN-E374889 [TUS-15-O9]">
      <seq>tcagtcttcagttgagcttcttgcttctagagatgagatgcatacaggtggccacttttttggcagtggaagtaagagagagatggagattgaacctgatatggctcatcattctctccatggcagcagcaagaggttgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaaagggatgcagatatttgtcgtcttgaacgggagctttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9846" stop="11117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10146" g_stop="10817" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E374889" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10146" e_stop="10817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCT</genome_strand>
        <mrna_strand>TCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204748" ref_strand="+" ref_description="SGN-E204748 [cLEC-14-N12]">
      <seq>tcagtcttcagttgagcttcttgcttctagagatgagatgcatacaggtggccacttttttggcagtggaagtaagagagagatggagattgaacctgatatggctcatcattctctccatggcagcagcaagaggttgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9846" stop="10767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10146" g_stop="10467" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E204748" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10146" e_stop="10467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCAC</genome_strand>
        <mrna_strand>TCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206571" ref_strand="+" ref_description="SGN-E206571 [cLEC-31-I5]">
      <seq>agtaagagagagatggagattgagcctgatatggctcatcattctctccatggcagcagcaagaggttgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctctgatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataatccaacaaatttttcttagtgaagtgcataaaagggacagctgcattgatcacttgcataactctgaatgcgaggaaatacaaaaaagggatgcaaatatttgtcgtctcgaacgggagcttcttatgatgggaaatatattggatggttaccggaaggcattggaggaaacccagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9916" stop="10893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10216" g_stop="10593" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E206571" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10216" e_stop="10593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAA</genome_strand>
        <mrna_strand>AGTAAGAGAGAGATGGAGATTGAGCCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTCTGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAATCCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCTGCATTGATCACTTGCATAACTCTGAATGCGAGGAAATACAAAAAAGGGATGCAAATATTTGTCGTCTCGAACGGGAGCTTCTTATGATGGGAAATATATTGGATGGTTACCGGAAGGCATTGGAGGAAACCCAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239635" ref_strand="+" ref_description="SGN-E239635 [cLED-23-L16]">
      <seq>tgcgaattgagggggaatgggacgagaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaaagggatgcagatatttgtcgtcttgaacgggagctttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="9983" stop="10953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10283" g_stop="10653" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E239635" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10283" e_stop="10653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCT</genome_strand>
        <mrna_strand>TGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270993" ref_strand="+" ref_description="SGN-E270993 [cLEM-22-M23]">
      <seq>agaagccattagattttggatcatgcatggagcagatgcagcacctaatgatgaaggctaggatgatgtatgaagcgaaggaacagaatgaggatcaattaaacataaaccaacaaatttttcttagtgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaaagggatgcagatatttgtcgtcttgaacgggagctttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10007" stop="11197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10307" g_stop="10897" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E270993" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10307" e_stop="10897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTG</genome_strand>
        <mrna_strand>AGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692595" ref_strand="+" ref_description="SGN-E692595 [LH_Ea09C01]">
      <seq>ccggtagcaaatttttcttagcgaagtgcataaaagggacagcgtaattgatcacttgcataagtctaaatgtgaggaaatacaaaaaagggatgcagatatttgtcgtcttgaacgggagctttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaactcccgactgccctgcagatgaatgatttgctttgccaaatctccagttccatggttgaaaaaatgcaggattttttgcagatgtttagcttacgttcgacatggtgcttcttatattactcgccgggaggtggtgttatgcaagcatttttggagaagggttactatagctcaggctggtttatctatgtttttgttttgtggccttctctgttatatgctttagaagtttcaagtacttaaaattccattaggtattgatggatgttagctctaatgtgattattattacatagggatgtgactttattttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10118" stop="13316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10413" g_stop="10984" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="572" r_length="572" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13016" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="818" r_length="246" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E692595" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10413" e_stop="10984"/>
          <exon e_start="12771" e_stop="13016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTAT</genome_strand>
        <mrna_strand>CCGGTAGCAAATTTTTCTTAGCGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAACTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTCCAGTTCCATGGTTGAAAAAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTTGCAGATGTTTAGCTTACGTTCGACATGGTGCTTCTTATATTACTCGCCGGGAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGGTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTCTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTACATAGGGATGTGACTTTATTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284631" ref_strand="+" ref_description="SGN-E284631 [cLES-3-F4]">
      <seq>ttttatgatgggaaatatattggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10236" stop="11212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10536" g_stop="10912" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E284631" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10536" e_stop="10912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAG</genome_strand>
        <mrna_strand>TTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284789" ref_strand="+" ref_description="SGN-E284789 [cLES-3-F6]">
      <seq>tgggaaatattttggatggttacaggaaggcatggaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcacaaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10244" stop="11169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10544" g_stop="10869" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E284789" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10544" e_stop="10869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATG</genome_strand>
        <mrna_strand>TGGGAAATATTTTGGATGGTTACAGGAAGGCATGGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCACAAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582732" ref_strand="+" ref_description="SGN-E582732 [8365]">
      <seq>tattttggatggttacaggaaggcattgaaggaaacccagaaacagttctctgagtataggaaaaaatttcagctgtctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaaggtacgcctcaagcaagaggaagaaactcgatccaattgcttgttcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgatgggccttgaggatatagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaactcccgactgccctgcagatgaatgatttgctttgccaaatctttagttccatggttgaaatgcaggattttgccgatgtctaacttacatttgacatggtgcttcttatactactcgccggaaggtcgttatgcaagcattttggagaaagcttactatagctcaggctgatttatctaagttctttgttttggggccttcttttgtaatgctttagaaagtcttcaagtactttaaaatccattaggtattgatgggatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10251" stop="13269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10551" g_stop="10984" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="0.92"/>
            <acceptor a_prob="0.983" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="12969" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="628" r_length="197" r_score="0.859"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E582732" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10551" e_stop="10984"/>
          <exon e_start="12771" e_stop="12969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTT-TTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAG-AAGT-TTCAAGTACTTAAAATTCCATTAGGTATTGAT-GGATGT</genome_strand>
        <mrna_strand>TATTTTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTCTCTGAGTATAGGAAAAAATTTCAGCTGTCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGGTACGCCTCAAGCAAGAGGAAGAAACTCGATCCAATTGCTTGTTCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATGGGCCTTGAGGATATAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAACTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTTAGTTCCATGGTTG---AAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--TTTTGCCGATGTCTAACTTACATTTGACATGGTGCTTCTTATACTACTCGCCGGAAGGT--CGTTATGCAAGCA-TTTTGGAGAAAGCTTACTATAGCTCAGGCTGATTTATCTAAGTTCTTTGTTTTGGGGCCTTCTTTTGTA-ATGCTTTAGAAAGTCTTCAAGTACTTTAAAATCCATTAGGTATTGATGGGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372023" ref_strand="+" ref_description="SGN-E372023 [TUS-30-O18](-)">
      <seq>tggatggttacaggaaggcattgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgtgtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaattcccgactgccctgcagatgaatgatttgctttgccaaatcttcagttccatggttgaaaaaatgcaggattttttgcagatgtttagcttacattcgacatggtgcttcttatattactcgccggaaggtggtgttatgcaagcatttttggagaaggcttactatagctcaggctggtttatctatgtttttgttttgtggccttctttgttatatgctttagaagtttcaagtacttaaaattccattaggtattgatggatgttagctctaatgtgattattattgcatagggatatgactttattttatgtgttagtttttggattttacaatagtacatataccatgtaatggtattgactaattcccctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10256" stop="13379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10556" g_stop="10984" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13087" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="746" r_length="317" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E372023" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10556" e_stop="10984"/>
          <exon e_start="12771" e_stop="13087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTACTCTTCAA</genome_strand>
        <mrna_strand>TGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGTGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245204" ref_strand="+" ref_description="SGN-E245204 [cLEF-13-N15]">
      <seq>ttgaaggaaacccagaaacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaattcccgactgccctgcagatgaatgatttgctttgccaaatcttcagttccatggttgaaaaaatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10276" stop="11283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10576" g_stop="10983" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E245204" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10576" e_stop="10983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCA</genome_strand>
        <mrna_strand>TTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374888" ref_strand="+" ref_description="SGN-E374888 [TUS-15-O9](-)">
      <seq>aacagttttctgagtataggaagaaattccagctgcctgaagaaccatactacaaagatgctggtcctggaggtctaatgttgagctctgctgaaatggaaaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaattcccgactgccctgcagatgaatgatttgctttgccaaatcttcagttccatggttgaaaaaatgcaggattttttgcagatgtttagcttacattcgacatggtgcttcttatattactcgccggaaggtggtgttatgcaagcatttttggagaaggcttactatagctcaggctggtttatttatgtttttgttttgtggccttttttgttatatgctttagaagtttcaagtacttaaaattccattaggtattgatggatgttagctttaatgtgattattattgcatagggatatgactttattttatgtgttagtttttggattttacaatagtacatataccatgtaatggtattgactaattcccctaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10292" stop="13379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10592" g_stop="10984" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13079" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="702" r_length="309" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="703" polyA_stop="723"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E374888" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10592" e_stop="10984"/>
          <exon e_start="12771" e_stop="13079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTA</genome_strand>
        <mrna_strand>AACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATTTATGTTTTTGTTTTGTGGCCTTTTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTTTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241762" ref_strand="+" ref_description="SGN-E241762 [cLEE-10-A3]">
      <seq>aaagctacgcctcaagcaagaggaagaatttcgatccaattgcttgatcttggaacaaaaagcaaaagaagcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaattcccgactgccctgcagatgaatgatttgctttgccaaatcttcagttccatggttgaaaaaatgcaggattttttgcagatgtttagcttacattcgacatggtgcttcttatattactcgccggaaggtggtgttatgcaagcatttttggagaaggcttactatagctcaggctggtttatctatgtttttgttttgcggccttctttgttatatgctttagaagtttcaagtacttaaaattccattaggtattgatggatgttagctctaatgtgattattattgcatagggatatgactttattttatgtgttagtttttggattttacaatagtacatataccatgtaatggtattgactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10392" stop="13371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10692" g_stop="10984" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13079" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="602" r_length="309" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E241762" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10692" e_stop="10984"/>
          <exon e_start="12771" e_stop="13079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTA</genome_strand>
        <mrna_strand>AAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGCGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241794" ref_strand="+" ref_description="SGN-E241794 [cLEE-10-O9]">
      <seq>tcttggaacaaaaagcaaaagacgcagaggaagaatatgctggtcagtttgagaattttatgggtaaggttcagatgctggataagaggttgataggccttgaggatgtagtgaaggacctcagaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaattcccgactgccctgcagatgaatgatttgctttgccaaatcttcagttccatggttgaaaaaatgcaggattttttgcagatgtttagcttacattcgacatggtgcttcttatattactcgccggaaggtggtgttatgcaagcatttttggagaaggcttactatagctcaggctggtttatctatgtttttgttttgtggccttctttgttatatgctttagaagtttcaagtacttaaaattccattaagtattgatggatgttagctctaatgtgattattattgcatagggatatgactttattttattgtgttagtttttggatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10439" stop="13336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10739" g_stop="10984" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13036" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="513" r_length="267" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E241794" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241794" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10739" e_stop="10984"/>
          <exon e_start="12771" e_stop="13036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTA-TGTGTTAGTTTTTGGATTTTA</genome_strand>
        <mrna_strand>TCTTGGAACAAAAAGCAAAAGACGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAAGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATTGTGTTAGTTTTTGGATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620316" ref_strand="+" ref_description="SGN-E620316 [71016]">
      <seq>gaactagtggatcccccgccgctgcagttnaaacatgagtccaaaaagtaaagttccagaaagtgaggataaaatttcagaaactcccgactgccccgcagnatgaatgatttgctttgccaaatcttcagttccatggttgaaatgcaggattttgcagatgtttaacttacatttgacatggtgcttcttgtaatactcgccggaaggtggttatgcaagcattttggagaaggcttactatagctcaggctgatttatctaagtttttgttttggggccttctttgtaatgctttaaaagtctcaagtacttaaaattccattagggtattgatggatgtaactctaatgtgattattgcatagggatgtgactttattttatgtattagtttttggatttacaatagtatatatataccatgtaatggtattgacttttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="10563" stop="13369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10863" g_stop="10984" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="150" r_length="120" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786">
            <donor d_prob="0.968" d_score="0.94"/>
            <acceptor a_prob="0.983" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12771" g_stop="13070" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="441" r_length="291" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="444" polyA_stop="455"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E620316" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E620316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10863" e_stop="10984"/>
          <exon e_start="12771" e_stop="13070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAG-ATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAGGTAAATGCAAACTAATGGTGCTCTATGTTGTCTTCTACATTGTCATGTATGGTTATCTCCATGTCCCCATCCTCTGCTTTGCAATGATGCCTTATTTCAATATATTCAATCTCTGAAGGTCTTCTTTTGTTGCATTGTTTACCTTTCCTATTATATGTTGGTCTGTTTTTTCATCATTTTCTTTCACTCACCACTTTTATATTACAGTTTACATGATTATTTCAATTAGGGTAAAATATTTAGTCACTACGGATGTTGCGCAATTTGAAATTGAGTATATAAAGAGAAGGAACAGTAAAGACTTGGAAATCAGATATTTCAAAATAAATTATTGGAATATTGGAACATATTTAATTATCTAGGATACATGGCCTACTCTGACTTGCATAGAGATGTCGAGGAGAAAGCTGAATAGAGTATGGTATTGTTATTTAGGATACAAGTGTTAAAACGTCACTTCAAGATCTAAAATGGAAGAATGCATAGTTGAACATGGATTAAATTGAATATTAAACTAATAGAAAGCAAATTTTTATGGTTAGAGTAGGAGATAATTCCAATTAAGTTAATGTGTCTCATTGTTTTTGGACTAGCTAAAATGGAAAGGTCATTGTGGACAGATATTGCTTGCTACAGATGTAGTTTTTCTGAGGTTCTGCATGAGACATAACTTATTTGTTGGGCTTTTGCTCTACCATTTCCTTGTTTACCTCATCCTTCAAGTGACTACATTCGAGTGGATCTAGGCTCAGTTACTATTTCAACCCAGTCTCCCTTCATTCAACTAAGCCATGCCTACTATCTTTACAATCTCGGACCTGTACTTTGCTCTTTATTTAGGGTGAAATGTGCACTTTGTTGATGCAAAGTTTTTAAGTTATATGCATCAATTTTAACGTCCTTTTGTTTCTCTCCTTTTATTTGTATTTTAATTTTCAGTTCTTCTATTGTTGATGCTCGCTATCTGATTTTGCATTATCATTTGGGAACTCTTTATCTTTTGGAGATTCTGATATAGGATATATAAAGCACCAAAAAGATATCTTCAAGATTTTCAAATAGGGGTATGACTTGTCCTGCATTCTGTATCTATAGTACGGGAATGAACTGTATTGTATTGGCCAATTCTCTTTGCTAAATTGAAAATTGGTTTTCTGCTGTATGATTTTGCTTTCTCGTCATGGAGCTGTCTTTCATTTTACATCTTAACCTTCTACATTATGAAAAATGTTTAGGATAATAAGAGAATCAACAACATAACAGCCGTCACTTATTGCCAAATAGATTTTGAAAGAGAACGTCTTAGTTGTGACCATAATGTCTTATTTCTGTATCACCTCCAACAAAGAAAAGGAAGATAGAATACATCTAGTCTGTCACTTTTCCTCTCGGTGTTCAGTGATAAAATGTCTATGAAGTGTGTGTATATTATCAATGAAATATTCGAAATTATACTTTATTCTGCAGTCCTTAGTAATAATGCAGATTTGCATATCTCTAAACCATACTTATGCCTGCTAATGCTTATAAGCTCAAACTAGAACTGATGTTACCACGATGGATATGTACAGCAACATTTTTAGTAAAAGTGTTTTCTTATTGTTTGGGGATACATCGCAAAAAATAAAAAAGTTGCCGACTTAACTTTTCCACGAGAAAGATCATCGACCTTAAGCATTGTCTGCATACTTCCGAGTAGACCTGTTTTGATGTTCCCTAAAGCTTGTTATCATCTGCATAACCTGCTTATCTATATATCTAATATATTTTTCTTACGACAATGCAGGATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTA-GGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAG--TACATATACCATGTAATGGTATTGACTA</genome_strand>
        <mrna_strand>AAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAACTCCCGACTGCCCCGCAGNATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTG---AAATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--TTTTGCAGATGTTTAACTTACATTTGACATGGTGCTTCTTGTAATACTCGCCGGAAGGT-G-GTTATGCAAGCA-TTTTGGAGAAGGCTTACTATAGCTCAGGCTGATTTATCTAAGTTTTTGTTTTGGGGCCTTCTTTG-TA-ATGCTTTAAAAGTCTCAAGTACTTAAAATTCCATTAGGGTATTGATGGATG-TAACTCTAATGTG---ATTATTGCATAGGGATGTGACTTTATTTTATGTATTAGTTTTTGGA-TTTACAATAGTATATATATACCATGTAATGGTATTGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220328" ref_strand="-" ref_description="SGN-E220328 [cLEL-12-I20](-)">
      <seq>ttttttttttatttttttagtcaataccattacatggtataggtactattgtaaaatccaaaaactaacacataaaataaagtcatatccctatgcaataataatcacattagagctaacatccatcaatacctaatggaattttaagtacttgaaacttctaaagcatataacaaagaaggccacaaaacaaaaacatagataaaccagcctgagctatagtaagtcttctccaaaaatgcttgcataacaccaccttccggtgagttatattaagaagcacctatgtcaatgtaagctaaacatctgcaaaaaatcctgcattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="19058" stop="12462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14451" g_stop="14437" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14436" i_stop="13073" i_length="1364">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13072" g_stop="12761" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="328" r_length="313" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E220328" ref_strand="-">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220328" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14451" e_stop="14437"/>
          <exon e_start="13072" e_stop="12761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTTATCTTGTATTATTTTTTGTAAATGTAAATATTTCTTTCATTTTATTATTGTATTTGAAATCTGAGTTTCGAATTAGTTGAAATCGATTATACGAATTTTTACTATTCATTCTAATGTTACATAGCAATTTTTTATTTAATACTTGTTGTTATGTTGAGATTCTTCTGTAAGATTATCAAATTTAAAACAGTAAAAGATTCTTTTCCCTCTAAATTATTCACAAAAATTTGAATATAACTACAGTTTGTATTCATAGTCAAACACTACTCAAATTTTCAAATATATGCATGTCATGTGTTTAAATTTATAGTTCAATTTACTTAACCATTATAATTAACATATGTTTTATTTTATTAAATCACATAATAATGAAAATTACATTAATTTGATATAAACACTCGGTGTGAATAAGTATTCTTCGTATTTTTTGCTTTTATTATGATCCACTCTTAATATGCAATTAAATACTCTCTCAATTTCATTTTAGTTATCGTTTTAACTTTTTCTATGCTTATAAAAGAAAAGTGATAATACAAGATATAGTTTAAAGTGACGATTAAAGTGAGACTAAAGGAGTACGATATTTAATATAACATTTTTATTAACCTCCATGAATATTAAATTTTAAATTCATAATTAAAAATTCAGTGAGTTAAATATTATATAGTGATAATTTCCATGTTTGTAGTCAGTCATCAATTTGCCTTTGACTGTCAGTGAATAGTAACTGGGGCCAATAATATAAATATAGAAACAAAATAAAAGTTAAAAAAAGTATTGCAAAAAAAAAAAGGATAAATTCTTTAAAGCCAAAAATGTACAAAATAAAGTTTTTCATAAAGTTGAGTAAGCAACATGCACATTAAATTATGCATATAATTCAGCTGAAATTTATAGTTTGAGCTAAAAATTGGAACTACTCCATTTAATACAACAAATAATAATAATTCAACTTTCAGATTTGTCATTCTATGAAAAGCACATGCTATGTTGAATTTCCATCACAATTATTAAAAAATCAATGCATCGAAATTACTTTATCCTTAATTGAATTTCGAGTTAGAGAATCGAAAATAAAAAACCTTTCGATAATAAATGGTGTACCCATCTTAGTAGTCCAACCAATGCGACACTAAAAAAAGTTGTACCATTAATATTTGGATAATAACATACCTAATATAATCTCAGAAGTAAAGGTCTAAAGAGACTAAAGTGGCCCAAAAAGTGTATTTTCAGATGAAACTCGTAAACATATCTTACCCCTACAGTTATAGAGTAGAGAGATTGTTTTCGATAGACAATGTCTGATGTTGTAAATAACCAGATATCATGTCCAAGGAAAAATGGACCAAGCTTGAAGAGTAGGGGAATTAGTCAATACCATTACATGGTATATGTACTATTGTAAAATCCAAAAACTAACACATAAAATAAAGTCATATCCCTATGCAATAATAATCACATTAGAGCTAACATCCATCAATACCTAATGGAATTTTAAGTACTTGAAACTTCTAAAGCATATAACAAAGAAGGCCACAAAACAAAAACATAGATAAACCAGCCTGAGCTATAGTAAGCCTTCTCCAAAAATGCTTGCATAACACCACCTTCCGGCGAGTAATA-TAAGAAGCACC-ATGTCGAATGTAAGCTAAACATCTGCAAAAAATCCTGCATTGTC</genome_strand>
        <mrna_strand>TTTTTTTTTTATTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAATACCATTACATGGTATAGGTACTATTGTAAAATCCAAAAACTAACACATAAAATAAAGTCATATCCCTATGCAATAATAATCACATTAGAGCTAACATCCATCAATACCTAATGGAATTTTAAGTACTTGAAACTTCTAAAGCATATAACAAAGAAGGCCACAAAACAAAAACATAGATAAACCAGCCTGAGCTATAGTAAGTCTTCTCCAAAAATGCTTGCATAACACCACCTTCCGGTGAGTTATATTAAGAAGCACCTATGTC-AATGTAAGCTAAACATCTGCAAAAAATCCTGCATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548070" ref_strand="+" ref_description="SGN-E548070 [TUS-57-M17](-)">
      <seq>aagtttcagtattatcaccaagagttgcatttttggcccatcaacgtttggttctaaatgttgataatagtgttcttaagcaaagaattgcagctcttgcccaagataaaatatttaaagatgctcatcaagaagcattgaagagagaaatagagaggttaagggaaatatattaccaacagaacttaaagaagatggaaaatgatgatgatgataatgatcattcaataaagatacaacaagatgttaatggctctgagaagaaagaacagcttgtcaactgatcattttttcagctataggataaaaagaatgtagcttgaggagaagcactaagcagattcatgtggtatttggacctaccaagaaagtttcttattatggaggggacaaagataaggtcacttgaattcttgcattgatcactcaatttctaggggtccatataaacagtttaaattgttttttttttcttagggatgggtgtcttattatttttatttttcaataattaattttctctatttttttaattaaaaaaaatatttctatgaactactttcaaaaatttttattgttggaagggggcatgtggagttctttgtattgaagattgtgacttgtcagttagctgtttgatgtcagggttatggcactttttttttaatcagtgtcttttcttgtgagtggttgttattttttttttatcttgtattattttttgtaaatgtaaatatttctttcattttattgtatttgaaatctgagtttcgaattaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="16938" stop="14067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16638" g_stop="16516" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16094" g_stop="15916" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="302" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15915" i_stop="14847" i_length="1069">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14846" g_stop="14367" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="778" r_length="476" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="779" polyA_stop="792"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E548070" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16638" e_stop="16516"/>
          <exon e_start="16094" e_stop="15916"/>
          <exon e_start="14846" e_stop="14367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATGGTAAAATTATACTTCTTTTTCACTCAACTATATATTATAATAATAAATATATATATGTAGCTTCTTTTGTACTCTTCATTAATTATTTTAATACATCAATTAGTCCTAATTCTACATGTATATTTTAAAAAGTAGTGGTAGTAGTTTTCAATATGTATAGTCAAAGTATAATTTTTCGATAAAAAAGATGTTTAACTGATAGTTATTATTCTTGATTGTTGAATATAATGTTACGTTTTTCATTATTAGAAAACATGAAATTAATTAGCTAAAATTTATTGGTAATCTCCCGCTAAATAGCTTGTAGCTAATTGAATTTTCGTATAATTCGAAATTAACATGTGTTTTTTATTGTTAGTTCAGTTACGAAATTTTGTTCATCCCTAATTTTTTATATATTTTTTTTTGTGTGGGAATATAGCTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAGGTACACTTTTTGTTGTTATTTCATGTTATCGTTAGTGGCGAAGTCAGAAAATTTATCAAAAGGTGCTAGCTAATACTTATTTAACTTCTACGATAATAACAATAACAACATATCTTATAAAATTTGAAATCGGAGATGATAGAATATATTCAGACCTTATTTTTATAGAAAGATTGTTTCAACATTTAACCTATATATGTATACTACATAATTTTCTGGTAAAGAATGTGCGTCTCACCACCCTTCGCCTAAGATAGGCTTTTATCCATGGTTACCCTCAACAATTCAATGTGATGGATGAGTTTCTCTTCGCTCTTAATTAACCCATGACCTCAAGTTTGAGCTCTCTAGAAATAGAAAAATTTATCATAAATAATATAAATCTAAATTAATCAGATCTAATAAAAAAAAAATACTTACCATGTTGTTGAGAATAGCAATAAATAGTAGGGGTGGGAGGGTGGGGGAGGGGGACCAAAATTGGTACCAACAAATAGTAATGTCATAATTAATAGTATATAATAGTAATAAAGATACCAATGATGGTCAATCCTAATCTATGAAATAATTGTAGATGACTCTACCTTATGGAAAACAATAATTTCAATGAAAAGAAAGATTTTTATATCTTATTTTAATATTCTCTTCGTCTAGTATTATTTGTCATAGTTTGTATATTTAGAATCAAATTAAAAAAAAAAATTGACTAGCATTTTAAAATGTATTTTTTCGTCATATTAATATGCAAAAAATTGCAATTTATAGTACTTTTCATATAGTTTTAGAATATCTAATTTTTTTGTTTAAAATATAAAATTAATACGATTTAATTTAACTTTGAAAATTAATCAAATTGACTTTCGAAAAACGTAACATGACAAACAATATCGGACGGAAGGAGTACTAACTAATGCATAAGAAGAGAAGTAGTAGAATAATCATAAAGTCATCTAATATATGTCATAAGTTTAAGTCATAAAATTAGTTATATTACGATAAATTGTCGGTATTACATTTTTGAAGATGCGATCCTTCTCCGAACCCTAATTGCCCCATTATTTGTATACAGGATAAAAAGAATGTAGCTTGAGGAGAAGCACTAAGCAGATTCATGTGGTATTTGGACCTACCAAGAAAGTTTCTTATTATGGAGGGGACAAAGATAAGGTCACTTGAATTCTTGCATTGATCACTCAATTTCTAGGGGTCCATATAAACAGTTTAAATTGTTTTTTTTTTTCTTAGGGATGGGTGTCTTATTATTTTTATTTTTCAATAATTAATTTTCTCTATTTTTTTAATTAAAAAAAATATTTCTATGAACTACTTTCAAAAATTTTTATTGTTGGAAGGGGGCATGTGGAGTTCTTTGTATTGAAGATTGTGACTTGTCAGTTAGCTGTTTGATGTCAGGGTTATGGCACTTTTTTTTTAATCAGTGTCTTTTCTTGTGAGTGGTTGTTATTTTTTTTTTATCTTGTATTATTTTTTGTAAATGTAAATATTTCTTTCATTTTATTATTGTATTTGAAATCTGAGTTTCGAATTA</genome_strand>
        <mrna_strand>AAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGCCCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAGAATGTAGCTTGAGGAGAAGCACTAAGCAGATTCATGTGGTATTTGGACCTACCAAGAAAGTTTCTTATTATGGAGGGGACAAAGATAAGGTCACTTGAATTCTTGCATTGATCACTCAATTTCTAGGGGTCCATATAAACAGTTTAAATTG-TTTTTTTTTTCTTAGGGATGGGTGTCTTATTATTTTTATTTTTCAATAATTAATTTTCTCTATTTTTTTAATTAAAAAAAATATTTCTATGAACTACTTTCAAAAATTTTTATTGTTGGAAGGGGGCATGTGGAGTTCTTTGTATTGAAGATTGTGACTTGTCAGTTAGCTGTTTGATGTCAGGGTTATGGCACTTTTTTTTTAATCAGTGTCTTTTCTTGTGAGTGGTTGTTATTTTTTTTTTATCTTGTATTATTTTTTGTAAATGTAAATATTTCTTTCA--TT-TTATTGTATTTGAAATCTGAGTTTCGAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271699" ref_strand="+" ref_description="SGN-E271699 [cLEM-23-N15]">
      <seq>tgatcatgatgatcatgttgataattctagcgaaaaaatcatcgatccaaagagaattaaaaggattttggcaaatagacaatcagcacaaaggtcaagggtgagaaaattacagtacatatcggagctagaacgtagcgttactacacttcaagctgaagtttcagtattatcaccaagagttgcatttttggaccatcaacgtttggttctaaatgttgataatagtgttcttaagcaaagaattgcagctcttgcccaagataaaatatttaaagatgctcatcaagaagcattgaagagagaaatagagaggttaagggaaatatattaccaacagaacttaaagaagatggaaaatgatgatgatgataatgatcattcaataaagatacaacaagatgttaatggctctgagaagaaagaacagcttgtcaactgatcattttttcagctataggataaaaagaatgtagcttgaggagaagcactaagcagattcatgtggtatttggacctaccaagaaagtttcttattatggaggggacaaagataaggtcacttgaattcttgcattgatcactcaatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="17728" stop="14414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17428" g_stop="17366" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17365" i_stop="16831" i_length="535">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16830" g_stop="16740" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="154" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16739" i_stop="16643" i_length="97">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16642" g_stop="16516" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="281" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16094" g_stop="15916" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="460" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15915" i_stop="14847" i_length="1069">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14846" g_stop="14714" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="593" r_length="133" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E271699" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17428" e_stop="17366"/>
          <exon e_start="16830" e_stop="16740"/>
          <exon e_start="16642" e_stop="16516"/>
          <exon e_start="16094" e_stop="15916"/>
          <exon e_start="14846" e_stop="14714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAGGTAAAATCATTCCTGTAGTTAACAGTTGATTTTTCATATACTCACTCGACTATAGTGATAGTAAGAATTAGTCTATAATGATAGTACAAGTATTAACTTAGTTGCTTTTACATAAATCTTACTCCCCATCTGTCTCAATTTATATGATATATTTTATGTTGGGAGAGTTAAACAGTTAAAGTTTGATTCAAAATTTGTGCATGGAATCTTCAATTTTTTTGAAATGAAATTTATATATTTATAAATCACGTAAAAAATACTATAAGTTGCGATAATTAAAAATCTAAAATGCTTATAAGATCGATGAAAAATTTACGGTCAAAGGTAGACTTGTTTGACTCTTGAAACTCGAAAGATGACATATAAAATAGAACGGAGGTGGTAATTCATTAATACAATACCAATATTATTTGATTCCGAGCTCAGAGCAATTTAGTGCACACTATACTACAATGTGTAAGAAAATTGTAGAATTTATATAATTATTTGGTAATAATAATGATATTTTTGTTTTGAATTATTGGTTTTAATATAGGATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAAGTAAGCAAAATAAAATTTTATTTTTTATATAGTAATTAATGAGATTAAAAGTTGTTTAATTTTTGTTAATTAATTAATTTATTTTGGTTCTATGAAGGCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATGGTAAAATTATACTTCTTTTTCACTCAACTATATATTATAATAATAAATATATATATGTAGCTTCTTTTGTACTCTTCATTAATTATTTTAATACATCAATTAGTCCTAATTCTACATGTATATTTTAAAAAGTAGTGGTAGTAGTTTTCAATATGTATAGTCAAAGTATAATTTTTCGATAAAAAAGATGTTTAACTGATAGTTATTATTCTTGATTGTTGAATATAATGTTACGTTTTTCATTATTAGAAAACATGAAATTAATTAGCTAAAATTTATTGGTAATCTCCCGCTAAATAGCTTGTAGCTAATTGAATTTTCGTATAATTCGAAATTAACATGTGTTTTTTATTGTTAGTTCAGTTACGAAATTTTGTTCATCCCTAATTTTTTATATATTTTTTTTTGTGTGGGAATATAGCTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAGGTACACTTTTTGTTGTTATTTCATGTTATCGTTAGTGGCGAAGTCAGAAAATTTATCAAAAGGTGCTAGCTAATACTTATTTAACTTCTACGATAATAACAATAACAACATATCTTATAAAATTTGAAATCGGAGATGATAGAATATATTCAGACCTTATTTTTATAGAAAGATTGTTTCAACATTTAACCTATATATGTATACTACATAATTTTCTGGTAAAGAATGTGCGTCTCACCACCCTTCGCCTAAGATAGGCTTTTATCCATGGTTACCCTCAACAATTCAATGTGATGGATGAGTTTCTCTTCGCTCTTAATTAACCCATGACCTCAAGTTTGAGCTCTCTAGAAATAGAAAAATTTATCATAAATAATATAAATCTAAATTAATCAGATCTAATAAAAAAAAAATACTTACCATGTTGTTGAGAATAGCAATAAATAGTAGGGGTGGGAGGGTGGGGGAGGGGGACCAAAATTGGTACCAACAAATAGTAATGTCATAATTAATAGTATATAATAGTAATAAAGATACCAATGATGGTCAATCCTAATCTATGAAATAATTGTAGATGACTCTACCTTATGGAAAACAATAATTTCAATGAAAAGAAAGATTTTTATATCTTATTTTAATATTCTCTTCGTCTAGTATTATTTGTCATAGTTTGTATATTTAGAATCAAATTAAAAAAAAAAATTGACTAGCATTTTAAAATGTATTTTTTCGTCATATTAATATGCAAAAAATTGCAATTTATAGTACTTTTCATATAGTTTTAGAATATCTAATTTTTTTGTTTAAAATATAAAATTAATACGATTTAATTTAACTTTGAAAATTAATCAAATTGACTTTCGAAAAACGTAACATGACAAACAATATCGGACGGAAGGAGTACTAACTAATGCATAAGAAGAGAAGTAGTAGAATAATCATAAAGTCATCTAATATATGTCATAAGTTTAAGTCATAAAATTAGTTATATTACGATAAATTGTCGGTATTACATTTTTGAAGATGCGATCCTTCTCCGAACCCTAATTGCCCCATTATTTGTATACAGGATAAAAAGAATGTAGCTTGAGGAGAAGCACTAAGCAGATTCATGTGGTATTTGGACCTACCAAGAAAGTTTCTTATTATGGAGGGGACAAAGATAAGGTCACTTGAATTCTTGCATTGATCACTCAATTTCT</genome_strand>
        <mrna_strand>TGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAA.................................................................................................GCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAGAATGTAGCTTGAGGAGAAGCACTAAGCAGATTCATGTGGTATTTGGACCTACCAAGAAAGTTTCTTATTATGGAGGGGACAAAGATAAGGTCACTTGAATTCTTGCATTGATCACTCAATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700035" ref_strand="+" ref_description="SGN-E700035 [FA11DG01]">
      <seq>ccaatatccattagcgattcgatcgcgtttctcgaagcacctatggttgaagaatgccgaattattaggctatcgagttccggtactcgcacggaattcgatcgattcgacgatgaccaacttatgtcgatgtttaatgatgaagacactgcaaataataacgaacaaaactccattccttcgtccccatcggatcataacagtattaattacgaagaaaagaaattgatattacatgtagaggagcagcaacaacaactgaagattgaacctgaagaagttgaaagttcatgcaaatctgataatgaacaaaatgctgctgctgatcatgatgatcatgttgataattctagcgaaaaaatcatcgatccaaagagaattaaaaggattttggcaaatagacaatcagcacaaaggtcaagggtgagaaaattacagtacatatcggagctagaacgtagcgttactacacttcaagctgaagtttcagtattatcaccaagagttgcatttttggaccatcaacgtttggttctaaatgttgataatagtgttcttaagcaaagaattgcagctcttgcccaagataaaatatttaaagatgctcatcaagaagcattgaagagagaaatagagaggttaagggaaatatattaccaacagaacttaaagaagatggaaaatgatgatgatgataatgatcattcaataaagatacaacaagatgttaatggctctgagaagaaagaacagcttgtcaactgatcattttttcagctataggtacactttttgttgttatttcatgttatcgttagtggcgaagtccgaaaatttatcaaaaggtgctagctaatactattttacttctacgataataaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="18051" stop="15513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17751" g_stop="17366" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17365" i_stop="16831" i_length="535">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16830" g_stop="16740" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="477" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16739" i_stop="16643" i_length="97">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16642" g_stop="16516" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="604" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16094" g_stop="15813" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="885" r_length="281" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E700035" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17751" e_stop="17366"/>
          <exon e_start="16830" e_stop="16740"/>
          <exon e_start="16642" e_stop="16516"/>
          <exon e_start="16094" e_stop="15813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGATCCATTAGCGATTCGATCGCGTTTCTCGAAGCACCTATGGTTGAAGAATGCCGAATTATTAGGCTATCGAGTTCCGGTACTCGCACGGAATTCGATCGATTCGACGATGACCAACTTATGTCGATGTTTAATGATGAAGACACTGCAAATAATAACGAACGAAACTCCATTCCTTCGTCCCCATCGGATCATAACAGTATTAATTACGAAGAAAAGAAATTGATATTACATGTAGAGGAGCAGCAACAACAACTGAAGATTGAACCTGAAGAAGTTGAAAGTTCATGCAAATCTGATAATGAACAAAATGCTGCTGCTGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAGGTAAAATCATTCCTGTAGTTAACAGTTGATTTTTCATATACTCACTCGACTATAGTGATAGTAAGAATTAGTCTATAATGATAGTACAAGTATTAACTTAGTTGCTTTTACATAAATCTTACTCCCCATCTGTCTCAATTTATATGATATATTTTATGTTGGGAGAGTTAAACAGTTAAAGTTTGATTCAAAATTTGTGCATGGAATCTTCAATTTTTTTGAAATGAAATTTATATATTTATAAATCACGTAAAAAATACTATAAGTTGCGATAATTAAAAATCTAAAATGCTTATAAGATCGATGAAAAATTTACGGTCAAAGGTAGACTTGTTTGACTCTTGAAACTCGAAAGATGACATATAAAATAGAACGGAGGTGGTAATTCATTAATACAATACCAATATTATTTGATTCCGAGCTCAGAGCAATTTAGTGCACACTATACTACAATGTGTAAGAAAATTGTAGAATTTATATAATTATTTGGTAATAATAATGATATTTTTGTTTTGAATTATTGGTTTTAATATAGGATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAAGTAAGCAAAATAAAATTTTATTTTTTATATAGTAATTAATGAGATTAAAAGTTGTTTAATTTTTGTTAATTAATTAATTTATTTTGGTTCTATGAAGGCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATGGTAAAATTATACTTCTTTTTCACTCAACTATATATTATAATAATAAATATATATATGTAGCTTCTTTTGTACTCTTCATTAATTATTTTAATACATCAATTAGTCCTAATTCTACATGTATATTTTAAAAAGTAGTGGTAGTAGTTTTCAATATGTATAGTCAAAGTATAATTTTTCGATAAAAAAGATGTTTAACTGATAGTTATTATTCTTGATTGTTGAATATAATGTTACGTTTTTCATTATTAGAAAACATGAAATTAATTAGCTAAAATTTATTGGTAATCTCCCGCTAAATAGCTTGTAGCTAATTGAATTTTCGTATAATTCGAAATTAACATGTGTTTTTTATTGTTAGTTCAGTTACGAAATTTTGTTCATCCCTAATTTTTTATATATTTTTTTTTGTGTGGGAATATAGCTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAGGTACACTTTTTGTTGTTATTTCATGTTATCGTTAGTGGCGAAGTCAGAAAATTTATCAAAAGGTGCTAGCTAATACTTATTTAACTTCTACGATAATAACAAT</genome_strand>
        <mrna_strand>CCAATATCCATTAGCGATTCGATCGCGTTTCTCGAAGCACCTATGGTTGAAGAATGCCGAATTATTAGGCTATCGAGTTCCGGTACTCGCACGGAATTCGATCGATTCGACGATGACCAACTTATGTCGATGTTTAATGATGAAGACACTGCAAATAATAACGAACAAAACTCCATTCCTTCGTCCCCATCGGATCATAACAGTATTAATTACGAAGAAAAGAAATTGATATTACATGTAGAGGAGCAGCAACAACAACTGAAGATTGAACCTGAAGAAGTTGAAAGTTCATGCAAATCTGATAATGAACAAAATGCTGCTGCTGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAA.................................................................................................GCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAGGTACACTTTTTGTTGTTATTTCATGTTATCGTTAGTGGCGAAGTCCGAAAATTTATCAAAAGGTGCTAGCTAATAC-TATTTTACTTCTACGATAATAACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272928" ref_strand="+" ref_description="SGN-E272928 [cLEM-25-H16]">
      <seq>catgatgatcatgttgataattctagcgaaaaaatcatcgatccaaggagaattaaaaggattttggcacatatacaatcaacacaaaggtcaggggtgagaaaattacagtacatatcggagctagaacgcagcgttactacacttcaagctgaagatccaatatcatcaccaagagtcgcatttttggaccatcaacggtcggatctaaatgtcgataatagtgctcttaagcaaagaattgcaactctcgcccaagataaaatatttaaagatgctcatcaagaagcattgtagagagaaatatagaggttaagggaaatatattaccaacagaacttaaagaagatggaaaatgatgatgatgataatgatcattcaataaagatacaacaagatgttagtggctctgacaagaaagaacagcttgtcaactgatcattttttcagctataggataaaaagaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="17724" stop="15611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17424" g_stop="17366" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17365" i_stop="16831" i_length="535">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16830" g_stop="16740" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="150" r_length="91" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16739" i_stop="16643" i_length="97">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16642" g_stop="16516" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="277" r_length="127" r_score="0.906"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16094" g_stop="15916" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="456" r_length="179" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E272928" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17424" e_stop="17366"/>
          <exon e_start="16830" e_stop="16740"/>
          <exon e_start="16642" e_stop="16516"/>
          <exon e_start="16094" e_stop="15916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAGGTAAAATCATTCCTGTAGTTAACAGTTGATTTTTCATATACTCACTCGACTATAGTGATAGTAAGAATTAGTCTATAATGATAGTACAAGTATTAACTTAGTTGCTTTTACATAAATCTTACTCCCCATCTGTCTCAATTTATATGATATATTTTATGTTGGGAGAGTTAAACAGTTAAAGTTTGATTCAAAATTTGTGCATGGAATCTTCAATTTTTTTGAAATGAAATTTATATATTTATAAATCACGTAAAAAATACTATAAGTTGCGATAATTAAAAATCTAAAATGCTTATAAGATCGATGAAAAATTTACGGTCAAAGGTAGACTTGTTTGACTCTTGAAACTCGAAAGATGACATATAAAATAGAACGGAGGTGGTAATTCATTAATACAATACCAATATTATTTGATTCCGAGCTCAGAGCAATTTAGTGCACACTATACTACAATGTGTAAGAAAATTGTAGAATTTATATAATTATTTGGTAATAATAATGATATTTTTGTTTTGAATTATTGGTTTTAATATAGGATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAAGTAAGCAAAATAAAATTTTATTTTTTATATAGTAATTAATGAGATTAAAAGTTGTTTAATTTTTGTTAATTAATTAATTTATTTTGGTTCTATGAAGGCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATGGTAAAATTATACTTCTTTTTCACTCAACTATATATTATAATAATAAATATATATATGTAGCTTCTTTTGTACTCTTCATTAATTATTTTAATACATCAATTAGTCCTAATTCTACATGTATATTTTAAAAAGTAGTGGTAGTAGTTTTCAATATGTATAGTCAAAGTATAATTTTTCGATAAAAAAGATGTTTAACTGATAGTTATTATTCTTGATTGTTGAATATAATGTTACGTTTTTCATTATTAGAAAACATGAAATTAATTAGCTAAAATTTATTGGTAATCTCCCGCTAAATAGCTTGTAGCTAATTGAATTTTCGTATAATTCGAAATTAACATGTGTTTTTTATTGTTAGTTCAGTTACGAAATTTTGTTCATCCCTAATTTTTTATATATTTTTTTTTGTGTGGGAATATAGCTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAG</genome_strand>
        <mrna_strand>CATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAGGAGAATTAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTGGCACATATACAATCAACACAAAGGTCAGGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGCAGCGTTACTACACTTCAA.................................................................................................GCTGAAGATCCAATATCATCACCAAGAGTCGCATTTTTGGACCATCAACGGTCGGATCTAAATGTCGATAATAGTGCTCTTAAGCAAAGAATTGCAACTCTCGCCCAAGATAAAATATTTAAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCAAGAAGCATTGTAGAGAGAAATATAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAGTGGCTCTGACAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="-" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>ctatctcgctatatacacaaaaaaaaataaattctgtttttattttgtataaagcgagagaaaattgtatatacacatgtaaaaatatatatcttcgtgttatacacttaattatacaaattacaaacattttacttcaaatattgcagagaaaaaggccaacgaattatacaattgtgaattatataattgcagtgaaatacaattttctctaactttatacaacagaagtgtatatattgtgtttttgtttttgtataaagcgagacaaaaacatatatattcttgccatacacttataattatgcaatatacatacatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="20863" stop="19930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20589" g_stop="20449" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.872"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20448" i_stop="20416" i_length="33">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20415" g_stop="20230" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="325" r_length="186" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E393076" ref_strand="-">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="20589" e_stop="20449"/>
          <exon e_start="20415" e_stop="20230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCGCTTTATACACAGAAGTGTATAAATTGTACTTCTGTTTTGTATAAAGCAAGAGAAAATTGTATATATACACATGCAAAAACATATATCTTCGTGTTATACACTTAATTATACAATTTACAAACATTTTACTTCAATTCAATTGTAGACAAATGCAAATTTTATACAAAATATTACAGAGAAAAAGGTCAACAAATTATACAATTGTGAATTATACAATTGCAGTGAAATACAATTTGCTCTAGCTTTATACAACAGAAGTGTATATATTTTGTTTATGTTTTTGTATAAAGCGAGAGAAAAACATATATCTTCTTGCTATACACTTATAATTATGCAATATACATACATTTTA</genome_strand>
        <mrna_strand>CTATCTCGCTATATACACAAAAAAAAATAAATTCTGTTTTTATTTTGTATAAAGCGAGAGAAAATTG--TATATACACATGTAAAAATATATATCTTCGTGTTATACACTTAATTATACAAATTACAAACATTTTACTTCA.................................AATATTGCAGAGAAAAAGGCCAACGAATTATACAATTGTGAATTATATAATTGCAGTGAAATACAATTTTCTCTAACTTTATACAACAGAAGTGTATATATTGTGTTTTTGTTTTTGTATAAAGCGAGACAAAAACATATATATTCTTGCCATACACTTATAATTATGCAATATACATACATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392727" ref_strand="+" ref_description="SGN-E392727 [TUS-37-J5]">
      <seq>taatatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtcacgctttatacaaaatttaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="19930" stop="20682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20230" g_stop="20382" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E392727" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>153</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20230" e_stop="20382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCTCGCTTTATACAAAAACATAAACAAAATATATACACTTCTGTTGTATAAAGCTAGAGCAAATTGTATTTCACTGCAATTGTATAATTCACAATT</genome_strand>
        <mrna_strand>TAATATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCACGCTTTATACAAAATTTAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689252" ref_strand="+" ref_description="SGN-E689252 [t3_tus_80_L24]">
      <seq>ctcaatctatagcaattatgaagccatcttatattactttttcaaactttatgctattaatatttttaaccttatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcactaaacctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaaccaatacaagaacaaaaagacattaataatgttacgtcgtatgatatatccacattaccgattggtgtcgattggaggaaggatggggttgttacaccaatcaaggatcaaaaaagttgcggaagttgttgggcattttcagcagtagcagcaatagagggcatcaacaagatcaaaacaggaaaacttgtgtcactatcagaacaacaactaatggattgcgatgtttactcagacaatcaaggatgtaatggagggtttatggaaagtgcatttgattacataatggaaaatggtgggattacaacttcaaaaaattatccatacataggaaaaaaacaaaaatgtaacacaaaaaaagcaaaacaacatgaagttaggataagtaattatgaaaaggtaccaccaaatgaggaatcacttcaagttgcaattaacaaacaaccaatatcagtggctattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24148" stop="26795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24448" g_stop="24888" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24889" i_stop="26152" i_length="1264">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.715" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26153" g_stop="26495" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="785" r_length="343" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E689252" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>784</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689252" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24448" e_stop="24888"/>
          <exon e_start="26153" e_stop="26495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTC-AAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCGGTACGTAACAATCAACATAAAAATTATATTAAGAAAGCGTATTTGGGTAAGCTTATAATTTGAGGGGTACTTTTTAAAAAAAAATATTAAATGACTTTTTCACTTATTTTTCATCGAATTCAATTACTGAAAAAATATAACGTGGGGGATAAGTTCTCACCAAAAAAGTGTGAAACTTCCTAATTTTTCCATATGAAATAATTCGTACTATTTTTTCCCTTTCAGATCGATTCAATCAAAAAAGGAAAATTTACATAAATATACTATGATAAAAAAATATTTACCATTTATAGCAATAATAATTTTTTTCACTTGATCAGTTTTAATTCATTTATAATAAAAGTTTGATACATATTACAAAGAAAAATTTATTATTCACATATAATCAAGTTTTAATGATGGATAATACATTTTTCACACATTTTAATACATTTATAATATAATGTGTCAAATTTTTACCAAACAAACATAATATATTTCAAAAAATAATTATAATTCATATATATTGCATATATAATTCACCTTTGATTCATATTGCAGATTTTACATAATAATGCTATAAATGGTAATAAATAAAAAGAATTACTAAAATTAGTGATTATTTATAAAAATGTACCAATTTATGTAATTTTTTCATCAAAATACTAGCGGAAATAATTACACTAAACATTTAGCCATGGTTACACCATTCAATACCAACTAATAATTATTGTTAGTTTCATAACATCCATCCAAACATATACTCCTTCGTCCGTCAATTTTTAGTTGTCATGTTGTGTTTTTCAAAAGCCAGTTCGACTATTTTTCAAAGTTAAATTAGATTACATTAATTCTATATTTAAATATTGAAAAACTATACAAAAGTGTTATACATTGCAATTTTTTCATATTAATATGATGAAAAATAATCGTATTAGTCAAAGTTCTTATCGTTTGACTCTAAAAAAGAAAACCATGACAACTAAAGTAGACAGATAGAATAATTACTTGTTTCATTTATAAAATTAGATTATCAACTATTCTCGATCAGCTAATCCAAACGGGCCGGACTTTATCAGGGACATAACCAGCATGTCTTTTAGGGGGTTCATCCAAACCCCCTTCGGCGGGAAAATATTACTATACATACGTGGTTAAAATTATTTTTTAGATGTATAAAATAGATGTTGAACTCCCTTTGACTAGTTCATATGTTTGTTCTTTCCAATTTTGAACCCTCTTATTGAAAATTCTAGTTCCGCCACTAAGCTCTATTACAATGCAGGAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAGAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGA</genome_strand>
        <mrna_strand>CTCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAAAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390520" ref_strand="+" ref_description="SGN-E390520 [TUS-40-D9]">
      <seq>ctcaatctatagcaattatgaagccatcttatattactttttcaaactttatgctattaatatttttaaccttatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcactaaacctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaaccaatacaagaacaaaaagacattaataatgttacgtcgtatgatatatccacattaccgattggtgtcgattggaggaaggatggggttgttacaccaatcaaggatcaaaaaagttgcggaagttgttgggcattttcagcagtagcagcaatagagggcatcaacaagatcaaaacaggaaaacttgtgtcactatcagaaacaacaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24148" stop="26543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24448" g_stop="24888" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24889" i_stop="26152" i_length="1264">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.715" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26153" g_stop="26243" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="534" r_length="92" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E390520" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24448" e_stop="24888"/>
          <exon e_start="26153" e_stop="26243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTC-AAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCGGTACGTAACAATCAACATAAAAATTATATTAAGAAAGCGTATTTGGGTAAGCTTATAATTTGAGGGGTACTTTTTAAAAAAAAATATTAAATGACTTTTTCACTTATTTTTCATCGAATTCAATTACTGAAAAAATATAACGTGGGGGATAAGTTCTCACCAAAAAAGTGTGAAACTTCCTAATTTTTCCATATGAAATAATTCGTACTATTTTTTCCCTTTCAGATCGATTCAATCAAAAAAGGAAAATTTACATAAATATACTATGATAAAAAAATATTTACCATTTATAGCAATAATAATTTTTTTCACTTGATCAGTTTTAATTCATTTATAATAAAAGTTTGATACATATTACAAAGAAAAATTTATTATTCACATATAATCAAGTTTTAATGATGGATAATACATTTTTCACACATTTTAATACATTTATAATATAATGTGTCAAATTTTTACCAAACAAACATAATATATTTCAAAAAATAATTATAATTCATATATATTGCATATATAATTCACCTTTGATTCATATTGCAGATTTTACATAATAATGCTATAAATGGTAATAAATAAAAAGAATTACTAAAATTAGTGATTATTTATAAAAATGTACCAATTTATGTAATTTTTTCATCAAAATACTAGCGGAAATAATTACACTAAACATTTAGCCATGGTTACACCATTCAATACCAACTAATAATTATTGTTAGTTTCATAACATCCATCCAAACATATACTCCTTCGTCCGTCAATTTTTAGTTGTCATGTTGTGTTTTTCAAAAGCCAGTTCGACTATTTTTCAAAGTTAAATTAGATTACATTAATTCTATATTTAAATATTGAAAAACTATACAAAAGTGTTATACATTGCAATTTTTTCATATTAATATGATGAAAAATAATCGTATTAGTCAAAGTTCTTATCGTTTGACTCTAAAAAAGAAAACCATGACAACTAAAGTAGACAGATAGAATAATTACTTGTTTCATTTATAAAATTAGATTATCAACTATTCTCGATCAGCTAATCCAAACGGGCCGGACTTTATCAGGGACATAACCAGCATGTCTTTTAGGGGGTTCATCCAAACCCCCTTCGGCGGGAAAATATTACTATACATACGTGGTTAAAATTATTTTTTAGATGTATAAAATAGATGTTGAACTCCCTTTGACTAGTTCATATGTTTGTTCTTTCCAATTTTGAACCCTCTTATTGAAAATTCTAGTTCCGCCACTAAGCTCTATTACAATGCAGGAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAG-AACAACAACT</genome_strand>
        <mrna_strand>CTCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAAACAACAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325185" ref_strand="+" ref_description="SGN-E325185 [cTOC-13-J16]">
      <seq>tcaatctatagcaattatgaagccatcttatattactttttcaaactttatgctattaatatttttaaccttatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcacttaaccctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaacccataccagaacaaaaagaacattaataatgttaccgtcgtatgatatatccacattacccgattggtgtcgattggaggaaggatggggttgttacccccatcaaggatcaaaaaagttgcggaagttgttgggcattttcagcagtagcagcaatagagggcatcaacaagatcaaaacaggaaaacttgtgtcactatcagaaccaccactaatggattgcgatgtttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24149" stop="26563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24449" g_stop="24888" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="445" r_length="445" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24889" i_stop="26152" i_length="1264">
            <donor d_prob="0.950" d_score="0.96"/>
            <acceptor a_prob="0.715" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26153" g_stop="26263" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="556" r_length="111" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E325185" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24449" e_stop="24888"/>
          <exon e_start="26153" e_stop="26263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTC-AAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCAC-TAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAG-ACATTAATAATGTTA-CGTCGTATGATATATCCACATTA-CCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCGGTACGTAACAATCAACATAAAAATTATATTAAGAAAGCGTATTTGGGTAAGCTTATAATTTGAGGGGTACTTTTTAAAAAAAAATATTAAATGACTTTTTCACTTATTTTTCATCGAATTCAATTACTGAAAAAATATAACGTGGGGGATAAGTTCTCACCAAAAAAGTGTGAAACTTCCTAATTTTTCCATATGAAATAATTCGTACTATTTTTTCCCTTTCAGATCGATTCAATCAAAAAAGGAAAATTTACATAAATATACTATGATAAAAAAATATTTACCATTTATAGCAATAATAATTTTTTTCACTTGATCAGTTTTAATTCATTTATAATAAAAGTTTGATACATATTACAAAGAAAAATTTATTATTCACATATAATCAAGTTTTAATGATGGATAATACATTTTTCACACATTTTAATACATTTATAATATAATGTGTCAAATTTTTACCAAACAAACATAATATATTTCAAAAAATAATTATAATTCATATATATTGCATATATAATTCACCTTTGATTCATATTGCAGATTTTACATAATAATGCTATAAATGGTAATAAATAAAAAGAATTACTAAAATTAGTGATTATTTATAAAAATGTACCAATTTATGTAATTTTTTCATCAAAATACTAGCGGAAATAATTACACTAAACATTTAGCCATGGTTACACCATTCAATACCAACTAATAATTATTGTTAGTTTCATAACATCCATCCAAACATATACTCCTTCGTCCGTCAATTTTTAGTTGTCATGTTGTGTTTTTCAAAAGCCAGTTCGACTATTTTTCAAAGTTAAATTAGATTACATTAATTCTATATTTAAATATTGAAAAACTATACAAAAGTGTTATACATTGCAATTTTTTCATATTAATATGATGAAAAATAATCGTATTAGTCAAAGTTCTTATCGTTTGACTCTAAAAAAGAAAACCATGACAACTAAAGTAGACAGATAGAATAATTACTTGTTTCATTTATAAAATTAGATTATCAACTATTCTCGATCAGCTAATCCAAACGGGCCGGACTTTATCAGGGACATAACCAGCATGTCTTTTAGGGGGTTCATCCAAACCCCCTTCGGCGGGAAAATATTACTATACATACGTGGTTAAAATTATTTTTTAGATGTATAAAATAGATGTTGAACTCCCTTTGACTAGTTCATATGTTTGTTCTTTCCAATTTTGAACCCTCTTATTGAAAATTCTAGTTCCGCCACTAAGCTCTATTACAATGCAGGAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACT</genome_strand>
        <mrna_strand>TCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTTAACCCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCCATACCAGAACAAAAAGAACATTAATAATGTTACCGTCGTATGATATATCCACATTACCCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACCCCCATCAAGGATCAAAAAAGTTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACCACCACTAATGGATTGCGATGTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323828" ref_strand="+" ref_description="SGN-E323828 [cTOC-5-D23]">
      <seq>tcaatctatagcaattatgaggccatcttatattactttttcaaactttatgctattaatatttttaaccttatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcactaaacctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaaccaatacaagaacaaaaagacattaataatgttacgtcgtatgatatatccacattaccgattggtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24149" stop="25135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24449" g_stop="24835" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E323828" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24449" e_stop="24835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTC-AAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGT</genome_strand>
        <mrna_strand>TCAATCTATAGCAATTATGAGGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689121" ref_strand="+" ref_description="SGN-E689121 [t3_tus_80_D06]">
      <seq>cgatctatagcaattatgaagccatcttatattactttttcaaactttatgctattaatatttttaaccttatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcactaaacctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaaccaatacaagaacaaaaagacattaataatgttacgtcgtatgatatatccacattaccgattggtgtcgattggaggaaggatggggttgttacaccaatcaaggatcaaaaaagttgcggaagttgttgggcattttcagcagtagcagcaatagagggcatcaacaagatcaaaacaggaaaacttgtgtcactatcagaacaacaactaatggattgcgatgtttactcagacaatcaaggatgtaatggagggtttatggaaagtgcatttgattacataatggaaaatggtgggattacaacttcaaaaaattatccatacataggaaaaaaacaaaaatgtaacacaaaaaaagcaaaacaacatgaagttaggataagtaattatgaaaaggtaccaccaaatgaggaatcacttcaagttgcaattaacaaacaaccaatatcagtggctattgatgcaagtggctataattttcattatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24150" stop="26824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24450" g_stop="24888" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="439" r_length="439" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24889" i_stop="26152" i_length="1264">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.715" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26153" g_stop="26524" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="810" r_length="371" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E689121" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24450" e_stop="24888"/>
          <exon e_start="26153" e_stop="26524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCGGTACGTAACAATCAACATAAAAATTATATTAAGAAAGCGTATTTGGGTAAGCTTATAATTTGAGGGGTACTTTTTAAAAAAAAATATTAAATGACTTTTTCACTTATTTTTCATCGAATTCAATTACTGAAAAAATATAACGTGGGGGATAAGTTCTCACCAAAAAAGTGTGAAACTTCCTAATTTTTCCATATGAAATAATTCGTACTATTTTTTCCCTTTCAGATCGATTCAATCAAAAAAGGAAAATTTACATAAATATACTATGATAAAAAAATATTTACCATTTATAGCAATAATAATTTTTTTCACTTGATCAGTTTTAATTCATTTATAATAAAAGTTTGATACATATTACAAAGAAAAATTTATTATTCACATATAATCAAGTTTTAATGATGGATAATACATTTTTCACACATTTTAATACATTTATAATATAATGTGTCAAATTTTTACCAAACAAACATAATATATTTCAAAAAATAATTATAATTCATATATATTGCATATATAATTCACCTTTGATTCATATTGCAGATTTTACATAATAATGCTATAAATGGTAATAAATAAAAAGAATTACTAAAATTAGTGATTATTTATAAAAATGTACCAATTTATGTAATTTTTTCATCAAAATACTAGCGGAAATAATTACACTAAACATTTAGCCATGGTTACACCATTCAATACCAACTAATAATTATTGTTAGTTTCATAACATCCATCCAAACATATACTCCTTCGTCCGTCAATTTTTAGTTGTCATGTTGTGTTTTTCAAAAGCCAGTTCGACTATTTTTCAAAGTTAAATTAGATTACATTAATTCTATATTTAAATATTGAAAAACTATACAAAAGTGTTATACATTGCAATTTTTTCATATTAATATGATGAAAAATAATCGTATTAGTCAAAGTTCTTATCGTTTGACTCTAAAAAAGAAAACCATGACAACTAAAGTAGACAGATAGAATAATTACTTGTTTCATTTATAAAATTAGATTATCAACTATTCTCGATCAGCTAATCCAAACGGGCCGGACTTTATCAGGGACATAACCAGCATGTCTTTTAGGGGGTTCATCCAAACCCCCTTCGGCGGGAAAATATTACTATACATACGTGGTTAAAATTATTTTTTAGATGTATAAAATAGATGTTGAACTCCCTTTGACTAGTTCATATGTTTGTTCTTTCCAATTTTGAACCCTCTTATTGAAAATTCTAGTTCCGCCACTAAGCTCTATTACAATGCAGGAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAGAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACT</genome_strand>
        <mrna_strand>CGATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAAAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTC-ATTATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324456" ref_strand="+" ref_description="SGN-E324456 [cTOC-6-F1]">
      <seq>tctatagcaattatgaagccatcttatattactttttcaaactgggtgctattaatatttttaacctgatgttatgtcacaaatgcaagtcaagatgatccaataattctcaatagataccaaaattgggtcaaaaaatacagaagaaaataccaaaatgaagctgaatggaatatgagatttggaatttatcaatcaaatattcaattcattgatttcttcaattcactaaacctttcttatagccttactgataatgcttttgcggacatgacaaatcgagaatttaattctatttatttaggttacgaaaaaccaatacaagaacaaaaagacattaataatgttacgtcgtatgatatatccacattaccgattggtgtcgattggaggaaggatggggttgttacaccaatcaaggatcaaaaaagttgcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="24153" stop="25188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24453" g_stop="24888" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E324456" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24453" e_stop="24888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG</genome_strand>
        <mrna_strand>TCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTGGGTGCTATTAATATTTTTAACCTGATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391929" ref_strand="+" ref_description="SGN-E391929 [TUS-27-D10](-)">
      <seq>tcagaacaacaactaatggattgcgatgtttactcagacaatcaaggatgtaatggagggtttatggaaagtgcatttgattacataatggaaaatggtgggattacaacttcaaaaaattatccatacataggaaaaaaacaaaaatgtaacacaaaaaaagcaaaacaacacgaagttaggataagtaattatgaaaaggtaccaccaaatgcggaatcatttcaagttgcaattaacaaacaaccaatatcaggggtttttcatgcaagtggctataattttcaattatactaaagaggggtattttcttggctatcgaggaaatatgggaaatcatgcagggacatgaattggttttgatgtggaagaaaataagggcgaaaaatattggctagtaaaaaattcttggggtcctatgtggggcgaaaggggttataagaaaattaagagggggtcaagtgataatggaggaatccatggtattgttatgcaagctagttacccttttatggaggaatatgtataaataagtcataataagagcaaaaaaagtcaatacataataaaataaagaaaaataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="25930" stop="27100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26230" g_stop="26786" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="577" polyA_stop="594"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E391929" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26230" e_stop="26786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAGAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTC-TGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTC</genome_strand>
        <mrna_strand>TCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAAAACAAAAATGTAACACAAAAAAAGCAAAACAACACGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGCGGAATCATTTCAAGTTGCAATTAACAAACAACCAATATCAGGGGTTTTTCATGCAAGTGGCTATAATTTTCAATTATACTAAAGAGGGGTATTTTCTTGGCTATCGAGGAAATATGGGAAATCATGCAGGGACATGAATTGGTTTTGATGTGGAAGAAAATAAGGGCGAAAAATATTGGCTAGTAAAAAATTCTTGGGGTCCTATGTGGGGCGAAAGGGGTTATAAGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATCCATGGTATTGTTATGCAAGCTAGTTACCCTTTTATGGAGGAATATGTATAAATAAGTCATAATAAGAGCA-AAAAAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228634" ref_strand="+" ref_description="SGN-E228634 [cLEL-29-A13](-)">
      <seq>gttaggataagtaattatgaaaaggtaccaccaaatgaggaatcacttcaagttgcaattaacaaacaaccaaaatcagtggctattgatgcaagtggctataattttcaattatactctagaggggtattttctggctattgtggaaatatgttaaatcatgcagtgacattaattggctatgatgtggaagaaaataatggtgagaaatattggatagtaaaaaattcatggggtactatgtggggtgaaagtggttatatgaaaattaagagggggtcaagtgataatggaggaatgtgtggtattgctatgcaagctagttaccctcttatggaggaatatgtataaataagtcataatatgtgcataaataagtcatcataataaaatatttgaaaaataattgtgattccccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="26107" stop="27128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26407" g_stop="26827" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="422" polyA_stop="435"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E228634" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26407" e_stop="26827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTCTGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCTCCAAA</genome_strand>
        <mrna_strand>GTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAAAATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTCTGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229114" ref_strand="+" ref_description="SGN-E229114 [cLEL-29-A13](-)">
      <seq>taagtaattatgaaaaggtaccccaaattaggaatcacttcaagttgcaattaacaaacaaccaatatcagtggctattgatgcaagtggctataattttcaattatactctagaggggtattttctggctattgtggaaatatgttaaatcatgcagtgacattaattggctatgatgtggaagaaaataatggtgagaaatattggatagtaaaaaattcatggggtactatgtggggtgaaagtggttatatgaaaattaagagggggtcaagtgataatggaggaatgtgtggtattgctatgcaagctagttaccctcttatggaggaatatgtataaataagtcataatatgtgcataaataagtcatcataataaaatatttgaaaaataattgtgattctcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="26114" stop="27128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26414" g_stop="26827" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="414" polyA_stop="427"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E229114" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26414" e_stop="26827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTCTGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCTCCAAA</genome_strand>
        <mrna_strand>TAAGTAATTATGAAAAGGTACC-CCAAATTAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTCTGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218528" ref_strand="+" ref_description="SGN-E218528 [cLEL-18-C20](-)">
      <seq>taatggtgaaaaatattggatagtaattgagtcatgtggtcctatgtggggtgaaagtggttatatcaaaattaacagggggccaagtgataatggaggaatgtgtggtattgctatgcaagctagttaccctcttatggagcaatatgtataaataagtcataatatgtgcataaataagtcatcacaatgaaatatttgaaacataattgtgattctcccaaaaaaaaaaaaacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="26304" stop="27128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26604" g_stop="26827" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="225" polyA_stop="248"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E218528" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>224</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26604" e_stop="26827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCTCCAAA</genome_strand>
        <mrna_strand>TAATGGTGAAAAATATTGGATAGTAATTGAGTCATGTGGTCCTATGTGGGGTGAAAGTGGTTATATCAAAATTAACAGGGGGCCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGCAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCACAATGAAATATTTGAAACATAATTGTGATTCTCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207579" ref_strand="+" ref_description="SGN-E207579 [cLEC-32-I9]">
      <seq>gtaaacaagaggactaagatttagcagagaagcagaagagccatttctctctttggagttcgaaatggtcggtccattgcttcaaactctctggtctaccactaggagatccttctcctcctctcattacttctcatatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27681" stop="32027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27981" g_stop="28371" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31727" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="449" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E207579" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27981" e_stop="28371"/>
          <exon e_start="31671" e_stop="31727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAACAAGAGGACTAAGATTTAGCAGAGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTA-TTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACAC</genome_strand>
        <mrna_strand>GTAAACAAGAGGACTAAGATTTAGCAGAGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCAAACTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTACTTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736456" ref_strand="+" ref_description="SGN-E736456 [LC05DC10]">
      <seq>cggtgaagcagaagagccatttctctctttggagttcgaaatggtcggtccattgcttcgatctctctggtctaccactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggtttacgccccattcttcttctcaataaagtagacaaacctgcagtgactgaagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaaccttggtgcttcagaggaacaactagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccatatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggcatgttcctccaccgagtgccaacctagatgccccttttcagatgttggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27705" stop="34157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28005" g_stop="28371" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="442" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="593" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33523" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="662" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33685" g_stop="33854" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="832" r_length="170" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E736456" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28005" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33523"/>
          <exon e_start="33685" e_stop="33854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTG</genome_strand>
        <mrna_strand>CGGTGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG.................................................................................................................................................................AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAACCTAGATGCCCCTTTTCAGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480671" ref_strand="+" ref_description="SGN-E480671 [cSTD-14-H10]">
      <seq>aagcagagcagccatttctctctttcgagttcgaaatggtcggtccattgcttcgatctctctggtctacaactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttttccaccgccacagctaccgctcccgttggctccgccggcactgcacccggcggcgctctggatcccgaccggctcaggaatgtcgcgggtatagctcatgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagattctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcatattttggtggtgaagttgacagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggattacgccccattcttcttctcaataaagtagacaaacctgcagtgactggagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27710" stop="33812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28010" g_stop="28371" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="437" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="588" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33512" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="646" r_length="58" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E480671" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28010" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCT</genome_strand>
        <mrna_strand>AAGCAGAGCAGCCATTTCTCTCTTTCGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACAACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTTTCCACCGCCACAGCTACCGCTCCCGTTGGCTCCGCCGGCACTGCACCCGGCGGCGCTCTGGATCCCGACCGGCTCAGGAATGTCGCGGGTATAGCTCATGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGATTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCATATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGATTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGGAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437095" ref_strand="+" ref_description="SGN-E437095 [cSTA-2-N5]">
      <seq>aagcagagcagccatttctctctttcgagttcgaaatggtcggtccattgcttcgatctctctggtctacaactaggagatccttctcctcctctcattattctcacatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgctactgcacccggcggcgctctggatcccgaccggctcaggaatgtcgcggttatagctcatgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagattctatcgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27710" stop="32026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28010" g_stop="28371" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31726" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="418" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E437095" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28010" e_stop="28371"/>
          <exon e_start="31671" e_stop="31726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACA</genome_strand>
        <mrna_strand>AAGCAGAGCAGCCATTTCTCTCTTTCGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACAACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCACATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCTACTGCACCCGGCGGCGCTCTGGATCCCGACCGGCTCAGGAATGTCGCGGTTATAGCTCATGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGATTCTATCGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478622" ref_strand="+" ref_description="SGN-E478622 [cSTD-6-A2]">
      <seq>gcagagcagccatttctctctttcgagttcgaaatggtcggtccattgcttcgatctctctggtctacaactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttttccaccgccacagctaccgctcccgttggctccgccgccactgcacccggcggcgctctggatcccgaccggctcaggaatgtcgcggttatagctcatgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagattctattgacctcgaacgagagcgcggcatcactattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27712" stop="28665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28012" g_stop="28365" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E478622" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28012" e_stop="28365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCT</genome_strand>
        <mrna_strand>GCAGAGCAGCCATTTCTCTCTTTCGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACAACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTTTCCACCGCCACAGCTACCGCTCCCGTTGGCTCCGCCGCCACTGCACCCGGCGGCGCTCTGGATCCCGACCGGCTCAGGAATGTCGCGGTTATAGCTCATGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGATTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746893" ref_strand="+" ref_description="SGN-E746893 [GI|47104389]">
      <seq>ctctctttggagttcgaaatggtcggtccattgcttcgatctctctggtctaccactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggtttacgccccattcttcttctcaataaagtagacaaacctgcagtgactgaagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaaccttggtgcttcagaggaacaactagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccatatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggcatgttcctccaccgagtgccagcctagatgccccttttcagatgttggtttccatgatggagaaagatccttatctcggtcgtgttttgacgggtcgtgtaacttgtggagttgttcgtgttggtgataaagtacaagggctgaagaacacagacaatggaactgtaaaaattgaagaagggaaggttgtaaagctgatgaaaaagaagggtatgagagcagatccagttgatagtgctggtgcaggtgacatagtgtccttggcaggtttgtcaagtccaacaattggacacacagttgcgaatgcagaggttatgacagcgctgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagtacgtcagaatcatatgaagtgcagggtagaggtgaacttcagttaggtatcttaattgagaacatgagacgtgaaggatttgagctctctgtctccccacctaaagtcatgtacaaagtagagaaaggtactaagcttgagccaattgaagaagtgactattgaggttgatgacgagcacgtaggtttggtcatggaagcactttctcacaggcgaggtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtccttcaagagggctagtgggctatagaagcgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgaaaaatatcgtggtcctcttggaaatgtcaggaaaggagttctagtatcaatgggccgtgggttaatcactgctcatgcactgatggggttagaacctcgtggagttctctttgtggcacctgcaatggagacatatgatggcatgattattggagaacattctcgggatacagatcttgatgtcaatccggttaaggcaaaagaactcaacaatataaggtgcgctagcaaggatgagaacgtcaagttaactcctccccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagccattaggctaagaaagagatacttggaagtgaacaagagaaaatcaatgagcaagaggcccaaggattgaagcatttttctcacatttgtataaatgaaatttaatttatcttcacctctacttaaatgttcctcatttatacacacatctttacacttataatagatagggaaaaattgtataacataaatattctttttcaagcactctatcgggaatgtatttcagcgtaacacagcttattaaaagccgagttaccgaaaatataaatgcttgaatgcaataaaattttgtcctacttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27727" stop="47620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28027" g_stop="28371" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="420" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="571" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33523" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="640" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33685" g_stop="33854" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="810" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33855" i_stop="37921" i_length="4067">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37922" g_stop="38059" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="948" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="38060" i_stop="38663" i_length="604">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="38664" g_stop="38789" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="949" r_stop="1074" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1075" r_stop="1173" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1174" r_stop="1294" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1295" r_stop="1358" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1359" r_stop="1413" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="42744" g_stop="42868" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1414" r_stop="1538" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1539" r_stop="1612" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="43526" i_stop="44929" i_length="1404">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="44930" g_stop="44979" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1613" r_stop="1662" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="44980" i_stop="45841" i_length="862">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="45842" g_stop="45928" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1663" r_stop="1749" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="45929" i_stop="46302" i_length="374">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="46303" g_stop="46353" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1750" r_stop="1800" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="46354" i_stop="46428" i_length="75">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="46429" g_stop="46512" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1801" r_stop="1884" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1885" r_stop="1935" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="46999" g_stop="47318" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="1936" r_stop="2255" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2256" polyA_stop="2268"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E746893" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2255</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746893" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28027" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33523"/>
          <exon e_start="33685" e_stop="33854"/>
          <exon e_start="37922" e_stop="38059"/>
          <exon e_start="38664" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
          <exon e_start="44930" e_stop="44979"/>
          <exon e_start="45842" e_stop="45928"/>
          <exon e_start="46303" e_stop="46353"/>
          <exon e_start="46429" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTGGTTAGTATTGCATTTGCATTTCTTAGTTCATATGTTGTATTGAGATAAATGATTTAGGTGAATAGCCATTTATGCAACTTCGCAAAATTAAACGTAGCAAGTGCCAAAGCTGGTAATAATTCTCATATATTTCAGCTTACGTACATGTAGCTATTGTACATTTTGCTGTACTTTGTTGATTACCTCCTTTTTTCCAAGTACCACTTCCATGGCCCATTTGTAAGAAATTCGTGCTTGCTTTGTTTTCCTAAAGAAATATTTTACTTAAATTCCTTTATAATTGGCTAGAGGTATTGCAGATGGAGAAGTTGCTGAATGCTTATTATGAGAGTCTTAGAAGTAAGATGCGTGTTAATATTCATTTGGTGATTAAGGGAATATATGTAAGATAGAAGTGAATACACGATTTAGTGGCTGTTATCTTTTATAATTGAAAAATAATCTAATGTCTCATTGATTTTGAGAAAGAAATCGTTGGAGGTAGATTAAGAAGTGGTGTTGTGTCGAGACCAGAACTAATCTAGATAAATTTATACTGGATATAATGTTGTAAGAAGAGTTGATGAACATACCTTTATGAGTGGAGACACTTTGCTTAAACAATCAATCAAAAGAAGCCTATGTGAGGAAAAAGTCAGGCAGGCTGTATAAATCTAAACACCTAGCCTGGTAATGATATTTTTTGCCTTGGGCCTAGGCCCGCACGACTTTAAGATGTATCACTAGTTGGTAAGGTCTGCTTACTCATATACCTAACATATCTCTTGTATTTTATCGATGTGGGATCTCTTATCTTAAGCTAGGGCATCACATAAATCCCTTTATGGACTCAACCTCCTAGTTGAGGTTTGCCCCACTTTATGGAATTTGCTTAGACTCAACCTTGAGTTTTGTCCCGCTTTACTTGGATTTTTGCGAAAAATCAGTTGAACTTTGGCACACATTGACAAGGCTGACATATGAGTGGCTCTGATTCCATTGGGACCACTAGTTAGTTCTCATAGCATCAGGGCCTCTCGAGAGGTCCATTAGACTCTACATATTTTTGGGCCATTTATCCAACATCCAACCCCTTTAATGCCCTTGGTTACAAGCGAATGTTAGTTGGCTCAACAACGTAATGTTAGGTCATTCATATTCTTATATCAAAATTCTCAAATGAGTCGTGCTTATGATCTTTCACCCTAAAGCTCTTTCAGTGATCTTTTTTTAGTTTTGAGAGTGATGTTGATAGTAGTTGTGTGATGATAGATAACAATGGGTTGGTGTTTCTTATTGTGACGGTGATGATGCGCTTATTCCATCTAAAGGTTACAAATATGGAGGAAGAAGGGGATGAGGTTTTAGGATGAGTAATAGTTAGATGAGAGTAATTAGGCTGTTTCTGGGTAGTAAGAAGTGAAATTTTAGTTGGTAGAGGTGATCAGAGAACGAGGAATTCTTAGAAGGATTGGCTAGTAGATTCCACAGAGTGGTTATAGTTCCAGGCTTGAATGTGGCATTGATAACACGTGGATGAATGAATGATGCATTAGGTACTTCTTGATTGGAACTCGAAGTTTATTTAATAGGTGATAAGGAGTAGTATTCTTAGGATTATTTCCCATATATAATAAGAGTAAATCCTTTCCTTCCCATGCTCTGTTCAACAATCATTCGAGGACGTAGGATTCCAAGGGGATATATTACATCCCAAAAGTTTCTAAGCTAAGGTTCAAACCATTCTTCATTTGTGTATAAGGTCGTATCGTGTGATTCGTAAATTATTCTTGGGGGTTGATGTCAATTATTTAGTGTGTGAATGAATTTGGTTGAGTTAAGGTTACTAGTAATATACTAGTTACCAAAAAAAGGAATTAAGGTTATTAGAATTCCTCTAGCACAAAGTTTGATTGAAGGCTTCCTTGTCGATTGAGTTTTGATATAAGATTCTACTTAGGTTAACTTCAAAAGATCATATCTTTTAGAATATGACGAGTTAGGTGACACATAATTTATCAAATTAAAGGTATTTGAGTCTTCCTTCCAACACTATCAAATTTGCATCATTCAGAGTTTGGAGTAGAGAGTTATAATCATTTACTAGTCTGATGACATGCAGTGGAGTATAGAGTTATAATCATTTTAGTAATTTGATGCATGCGGTGACGCTTTGGCCGGCCGGAAAACACTAAAAGTTGTCATTTTTGTCGTTGTACCCCTAAGATAAACCTAAACAGATTTCTTAACCAATAAAATGCCCAAAACAATCAGATTTTCATCTCTTAATCCTCCAATTTCTTCTCTCTCAAACCCCAACGCAGAACCCCAAGGAAAATCAAAGCATAGGATTTCCAAACAAGATTCTTCCAAATCTTTTTCAATATTTATCTCCAAGGTAAGTCCTCTTCAAGAATTTCATTATTTCCAAGTTCCAACTCAAATTCCTTCATACGGTTATAAATCATTAATGAAAATCTTAATTCTTGGCCATAGGGTTTTCAAGAAACTAATTCAAGTATCTCAACAAAAGTTTTCTTGATTGTTCTCTTACGACTTCAAGTCTTCCAATCAAGTTCCTTTTTCTAACTTCTTCAAGAACTTTGTTCTTTTATGTAAGACTATTAATAGTGTTGGACTTGTTCGTCCTCATGCCTTTCGTCTAAATTCAGTCAACAATAGTTATGCTTAGTCAACAATATGGTTCATGTGACTTTTTTAGGATAAAACCCTAAACATAACTTTTGTCGGCTAAATTTAGATGTAGGGCGTAAGTACGAACTAGTCCAACACTATGAATAGCCTTACATACCTAGAAGAATAAAGTTCATGAAGAAGTTTGAAAAATAACTTGATTGAAAGACTTGAAATCCTAGCTTTAATGAGAATGATCAAGAAAATCTTTATTGATATTCTTGAATTATTTACTTGAAAACTCTATGGCCAAGAATTAAGATTTTCATTAATGATTCATAATTGTAGGAAGGAATTTGAGTTGAAATTAATGAAATTCTAGGACTTACCTTGAAAAAGATTTGAAAGAATCTTGCTTGGAAGTCTTATGCTTTGATTTTATTTAGGGTTTGATAGAGAAGAGAATGTGAGATGAAAATCTGATTGTTTTCGGCCTTTTATTAGTCATTAAATCCGTTTTCTGTCTTCTTAGGGACAAAACAACCCTTTTTAGTGTTTTCCCGTTGGTTAAAACGTCACTGAATGCTCAAATCAGTTAAAAATGATTGTATCTCTCTATTTCAAATAATGCAAACTTGATGGCGTAGGAAAGAAGACACAAATACTTTTAATTTGACAGGTTACGGGGCACGTAACTCTTCATATTGTAAAAGATATGATCATTTGAAGTTGAGCAAAGTAGATCTTATATCAAAACTCAATCGATATGGAAACTTCCAACTCATCTTTATGCTAGGCTATTCTAGTGACTTTAATCCAAATCAATTCCCGCACTAAATAATGGACACCTAAGAACAATTTAAGAATCACTCGATAGACCTTATAATACACAAATGAAGAATGTTTCAGGTCATAACTTGGAAATTTTCGGGGTGTTACAATAAAGACAGGAAAGAAAGAATTTTGGTCAATTCACCAATAGGTGAGAAGTCATTTCAAACAGATGAAGAGGGGGGAGTAGTAAGGTGCTCAAGATTTAGGATTTGTACAAAAGAGCTGAAAGATTCCTCTGACCACTTATCTGATCCATACGGTTCCTTTCGAAGAATCTAGTCAAAAGATTCCTCTGACCACTTTTTATCAAATACAACAGAGGAGGTGATTTTAGACCTTGCCTAGTGGCTAGGTTGTCCTCTTTGAAAGGTAATTTGCAACTTAAGAAATAAGGTCCTCCATCTTTGTTCGACTCATTGGATCAACTTTTTACGTCTTGGGCCCTAATTAGATGTACTGTTCCATTGAAGGACCGCTTATTGTTCATATTGGATAACTTTCTTTATTTTCTTGGGGTTCACATTTGTTTGATGATTTTCTATTCTTGATCCTTTCAGAATCCTTGTACTTCTGTTTTTTATGTGCCTTGAGAAGATACTATGCTTAATAGTTGCTTTCAGGTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAGGTCTGTTGTCTCCAGAACTAAGGGGAAATCTTCTCTGTACCATTTTTGTAACTTAAGTATGTTTTAAGATGCTAGAGGGATATTTGAAAATCTAGTAAATTGTCATGTATATAGTCATCAAATAATTTTTCGAATTTTGGCAAAATTTGAGGTAATCAAACTAAATTGAACTCCACAACACGGGTAACTATGGTGTCAAATAATCAAAACATGCATCAGAGAATTAGGTGTAACAAAATTTTAATCATGTGATATGTTTCTCTGGTACTTTGACTAACAGAGGAGATTAATAACTTAAATAATCTATTTTACGAGGTGTCAATTATAACTTCCATGACTGTCACAGGCAACTTTATTATGTGTCAGTAAGTCATTTTTTAGAGGAAAGCTATGGTTATTGATAGCTCATATAGATTCGGATGAAGGTATTTTAGCACTCAAAACGACTTATTTCAAGCTTGAATGTTTAGGACTATATTTAGGATCTATTTTAGTTATTTACTTATTATTGGAATTCTAAGCCCTGAGCTAGTGCCATGCTTTGAAATTGTCATCTAATTTTCATTTCTGTTTCTTTCTTGTTTACTGGCCTAAACTTTCATAGGTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTGAGGTTCTGGTTATGGTCCTTGTGATATATGTCTAGGCATATTCAACATTCAATTAATATATGTCCTTCAGGTCCTTCTGTATAGGGAATATGTTGCCTTTACACTATTTTAAAACTATATTACCCTCGTAATACATGGATATTAAATTATGCAACAGTTAATATAACTCTTTGTCCCTCAAAGATCAACATATTCTGATTTTGGTCCTTGTGATAACCACATTGACCTTCAACTAATTGAAATATGTATTTTGGAACCCTCTCGTTTGTGGAGTCACCACATTCAAATTGTTAATTGTTACATAATTTAATAATCATGAATTTTGAGGGTAATATAGTTCTAAAAATAGTGTAAATGTACCATATTTCCCTATATGGAAGGACATCTATTCTTTGAATGTTAAATATGCTTTTAGTCATATATCACAAGGACCAAAATTAGAGTTTACTAGTAACTTGAGAGGGGAAAGTTGATATCATCATGTATATGGTGGTCTGTGGAGAGGAAGGAATAGAAAATGTTTTGAAGATAGATCATGTGAACAATTATGTTTACTGGATTATAGAGTGATAGAAAATTTGTGATTTTTGTGATGAATTTTGAAGGTAGCCAGCATGTCCTAATGCTGAAGAATACAAACTTACCAATTCCCTCTCTCAAAAAAAAGTGTTAATACCCCTGATCTCGACAGTCAAGAGTAAAGAAAAGCTTGACTTGTCATGATGATTTCTGAATAGGCACTTCAAAATAAGTTATTTCCCATTTTAACTTTTAAGATTGATGCATGGGTAATCTGTGCATAAACACAATCAATTCACGGATACATATATAGAGAACAAATTTTCATTCCAAATGCCAAAGTTCTAATTCTTTTGGAGTTATTCTTTAGCCTTTTTCTGTCTATTTTAATTACATCTAATGCATGTTTGAATGCCTGCTATATGGTTTTAACGTTTCATTATTCTTAGCCTCTTTCTCCTTGGTGCAGCTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTAGTAAGCATCCTTACTACCCTGTAAAGACATGTTTGAGTTTTCTTTCTTTATTCCTCTTGCCATCTTCAAGATGCTATTGTTTCATAATTGTGAAGTACAAATAGCGTGTCCCTCAGTTCTGCCAGGGATGTCTTTCATCTCCTGTTCTACTCAGCTTAATGTATGTTCAGCCAATTTCTACTTTAAATATTGTCACCGTTGCATAAATGTGTCCCTAACAAGTTAGTACTTTCTGTCTGTTGGCCTGTTACAACTTGTGACTTTCATGGTTCATAGTTACCATTTCTCATTTTCATGCCTTACAATGTGTTGCTGGTGTACCGGAGCTTGTATTCCAGTACTCTCCAGAATGGTCTTCTTGAGATCCTTTAACATTCTTACCATGTTTAAGAGGCTAGGAGCCTGTTTGGATTGACTTAAAAGTTGGTCAAGCCATTTTTAGCTTTTGTAAGTATTTGACAAGGTTAAAAATAACTTAAAAAAAAGTTAAAAAATCAAAAGTAGGTCTCCCCTGGTTTTTATTTTGACTTAAAAGTCATTCAAGTTTGACTTTTTATTTTTTGACTTGAAACGAGATCTAGGTCCGAATAAATATAACATTTTTCTCTCAAAACATCTTTAATTGATCCCAAAATTCCCTTGAATTTTATGTTCTCTTCCAATTGTCTAGTATATTTGTTATGAGTACTTCAAATGCCGCTTCCCAGTAGCCTTTTGAGGCAGTTTAGCTCAGATTTGAACATGTATAAAAAATCGTCATATCACACTTGTATTTGATATTATATCTTCTGTTTTTCGACAAAGGATATATATATCTCCAGTTTCAATTTGTGGATAACTGTACCTCCTATTGGTTGAACAGGTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAGGTGATTCAATTGAACTTTTTGTCCTAATTTCTTTCCTTAGAAGTAGTAAAAAGAGTATCAACCTTCATTAACTACCAAAATTTTTTGTGATCTCAAATATGCATGACCTAGTACTGATAGTTTTGATGTTGATGTCATTCCAGTTGTGATCACTTAAAAGTGGTGATTAGGAGATATTTTATCTGTGGAATGTATTATATATTACAGGACCAGAGTCCTCGCAATTTAAAGGCTTATAAAATTCGAAGTGTTGAAGTAAAGATAGAAAACAATGTGTATACTATCAGGGATCTTGATGATAGCGTTGTCAATCACATGCTCTTTTGAAGAATATAAAAACACTGTTACCTTACTTTGTCTTGGATAATATGCAGACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGATGTAAGGAGCTGTTATTTCATTTCTTACAGTGTTTGTCATGTGCATTTGTGACTTTTGGGTGATTGCATGAAACAGGTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTATTTCAGCGTAACACAGCTTATTAAAAGCCGAGTTACCGAAAATATAAATGCTTGAATGCAATAAAATTTTGTCCTACTTTTAA</genome_strand>
        <mrna_strand>CTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG.................................................................................................................................................................AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAG......................................................................................................................................................................................................................................................................................................................................................................................ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGAT...........................................................................GTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTATTTCAGCGTAACACAGCTTATTAAAAGCCGAGTTACCGAAAATATAAATGCTTGAATGCAATAAAATTTTGTCCTACTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E538899" ref_strand="+" ref_description="SGN-E538899 [TUS-58-G2]">
      <seq>ctctctttggagttcgaaatggtcggtccattgcttcgatctctctggtctaccactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggtttacgccccattcttcttctcaataaagtagacaaacctgcagtgactgaagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaaccttggtgcttcagaggaacaactagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccatatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggcatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27727" stop="34112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28027" g_stop="28371" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="420" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="571" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33523" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="640" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33685" g_stop="33812" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="768" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E538899" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28027" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33523"/>
          <exon e_start="33685" e_stop="33812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTT</genome_strand>
        <mrna_strand>CTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG.................................................................................................................................................................AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440621" ref_strand="+" ref_description="SGN-E440621 [cSTA-17-H8]">
      <seq>ctctctttcgagttcgaaatggtcggtccattgcttcgatctctctggtctacaactaggagatccttctcctcctctcattattctcacatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgctactgcacccggcggcgctctggatcccgaccggctcaggaatgtcgcggttatagctcatgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27727" stop="28622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28027" g_stop="28322" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E440621" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28027" e_stop="28322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTT</genome_strand>
        <mrna_strand>CTCTCTTTCGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACAACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCACATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCTACTGCACCCGGCGGCGCTCTGGATCCCGACCGGCTCAGGAATGTCGCGGTTATAGCTCATGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279029" ref_strand="+" ref_description="SGN-E279029 [cLER-2-N22]">
      <seq>tctctttggagttcgaaatggtcggtccattgcttcgatctctctggtctaccactaggagatccttctcctcctctcattattctcatatcaaacctttatcctatgctcgagctttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27728" stop="33547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28028" g_stop="28371" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="419" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33247" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="440" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E279029" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28028" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATG</genome_strand>
        <mrna_strand>TCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333426" ref_strand="+" ref_description="SGN-E333426 [cTOD-20-J14]">
      <seq>tttctccaccgccacagctaccgcccccgttggctccgccgccacagcacccggcggcgctctggatcctggccggctcaggaatgtcgcggttatagctcacgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagactctattgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggtttacgccccattcttcttctcaataaagtagacaaacctgcagtgactgaagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaaccttggtgcttcagaggaacaactagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccatatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27843" stop="34108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28143" g_stop="28371" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="304" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="455" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33523" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="524" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33685" g_stop="33808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="648" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E333426" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28143" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33523"/>
          <exon e_start="33685" e_stop="33808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCA</genome_strand>
        <mrna_strand>TTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG.................................................................................................................................................................AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569122" ref_strand="+" ref_description="SGN-E569122 [13513]">
      <seq>caggaatgtcgcggttatagctcatgtcgatcatggaaagactactctcatggataggctgcttcgtcagtgcggcgctgatatacctcacgagcgtgccttagattctatcgacctcgaacgagagcgcggcatcactattgcttctaaggttacatccatctcgtggaaggacaaagagctaaacatggtggacactcctggacacgcagattttggtggtgaagttgagagggttgttggcatggttgagggagcagtccttgttgttgatgctggtgaaggtccacttgcacaaacaaaatttgttcttgccaaggcccttaaatatggtttacgccccattcttcttctcaataaagtagacaaacctgcagtgactgaagagagatgtaatgaagttgagagccttgtatttgatcttttcgcaaaccttggtgcttcagaggaacagttagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccacatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggcatgttcctccaccgagtgctagcctagatgccccttttcagatgttggtttcaatgatggagaaagatccttatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="27921" stop="38250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28221" g_stop="28371" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31671" g_stop="31745" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="226" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33227" g_stop="33377" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="377" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33455" g_stop="33523" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="446" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33685" g_stop="33854" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="616" r_length="170" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33855" i_stop="37921" i_length="4067">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.928" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37922" g_stop="37950" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="645" r_length="29" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E569122" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E569122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28221" e_stop="28371"/>
          <exon e_start="31671" e_stop="31745"/>
          <exon e_start="33227" e_stop="33377"/>
          <exon e_start="33455" e_stop="33523"/>
          <exon e_start="33685" e_stop="33854"/>
          <exon e_start="37922" e_stop="37950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAGGTATTTAATTTAAATCCCTTATTTGCCACTGGTTATGCGGATACTGTTGAAGCTTTTCTATAACGAAGTTCATTTTTTTGTAACGTACATGTTATGACTGGAGCTGGATTCAACTGTATATATTAAGTCGGGTTCACTTGGTCCATAGCTTTTTATACCAATTGAATTATAGGTGGATAGAGTTTTCGGAATAAAAAATGCATAATCATGTGGTAAATCTACAAAAAAAGTCCACCCTCCTGCACCTTATTATCTTAAGATAAAAACCATAGTTGCTAGACTTCAGATGGAAATGTTACAATCATTAGACCATGAATTGCTCTGTGATTCTGAAGATGCGGTGACTTGTGAGTTTGAGTCGCTACAGTACTCACTATTGCGCCAAAGCTTTCTACTCGTGGTATTCAGAATTGCTCTGTGATCTTGAAGTTGCAATGATGAAAAAAAGGCCGGACTTACTGCTGCTACCATGCGGTTGGTGGTGGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTCAGAAAGTTTTGGCCAATGAGTTGGTTTTCTTCTCCAAATCTTTTGTCTGGTACTTGATCTGTGTATAAGTTGATTTTTTTCCTTCCAAGACTAAGAGGTTTCACTAGGACCACCAGTATGATTCTTTAGCATACCTTGAACTGCTCTTGGATTTTGAAGATGTGATGTGAGTTTGACTCACTACTCACTGTAGTGGTATTCAGGATTGCTTTGTGATTGTGAAGATGCTTGTTGGTTTTTCAAATACATCTGATGATGTAGAATATCAGAATTTTAATGGTTGATGCTATGTTACTGCTTCCATTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACTATGTTGTTTGTAGTAGAGTGATGAAAGTTACAACTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATCTTAGAAAGTCTTAACCAATGGGCTGGTTTTCTTCTCCCAATCTTTTGCCTGGTTCTTAATCTGTGTACTAATTTGATTTTTTTCCTTCTTAGAGTTAGAGGTTTCGTGAGGACTAGCTGTATGATTCTTAAGATTACCATGAACTGTTCTTTGTTTTTGAAGATGCTATTTGAGTTTGACGTACAACTCACTGTTGGTGGTATTCAGGATTACTCTGTGATGCATGTTGGTTTCTAAATACTTGTGATGATATAGGGTATTAGAATTGTACGGGTTGTCACTTTGAGTCGAACGAGTCACTGCTTCCACTGGCAATGATGAAAAAAAGGCCGGACTTACAGCTGCTACCGTGTTGTTGGTAGTAGAGTGATGAAAGTTACAGCTAGGTATATTTGCTGAGCCAGATATGGATGATGTTGATTTTTAGTCGACTAGTTGGTACTTAATCTTTATATGGATTAAATTTTTTCTTTTAAGATTAAGATGTTTTGTGATTGCCACTAGTGACTAGTATGCTTAATGGATCTTGAAGTACTATTTCTGCATCTCCCTGACCAAATCCGCCTACATTAGATTACTCCTTAATGGCTGATCAAATTTGATTCTTTAGCTTAGCATTCTGGTATTAGGCACCTCTCTGTGATTTTGAAGATGTATGTCTGGTTTTAAAATTTATATGGTAATGGTGCTTTTAGGTTCTTTAGCTTAATGTTCTGGTATTAGGAACCTGTCTGTGATTTTGAAGATGTATGTTGGTTTTTAAATACTTATGGTAATGGTGATTTTTAAAAACCTAGAGCTTGTCACCATGTGAAAGTAAGCTACAACTTCCACCGGCAATATGAAAGAAAGGCCGGACTTAAGGCTGGTACATGTGGTTGGTTGTTGAGTGTTGAAAGTTACAAGAAGGTATATTTACTGAGCCAGATATGGATGATACTGATTTTTGATAGTTTTAGTTGATAGTTGGGTTTTTTCACCCTTATTTTCAGCCTTGGTCGATAGTTGGTTTCCTTCACCCTTATCTTCAGGGTTTGTTGATTGTTTTTAAATTGACAGGTTTTATGAATGCCTAAAACTTTACACTGTGCATACACTTTAACACATCAAAAAGTATTTTCACATTTACTGACATCAAACTTGAGGTAACTTGAAGTGATACTCTTAAGATTTTTTGCTTGTGTTATTTTAACAATTTTATAGCAATTTTTTGCTCCTCTCCGTCTTATGGTTACACCATCTTGGACTTACAAGTCGTTGAACACTACAAATGCATGGTGATGTTATTTAAGAGGGTAAAATCAATTAGAGAGAAAATGCAGTTTCCCTAAATCGTAAACTGTAAATGCTTTTTGTGGTAAACTATGTGGGTGTTCGGATTGACTTATTATAAGCAACTTTTGGTTTTAAGCGTTTTTTTTTAGTTTTGGAAGTGTCTGTGAAACATAAGAACTGTTTTAAAGCTCTGTTTTAGGCTCAAATTAGTAAAAAAAAAAAGCCAAAATCCAAAAGTTGGGTGTTCTCAACTTATGGAGTTTAGCTTATAGTATAGTAAGCCACTTGAAAAAAGCAATTCCAGACACCCCCTACAAAGGTAATATCATCATATAAAAAGAAACAAAGGCAGTATAGAATCATAGTGAACATAGAGTTAGAAGCAGAAATTAAGCGTCCAATTCCTTTTTACTTTTTGTTCTTTCCCCTATGCTCTAATAAGAAGTTTTCTCAGAGATTTATTTTTTTGTTTTTGTTTCCTTGTGGAGGGTTTGTCCAAGTTCTTTATGGATGAGAAGTATTTTTGAATGACGATCTCATACTTGAAAGCATATAGGCGTAAATTAACATGTCATATAGAACTTTTAGATTTTGGGATGATTTGTGATGCCTTGGTTGATAAGCTCTGTTAATCTACTTTTTTCATAAAAAGATGTATTTTATTTTTATCGAATTTTACAATGCTAAAATAAATGGCTTAGTACTAGGATAGTTGATTATATTTCAGCTTAAGTCAGGTCGTAATTGATTGTTCTTATCAATAGATAGTATATGGGTTTTAAAACAATAAAAAGAAATAGCCGTAGTTTAACATAACACTGAAGAAGAAGTTATCTGACTTTTGAATAATTTGAGTTCATAAATTTGGGATGAGTGAAGTTTAAACTAACACGCCGAATTGTAGATGCTATTTCACTTTTTGAAGATGAGGATATTGTTGTGTTTTTGGGCCTTGCTGTTTTGCTTGTCTTTATTTTTCTGATATCTATTCAAGTAACCTCCATTAATTATGTTGTTTGGACCAAATTTGGGTGAGCTCTGATATGCTTTTAACACTTTTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAAGTAAGTATTTATTTTATGAAGATTTTTGGTGGTCAAGTGTTTTTATTATTTTTTTCATTTTGTGTTTCTTTTCTTAGTGTACAATCAGTCAATGTCAGATATATAAATCACATAGAAGTTACTACAAGAATTGGTAATTATACTATTACCTTGGGTTTTAAGTGTTTCAGTGTTTGAAAGTGATGAATTATTTAGATTTTGAGGGGGGGGGGTTGATAAAATAGAAAAAAGTTGATATTCTTTGTATTAGGATGACCATTGTAAATGATTTCTCCAAAAGCAAGAAGTATTTCTAGGTGTCAGATTGTCTCTAAAATCAATAAATGGATCTCTTGGTATTGTGTTAATAAGAATCATAATTATTTCAAGATTTTGGGAAGTCATTCAGGCTTAGTGAAGAGGAAAAATGATTGATCCAAGCTACTATTAGCTCTAGGGGAAGATGTTTGTTGTGAATGCGAGGAAGTCAATTAATTTAAGTATTTAATTATATTTTAAAGTAGATTTATTTATTTATAATTAATTATAATTTAAGTAATTTTATTTATTATTCTAGAATGGGGTTTATGTTTTATAGTTTCTTAAGGATTAGGTTAAGCTATTAGTTTGGAATAGGATTTAAGTCTCCAGTTTCATAGGAATTAGACTTCCTATTGATGTAATAAGGCTCCTATTTAAAGTGGCTTTTGACGAATAAATAGTCATATTCCAGGAAAAAGCAAGATAGAGATTAGAGTTCTCTTTTCCATTGAACTCTAAAGTTTTAGTCTCCCTTTGAAGAGTTGAAGGGATCAGAGTTCTCTCTTTAAATGAAAAGGTTTCAGCCTCTCTTCAACAAAGTGAATTTATATATCGTCCGGGTGAAGCGATCCTTCCCTAAAGATTCATAACAATGTTATTCCATCATCTCCTTAGTTACATCTTTGAAAGTAAGACTGTTGTAAAAGAGATTCTTTGTGGTAAAGGTTGTCATGAGGAACCGTCTCGACAATACTTGGGAAAGTTTTTTTTGCAAAAAATATTGAATAAGAACTTTGTGGAAGTTGATAGTTGTATTTTTTTCTTTGTTTGAAGATGTATGAGTCTTATGTGTGTGGAAGAAGCGCTTTTGAATGAGAAGTACCTTACCTGCACTTCTTTAAAAATATTTGAAAAAGTCCTAAACAAAATTTTCTTTCACTAGCTTGATAAAATTTTCTTAGACAATCCGCACTGTTTTCGTTGTCAGCCCTTTTGCATATATCTGATGTTTCCTTTGGATGAAAGTGAATTCAATTTTACCCTGTTGAAGTGCAATAGCTTTTGTTTATTGTTTATATGTTATCTTCATGTTAAAAAGAAGAAGTGGAGCTTGTGTCAAGTGCGCTATCAATCTGACTTTGTCATGTGGTGTTTCATTGATTTTTATTCCAAGTGTTGCCTTGTGTTGTTCGGTTGACATGAAGAAAATTGTAAGCTTTTCACTTTTCATTTTCTTACAGGTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAGGTATTACATTTTTGAGGTTATTCTCATCACAAGTTCTTTTAATAGTTTATATTAACTCTTCAATTATACATATGCAGTGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTGGTTAGTATTGCATTTGCATTTCTTAGTTCATATGTTGTATTGAGATAAATGATTTAGGTGAATAGCCATTTATGCAACTTCGCAAAATTAAACGTAGCAAGTGCCAAAGCTGGTAATAATTCTCATATATTTCAGCTTACGTACATGTAGCTATTGTACATTTTGCTGTACTTTGTTGATTACCTCCTTTTTTCCAAGTACCACTTCCATGGCCCATTTGTAAGAAATTCGTGCTTGCTTTGTTTTCCTAAAGAAATATTTTACTTAAATTCCTTTATAATTGGCTAGAGGTATTGCAGATGGAGAAGTTGCTGAATGCTTATTATGAGAGTCTTAGAAGTAAGATGCGTGTTAATATTCATTTGGTGATTAAGGGAATATATGTAAGATAGAAGTGAATACACGATTTAGTGGCTGTTATCTTTTATAATTGAAAAATAATCTAATGTCTCATTGATTTTGAGAAAGAAATCGTTGGAGGTAGATTAAGAAGTGGTGTTGTGTCGAGACCAGAACTAATCTAGATAAATTTATACTGGATATAATGTTGTAAGAAGAGTTGATGAACATACCTTTATGAGTGGAGACACTTTGCTTAAACAATCAATCAAAAGAAGCCTATGTGAGGAAAAAGTCAGGCAGGCTGTATAAATCTAAACACCTAGCCTGGTAATGATATTTTTTGCCTTGGGCCTAGGCCCGCACGACTTTAAGATGTATCACTAGTTGGTAAGGTCTGCTTACTCATATACCTAACATATCTCTTGTATTTTATCGATGTGGGATCTCTTATCTTAAGCTAGGGCATCACATAAATCCCTTTATGGACTCAACCTCCTAGTTGAGGTTTGCCCCACTTTATGGAATTTGCTTAGACTCAACCTTGAGTTTTGTCCCGCTTTACTTGGATTTTTGCGAAAAATCAGTTGAACTTTGGCACACATTGACAAGGCTGACATATGAGTGGCTCTGATTCCATTGGGACCACTAGTTAGTTCTCATAGCATCAGGGCCTCTCGAGAGGTCCATTAGACTCTACATATTTTTGGGCCATTTATCCAACATCCAACCCCTTTAATGCCCTTGGTTACAAGCGAATGTTAGTTGGCTCAACAACGTAATGTTAGGTCATTCATATTCTTATATCAAAATTCTCAAATGAGTCGTGCTTATGATCTTTCACCCTAAAGCTCTTTCAGTGATCTTTTTTTAGTTTTGAGAGTGATGTTGATAGTAGTTGTGTGATGATAGATAACAATGGGTTGGTGTTTCTTATTGTGACGGTGATGATGCGCTTATTCCATCTAAAGGTTACAAATATGGAGGAAGAAGGGGATGAGGTTTTAGGATGAGTAATAGTTAGATGAGAGTAATTAGGCTGTTTCTGGGTAGTAAGAAGTGAAATTTTAGTTGGTAGAGGTGATCAGAGAACGAGGAATTCTTAGAAGGATTGGCTAGTAGATTCCACAGAGTGGTTATAGTTCCAGGCTTGAATGTGGCATTGATAACACGTGGATGAATGAATGATGCATTAGGTACTTCTTGATTGGAACTCGAAGTTTATTTAATAGGTGATAAGGAGTAGTATTCTTAGGATTATTTCCCATATATAATAAGAGTAAATCCTTTCCTTCCCATGCTCTGTTCAACAATCATTCGAGGACGTAGGATTCCAAGGGGATATATTACATCCCAAAAGTTTCTAAGCTAAGGTTCAAACCATTCTTCATTTGTGTATAAGGTCGTATCGTGTGATTCGTAAATTATTCTTGGGGGTTGATGTCAATTATTTAGTGTGTGAATGAATTTGGTTGAGTTAAGGTTACTAGTAATATACTAGTTACCAAAAAAAGGAATTAAGGTTATTAGAATTCCTCTAGCACAAAGTTTGATTGAAGGCTTCCTTGTCGATTGAGTTTTGATATAAGATTCTACTTAGGTTAACTTCAAAAGATCATATCTTTTAGAATATGACGAGTTAGGTGACACATAATTTATCAAATTAAAGGTATTTGAGTCTTCCTTCCAACACTATCAAATTTGCATCATTCAGAGTTTGGAGTAGAGAGTTATAATCATTTACTAGTCTGATGACATGCAGTGGAGTATAGAGTTATAATCATTTTAGTAATTTGATGCATGCGGTGACGCTTTGGCCGGCCGGAAAACACTAAAAGTTGTCATTTTTGTCGTTGTACCCCTAAGATAAACCTAAACAGATTTCTTAACCAATAAAATGCCCAAAACAATCAGATTTTCATCTCTTAATCCTCCAATTTCTTCTCTCTCAAACCCCAACGCAGAACCCCAAGGAAAATCAAAGCATAGGATTTCCAAACAAGATTCTTCCAAATCTTTTTCAATATTTATCTCCAAGGTAAGTCCTCTTCAAGAATTTCATTATTTCCAAGTTCCAACTCAAATTCCTTCATACGGTTATAAATCATTAATGAAAATCTTAATTCTTGGCCATAGGGTTTTCAAGAAACTAATTCAAGTATCTCAACAAAAGTTTTCTTGATTGTTCTCTTACGACTTCAAGTCTTCCAATCAAGTTCCTTTTTCTAACTTCTTCAAGAACTTTGTTCTTTTATGTAAGACTATTAATAGTGTTGGACTTGTTCGTCCTCATGCCTTTCGTCTAAATTCAGTCAACAATAGTTATGCTTAGTCAACAATATGGTTCATGTGACTTTTTTAGGATAAAACCCTAAACATAACTTTTGTCGGCTAAATTTAGATGTAGGGCGTAAGTACGAACTAGTCCAACACTATGAATAGCCTTACATACCTAGAAGAATAAAGTTCATGAAGAAGTTTGAAAAATAACTTGATTGAAAGACTTGAAATCCTAGCTTTAATGAGAATGATCAAGAAAATCTTTATTGATATTCTTGAATTATTTACTTGAAAACTCTATGGCCAAGAATTAAGATTTTCATTAATGATTCATAATTGTAGGAAGGAATTTGAGTTGAAATTAATGAAATTCTAGGACTTACCTTGAAAAAGATTTGAAAGAATCTTGCTTGGAAGTCTTATGCTTTGATTTTATTTAGGGTTTGATAGAGAAGAGAATGTGAGATGAAAATCTGATTGTTTTCGGCCTTTTATTAGTCATTAAATCCGTTTTCTGTCTTCTTAGGGACAAAACAACCCTTTTTAGTGTTTTCCCGTTGGTTAAAACGTCACTGAATGCTCAAATCAGTTAAAAATGATTGTATCTCTCTATTTCAAATAATGCAAACTTGATGGCGTAGGAAAGAAGACACAAATACTTTTAATTTGACAGGTTACGGGGCACGTAACTCTTCATATTGTAAAAGATATGATCATTTGAAGTTGAGCAAAGTAGATCTTATATCAAAACTCAATCGATATGGAAACTTCCAACTCATCTTTATGCTAGGCTATTCTAGTGACTTTAATCCAAATCAATTCCCGCACTAAATAATGGACACCTAAGAACAATTTAAGAATCACTCGATAGACCTTATAATACACAAATGAAGAATGTTTCAGGTCATAACTTGGAAATTTTCGGGGTGTTACAATAAAGACAGGAAAGAAAGAATTTTGGTCAATTCACCAATAGGTGAGAAGTCATTTCAAACAGATGAAGAGGGGGGAGTAGTAAGGTGCTCAAGATTTAGGATTTGTACAAAAGAGCTGAAAGATTCCTCTGACCACTTATCTGATCCATACGGTTCCTTTCGAAGAATCTAGTCAAAAGATTCCTCTGACCACTTTTTATCAAATACAACAGAGGAGGTGATTTTAGACCTTGCCTAGTGGCTAGGTTGTCCTCTTTGAAAGGTAATTTGCAACTTAAGAAATAAGGTCCTCCATCTTTGTTCGACTCATTGGATCAACTTTTTACGTCTTGGGCCCTAATTAGATGTACTGTTCCATTGAAGGACCGCTTATTGTTCATATTGGATAACTTTCTTTATTTTCTTGGGGTTCACATTTGTTTGATGATTTTCTATTCTTGATCCTTTCAGAATCCTTGTACTTCTGTTTTTTATGTGCCTTGAGAAGATACTATGCTTAATAGTTGCTTTCAGGTTTCCATGATGGAGAAAGATCCTTATCT</genome_strand>
        <mrna_strand>CAGGAATGTCGCGGTTATAGCTCATGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGATTCTATCGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG.............................................................................TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG.................................................................................................................................................................AGGAACAGTTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCACATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCTAGCCTAGATGCCCCTTTTCAGATGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCAATGATGGAGAAAGATCCTTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704857" ref_strand="+" ref_description="SGN-E704857 [FA25BH05]">
      <seq>ggtgcttcagaggaacaactagattttcctgttctttacgcttcagctaaagaaggatgggcatcttccatatatacaaaaagtcctcctgatgtgaaggatatgtcacaattgctcaatgctattgttgggcatgttcctccaccgagtgccagcctagatgccccttttcagatgttggtttccatgatggagaaagatccttatctcggtcgtgttttgacgggtcgtgtaacttgtggagttgttcgtgttggtgataaagtacaagggctgaagaacacagacaatggaactgtaaaaattgaagaagggaaggttgtaaagctgatgaaaaagaagggtatgagagcagatccagttgatagtgctggtgcaggtgacatagtgtccttggcaggtttgtcaagtccaacaattggacacacagttgcgaatgcagaggttatgacagcgctgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagtacgtcagaatcatatgaagtgcagggtagaggtgaacttcagttacgtatcttaattgagaacatgagacgtgaaggatttgagctctctgtctccccacctaaagtcatgtacaaagtagagaaaggtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="33379" stop="42923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33514" g_stop="33523" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161">
            <donor d_prob="0.982" d_score="0.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33685" g_stop="33854" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="180" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33855" i_stop="37921" i_length="4067">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37922" g_stop="38059" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="318" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38060" i_stop="38663" i_length="604">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38664" g_stop="38789" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="444" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="543" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="664" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="728" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="42602" g_stop="42623" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="750" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E704857" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33514" e_stop="33523"/>
          <exon e_start="33685" e_stop="33854"/>
          <exon e_start="37922" e_stop="38059"/>
          <exon e_start="38664" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGCTTCAGGTTCTAGAAAATTACTTTCATAAAAATTTCCAAGTTCCTTTCTTCTAGTCAGTTTGCTTGGACCTCTTCCTCCCTCCATACATAACTACATATTTAATAACTTCTATGCATTTGAAATTTAAGTCAACCTTTCTGATCGAACTTGTTTTATTCTATTCCAGAGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTGGTTAGTATTGCATTTGCATTTCTTAGTTCATATGTTGTATTGAGATAAATGATTTAGGTGAATAGCCATTTATGCAACTTCGCAAAATTAAACGTAGCAAGTGCCAAAGCTGGTAATAATTCTCATATATTTCAGCTTACGTACATGTAGCTATTGTACATTTTGCTGTACTTTGTTGATTACCTCCTTTTTTCCAAGTACCACTTCCATGGCCCATTTGTAAGAAATTCGTGCTTGCTTTGTTTTCCTAAAGAAATATTTTACTTAAATTCCTTTATAATTGGCTAGAGGTATTGCAGATGGAGAAGTTGCTGAATGCTTATTATGAGAGTCTTAGAAGTAAGATGCGTGTTAATATTCATTTGGTGATTAAGGGAATATATGTAAGATAGAAGTGAATACACGATTTAGTGGCTGTTATCTTTTATAATTGAAAAATAATCTAATGTCTCATTGATTTTGAGAAAGAAATCGTTGGAGGTAGATTAAGAAGTGGTGTTGTGTCGAGACCAGAACTAATCTAGATAAATTTATACTGGATATAATGTTGTAAGAAGAGTTGATGAACATACCTTTATGAGTGGAGACACTTTGCTTAAACAATCAATCAAAAGAAGCCTATGTGAGGAAAAAGTCAGGCAGGCTGTATAAATCTAAACACCTAGCCTGGTAATGATATTTTTTGCCTTGGGCCTAGGCCCGCACGACTTTAAGATGTATCACTAGTTGGTAAGGTCTGCTTACTCATATACCTAACATATCTCTTGTATTTTATCGATGTGGGATCTCTTATCTTAAGCTAGGGCATCACATAAATCCCTTTATGGACTCAACCTCCTAGTTGAGGTTTGCCCCACTTTATGGAATTTGCTTAGACTCAACCTTGAGTTTTGTCCCGCTTTACTTGGATTTTTGCGAAAAATCAGTTGAACTTTGGCACACATTGACAAGGCTGACATATGAGTGGCTCTGATTCCATTGGGACCACTAGTTAGTTCTCATAGCATCAGGGCCTCTCGAGAGGTCCATTAGACTCTACATATTTTTGGGCCATTTATCCAACATCCAACCCCTTTAATGCCCTTGGTTACAAGCGAATGTTAGTTGGCTCAACAACGTAATGTTAGGTCATTCATATTCTTATATCAAAATTCTCAAATGAGTCGTGCTTATGATCTTTCACCCTAAAGCTCTTTCAGTGATCTTTTTTTAGTTTTGAGAGTGATGTTGATAGTAGTTGTGTGATGATAGATAACAATGGGTTGGTGTTTCTTATTGTGACGGTGATGATGCGCTTATTCCATCTAAAGGTTACAAATATGGAGGAAGAAGGGGATGAGGTTTTAGGATGAGTAATAGTTAGATGAGAGTAATTAGGCTGTTTCTGGGTAGTAAGAAGTGAAATTTTAGTTGGTAGAGGTGATCAGAGAACGAGGAATTCTTAGAAGGATTGGCTAGTAGATTCCACAGAGTGGTTATAGTTCCAGGCTTGAATGTGGCATTGATAACACGTGGATGAATGAATGATGCATTAGGTACTTCTTGATTGGAACTCGAAGTTTATTTAATAGGTGATAAGGAGTAGTATTCTTAGGATTATTTCCCATATATAATAAGAGTAAATCCTTTCCTTCCCATGCTCTGTTCAACAATCATTCGAGGACGTAGGATTCCAAGGGGATATATTACATCCCAAAAGTTTCTAAGCTAAGGTTCAAACCATTCTTCATTTGTGTATAAGGTCGTATCGTGTGATTCGTAAATTATTCTTGGGGGTTGATGTCAATTATTTAGTGTGTGAATGAATTTGGTTGAGTTAAGGTTACTAGTAATATACTAGTTACCAAAAAAAGGAATTAAGGTTATTAGAATTCCTCTAGCACAAAGTTTGATTGAAGGCTTCCTTGTCGATTGAGTTTTGATATAAGATTCTACTTAGGTTAACTTCAAAAGATCATATCTTTTAGAATATGACGAGTTAGGTGACACATAATTTATCAAATTAAAGGTATTTGAGTCTTCCTTCCAACACTATCAAATTTGCATCATTCAGAGTTTGGAGTAGAGAGTTATAATCATTTACTAGTCTGATGACATGCAGTGGAGTATAGAGTTATAATCATTTTAGTAATTTGATGCATGCGGTGACGCTTTGGCCGGCCGGAAAACACTAAAAGTTGTCATTTTTGTCGTTGTACCCCTAAGATAAACCTAAACAGATTTCTTAACCAATAAAATGCCCAAAACAATCAGATTTTCATCTCTTAATCCTCCAATTTCTTCTCTCTCAAACCCCAACGCAGAACCCCAAGGAAAATCAAAGCATAGGATTTCCAAACAAGATTCTTCCAAATCTTTTTCAATATTTATCTCCAAGGTAAGTCCTCTTCAAGAATTTCATTATTTCCAAGTTCCAACTCAAATTCCTTCATACGGTTATAAATCATTAATGAAAATCTTAATTCTTGGCCATAGGGTTTTCAAGAAACTAATTCAAGTATCTCAACAAAAGTTTTCTTGATTGTTCTCTTACGACTTCAAGTCTTCCAATCAAGTTCCTTTTTCTAACTTCTTCAAGAACTTTGTTCTTTTATGTAAGACTATTAATAGTGTTGGACTTGTTCGTCCTCATGCCTTTCGTCTAAATTCAGTCAACAATAGTTATGCTTAGTCAACAATATGGTTCATGTGACTTTTTTAGGATAAAACCCTAAACATAACTTTTGTCGGCTAAATTTAGATGTAGGGCGTAAGTACGAACTAGTCCAACACTATGAATAGCCTTACATACCTAGAAGAATAAAGTTCATGAAGAAGTTTGAAAAATAACTTGATTGAAAGACTTGAAATCCTAGCTTTAATGAGAATGATCAAGAAAATCTTTATTGATATTCTTGAATTATTTACTTGAAAACTCTATGGCCAAGAATTAAGATTTTCATTAATGATTCATAATTGTAGGAAGGAATTTGAGTTGAAATTAATGAAATTCTAGGACTTACCTTGAAAAAGATTTGAAAGAATCTTGCTTGGAAGTCTTATGCTTTGATTTTATTTAGGGTTTGATAGAGAAGAGAATGTGAGATGAAAATCTGATTGTTTTCGGCCTTTTATTAGTCATTAAATCCGTTTTCTGTCTTCTTAGGGACAAAACAACCCTTTTTAGTGTTTTCCCGTTGGTTAAAACGTCACTGAATGCTCAAATCAGTTAAAAATGATTGTATCTCTCTATTTCAAATAATGCAAACTTGATGGCGTAGGAAAGAAGACACAAATACTTTTAATTTGACAGGTTACGGGGCACGTAACTCTTCATATTGTAAAAGATATGATCATTTGAAGTTGAGCAAAGTAGATCTTATATCAAAACTCAATCGATATGGAAACTTCCAACTCATCTTTATGCTAGGCTATTCTAGTGACTTTAATCCAAATCAATTCCCGCACTAAATAATGGACACCTAAGAACAATTTAAGAATCACTCGATAGACCTTATAATACACAAATGAAGAATGTTTCAGGTCATAACTTGGAAATTTTCGGGGTGTTACAATAAAGACAGGAAAGAAAGAATTTTGGTCAATTCACCAATAGGTGAGAAGTCATTTCAAACAGATGAAGAGGGGGGAGTAGTAAGGTGCTCAAGATTTAGGATTTGTACAAAAGAGCTGAAAGATTCCTCTGACCACTTATCTGATCCATACGGTTCCTTTCGAAGAATCTAGTCAAAAGATTCCTCTGACCACTTTTTATCAAATACAACAGAGGAGGTGATTTTAGACCTTGCCTAGTGGCTAGGTTGTCCTCTTTGAAAGGTAATTTGCAACTTAAGAAATAAGGTCCTCCATCTTTGTTCGACTCATTGGATCAACTTTTTACGTCTTGGGCCCTAATTAGATGTACTGTTCCATTGAAGGACCGCTTATTGTTCATATTGGATAACTTTCTTTATTTTCTTGGGGTTCACATTTGTTTGATGATTTTCTATTCTTGATCCTTTCAGAATCCTTGTACTTCTGTTTTTTATGTGCCTTGAGAAGATACTATGCTTAATAGTTGCTTTCAGGTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAGGTCTGTTGTCTCCAGAACTAAGGGGAAATCTTCTCTGTACCATTTTTGTAACTTAAGTATGTTTTAAGATGCTAGAGGGATATTTGAAAATCTAGTAAATTGTCATGTATATAGTCATCAAATAATTTTTCGAATTTTGGCAAAATTTGAGGTAATCAAACTAAATTGAACTCCACAACACGGGTAACTATGGTGTCAAATAATCAAAACATGCATCAGAGAATTAGGTGTAACAAAATTTTAATCATGTGATATGTTTCTCTGGTACTTTGACTAACAGAGGAGATTAATAACTTAAATAATCTATTTTACGAGGTGTCAATTATAACTTCCATGACTGTCACAGGCAACTTTATTATGTGTCAGTAAGTCATTTTTTAGAGGAAAGCTATGGTTATTGATAGCTCATATAGATTCGGATGAAGGTATTTTAGCACTCAAAACGACTTATTTCAAGCTTGAATGTTTAGGACTATATTTAGGATCTATTTTAGTTATTTACTTATTATTGGAATTCTAAGCCCTGAGCTAGTGCCATGCTTTGAAATTGTCATCTAATTTTCATTTCTGTTTCTTTCTTGTTTACTGGCCTAAACTTTCATAGGTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACT</genome_strand>
        <mrna_strand>GGTGCTTCAG.................................................................................................................................................................AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAC........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602002" ref_strand="+" ref_description="SGN-E602002 [55054]">
      <seq>gagaaagatccttatcttggtcgtgttttgacgggtcgtgtaacttgtggagttgttcgtgttggtgataaagtacaagggctgaagaacacagacaatggaactgtaaaaattgaagaaggaaaggttgtaaagctgatgaaaaagaagggtatgagagcagatccagtagatagtgctggtgcaggtgacatagtgtccatggcaggtttgtcaagtccgacaattggacacacagttgcgaatgcagaggttacgacagcgttgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgactggagggaaaattggtgaccggctgctagctgaatcagaaaccaatcttgccataaatgttctccccagtacgtcagaatcatttgaagtgcagggtagaggtgaacttcaattaggtatcttaattgagaacatgagacgtgaaggatttgagctctccgtctccccacctaaagtcatgtacaaagtagagaaaggtacttaagcttgagccaattgaagaagtgactattgaggttgattgacgaagcacgtaaggtttcggtcatggaagacactttctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="37634" stop="42991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37934" g_stop="38059" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38060" i_stop="38663" i_length="604">
            <donor d_prob="0.940" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38664" g_stop="38789" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="252" r_length="126" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="351" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="472" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.978" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="536" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="592" r_length="56" r_score="0.964"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.77"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="42744" g_stop="42787" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="641" r_length="49" r_score="0.773"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E602002" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E602002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37934" e_stop="38059"/>
          <exon e_start="38664" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAGGTCTGTTGTCTCCAGAACTAAGGGGAAATCTTCTCTGTACCATTTTTGTAACTTAAGTATGTTTTAAGATGCTAGAGGGATATTTGAAAATCTAGTAAATTGTCATGTATATAGTCATCAAATAATTTTTCGAATTTTGGCAAAATTTGAGGTAATCAAACTAAATTGAACTCCACAACACGGGTAACTATGGTGTCAAATAATCAAAACATGCATCAGAGAATTAGGTGTAACAAAATTTTAATCATGTGATATGTTTCTCTGGTACTTTGACTAACAGAGGAGATTAATAACTTAAATAATCTATTTTACGAGGTGTCAATTATAACTTCCATGACTGTCACAGGCAACTTTATTATGTGTCAGTAAGTCATTTTTTAGAGGAAAGCTATGGTTATTGATAGCTCATATAGATTCGGATGAAGGTATTTTAGCACTCAAAACGACTTATTTCAAGCTTGAATGTTTAGGACTATATTTAGGATCTATTTTAGTTATTTACTTATTATTGGAATTCTAAGCCCTGAGCTAGTGCCATGCTTTGAAATTGTCATCTAATTTTCATTTCTGTTTCTTTCTTGTTTACTGGCCTAAACTTTCATAGGTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTAC-TAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGA-TGACG-AGCACGT-AGGTTT-GGTCATGGAAG-CACTTTCTCA</genome_strand>
        <mrna_strand>GAGAAAGATCCTTATCTTGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTAGATAGTGCTGGTGCAGGTGACATAGTGTCCATGGCAGGTTTGTCAAGTCCGACAATTGGACACACAGTTGCGAATGCAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGACAGCGTTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACCAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATTTGAAGTGCAGGGTAGAGGTGAACTTCAATTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCCGTCTCCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACTTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATTGACGAAGCACGTAAGGTTTCGGTCATGGAAGACACTTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257315" ref_strand="+" ref_description="SGN-E257315 [cLEG-46-F16]">
      <seq>ccagttgatagtgctggtgcaggtgacatagtgtccttggcaggtttgtcaagtccaacaattggacacacagttgcgaatgcagaggttatgacagcgctgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagtacgtcagaatcatatgaagtgcagggtagaggtgaacttcagttaggtatcttaattgagaacatgagacgtgaaggatttgagctctctgtctccccacctaaagtcatgtacaaagtagagaaaggtactaagcttgagccaattgaagaagtgactattgaggttgatgacgagcacgtaggtttggtcatggaagcactttctcacaggcgaggtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtccttcaagagggctagtgggctatagaagcgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgnaaaatatcgtggtcctctttggaatgtcanggaaggagttctagtatcaatggggcgtggggttatcactgctcatgcactgatggggttagaaacctcgtggagttctctttgtggcacctgcaatggagacatatgatggcatgattattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="38403" stop="46625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38703" g_stop="38789" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="186" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="307" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="371" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="426" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42744" g_stop="42868" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="551" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="625" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="43526" i_stop="44929" i_length="1404">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="44930" g_stop="44979" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="675" r_length="50" r_score="0.900"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="44980" i_stop="45841" i_length="862">
            <donor d_prob="0.994" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="45842" g_stop="45928" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="763" r_length="88" r_score="0.943"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="45929" i_stop="46302" i_length="374">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="46303" g_stop="46325" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="786" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E257315" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38703" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
          <exon e_start="44930" e_stop="44979"/>
          <exon e_start="45842" e_stop="45928"/>
          <exon e_start="46303" e_stop="46325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTGAGGTTCTGGTTATGGTCCTTGTGATATATGTCTAGGCATATTCAACATTCAATTAATATATGTCCTTCAGGTCCTTCTGTATAGGGAATATGTTGCCTTTACACTATTTTAAAACTATATTACCCTCGTAATACATGGATATTAAATTATGCAACAGTTAATATAACTCTTTGTCCCTCAAAGATCAACATATTCTGATTTTGGTCCTTGTGATAACCACATTGACCTTCAACTAATTGAAATATGTATTTTGGAACCCTCTCGTTTGTGGAGTCACCACATTCAAATTGTTAATTGTTACATAATTTAATAATCATGAATTTTGAGGGTAATATAGTTCTAAAAATAGTGTAAATGTACCATATTTCCCTATATGGAAGGACATCTATTCTTTGAATGTTAAATATGCTTTTAGTCATATATCACAAGGACCAAAATTAGAGTTTACTAGTAACTTGAGAGGGGAAAGTTGATATCATCATGTATATGGTGGTCTGTGGAGAGGAAGGAATAGAAAATGTTTTGAAGATAGATCATGTGAACAATTATGTTTACTGGATTATAGAGTGATAGAAAATTTGTGATTTTTGTGATGAATTTTGAAGGTAGCCAGCATGTCCTAATGCTGAAGAATACAAACTTACCAATTCCCTCTCTCAAAAAAAAGTGTTAATACCCCTGATCTCGACAGTCAAGAGTAAAGAAAAGCTTGACTTGTCATGATGATTTCTGAATAGGCACTTCAAAATAAGTTATTTCCCATTTTAACTTTTAAGATTGATGCATGGGTAATCTGTGCATAAACACAATCAATTCACGGATACATATATAGAGAACAAATTTTCATTCCAAATGCCAAAGTTCTAATTCTTTTGGAGTTATTCTTTAGCCTTTTTCTGTCTATTTTAATTACATCTAATGCATGTTTGAATGCCTGCTATATGGTTTTAACGTTTCATTATTCTTAGCCTCTTTCTCCTTGGTGCAGCTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTAGTAAGCATCCTTACTACCCTGTAAAGACATGTTTGAGTTTTCTTTCTTTATTCCTCTTGCCATCTTCAAGATGCTATTGTTTCATAATTGTGAAGTACAAATAGCGTGTCCCTCAGTTCTGCCAGGGATGTCTTTCATCTCCTGTTCTACTCAGCTTAATGTATGTTCAGCCAATTTCTACTTTAAATATTGTCACCGTTGCATAAATGTGTCCCTAACAAGTTAGTACTTTCTGTCTGTTGGCCTGTTACAACTTGTGACTTTCATGGTTCATAGTTACCATTTCTCATTTTCATGCCTTACAATGTGTTGCTGGTGTACCGGAGCTTGTATTCCAGTACTCTCCAGAATGGTCTTCTTGAGATCCTTTAACATTCTTACCATGTTTAAGAGGCTAGGAGCCTGTTTGGATTGACTTAAAAGTTGGTCAAGCCATTTTTAGCTTTTGTAAGTATTTGACAAGGTTAAAAATAACTTAAAAAAAAGTTAAAAAATCAAAAGTAGGTCTCCCCTGGTTTTTATTTTGACTTAAAAGTCATTCAAGTTTGACTTTTTATTTTTTGACTTGAAACGAGATCTAGGTCCGAATAAATATAACATTTTTCTCTCAAAACATCTTTAATTGATCCCAAAATTCCCTTGAATTTTATGTTCTCTTCCAATTGTCTAGTATATTTGTTATGAGTACTTCAAATGCCGCTTCCCAGTAGCCTTTTGAGGCAGTTTAGCTCAGATTTGAACATGTATAAAAAATCGTCATATCACACTTGTATTTGATATTATATCTTCTGTTTTTCGACAAAGGATATATATATCTCCAGTTTCAATTTGTGGATAACTGTACCTCCTATTGGTTGAACAGGTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAG-AACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAGGTGATTCAATTGAACTTTTTGTCCTAATTTCTTTCCTTAGAAGTAGTAAAAAGAGTATCAACCTTCATTAACTACCAAAATTTTTTGTGATCTCAAATATGCATGACCTAGTACTGATAGTTTTGATGTTGATGTCATTCCAGTTGTGATCACTTAAAAGTGGTGATTAGGAGATATTTTATCTGTGGAATGTATTATATATTACAGGACCAGAGTCCTCGCAATTTAAAGGCTTATAAAATTCGAAGTGTTGAAGTAAAGATAGAAAACAATGTGTATACTATCAGGGATCTTGATGATAGCGTTGTCAATCACATGCTCTTTTGAAGAATATAAAAACACTGTTACCTTACTTTGTCTTGGATAATATGCAGACATATGATGGCATGATTATTGG</genome_strand>
        <mrna_strand>CCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGNAAAATATCGTGGTCCTCTTTGGAATGTCANGGAAGGAGTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAATGGGGCGTGGGGTTATCACTGCTCATGCACTGATGGGGTTAGAAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAG......................................................................................................................................................................................................................................................................................................................................................................................ACATATGATGGCATGATTATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E255186" ref_strand="+" ref_description="SGN-E255186 [cLEG-31-I22]">
      <seq>ccagttgatagtgctggtgcatgtgacatagtgtccttggcaggtttgtcaagtccaacaattggacacacagttgcgaatgcagaggttatgacagcgctgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagtacgtcagaatcatatgaagtgcacggtagaggtgaacttcagttaggtatcttaattgagaacatgatacgtgaaggatttgagctctctgtcttcccacctaaagttatgtacaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="38403" stop="42489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38703" g_stop="38789" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="186" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="307" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="371" r_length="64" r_score="0.953"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42188" i_stop="42314" i_length="127">
            <donor d_prob="0.991" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42315" g_stop="42323" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="379" r_length="8" r_score="0.556"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E255186" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38703" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42315" e_stop="42323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAG</genome_strand>
        <mrna_strand>CCAGTTGATAGTGCTGGTGCATGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCACGGTAGAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGATACGTGAAGGATTTGAGCTCTCTGTCTTCCCACCTAAAGTTAT...............................................................................................................................G-TACAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251766" ref_strand="+" ref_description="SGN-E251766 [cLEG-15-P3]">
      <seq>gtcaagtccaacaattggacacacagttgcgaatgcacaggttatgacagcgctgcccacagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagtacgtcagaatcatatgaagtgcacggtagaggtgaacttcagttaggtatcttaattgacaacatgagacgtgaaggatttgagctctctgtcttcccacctaaagtcatgtacaaagtaaagaaaggtactaagcttgagccaattgaagaagtgactattgaggttgatgacgagcacgtatgttcggtcatggaagcactttctcacaggcgaggcgaagttactgacatgggccctgttgctggcagcatgggaaggactagaatgtgtctgacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="38450" stop="43159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38750" g_stop="38789" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39935" g_stop="40033" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="139" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="260" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="324" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="379" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42744" g_stop="42859" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="495" r_length="116" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E251766" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38750" e_stop="38789"/>
          <exon e_start="39935" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAGGTATGTGACTTCATCATTTAACGATCCAACACAATTCTTTTTGTTTCTAAGTCGTGTCATTTGTTCTATTGATCTTTTTGATCTGGGAATCTCGTCATTGTGTGGGTGGAAATTCTACTGGCATTATTTTATATAGGGAAATTGTACAAGTACCCCCTCAACCTATGCCCAAAATCCCAGAGACACACTTATACTATACTAAGGTCCAATTACCCCCCTGAACTTATTTTATAAGTAATTTTCTACCTCTTTTTAGCCAACGTGGCACTAGTTTAAAAAAAAAGTCAACCATCATTGGGCCCACAAGATAGTGCCACGTAGGTCAAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGTAATAGGACCTTAATATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGATTGAGGGGGTACTTGGGCATTATCCCTTTTATATAAGATAAGTTTCACATCAAAGAAGGAAAATGCTGTGCACAATAGGAAAAGGCACTTCAGTAGCATACACAAGCGTTCCTAACATGAAACCCTATGACCCCTGAAGAAAGTCATGACTTCTCCTAGATAAACATCGAGAGCGTTGTGTTTTGAATGTGGAAATTAACCTTTTTATGCCTACAGACCAACTTACACTGTCTAAAGTGATACTATTGGGGCTGTAGGTAAATTAATTACAATAGGAAGTCGTTTAAGTGCAATATGATGGTTTAAGTAATAATTGTTAAATGGGCTAGGTGTCATCTTTCATTCCTTAAGTTGTACATGCTTAAAACTGAAATCAATGTACAGAGATATCCTCGATTGTGCAAGTCTAATCAGCTACTACCGACTGTTTAATTTAATATATATTTTGGTCAAATTGATTCAGAATTAAGACCAAGGAATAGTTGATATCTAAGTTGTTATGGTTACCACTGTTTTACTTCCTTCTCCTAAATTTGACTAGTCTTTGTTAACTTCATTAGATGATACACTTTAGTACTTGTTACTTGTTTAATAATATTTTCCTGATTGTGTTTCCTTTTTTATGTCCACGTGGTATGTGGTTCTTGATCTTGTAACATGTCTCTGGCACTGAATTCTTTGTGAGCTAAATTTCTTAACCTTTTCTGGAACTTCTCTGAAACTTGATAGGTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATG</genome_strand>
        <mrna_strand>GTCAAGTCCAACAATTGGACACACAGTTGCGAATGCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCACGGTAGAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGACAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTTCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAAAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTATGTTCGGTCATGGAAGCACTTTCTCACAGGCGAGGCGAAGTTACTGACATGGGCCCTGTTGCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272097" ref_strand="+" ref_description="SGN-E272097 [cLEN-4-E15]">
      <seq>acagttgtgcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggtgaccggctgctagctgaatcagaaacgaatcttgccataaatgttctccccagcccgtcagaatcatatgaagtgcagggtagaggtgaacttcagttaggtatcttaattgagaacatgagacgtgaaggatttgagctctctgtctccccacctaaagtcatgtacaaagtagagaaaggtactaagcttgagccaattgaagaagtgactattgaggttgatgacgagcacgtaggtttggtcatggaagcactttctcacaggcgaggtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtccttcaagagggctagtgggctatagaagcgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="39653" stop="43830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39953" g_stop="40033" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="202" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="266" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="321" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42744" g_stop="42868" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="446" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="520" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E272097" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39953" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA</genome_strand>
        <mrna_strand>ACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGCCCGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266058" ref_strand="+" ref_description="SGN-E266058 [cLEI-6-K17]">
      <seq>gcttgacccccctaccatctccatgactttcggtgtcaatgattctcccttagctggttctgatggtattcatttgaccggagggaaaattggagaccggctgctagctgaatcagaaactaatcttgccataaatgttctccccagtacgtcagaatcatatgaaatgcacggtaaaggtgaacttcagttaggtatcttaattgagaacatgagacgtgaaggatttgagctctctgtctccccacctcaagtcatgtacaaagtagagaaaggtactaagcttgagccaattgaagaagtgactattgaggttgatgacgagcacgtacgtttggtcatggaagcactttctcacaggcgaggtgaaattactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="39661" stop="43159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39961" g_stop="40033" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41835" g_stop="41955" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="194" r_length="121" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42124" g_stop="42187" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="258" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42602" g_stop="42656" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="313" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42744" g_stop="42859" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="429" r_length="116" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E266058" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39961" e_stop="40033"/>
          <exon e_start="41835" e_stop="41955"/>
          <exon e_start="42124" e_stop="42187"/>
          <exon e_start="42602" e_stop="42656"/>
          <exon e_start="42744" e_stop="42859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCATGTAAGTATATAATTTTCCCTGCTTATTTCCTATTTTTGAGATCTTTGTGTTTAGCTGCTTCTGCTTTCCAGCTGCATGTTCTGTGGAGGGTCATAGTTGAGGTCTTTTTCCCCTGTAATTCTGTGAGAATGTATCCGAAAGTGACACCCAACTCATGCATTATTTTTGTGTCAAAGCATCTAATGTTCTTTGTAAATTTTGATCTTAATTAGAATATTTTTTTTTTAATTTGATCATTTCTTTTGATTGAGGTTGATAATCTATAGTTTTGAATTTTGAGCAAGGACATGGAGGTGAGGTCTCTATCTTAAAGAAATAGATCAAATGGTAGTCTGAGACAAACTTATGATAGAGTTGTTGGCAGATGTATCAGTCCATAGGAAGAATAACTGAAGCTAGGATGTTGAATTTTGGGGATACTATGATAATTGACAGCCTCTGTAATTTGGCAGTAGCAAAAGTAGTACTGGAAAATGGATTAAAGATGCAGGTATCCCCTGTTAAATACGGGTTGGATAAATGATTTGTGTAAACTGGATCATATCCATGTAACCAACCATAATATATGGATATCGATAATGCAACTCACTTTGAATGTGAAGAATCTAGCTGCCTGAAAGGTGGAAAACTTTTACTTCATCGTCAGTCCTCTTGAACTGTTCTTTAACTTAAACATAATAGCTGAAGACCTTCATCAACAAAACATGAACAACACTTATGTCATATAGAGCATGAAAAAAGTGAGACAGTAAGTCACTGAGTTTTAACTTTATATTTCATAAGCCAAGAATCAGCCGCAAAATTGGGCAGCTGGTTCCAGTTCCAAAATGCGATACGTGAAGATATAAGTTATTAATATTATAATATCCGTGGAGGAGAATAGGGGGGGGGGGGGTTGAAGATATCTATCATATGTATATCGGTTCTTTGTTTTTGAAGTTTTGCTGACTTTTCATGTCTTCTACAGTCTACACCAAGCAATGGTTAATGTAGATACTCGTATTAATCCGATTTTTATCTGTCGTAGTTATGGATGGTTGCATAATTTATCCATTTTGTCTAAACTGTTTCAACCTGTCCATATCTGATCCAACCCACCCATTTGCCAGCACTAGTTCATTGATTTCTCTTATAACTTGCCGTAATTGTATGCTTTACTATAACAAAGACTTATTATTTCTTCCTTACTTCCTGTAGCATAAACTGAAATAGACTGTAGTTATTGTTATTGAAGGGTTATTGTTCTACAGTTTTAAAAACGTTTTCTGGAAAACATGAAGCATATAATTGGTAATGATAATGAAGATCTATAGGATAGGGTGGTCCGTATGCAGAGTAATTGATGGGTTTTTCAGATGTCCAACAACAGCTACGCCTCAGTTTCTAATTAGTTGGGGTCGGCTATGTAAATCCTCATTTTGTCGTTTCAAATGCCTCTGCTGGCTTTTTATTTGATACATGTGTGAAGTATTAAACTTATATAGGTTATTGAAATATGTGGGAAATGAAGTAAACTCATAGATTGTTTCTTCTAATCAGCAAGCATTCACTTAGAGGACTGCTACTATTTTTGAAATATAGCATTCCGGAACCAGTGTCCATTGTATCAACACATTATTGAAGTTTTGAGCAGAGATTAGTTTTGGCCGGAAAGAAGAAGAGAGATGAGTCAATTCGGACTTCCAAAAAATTTCAGAAAGCATGAGTCCTTATTTTTTTTAACTGCCTGGGCAAATGCGAATGCTGAAACTACTGGTTCTTTCTTCTGGTGACTGTCTAAAATGTTCTGTACTTTTTATAGTTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAGGTGAGTTGTGTGGTGTAACAACCTACAACAATGTTGTCAGTATTTGTGCTCGTCTCATATGTTCATAAGGGACAAAATTAAACCGGATCAAGCAGTCCACTGAAATCTCTCGCTTGAATTTTACAAACCACCTAACTCTTCCTCTCTGTTTTCTCCTGTTCATAATAGGTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCATGTGAGCTCCTTTGTCCTTATTCTAGACTGGTTTGCTAGGAATCACATGTTGATATGCCTGCATACTCTTACTCTGTACTGTTAACTTGTGAATTGGTAAATGTTGTTATGATTACTCAATAATTCAGGAGATACAGAGCATACAGCAAAAAGGACCAGAGAATTATTTCCTATCATGGAATGGTCTTTTGATTAAAGCTTACCGGAACTAGACATACACTTCTACTCGCATATTCCAGTATATGCACATATTTACATATCTATGGTTGACAAGACATGTATAGTATCATTTAAGACAGTATTTTTTGTTGTGTCTTGAATGACCTAATGATATCTGTGCCATCAGTATCGATTATTCACCAGTAACCTTTGTGATAAGCTTCTAATATTGCATTTGCAATGTCTGTATGTTTAGGTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATG</genome_strand>
        <mrna_strand>GCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCGGAGGGAAAATTGGAGACCGGCTGCTAGCTGAATCAGAAACTAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAATGCACGGTAAAGGTGAACTTCAGTTAG........................................................................................................................................................................GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTCAAGTCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTACGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAATTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252308" ref_strand="+" ref_description="SGN-E252308 [cLEG-12-P5]">
      <seq>cttgagccaattgaagaagtgactattgaggttgatgacgagcacgtaggtgtggtcatggaagcactttctcacaggcgaggtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtccttcaagagggctagtgggctatagaagcgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgaaaaatatcgtggtcctcttggaaatgtcaggaaaggagttctagtatcaatgggccgtgggttaatcactgctcatgcactgatggggttagaacctcgtggagttctctttgtggcacctgcaatggagacatatgatggcatgattattggagaacattctcgggatacagatcttgatgtcaatccggttaaggcaaaagaactcaacaatataaggtgcgctagcaaggatgagaacgtcaagttaactcctccccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="42327" stop="47314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42627" g_stop="42656" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42744" g_stop="42868" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="229" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43526" i_stop="44929" i_length="1404">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44930" g_stop="44979" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="279" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44980" i_stop="45841" i_length="862">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45842" g_stop="45928" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="366" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45929" i_stop="46302" i_length="374">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46303" g_stop="46353" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="417" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46354" i_stop="46428" i_length="75">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46429" g_stop="46512" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="501" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="552" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="46999" g_stop="47014" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="568" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E252308" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42627" e_stop="42656"/>
          <exon e_start="42744" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
          <exon e_start="44930" e_stop="44979"/>
          <exon e_start="45842" e_stop="45928"/>
          <exon e_start="46303" e_stop="46353"/>
          <exon e_start="46429" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCCAATTGAAGAAGTGACTATTGAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTGAGGTTCTGGTTATGGTCCTTGTGATATATGTCTAGGCATATTCAACATTCAATTAATATATGTCCTTCAGGTCCTTCTGTATAGGGAATATGTTGCCTTTACACTATTTTAAAACTATATTACCCTCGTAATACATGGATATTAAATTATGCAACAGTTAATATAACTCTTTGTCCCTCAAAGATCAACATATTCTGATTTTGGTCCTTGTGATAACCACATTGACCTTCAACTAATTGAAATATGTATTTTGGAACCCTCTCGTTTGTGGAGTCACCACATTCAAATTGTTAATTGTTACATAATTTAATAATCATGAATTTTGAGGGTAATATAGTTCTAAAAATAGTGTAAATGTACCATATTTCCCTATATGGAAGGACATCTATTCTTTGAATGTTAAATATGCTTTTAGTCATATATCACAAGGACCAAAATTAGAGTTTACTAGTAACTTGAGAGGGGAAAGTTGATATCATCATGTATATGGTGGTCTGTGGAGAGGAAGGAATAGAAAATGTTTTGAAGATAGATCATGTGAACAATTATGTTTACTGGATTATAGAGTGATAGAAAATTTGTGATTTTTGTGATGAATTTTGAAGGTAGCCAGCATGTCCTAATGCTGAAGAATACAAACTTACCAATTCCCTCTCTCAAAAAAAAGTGTTAATACCCCTGATCTCGACAGTCAAGAGTAAAGAAAAGCTTGACTTGTCATGATGATTTCTGAATAGGCACTTCAAAATAAGTTATTTCCCATTTTAACTTTTAAGATTGATGCATGGGTAATCTGTGCATAAACACAATCAATTCACGGATACATATATAGAGAACAAATTTTCATTCCAAATGCCAAAGTTCTAATTCTTTTGGAGTTATTCTTTAGCCTTTTTCTGTCTATTTTAATTACATCTAATGCATGTTTGAATGCCTGCTATATGGTTTTAACGTTTCATTATTCTTAGCCTCTTTCTCCTTGGTGCAGCTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTAGTAAGCATCCTTACTACCCTGTAAAGACATGTTTGAGTTTTCTTTCTTTATTCCTCTTGCCATCTTCAAGATGCTATTGTTTCATAATTGTGAAGTACAAATAGCGTGTCCCTCAGTTCTGCCAGGGATGTCTTTCATCTCCTGTTCTACTCAGCTTAATGTATGTTCAGCCAATTTCTACTTTAAATATTGTCACCGTTGCATAAATGTGTCCCTAACAAGTTAGTACTTTCTGTCTGTTGGCCTGTTACAACTTGTGACTTTCATGGTTCATAGTTACCATTTCTCATTTTCATGCCTTACAATGTGTTGCTGGTGTACCGGAGCTTGTATTCCAGTACTCTCCAGAATGGTCTTCTTGAGATCCTTTAACATTCTTACCATGTTTAAGAGGCTAGGAGCCTGTTTGGATTGACTTAAAAGTTGGTCAAGCCATTTTTAGCTTTTGTAAGTATTTGACAAGGTTAAAAATAACTTAAAAAAAAGTTAAAAAATCAAAAGTAGGTCTCCCCTGGTTTTTATTTTGACTTAAAAGTCATTCAAGTTTGACTTTTTATTTTTTGACTTGAAACGAGATCTAGGTCCGAATAAATATAACATTTTTCTCTCAAAACATCTTTAATTGATCCCAAAATTCCCTTGAATTTTATGTTCTCTTCCAATTGTCTAGTATATTTGTTATGAGTACTTCAAATGCCGCTTCCCAGTAGCCTTTTGAGGCAGTTTAGCTCAGATTTGAACATGTATAAAAAATCGTCATATCACACTTGTATTTGATATTATATCTTCTGTTTTTCGACAAAGGATATATATATCTCCAGTTTCAATTTGTGGATAACTGTACCTCCTATTGGTTGAACAGGTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAGGTGATTCAATTGAACTTTTTGTCCTAATTTCTTTCCTTAGAAGTAGTAAAAAGAGTATCAACCTTCATTAACTACCAAAATTTTTTGTGATCTCAAATATGCATGACCTAGTACTGATAGTTTTGATGTTGATGTCATTCCAGTTGTGATCACTTAAAAGTGGTGATTAGGAGATATTTTATCTGTGGAATGTATTATATATTACAGGACCAGAGTCCTCGCAATTTAAAGGCTTATAAAATTCGAAGTGTTGAAGTAAAGATAGAAAACAATGTGTATACTATCAGGGATCTTGATGATAGCGTTGTCAATCACATGCTCTTTTGAAGAATATAAAAACACTGTTACCTTACTTTGTCTTGGATAATATGCAGACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGATGTAAGGAGCTGTTATTTCATTTCTTACAGTGTTTGTCATGTGCATTTGTGACTTTTGGGTGATTGCATGAAACAGGTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCA</genome_strand>
        <mrna_strand>CTTGAGCCAATTGAAGAAGTGACTATTGAG.......................................................................................GTTGATGACGAGCACGTAGGTGTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAG......................................................................................................................................................................................................................................................................................................................................................................................ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGAT...........................................................................GTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E538896" ref_strand="+" ref_description="SGN-E538896 [TUS-58-G2](-)">
      <seq>gaggttgatgacgagcacgtagtttgggtcatggaagcactttctcacaggcgaggtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtcctcnaagagggctagtgggctatagaagcgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgaaaaatatcgtggtcctcttggaaatgtcaggaaaggagttctagtatcaatgggccgtgggttaatcactgctcatgcactgatggggttagaacctcgtggagttctctttgtggcacctgcaatggagacatatgatggcatgattattggagaacattctcgggatacagatcttgatgtcaatccggttaaggcaaaagaactcaacaatataaggtgcgctagcaaggatgagaacgtcaagttaactcctccccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagccattaggctaagaaagagatacttggaagtgaacaagagaaaatcaatgagcaagaggcccaaggattgaagcatttttctcacatttgtataaatgaaatttaatttatcttcacctctacttaaatgttcctcatttatacacacatctttacacttataatagatagggaaaaattgtataacataaatattctttttcaagcactctatcgggaatgtatttcagcgtaacacagcttattaaaagccgagttaccgaaaantataaatgcttgaatgcaataaaattttgtcctacttttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="42442" stop="47620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42654" g_stop="42656" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42744" g_stop="42868" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="128" r_length="125" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="202" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43526" i_stop="44929" i_length="1404">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44930" g_stop="44979" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="252" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44980" i_stop="45841" i_length="862">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45842" g_stop="45928" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="339" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45929" i_stop="46302" i_length="374">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46303" g_stop="46353" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="390" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46354" i_stop="46428" i_length="75">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46429" g_stop="46512" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="474" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="525" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="46999" g_stop="47318" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="846" r_length="321" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="847" polyA_stop="856"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E538896" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42654" e_stop="42656"/>
          <exon e_start="42744" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
          <exon e_start="44930" e_stop="44979"/>
          <exon e_start="45842" e_stop="45928"/>
          <exon e_start="46303" e_stop="46353"/>
          <exon e_start="46429" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGTGCACTAGTCTGCATAAACCTACAGTATTGTCTTTTACTTATTCAGAATTTATACCAAACCTCTTGGGACCATCTTCTGTTTCCAGGTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTGAGGTTCTGGTTATGGTCCTTGTGATATATGTCTAGGCATATTCAACATTCAATTAATATATGTCCTTCAGGTCCTTCTGTATAGGGAATATGTTGCCTTTACACTATTTTAAAACTATATTACCCTCGTAATACATGGATATTAAATTATGCAACAGTTAATATAACTCTTTGTCCCTCAAAGATCAACATATTCTGATTTTGGTCCTTGTGATAACCACATTGACCTTCAACTAATTGAAATATGTATTTTGGAACCCTCTCGTTTGTGGAGTCACCACATTCAAATTGTTAATTGTTACATAATTTAATAATCATGAATTTTGAGGGTAATATAGTTCTAAAAATAGTGTAAATGTACCATATTTCCCTATATGGAAGGACATCTATTCTTTGAATGTTAAATATGCTTTTAGTCATATATCACAAGGACCAAAATTAGAGTTTACTAGTAACTTGAGAGGGGAAAGTTGATATCATCATGTATATGGTGGTCTGTGGAGAGGAAGGAATAGAAAATGTTTTGAAGATAGATCATGTGAACAATTATGTTTACTGGATTATAGAGTGATAGAAAATTTGTGATTTTTGTGATGAATTTTGAAGGTAGCCAGCATGTCCTAATGCTGAAGAATACAAACTTACCAATTCCCTCTCTCAAAAAAAAGTGTTAATACCCCTGATCTCGACAGTCAAGAGTAAAGAAAAGCTTGACTTGTCATGATGATTTCTGAATAGGCACTTCAAAATAAGTTATTTCCCATTTTAACTTTTAAGATTGATGCATGGGTAATCTGTGCATAAACACAATCAATTCACGGATACATATATAGAGAACAAATTTTCATTCCAAATGCCAAAGTTCTAATTCTTTTGGAGTTATTCTTTAGCCTTTTTCTGTCTATTTTAATTACATCTAATGCATGTTTGAATGCCTGCTATATGGTTTTAACGTTTCATTATTCTTAGCCTCTTTCTCCTTGGTGCAGCTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTAGTAAGCATCCTTACTACCCTGTAAAGACATGTTTGAGTTTTCTTTCTTTATTCCTCTTGCCATCTTCAAGATGCTATTGTTTCATAATTGTGAAGTACAAATAGCGTGTCCCTCAGTTCTGCCAGGGATGTCTTTCATCTCCTGTTCTACTCAGCTTAATGTATGTTCAGCCAATTTCTACTTTAAATATTGTCACCGTTGCATAAATGTGTCCCTAACAAGTTAGTACTTTCTGTCTGTTGGCCTGTTACAACTTGTGACTTTCATGGTTCATAGTTACCATTTCTCATTTTCATGCCTTACAATGTGTTGCTGGTGTACCGGAGCTTGTATTCCAGTACTCTCCAGAATGGTCTTCTTGAGATCCTTTAACATTCTTACCATGTTTAAGAGGCTAGGAGCCTGTTTGGATTGACTTAAAAGTTGGTCAAGCCATTTTTAGCTTTTGTAAGTATTTGACAAGGTTAAAAATAACTTAAAAAAAAGTTAAAAAATCAAAAGTAGGTCTCCCCTGGTTTTTATTTTGACTTAAAAGTCATTCAAGTTTGACTTTTTATTTTTTGACTTGAAACGAGATCTAGGTCCGAATAAATATAACATTTTTCTCTCAAAACATCTTTAATTGATCCCAAAATTCCCTTGAATTTTATGTTCTCTTCCAATTGTCTAGTATATTTGTTATGAGTACTTCAAATGCCGCTTCCCAGTAGCCTTTTGAGGCAGTTTAGCTCAGATTTGAACATGTATAAAAAATCGTCATATCACACTTGTATTTGATATTATATCTTCTGTTTTTCGACAAAGGATATATATATCTCCAGTTTCAATTTGTGGATAACTGTACCTCCTATTGGTTGAACAGGTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAGGTGATTCAATTGAACTTTTTGTCCTAATTTCTTTCCTTAGAAGTAGTAAAAAGAGTATCAACCTTCATTAACTACCAAAATTTTTTGTGATCTCAAATATGCATGACCTAGTACTGATAGTTTTGATGTTGATGTCATTCCAGTTGTGATCACTTAAAAGTGGTGATTAGGAGATATTTTATCTGTGGAATGTATTATATATTACAGGACCAGAGTCCTCGCAATTTAAAGGCTTATAAAATTCGAAGTGTTGAAGTAAAGATAGAAAACAATGTGTATACTATCAGGGATCTTGATGATAGCGTTGTCAATCACATGCTCTTTTGAAGAATATAAAAACACTGTTACCTTACTTTGTCTTGGATAATATGCAGACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGATGTAAGGAGCTGTTATTTCATTTCTTACAGTGTTTGTCATGTGCATTTGTGACTTTTGGGTGATTGCATGAAACAGGTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTATTTCAGCGTAACACAGCTTATTAAAAGCCGAGTTACCGAAAA-TATAAATGCTTGAATGCAATAAAATTTTGTCCTACTTTTAA</genome_strand>
        <mrna_strand>GAG.......................................................................................GTTGATGACGAGCACGTAGTTTGGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTCNAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAG......................................................................................................................................................................................................................................................................................................................................................................................ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGAT...........................................................................GTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTATTTCAGCGTAACACAGCTTATTAAAAGCCGAGTTACCGAAAANTATAAATGCTTGAATGCAATAAAATTTTGTCCTACTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E443444" ref_strand="+" ref_description="SGN-E443444 [cSTA-37-N6]">
      <seq>gtaggtttggtcatggaagccacctttctcaccaggcggggtgaggttacctgaccatgggcccctgttcctggcagcatgggaaggactagaatgtgtctgacatgtccttcaagagggctagtgggctatagaagtgtgttcagcagtgacacccgtggctctggatttatgcatcgggcttttctgagtatgcttttcaacttatcttactacttttctgacaagtttatctgacaatttctccaatgcacgtcacagtaggatctccatgcctatttatataatgatagcaaaactgcaaaagaaaaaggtaagtatgtgctagcaatatgtggatgtgagcgtgtcagctcagtcgaactttgtaacaacacattcttgtctggtattagatggttccagaaattatatgggtgttacaaatgtactcctctttatatccatgttctttctttgaatccaccttgggtaaaccatcccctttttctttcttaaaattatcctctgtgcttttggtcggctgaggttcttcatgagccagttttatctttgacagggagcagggaatttgcattcttagtccctcaaatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="42459" stop="44241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42759" g_stop="42868" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43452" g_stop="43941" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="597" r_length="481" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E443444" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42759" e_stop="42868"/>
          <exon e_start="43452" e_stop="43941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGGTTTGGTCATGGAAG-CA-CTTTCTCA-CAGGCGAGGTGAAGTTA-CTGA-CATGGG-CCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAG---AAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTG</genome_strand>
        <mrna_strand>GTAGGTTTGGTCATGGAAGCCACCTTTCTCACCAGGCGGGGTGAGGTTACCTGACCATGGGCCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGTGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGGGCTTTTCTGAGTATGCTTTTCAACTTATCTTACTACTTTTCTGACAAGTTTATCTGACAATTTCTCCAA----------TGCACGTCACAGTAGGATCTCCATGCCTATTTATATAATGATAGCAAAACTGCAAAAGAAAAAGGTAAGTATGTGCTAGCAATATGTGGATGTGAGCGTGTCAGCTCAGTCGAACTTTGTAACAACACATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACTCCTCTTTATA-TCCATGTTCTTTCTTTGAATCCACCTTGGGTAAACCATC-CCCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATTTGCATTCTTAGTCCCTCAAATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E695991" ref_strand="+" ref_description="SGN-E695991 [LH_Ea07P13](-)">
      <seq>gtgaagttactgacatgggccctgttcctggcagcatgggaaggactagaatgtgtttgacatgtccttcaagagggctagtgggctatagaagtgtgttcagcagtgacacccgtggctctggatttatgcatcgagcttttctgacttatgaaaaatatcgtggtcctcttggaaatgtcaggaaaggagttctagtatcaatgggccgtgggttaatcactgctcatgcactgatgggtttagaacatcgtggagtactctttgtggcacctgcaatggagacatatgatggcatgattattggagaacattctcgggatacagatcttgatgtcaatccggttaaggcaaaagaactcaacaatataaggtgcgctagcaaggatgagaacgtcaagttaactcctccccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagccattaggctaagaaagagatacttggaagtgaacaagagaaaatcaatgagcaagaggcccaaggactgaagcatttttctcacatttgtataaatgaaatttaatttatcttcacctctactttaatgttcctcatttatacacacatctttacacttatatagatagggaaaaattgtataacataaatattctttttcaagcactctatcggaaatgtatttttcagcgtaacccagaagggtaaaacgcagagttaccgaaaataaaatgcttctatacggaaaattttgtccaactttaacccttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="42496" stop="47538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42796" g_stop="42868" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43452" g_stop="43525" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="147" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43526" i_stop="44929" i_length="1404">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44930" g_stop="44979" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="197" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44980" i_stop="45841" i_length="862">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45842" g_stop="45928" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="284" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45929" i_stop="46302" i_length="374">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46303" g_stop="46353" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="335" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46354" i_stop="46428" i_length="75">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46429" g_stop="46512" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="419" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="470" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="46999" g_stop="47279" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="753" r_length="283" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="796" polyA_stop="812"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E695991" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42796" e_stop="42868"/>
          <exon e_start="43452" e_stop="43525"/>
          <exon e_start="44930" e_stop="44979"/>
          <exon e_start="45842" e_stop="45928"/>
          <exon e_start="46303" e_stop="46353"/>
          <exon e_start="46429" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAGGTATTTTTTCAGTTGTTCATTGCAGGTTTTATTACTGTACAGAGCATGATGATACATAATTAGAAGATTGGTTTTATCTCCCTCTCACTCTTTATCTCTGCCTTTCGGAATAGTATCCTGTTCATCCCTCCTTGCATTTCCTGGATAGAATTATGATACTGATTTCTCTTTTGATGTATACCGAATGGTAGTTATCTGAGCATTTTTTTGAGTAAAATAAAGTACTTAATAGCTACATTTATGAGTCTTATCTGGGCATATTGTTTGTTCTCTATCCTCCTTTTATCTTGTCTTTGTATTTCAAGGTATGCCTATCGACCTAGAAGTATGGGATTAAAATATGACTAGATTATTATTTGGTTAACAGAATGACAAAGCTAATTGCCAATTTGTTAAAATGATTAATCAATGCATTTTCTTCAAAGATCGTATTAGAGGCAACTAACAAATCTGTAGATTTCAGATTCATGCTACCTTTATATATTCACATTTCGCACCTGTTTGTATTCAGCATGTTCTCAATCTTGATGATTAATTTTGTTGTTAAGTTTGTCCTAATTTGAATTTTCCTGACCTATTGCAGAGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTGAGGTTCTGGTTATGGTCCTTGTGATATATGTCTAGGCATATTCAACATTCAATTAATATATGTCCTTCAGGTCCTTCTGTATAGGGAATATGTTGCCTTTACACTATTTTAAAACTATATTACCCTCGTAATACATGGATATTAAATTATGCAACAGTTAATATAACTCTTTGTCCCTCAAAGATCAACATATTCTGATTTTGGTCCTTGTGATAACCACATTGACCTTCAACTAATTGAAATATGTATTTTGGAACCCTCTCGTTTGTGGAGTCACCACATTCAAATTGTTAATTGTTACATAATTTAATAATCATGAATTTTGAGGGTAATATAGTTCTAAAAATAGTGTAAATGTACCATATTTCCCTATATGGAAGGACATCTATTCTTTGAATGTTAAATATGCTTTTAGTCATATATCACAAGGACCAAAATTAGAGTTTACTAGTAACTTGAGAGGGGAAAGTTGATATCATCATGTATATGGTGGTCTGTGGAGAGGAAGGAATAGAAAATGTTTTGAAGATAGATCATGTGAACAATTATGTTTACTGGATTATAGAGTGATAGAAAATTTGTGATTTTTGTGATGAATTTTGAAGGTAGCCAGCATGTCCTAATGCTGAAGAATACAAACTTACCAATTCCCTCTCTCAAAAAAAAGTGTTAATACCCCTGATCTCGACAGTCAAGAGTAAAGAAAAGCTTGACTTGTCATGATGATTTCTGAATAGGCACTTCAAAATAAGTTATTTCCCATTTTAACTTTTAAGATTGATGCATGGGTAATCTGTGCATAAACACAATCAATTCACGGATACATATATAGAGAACAAATTTTCATTCCAAATGCCAAAGTTCTAATTCTTTTGGAGTTATTCTTTAGCCTTTTTCTGTCTATTTTAATTACATCTAATGCATGTTTGAATGCCTGCTATATGGTTTTAACGTTTCATTATTCTTAGCCTCTTTCTCCTTGGTGCAGCTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTAGTAAGCATCCTTACTACCCTGTAAAGACATGTTTGAGTTTTCTTTCTTTATTCCTCTTGCCATCTTCAAGATGCTATTGTTTCATAATTGTGAAGTACAAATAGCGTGTCCCTCAGTTCTGCCAGGGATGTCTTTCATCTCCTGTTCTACTCAGCTTAATGTATGTTCAGCCAATTTCTACTTTAAATATTGTCACCGTTGCATAAATGTGTCCCTAACAAGTTAGTACTTTCTGTCTGTTGGCCTGTTACAACTTGTGACTTTCATGGTTCATAGTTACCATTTCTCATTTTCATGCCTTACAATGTGTTGCTGGTGTACCGGAGCTTGTATTCCAGTACTCTCCAGAATGGTCTTCTTGAGATCCTTTAACATTCTTACCATGTTTAAGAGGCTAGGAGCCTGTTTGGATTGACTTAAAAGTTGGTCAAGCCATTTTTAGCTTTTGTAAGTATTTGACAAGGTTAAAAATAACTTAAAAAAAAGTTAAAAAATCAAAAGTAGGTCTCCCCTGGTTTTTATTTTGACTTAAAAGTCATTCAAGTTTGACTTTTTATTTTTTGACTTGAAACGAGATCTAGGTCCGAATAAATATAACATTTTTCTCTCAAAACATCTTTAATTGATCCCAAAATTCCCTTGAATTTTATGTTCTCTTCCAATTGTCTAGTATATTTGTTATGAGTACTTCAAATGCCGCTTCCCAGTAGCCTTTTGAGGCAGTTTAGCTCAGATTTGAACATGTATAAAAAATCGTCATATCACACTTGTATTTGATATTATATCTTCTGTTTTTCGACAAAGGATATATATATCTCCAGTTTCAATTTGTGGATAACTGTACCTCCTATTGGTTGAACAGGTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAGGTGATTCAATTGAACTTTTTGTCCTAATTTCTTTCCTTAGAAGTAGTAAAAAGAGTATCAACCTTCATTAACTACCAAAATTTTTTGTGATCTCAAATATGCATGACCTAGTACTGATAGTTTTGATGTTGATGTCATTCCAGTTGTGATCACTTAAAAGTGGTGATTAGGAGATATTTTATCTGTGGAATGTATTATATATTACAGGACCAGAGTCCTCGCAATTTAAAGGCTTATAAAATTCGAAGTGTTGAAGTAAAGATAGAAAACAATGTGTATACTATCAGGGATCTTGATGATAGCGTTGTCAATCACATGCTCTTTTGAAGAATATAAAAACACTGTTACCTTACTTTGTCTTGGATAATATGCAGACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGATGTAAGGAGCTGTTATTTCATTTCTTACAGTGTTTGTCATGTGCATTTGTGACTTTTGGGTGATTGCATGAAACAGGTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTA--TTTCAGCGTAACACAGCTTATTAAAA-GCCGAGTTACCGAAAATA</genome_strand>
        <mrna_strand>GTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTTTGACATGTCCTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTAGTGGGCTATAGAAGTGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGTTTAGAACATCGTGGAGTACTCTTTGTGGCACCTGCAATGGAG......................................................................................................................................................................................................................................................................................................................................................................................ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGAT...........................................................................GTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGACTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTTAATGTTCCTCATTTATACACACATCTTTACACTTAT-ATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGAAATGTATTTTTCAGCGTAACCCAGAAGGGTAAAACGCAGAGTTACCGAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230566" ref_strand="+" ref_description="SGN-E230566 [cLEL-35-M16](-)">
      <seq>acctgcaatgagacatatgatggcatgattattggagaacattcctgggatacagatcttgatgtcaatccggttaaggcaaaagaactcancaaaataaggtgcgctagcaaggatgagaacgtcnaagtaactcctncaccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagccattaggctaagaaagagatacttggaagtgaacaagagaaaatcaatgagcaagaggcccaaggattgaagcatttttctcacatttgtataaatgaaatttaatttatcttcacctctacttaaatgttcctcatttatacacacatctttacacttataatagatagggaaaaattgtataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="45997" stop="47505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46303" g_stop="46353" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="63" r_length="51" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46354" i_stop="46428" i_length="75">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46429" g_stop="46512" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="148" r_length="85" r_score="0.905"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="0.88"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="199" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46999" g_stop="47202" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="403" r_length="204" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="404" polyA_stop="415"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E230566" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46303" e_stop="46353"/>
          <exon e_start="46429" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGATGTAAGGAGCTGTTATTTCATTTCTTACAGTGTTTGTCATGTGCATTTGTGACTTTTGGGTGATTGCATGAAACAGGTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCC-CCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAA</genome_strand>
        <mrna_strand>ACATATGATGGCATGATTATTGGAGAACATTCCTGGGATACAGATCTTGAT...........................................................................GTCAATCCGGTTAAGGCAAAAGAACTCANCAAAATAAGGTGCGCTAGCAAGGATGAGAACGTCNAAGTAACTCCTNCACCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230784" ref_strand="+" ref_description="SGN-E230784 [cLEL-35-M16](-)">
      <seq>aatataaggtgcgctagcaaggatgagaacgtcaagttaactcctccccgccttatgtccctcgaagaagccataggatatgttgcttccgatgagcttattgaggttacaccaaaagccattaggctaagaaagagatacttggaagtgaacaagagaaaatcaatgagcaagaggcccaaggattgaagcatttttctcacatttgtataaatgaaatttaatttatcttcacctctacttaaatgttcctcatttatacacacatctttacacttataatagatagggaaaaattgtataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="46159" stop="47505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46459" g_stop="46512" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46513" i_stop="46769" i_length="257">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46770" g_stop="46820" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="105" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46821" i_stop="46998" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46999" g_stop="47202" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="309" r_length="204" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="310" polyA_stop="321"/>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E230784" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46459" e_stop="46512"/>
          <exon e_start="46770" e_stop="46820"/>
          <exon e_start="46999" e_stop="47202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTTGTGAGTTTCTACTTTGCTTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTTGCGCTGTTACTTTAACCTTCCTCAGGAAAACAATACTTGTACTTTATCAATACTTGTACTTTATCATATTTCCTAATGTTAAGCGTTCAACGAAGTATGAGAAATTTAGAACTTCACTAGATTGTCGATCTTCAAAAATCTCTTAGCTAAAGGATTTTATAGTATTTAAGCTTTGCTCCTGACGTTCGATGGTTTTTTTGCAGATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAGGTATCCTTATTATTTGGATAATGACTTCGCCATTACACATAACACTTTCTATAATACTTCTTTCGAATAATTTGTTGTTTCTCTACATTAGTGTAAATTGGTGATTATAATGGGAAAAAAAACTAATTTGGTATTACTTTTCGTTAAACCAATGAAATAAACCTATGCTAATGTGCAGGTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAA</genome_strand>
        <mrna_strand>AATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT.................................................................................................................................................................................................................................................................ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG..................................................................................................................................................................................GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324609" ref_strand="+" ref_description="SGN-E324609 [cTOC-9-I5]">
      <seq>tcagatctcactttgtgccctccacatctgagaaaatgggggcatacagagccgacgacgattacgattacttgttcaaggtggtgttgattggtgattccggtgtcggaaagtctaatcttctttctagattcagtcgtaatgagttcagccttgagtctaagtctactatcggtgttgagttcgctactcgaagcattcatgtggaggataaggttgttaaagctcagatttgggatactgctggtcaggaacgatatcgagcaatcacgagtgcttactatcgaggagctgttggtgcattgctggtttatgatgtcactcgtcatgtgacttttgagaatgtggagagatggttgaaggagctcatagatcatactgactcaaacattgtcataatgcttgtgggaaataaggcagatttgcgtcacttacgagctgtttccactgaggatgccaaggcatttgctgagaaggaaagtacatttttcatggaaacatctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="48034" stop="50744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48334" g_stop="48589" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48590" i_stop="50195" i_length="1606">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.781" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50196" g_stop="50444" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="505" r_length="249" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E324609" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48334" e_stop="48589"/>
          <exon e_start="50196" e_stop="50444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGATCTCACTTTGTGCCCTCCACATCTGAGAAAATGGGGGCATACAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACGGTATATATCCTACTCTTTTTACTGCTCATTGGAAAATTTAAATATGAGATCTACTCTGCTGCTTTCTACTTGTGGATGGATGATTATCATTTTCTGCTAAGTTAGATCAGAGTGCTATGTGTAAGATCGTTCCGTTTGAAGTATTGAAGGAGGTAGATCCAGTAATTTAGTTAGTTTCTCTGTGCTTATTTCATGCTAAATTGGTACAAATTTGTGTTTTTTTTCTTCTTCTTTTTGAATATACAAAGATGATTCAAAGGCAAATGCATATGAATATGCTGGCTATTTCATACTTGTGGCTGCTGTGGGTATTAGCGTGGTTGATTTTGCCTTTGGTAGCTACATTTGAGTTGGTTTTTGTGAGCTGAATTGTAATTAGTGGAGGGTTAAACTGATAATGAATGGTCTGATGATGACATGAGAATAGTAAAGTTCGAAACTTTTAGTCTTGATATGTAAGTGCTCCTGATTTTTAGACGAGCTCAACAACTTATCCATCTCATATATTTACTAGTTTAATAGGGACCTAAACAAATTATGATCTGTGAAACATCTTGCACTAGTGTTAGAGCACCTCTACCACCAGCTAAGTAGGAATACAGTTGATCCTCTCAGGGTGTGGATAAGAAATTGTGTTGACTTGTGTATGGTATAATTAGATTGTGATATAGGAATTTTTAATCGAAATGGTGTGTGTTGAGTGACAAATCCAGTAAATGGGTCTGTCAGAATTTTCAACACCAAAATGGTGAGAACACATTGGCTATGGAGCATCTTTGACATCCAATAACAGATGGTTCGTGAAGTGTGTTTACACGGAAGGTGCCCTATGAGCGATGAGTCTTCAGTTTATGTCCAAAATATGGGAAAGGGTCATCATCCATTGTAACACATCTTCAGTGAATATTTTAAAATCTCTAGAATATGAAAAATGTGCTTTCTTTGCACTTATTTGATCTGAGATAGTCGGCTTTTACAGACTTGAAGGGTCATGGACAGTGTGAAACTTTCAGGGAAATTGCAAGGTGTCTTGTGCTTATAGAGCAGTAATAACAACATACTCCGTGTAATCCCACAAATTGGAGGGTAGCCTTTTCCATAAATATTAAAACTCCATTTCTTTCCTATTTTCACTAAGAGATCTAAGATCCCCCTTTCATTTCCACCATTGTAATAAATTTATTCCTGATATAGCTGATCACAAAATAAAAAATAATAGGCGAGGTGATTCTATGCCGTGGCCTAGCCTACTTAGACAGAACCACGTGGTGGGTCTGCAGGAACGAGCCACCAGATAAATACACTTCTCCTCGTTCACCCTCCCCTCCTCCACCTCTAGAAGGGCCTAAATGGTGAATCCTCCGACACAAAGAAGCTGGAGTTTTATTAATTAATTTTTTAAATGTATTAGATGAATGATCTTCATAGTATATGATCTTTTTTTCTCTTACCTAGGATTCTCAAAGTATAGGATAATTTTGTACGTATTTATATTTCAGTAATTAAGTTATTATCTTTCCATATATTTGTTGGTGTTTTTATTTTTTTTCATCAATAATAATGATCAATACAATTGAAATTCGGGGAATGTGCTCTTTTCTTGAAGATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGATGTCACTCGTCATGTGACTTTTGAGAATGTGGAGAGATGGTTGAAGGAGCTCAGAGATCATACTGACTCAAACATTGTCATAATGCTTGTGGGAAATAAGGCAGATTTGCGTCACTTACGAGCTGTTTCCACTGAGGATGCCAAGGCATTTGCTGAGAAGGAAAGTACATTTTTCATGGAAACATCTGC</genome_strand>
        <mrna_strand>TCAGATCTCACTTTGTGCCCTCCACATCTGAGAAAATGGGGGCATACAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGATGTCACTCGTCATGTGACTTTTGAGAATGTGGAGAGATGGTTGAAGGAGCTCATAGATCATACTGACTCAAACATTGTCATAATGCTTGTGGGAAATAAGGCAGATTTGCGTCACTTACGAGCTGTTTCCACTGAGGATGCCAAGGCATTTGCTGAGAAGGAAAGTACATTTTTCATGGAAACATCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339452" ref_strand="+" ref_description="SGN-E339452 [cTOF-4-B10]">
      <seq>acactctgagaaaatgggggcactacaagagccgacgacgattacgattacttgttcaaggtggtgttgattggtgattccggtgtcggaaagtctaatcttctttctagattcagtcgtaatgagttcagccttgagtctaagtctactatcggtgttgagttcgctactcgaagcattcatgtggaggataaggttgttaaagctcagatttgggatactgctggtcaggaacgatatcgagcaatcacgagtgcttactatcgaggagctgttggtgcattgctggtttatgatgtcactcgtcatgtgacttttgagaatgtggagagatggttgaaggagctcagagatcatactgactcaaacattgtcataatgcttgtgggaaataaggcagatttgcgtcacttacgagctgtttccactgaggatgccaaggcatttgctgagaaggaaagtacatttttcatggaaacatctgctctggaatccatgaatgtggaaaacgccttcacagaagtgctcacacaaatataccgtgtcgtgagcaagaaagctcttgaagcaggagatgacccagcagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="48057" stop="50809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48355" g_stop="48589" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48590" i_stop="50195" i_length="1606">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.781" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50196" g_stop="50510" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="551" r_length="315" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E339452" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48355" e_stop="48589"/>
          <exon e_start="50196" e_stop="50510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACATCTGAGAAAATGGGGGCA-TAC-AGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACGGTATATATCCTACTCTTTTTACTGCTCATTGGAAAATTTAAATATGAGATCTACTCTGCTGCTTTCTACTTGTGGATGGATGATTATCATTTTCTGCTAAGTTAGATCAGAGTGCTATGTGTAAGATCGTTCCGTTTGAAGTATTGAAGGAGGTAGATCCAGTAATTTAGTTAGTTTCTCTGTGCTTATTTCATGCTAAATTGGTACAAATTTGTGTTTTTTTTCTTCTTCTTTTTGAATATACAAAGATGATTCAAAGGCAAATGCATATGAATATGCTGGCTATTTCATACTTGTGGCTGCTGTGGGTATTAGCGTGGTTGATTTTGCCTTTGGTAGCTACATTTGAGTTGGTTTTTGTGAGCTGAATTGTAATTAGTGGAGGGTTAAACTGATAATGAATGGTCTGATGATGACATGAGAATAGTAAAGTTCGAAACTTTTAGTCTTGATATGTAAGTGCTCCTGATTTTTAGACGAGCTCAACAACTTATCCATCTCATATATTTACTAGTTTAATAGGGACCTAAACAAATTATGATCTGTGAAACATCTTGCACTAGTGTTAGAGCACCTCTACCACCAGCTAAGTAGGAATACAGTTGATCCTCTCAGGGTGTGGATAAGAAATTGTGTTGACTTGTGTATGGTATAATTAGATTGTGATATAGGAATTTTTAATCGAAATGGTGTGTGTTGAGTGACAAATCCAGTAAATGGGTCTGTCAGAATTTTCAACACCAAAATGGTGAGAACACATTGGCTATGGAGCATCTTTGACATCCAATAACAGATGGTTCGTGAAGTGTGTTTACACGGAAGGTGCCCTATGAGCGATGAGTCTTCAGTTTATGTCCAAAATATGGGAAAGGGTCATCATCCATTGTAACACATCTTCAGTGAATATTTTAAAATCTCTAGAATATGAAAAATGTGCTTTCTTTGCACTTATTTGATCTGAGATAGTCGGCTTTTACAGACTTGAAGGGTCATGGACAGTGTGAAACTTTCAGGGAAATTGCAAGGTGTCTTGTGCTTATAGAGCAGTAATAACAACATACTCCGTGTAATCCCACAAATTGGAGGGTAGCCTTTTCCATAAATATTAAAACTCCATTTCTTTCCTATTTTCACTAAGAGATCTAAGATCCCCCTTTCATTTCCACCATTGTAATAAATTTATTCCTGATATAGCTGATCACAAAATAAAAAATAATAGGCGAGGTGATTCTATGCCGTGGCCTAGCCTACTTAGACAGAACCACGTGGTGGGTCTGCAGGAACGAGCCACCAGATAAATACACTTCTCCTCGTTCACCCTCCCCTCCTCCACCTCTAGAAGGGCCTAAATGGTGAATCCTCCGACACAAAGAAGCTGGAGTTTTATTAATTAATTTTTTAAATGTATTAGATGAATGATCTTCATAGTATATGATCTTTTTTTCTCTTACCTAGGATTCTCAAAGTATAGGATAATTTTGTACGTATTTATATTTCAGTAATTAAGTTATTATCTTTCCATATATTTGTTGGTGTTTTTATTTTTTTTCATCAATAATAATGATCAATACAATTGAAATTCGGGGAATGTGCTCTTTTCTTGAAGATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGATGTCACTCGTCATGTGACTTTTGAGAATGTGGAGAGATGGTTGAAGGAGCTCAGAGATCATACTGACTCAAACATTGTCATAATGCTTGTGGGAAATAAGGCAGATTTGCGTCACTTACGAGCTGTTTCCACTGAGGATGCCAAGGCATTTGCTGAGAAGGAAAGTACATTTTTCATGGAAACATCTGCTCTGGAATCCATGAATGTGGAAAACGCCTTCACAGAAGTGCTCACACAAATATACCGTGTCGTGAA</genome_strand>
        <mrna_strand>ACAC-TCTGAGAAAATGGGGGCACTACAAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGATGTCACTCGTCATGTGACTTTTGAGAATGTGGAGAGATGGTTGAAGGAGCTCAGAGATCATACTGACTCAAACATTGTCATAATGCTTGTGGGAAATAAGGCAGATTTGCGTCACTTACGAGCTGTTTCCACTGAGGATGCCAAGGCATTTGCTGAGAAGGAAAGTACATTTTTCATGGAAACATCTGCTCTGGAATCCATGAATGTGGAAAACGCCTTCACAGAAGTGCTCACACAAATATACCGTGTCGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318430" ref_strand="+" ref_description="SGN-E318430 [cTOB-10-G10]">
      <seq>aaaatgggggcatacagagccgacgacgattacgattacttgttcaaggtggtgttgattggtgattccggtgtccgaaagtctaatcttctttctagattcagtcgtaatgagttcagccttgagtctaagtctactatcggtgttgagttctctactcgaagcattcatgtggaggataaggttgttaaaactcacatttgggatactgctggtcaggaacgatatcgagcaatcacgagtgcttactatcgaggagctgatggtgcattgctggtttatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="48066" stop="50555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48366" g_stop="48589" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48590" i_stop="50195" i_length="1606">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.781" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50196" g_stop="50255" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="284" r_length="60" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E318430" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48366" e_stop="48589"/>
          <exon e_start="50196" e_stop="50255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGGGGCATACAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACGGTATATATCCTACTCTTTTTACTGCTCATTGGAAAATTTAAATATGAGATCTACTCTGCTGCTTTCTACTTGTGGATGGATGATTATCATTTTCTGCTAAGTTAGATCAGAGTGCTATGTGTAAGATCGTTCCGTTTGAAGTATTGAAGGAGGTAGATCCAGTAATTTAGTTAGTTTCTCTGTGCTTATTTCATGCTAAATTGGTACAAATTTGTGTTTTTTTTCTTCTTCTTTTTGAATATACAAAGATGATTCAAAGGCAAATGCATATGAATATGCTGGCTATTTCATACTTGTGGCTGCTGTGGGTATTAGCGTGGTTGATTTTGCCTTTGGTAGCTACATTTGAGTTGGTTTTTGTGAGCTGAATTGTAATTAGTGGAGGGTTAAACTGATAATGAATGGTCTGATGATGACATGAGAATAGTAAAGTTCGAAACTTTTAGTCTTGATATGTAAGTGCTCCTGATTTTTAGACGAGCTCAACAACTTATCCATCTCATATATTTACTAGTTTAATAGGGACCTAAACAAATTATGATCTGTGAAACATCTTGCACTAGTGTTAGAGCACCTCTACCACCAGCTAAGTAGGAATACAGTTGATCCTCTCAGGGTGTGGATAAGAAATTGTGTTGACTTGTGTATGGTATAATTAGATTGTGATATAGGAATTTTTAATCGAAATGGTGTGTGTTGAGTGACAAATCCAGTAAATGGGTCTGTCAGAATTTTCAACACCAAAATGGTGAGAACACATTGGCTATGGAGCATCTTTGACATCCAATAACAGATGGTTCGTGAAGTGTGTTTACACGGAAGGTGCCCTATGAGCGATGAGTCTTCAGTTTATGTCCAAAATATGGGAAAGGGTCATCATCCATTGTAACACATCTTCAGTGAATATTTTAAAATCTCTAGAATATGAAAAATGTGCTTTCTTTGCACTTATTTGATCTGAGATAGTCGGCTTTTACAGACTTGAAGGGTCATGGACAGTGTGAAACTTTCAGGGAAATTGCAAGGTGTCTTGTGCTTATAGAGCAGTAATAACAACATACTCCGTGTAATCCCACAAATTGGAGGGTAGCCTTTTCCATAAATATTAAAACTCCATTTCTTTCCTATTTTCACTAAGAGATCTAAGATCCCCCTTTCATTTCCACCATTGTAATAAATTTATTCCTGATATAGCTGATCACAAAATAAAAAATAATAGGCGAGGTGATTCTATGCCGTGGCCTAGCCTACTTAGACAGAACCACGTGGTGGGTCTGCAGGAACGAGCCACCAGATAAATACACTTCTCCTCGTTCACCCTCCCCTCCTCCACCTCTAGAAGGGCCTAAATGGTGAATCCTCCGACACAAAGAAGCTGGAGTTTTATTAATTAATTTTTTAAATGTATTAGATGAATGATCTTCATAGTATATGATCTTTTTTTCTCTTACCTAGGATTCTCAAAGTATAGGATAATTTTGTACGTATTTATATTTCAGTAATTAAGTTATTATCTTTCCATATATTTGTTGGTGTTTTTATTTTTTTTCATCAATAATAATGATCAATACAATTGAAATTCGGGGAATGTGCTCTTTTCTTGAAGATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGA</genome_strand>
        <mrna_strand>AAAATGGGGGCATACAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCCGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCTCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAACTCACATTTGGGATACTGCTGGTCAGGAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGATGGTGCATTGCTGGTTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479033" ref_strand="+" ref_description="SGN-E479033 [cSTD-8-C24]">
      <seq>cgccgtagccgtcgccggtcatcgaccctgaagagataatgaagttcactgactcgccggtgatcgatcttaaagtcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgcgccgtcaccccaaatccctattccgacatccttaactttaagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgaacaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggctcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtatacttggaggagacggtgggtccgttgctgtcggctatggatgctttggtggaagaaaacggtgtcgttttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgatgtcgagaaggttccacacgagcatttacatncagagtacgcctatgaggagactgacgtttatattttcagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55777" stop="57072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56077" g_stop="56772" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="696" r_length="696" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E479033" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56077" e_stop="56772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGTTACCGTCGCCGGTGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGA</genome_strand>
        <mrna_strand>CGCCGTAGCCGTCGCCGGTCATCGACCCTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGATCTTAAAGTCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCGCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTAAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAACAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTATACTTGGAGGAGACGGTGGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGAAGAAAACGGTGTCGTTTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGATGTCGAGAAGGTTCCACACGAGCATTTACATNCAGAGTACGCCTATGAGGAGACTGACGTTTATATTTTCAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428179" ref_strand="+" ref_description="SGN-E428179 [STM-49-H22]">
      <seq>cttcccagccgtcgccggtcatcgaccctgaagagataatgaagttcactgactcgccggtgatcgatcttaaagtcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgcgccgtcaccccaaatccctattccgacatccttaactttaagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgaacaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggctcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtatacttggangagacggtgggtccgttgctgtcggctatggatgctttggtggaagaaacggtgtcgttttgttggggtaccagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55785" stop="56945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56077" g_stop="56645" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E428179" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56077" e_stop="56645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGTTACCGTCGCCGGTGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTG</genome_strand>
        <mrna_strand>CTTCCCAGCCGTCGCCGGTCATCGACCCTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGATCTTAAAGTCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCGCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTAAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAACAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTATACTTGGANGAGACGGTGGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGAAG-AAACGGTGTCGTTTTGTTGGGGTACCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478021" ref_strand="+" ref_description="SGN-E478021 [cSTD-2-B14]">
      <seq>gtcgccggtcatcgaccctgaagagataatgaagttcactgactcgccggtgatcgatcttaaagtcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgcgccgtcaccccaaatccctattccgacatccttaactttaagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgaacaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggctcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtatacttggaggagacggtgggtccgttgctgtcggctatggatgctttggtggaagaaaacggtgtcgttttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgatgtcgagaaggttccacacgagcatttacatccagagtacgcctatgaggagactgacgtttatattttcaggaagaagaagaaactataggacccttcttcaaattttgtaatctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55787" stop="57094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56087" g_stop="56820" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E478021" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56087" e_stop="56820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGCCGGTGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTTAA</genome_strand>
        <mrna_strand>GTCGCCGGTCATCGACCCTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGATCTTAAAGTCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCGCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTAAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAACAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTATACTTGGAGGAGACGGTGGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGAAGAAAACGGTGTCGTTTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGATGTCGAGAAGGTTCCACACGAGCATTTACATCCAGAGTACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGA--CCCTTCTTC-AAATTTTGTAATCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698865" ref_strand="+" ref_description="SGN-E698865 [FA07DD02]">
      <seq>tgatcgaccttgaagagataatgaagttcactgactcgccggtgatcgaccttaaagtcctcgattctcagctagctttccatcaagacaatggatctatgcatgtcggcaccagtgtatggccctgttcactagtccttgtcaagttcggtgaaaggtggcatcctcaaacatgcgccgtgaacccaaatccctatgctgaaatccttaactttcacaacaagcgcggtgtacagctcggagccggctgtggagtagcagcgatggggcttttcttattaggtctaaacaacgtcgttatcaccgatattgctccggttatgccagccctaaagcacaatctgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55795" stop="56741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56095" g_stop="56441" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E698865" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56095" e_stop="56441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAG</genome_strand>
        <mrna_strand>TGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTACAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486219" ref_strand="+" ref_description="SGN-E486219 [cSTE-21-B9]">
      <seq>gttcactgactcgccggtgatcgatcttaaagtcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgctccgtcaccccaaatccctattccgacatccttaactttcagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgagcaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggcgcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtgtacttggaggagacggtgggtccgttgctatcggctatggatgctttggtgggagaaaacggtgtcgatttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgatgtcgagaaggttccacacgagcatgtacatccagagtacgcctatgaggagactgacgtttatattttcaggaagaagaaagaactataggacccctccttcaattttgtaatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55820" stop="57117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56120" g_stop="56818" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="696" r_length="696" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E486219" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56120" e_stop="56818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTT</genome_strand>
        <mrna_strand>GTTCACTGACTCGCCGGTGATCGATCTTAAAGTCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCTCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTCAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAGCAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCGCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTGGGTCCGTTGCTATCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGATTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGATGTCGAGAAGGTTCCACACGAGCATGTACATCCAGAGTACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAAGAACTATAGGA-CCCCTCCTTC--AATTTTGTAATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482241" ref_strand="+" ref_description="SGN-E482241 [cSTD-21-B9]">
      <seq>gttcactgactcgccggtgatcgatcttaaagtcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgctccgtcaccccaaatccctattccgacatccttaactttcagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgagcaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggcgcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtgtacttggaggagacggtgggtccgttgctatcggctatggatgctttggtgggagaaaacggtgtcgttttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55820" stop="57001"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56120" g_stop="56701" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E482241" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56120" e_stop="56701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGT</genome_strand>
        <mrna_strand>GTTCACTGACTCGCCGGTGATCGATCTTAAAGTCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCTCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTCAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAGCAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCGCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTGGGTCCGTTGCTATCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450393" ref_strand="+" ref_description="SGN-E450393 [cSTS-9-A14]">
      <seq>gagagaactagcctcgattctcagcttgctttccatcaagacaatggatccatgcatgtcggcaccagcgtatggccctgttcactagtcctcgtcaagttcgccgaacggtggcatcctcaaacatgcgccgtcaccccaaatccctattccgacatccttaactttaagaacaagcgcggcgtagagctcggagccggctgcggagtagcagccatggggcttttcttattaggtctgaacaacgtcgttatcactgatattgctccggttatgccggccctaaaacacaatcttaagcgaaacaagcctgttttgaagaagagtttgaagacggctcagttgaattggtccaatcaggatcagataaaatccctcggcccgccgtttgatgtcgtcatcgccgccgatgtggtatacttggaggagacggtgggtccgttgctgtcggctatggatgctttggtggaagaaaacggtgtcgttttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagccttgtggagagatgtttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55850" stop="57000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56152" g_stop="56700" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="559" r_length="549" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E450393" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56152" e_stop="56700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACG</genome_strand>
        <mrna_strand>GCCTCGATTCTCAGCTTGCTTTCCATCAAGACAATGGATCCATGCATGTCGGCACCAGCGTATGGCCCTGTTCACTAGTCCTCGTCAAGTTCGCCGAACGGTGGCATCCTCAAACATGCGCCGTCACCCCAAATCCCTATTCCGACATCCTTAACTTTAAGAACAAGCGCGGCGTAGAGCTCGGAGCCGGCTGCGGAGTAGCAGCCATGGGGCTTTTCTTATTAGGTCTGAACAACGTCGTTATCACTGATATTGCTCCGGTTATGCCGGCCCTAAAACACAATCTTAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAATTGGTCCAATCAGGATCAGATAAAATCCCTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTATACTTGGAGGAGACGGTGGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGAAGAAAACGGTGTCGTTTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCCTTGTGGAGAGATGTTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348452" ref_strand="+" ref_description="SGN-E348452 [cTOF-30-K5]">
      <seq>tagctttccatcaagacaatggatctatgcatgtcggcaccagtgtatggccctgttcactagtccttgtcaagttcggtgaaaggtggcatcctcaaacatgcgccgtgaacccaaatccctatgctgaaatccttaactttcacaacaagcgcggtgtagagctcggagccggctgtggagtagcagcgatggggcttttcttattaggtctaaacaacgtcgttatcaccgatattgctccggttatgccagccctaaagcacaatctgaagcgaaacaagcctgttttgaagaagagtttgaagacggctcagttgaactggtccaatcaggatcagataaaatcactcggcccgccgtttgatgtcgtcatcgccgccgatgtggtgtacttggaggagacggttggtccgttgctgtcggctatggatgctttggtgggagaaaacggtgtcgttttgttggggtatcagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgacgtcgaaaaggttccacacgagcatttacatncagaatacgcctatgaggagactgacgtttatattttcaggaagaagaagaactataggaccccctccttcgaaattttgtaatctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="55867" stop="57119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56167" g_stop="56819" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E348452" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56167" e_stop="56819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTTA</genome_strand>
        <mrna_strand>TAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATNCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAG-AACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428180" ref_strand="-" ref_description="SGN-E428180 [STM-49-H22]">
      <seq>atgtggtatacttggaggagacggtgggtccgttgctgtcggctatggatgctttggtggaagaaaacggtgtcgttttgttggggtaccagctgagatctcctgaggcgcatgagaagttctgggagctttgtggagagatgtttgatgtcgagaaggttccacacgagcatttacatccagagtacgcctatgaggagactgacgtttatattttcaggaagaagaagaaactataggaccctccttcaaattttgtaatctaaacagggtctgaggagaacaataatgtttgttggaggatttaagcttttagtcgataaataagcaaatgaagtgtcagcttcaactttcaagtcaactttttttcctaagaacttctttaccggatggtgttcttggcgcaagagcaatcacgtgtccagcttagaaccccaaaataaactgctgctacttctatgcctcatcccgagatagttgggatcgttgtatgaatccttaatatcataaatgcatgctctgcaactttccattgtaaaccatttgcccctgttaaggattggcggcagagttcttggacggaatacaattagatttcttacattgatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="+" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="56251" stop="57708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56551" g_stop="56823" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56824" i_stop="57097" i_length="274">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57098" g_stop="57414" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="582" r_length="312" r_score="0.864"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="+" ref_id="SGN-E428180" ref_strand="-">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428180" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="56551" e_stop="56823"/>
          <exon e_start="57098" e_stop="57414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTTAACAGGTGATTATTGACAAGCTCGACTTTTTTTGTGTGTGTTATTTTTCGTATTCTGCATTGGCGTGAAATCTTTTGTGTTAATTAAGATGTTTAGTGATGTTGAAATCGTTGAGTATTGCGATGAAACGGTTAAGTTGGAGTTGAACTGATAATGAAGATTTATATAGTAGACACCAACTAGCTTGGAATTTGTTGTTGTTGAGGAATCGAACTTCGTACTAGATATGCATACTTCTATTTATACGAAAGAACACTGTTCTCTCTATAAGAGTAATGTACATTGAAGAGAATAATAATATTGGTTGAAGGATTTAAGATTTTAGTCGATAAATAAGAAAATGAAGTGTCAGCTTCAACTTTCAAGTCTCAGCTATTTTTCCTAAGAACTCCTTTACCGGATGGTGTTCTTGGTGCAAGAGCAATCACTTGTCCAGCTTAAACCCCTCGAAATAAACTGCTACTACTATTATACCTCGACCCCGAGCTAGTTGGGTTCAATTGTATGAATACTTTATGTCATAAATGCAACCTCTGCAATTTTCCATTGTAAACGATTTGCCCCTGTTAAGGATTGGCGGCAGAGTTCTTTCCCTG</genome_strand>
        <mrna_strand>ATGTGGTATACTTGGAGGAGACGGTGGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGAAGAAAACGGTGTCGTTTTGTTGGGGTACCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGATGTCGAGAAGGTTCCACACGAGCATTTACATCCAGAGTACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGA--CCCTCCTTC-AAATTTTGTAATCTAAACAG..................................................................................................................................................................................................................................................................................GGTCTGAGGAGAACAATAATGTTTGTTGGAGGATTTAAGCTTTTAGTCGATAAATAAGCAAATGAAGTGTCAGCTTCAACTTTCAAG--TCAACTTTTTTTCCTAAGAACTTCTTTACCGGATGGTGTTCTTGGCGCAAGAGCAATCACGTGTCCAGCTTAGAACCC-CAAAATAAACTGCTGCTACTTCTATGCCTC-ATCCCGAGATAGTTGGGATC-GTTGTATGAATCCTTAATATCATAAATGCATGCTCTGCAACTTTCCATTGTAAACCATTTGCCCCTGTTAAGGATTGGCGGCAGAGTTCTTGGACGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E380017" ref_strand="+" ref_description="SGN-E380017 [TUS-1-D13](-)">
      <seq>catcaagatttacgtggaaaccccttcgatgtgaagagtaaaaaaccacgggtccaaaagctccactataatcaccaagagttacaatattgttctccaaaattggccacaaaacaaagtgtcaaacaacgagcaacaacaaaataagattgctccaaatctagagaattaaaggagcaaaatcaccaatttcgcagctactgttcacgacagcaaaactgaagctgcagaccaccaaatccaactctgtcagttcctaatcaaagattgagatgaagataatatgctgtccaaaaatcagctcaatcggacaagaaacgaagcgggaatcgcaatttgaagttggttgttatggctggatttttgactgcgaatttctctcttttttctctcttttagctgctgaaaaactctctctgaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184G23-YX0u9/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0184G23.1" temp_strand="-" temp_description="C07HBa0184G23.1  AC210360.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0184G23 upload_account_name:france">
        <position start="67639" stop="66619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67339" g_stop="66915" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184G23.1" gen_strand="-" ref_id="SGN-E380017" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184G23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E380017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67339" e_stop="66915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAAGATTTACGTGAAAAACTCTTCGATGTGAAGAGTAAAAAAATCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTAAAATATTGTTCTCCAAAATTGGCCACAAAA-AAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTATTCACGACAACAAAACTGAAGCTGCAGGCCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGTAATTTGAAGTTGGCTGTTAGGGCT-GAATTTTGACTGCGAAAATCTGCTCTTTTTCTCTCTTTTTGGCCGCTAAAAAACTCTCTGTGTATTTG</genome_strand>
        <mrna_strand>CATCAAGATTTACGTGGAAACCCCTTCGATGTGAAGAGT-AAAAAACCACGGGTCCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGTCAAACAACGAGCAACAACAAAATAAGATTGCTCCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTC-TTTTAGCTGCTGAAAAACTCTCTCTGAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>82</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1015" PGL_stop="429"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1015" e_stop="429"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="1015" e_stop="429" e_length="587"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1015" stop="429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1015" stop="429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357100" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTCTGTAAGAATAGTGTGGATCAAATCATCAACACGGGGCACACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCATCCATTATTGCTTCTTTAGCCTCTCCTCGCAACACCATATCCCGAATTCGGCTTAGTTTCTCATCATCAAACTGTTTTCCCTTGATCTTGTCAAGAAAAGAAGATCTTGCCTCCACACTGGCCAAAAATCCTCCCTTCTCATTTACTTCTAGCCTCATAAAGTTATTAGCCAGAGTCTGAACTTCTCTAGCCAATGGGCGTCTAGAAACTTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCTTTTCTACTTAAGGCGTCTGCCACAACATTAGCCTTTCCCGGATGATACAAGGTAGTGATATCGTAGTCCTTCAGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTTTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATATACTTCACACTTAACCCCATATAGATAATGTCTCCATTGCTTTAATGCAAACACTACCGCAACCAATTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</gDNA_template>
            <first_frame> P  L  *  E  *  C  G  S  N  H  Q  H  G  A  H  I  P  F  P  *  F  S  K  H  L  P  H  P  L  L  L  L  *  P  L  L  A  T  P  Y  P  E  F  G  L  V  S  H  H  Q  T  V  F  P  *  S  C  Q  E  K  K  I  L  P  P  H  W  P  K  I  L  P  S  H  L  L  L  A  S  *  S  Y  *  P  E  S  E  L  L  *  P  M  G  V  *  K  L  A  S  E  L  D  F  P  C  S  L  L  F  Y  L  R  R  L  P  Q  H  *  P  F  P  D  D  T  R  *  *  Y  R  S  P  S  V  V  P  S  I  S  S  V  S  N  S  N  L  F  E  *  R  H  T  V  G  Y  D  D  P  Y  I  L  H  T  *  P  H  I  D  N  V  S  I  A  L  M  Q  T  L  P  Q  P  I  P  N  H  G  S  D  N  Y  V  H  A  P  L  I   </first_frame>
            <second_frame>  L  C  K  N  S  V  D  Q  I  I  N  T  G  H  T  Y  P  S  L  N  S  Q  N  T  F  L  I  H  Y  C  F  F  S  L  S  S  Q  H  H  I  P  N  S  A  *  F  L  I  I  K  L  F  S  L  D  L  V  K  K  R  R  S  C  L  H  T  G  Q  K  S  S  L  L  I  Y  F  *  P  H  K  V  I  S  Q  S  L  N  F  S  S  Q  W  A  S  R  N  L  Q  V  S  *  T  S  H  A  P  C  F  S  T  *  G  V  C  H  N  I  S  L  S  R  M  I  Q  G  S  D  I  V  V  L  Q  *  F  H  P  S  P  L  S  Q  I  Q  I  F  L  S  K  D  I  L  *  A  T  M  I  R  I  Y  F  T  L  N  P  I  *  I  M  S  P  L  L  *  C  K  H  Y  R  N  Q  F  Q  I  M  G  R  I  I  T  F  M  H  L  *  L  </second_frame>
            <third_frame>   S  V  R  I  V  W  I  K  S  S  T  R  G  T  H  T  L  P  L  I  L  K  T  P  S  S  S  I  I  A  S  L  A  S  P  R  N  T  I  S  R  I  R  L  S  F  S  S  S  N  C  F  P  L  I  L  S  R  K  E  D  L  A  S  T  L  A  K  N  P  P  F  S  F  T  S  S  L  I  K  L  L  A  R  V  *  T  S  L  A  N  G  R  L  E  T  C  K  *  A  R  L  P  M  L  P  A  F  L  L  K  A  S  A  T  T  L  A  F  P  G  *  Y  K  V  V  I  S  *  S  F  S  S  S  I  H  L  L  C  L  K  F  K  S  F  *  V  K  T  Y  C  R  L  R  *  S  V  Y  T  S  H  L  T  P  Y  R  *  C  L  H  C  F  N  A  N  T  T  A  T  N  S  K  S  W  V  G  *  L  R  S  C  T  F  N  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1013" stop="756"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVRIVWIKSSTRGTHTLPLILKTPSSSIIASLASPRNTISRIRLSFSSSNCFPLILSRKEDLASTLAKNPPFSFTSSLIKLLARV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="1675" PGL_stop="1499"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1675" e_stop="1499"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="1675" e_stop="1499" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1675" stop="1499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCGCATACAATGCTTCGAAGGGAGCCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCATTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  A  Y  N  A  S  K  G  A  I  S  I  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  I  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  T  M  L  R  R  E  P  Y  Q  Y  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  M  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  R  I  Q  C  F  E  G  S  H  I  N  T  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  A  T  K  F  Y  H  T  C  T  K  H  I  L  Q  H  L  N  H  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184G23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="8476" PGL_stop="9693"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8476" e_stop="9693"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="8476" e_stop="9693" e_length="1218"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8476" stop="9340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8514" stop="9043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8514" stop="9037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8553" stop="9144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9218" stop="9693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443495" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTCTTCTCGAAAAAAATTCAAAATCGTCTGAATTTGATCCTTCAAAAACCTCGATTTCTTGCTCATTCCCGAAGAAAAACTGTTCCTCTGTATAGATATGTCAAATTCCCCAATTCAAGAACCATCAATCGACGACTCTAACAACGCTGAAGAACCAGACACAGAAAACCCAAATTCAGAGCTTCAATCGCAACCCCAAATCTTAGAACCCCTTAATCCTCAAAACCAAGAGAATCCCATCTCCAGTTTGCGAAAACAAGAGACCCCAGATGTGATTCTTGAAGAAAAAGACCTAGAAAAAGAAAACCCTCAAGTTGTTACGGCTGATGTAAATGCTGATTTTGGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACTGACCTTCGAATGATGTCGCCTAGTAATACTATCAAGCGTACTAAGCGGAAGAAGGGTAAATGCCACACAAAGAAGCTACAAGCTATTGAGAAAAAATTGCAAATGCTTAAGGAAAACCTAAAGCCTGTTCCTTTTTTCCCTTCAAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTGAGGCGTTTGGGGTTGTGGGATTTTGTACATATAGAGTTTGATAGAGATATAAGGGTGGATTTGATTGCACAGTTGATTGCTACTTATGATTCTAAGTTGAGGGCTAGTTATGTTAATGATTTTAGAATTGCGGTTAATAGGGCTGATTTAGGGCGGGCGCTTAAGCTGCCTTTGAAGAAGGACAAAGGGAGTGTTGCTGTGGTTGATGGTATGGAAGTGGATGCTGACCCATTGACTGAGGAGTCGATAAGCTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATGAGGACGCGTGGATAATGCCTAATGAGGTCTTAAGTTGGACTAAGGCTATAAAAGATGGGCACCCTGAGAAAGTGGATTGGGCTGGATTGTTCTGGTTCATGGTGGAGAAGGAACTGACACAAGGGGACCAATTAGTGGACTGTTATTATGCTGCACATTTGCAATACTTGATAAAGTCACAGCGTGAGCAGGTGTTGTATAGTGAAGAACCAGAAAAGGTGGAGTCTGAAGCTGATGTGAAGGAGGAGGAGGATTGTGGTAACGAGGACAATGCAAGAGTCGGTGGGTCAATCGAAGCTCAAGAATTGGATGGAGCTTTAGGGGAGGAACTGAGTATTGAGTTGACGTTGGGT</gDNA_template>
            <first_frame> C  S  S  R  K  K  F  K  I  V  *  I  *  S  F  K  N  L  D  F  L  L  I  P  E  E  K  L  F  L  C  I  D  M  S  N  S  P  I  Q  E  P  S  I  D  D  S  N  N  A  E  E  P  D  T  E  N  P  N  S  E  L  Q  S  Q  P  Q  I  L  E  P  L  N  P  Q  N  Q  E  N  P  I  S  S  L  R  K  Q  E  T  P  D  V  I  L  E  E  K  D  L  E  K  E  N  P  Q  V  V  T  A  D  V  N  A  D  F  G  L  T  V  D  L  P  I  A  D  T  E  V  S  V  T  D  L  R  M  M  S  P  S  N  T  I  K  R  T  K  R  K  K  G  K  C  H  T  K  K  L  Q  A  I  E  K  K  L  Q  M  L  K  E  N  L  K  P  V  P  F  F  P  S  K  I  L  D  F  D  R  H  E  K  L  L  R  R  L  G  L  W  D  F  V  H  I  E  F  D  R  D  I  R  V  D  L  I  A  Q  L  I  A  T  Y  D  S  K  L  R  A  S  Y  V  N  D  F  R  I  A  V  N  R  A  D  L  G  R  A  L  K  L  P  L  K  K  D  K  G  S  V  A  V  V  D  G  M  E  V  D  A  D  P  L  T  E  E  S  I  S  F  L  E  N  F  V  S  I  W  V  L  L  H  E  D  A  W  I  M  P  N  E  V  L  S  W  T  K  A  I  K  D  G  H  P  E  K  V  D  W  A  G  L  F  W  F  M  V  E  K  E  L  T  Q  G  D  Q  L  V  D  C  Y  Y  A  A  H  L  Q  Y  L  I  K  S  Q  R  E  Q  V  L  Y  S  E  E  P  E  K  V  E  S  E  A  D  V  K  E  E  E  D  C  G  N  E  D  N  A  R  V  G  G  S  I  E  A  Q  E  L  D  G  A  L  G  E  E  L  S  I  E  L  T  L  G </first_frame>
            <second_frame>  V  L  L  E  K  N  S  K  S  S  E  F  D  P  S  K  T  S  I  S  C  S  F  P  K  K  N  C  S  S  V  *  I  C  Q  I  P  Q  F  K  N  H  Q  S  T  T  L  T  T  L  K  N  Q  T  Q  K  T  Q  I  Q  S  F  N  R  N  P  K  S  *  N  P  L  I  L  K  T  K  R  I  P  S  P  V  C  E  N  K  R  P  Q  M  *  F  L  K  K  K  T  *  K  K  K  T  L  K  L  L  R  L  M  *  M  L  I  L  V  *  L  W  I  Y  Q  L  Q  I  Q  R  *  V  L  L  T  F  E  *  C  R  L  V  I  L  S  S  V  L  S  G  R  R  V  N  A  T  Q  R  S  Y  K  L  L  R  K  N  C  K  C  L  R  K  T  *  S  L  F  L  F  S  L  Q  R  F  L  I  L  I  G  M  R  S  Y  *  G  V  W  G  C  G  I  L  Y  I  *  S  L  I  E  I  *  G  W  I  *  L  H  S  *  L  L  L  M  I  L  S  *  G  L  V  M  L  M  I  L  E  L  R  L  I  G  L  I  *  G  G  R  L  S  C  L  *  R  R  T  K  G  V  L  L  W  L  M  V  W  K  W  M  L  T  H  *  L  R  S  R  *  A  F  L  R  T  L  C  Q  F  G  C  F  C  M  R  T  R  G  *  C  L  M  R  S  *  V  G  L  R  L  *  K  M  G  T  L  R  K  W  I  G  L  D  C  S  G  S  W  W  R  R  N  *  H  K  G  T  N  *  W  T  V  I  M  L  H  I  C  N  T  *  *  S  H  S  V  S  R  C  C  I  V  K  N  Q  K  R  W  S  L  K  L  M  *  R  R  R  R  I  V  V  T  R  T  M  Q  E  S  V  G  Q  S  K  L  K  N  W  M  E  L  *  G  R  N  *  V  L  S  *  R  W   </second_frame>
            <third_frame>   F  F  S  K  K  I  Q  N  R  L  N  L  I  L  Q  K  P  R  F  L  A  H  S  R  R  K  T  V  P  L  Y  R  Y  V  K  F  P  N  S  R  T  I  N  R  R  L  *  Q  R  *  R  T  R  H  R  K  P  K  F  R  A  S  I  A  T  P  N  L  R  T  P  *  S  S  K  P  R  E  S  H  L  Q  F  A  K  T  R  D  P  R  C  D  S  *  R  K  R  P  R  K  R  K  P  S  S  C  Y  G  *  C  K  C  *  F  W  F  N  C  G  S  T  N  C  R  Y  R  G  K  C  Y  *  P  S  N  D  V  A  *  *  Y  Y  Q  A  Y  *  A  E  E  G  *  M  P  H  K  E  A  T  S  Y  *  E  K  I  A  N  A  *  G  K  P  K  A  C  S  F  F  P  F  K  D  S  *  F  *  *  A  *  E  V  T  E  A  F  G  V  V  G  F  C  T  Y  R  V  *  *  R  Y  K  G  G  F  D  C  T  V  D  C  Y  L  *  F  *  V  E  G  *  L  C  *  *  F  *  N  C  G  *  *  G  *  F  R  A  G  A  *  A  A  F  E  E  G  Q  R  E  C  C  C  G  *  W  Y  G  S  G  C  *  P  I  D  *  G  V  D  K  L  S  *  E  L  C  V  N  L  G  A  F  A  *  G  R  V  D  N  A  *  *  G  L  K  L  D  *  G  Y  K  R  W  A  P  *  E  S  G  L  G  W  I  V  L  V  H  G  G  E  G  T  D  T  R  G  P  I  S  G  L  L  L  C  C  T  F  A  I  L  D  K  V  T  A  *  A  G  V  V  *  *  R  T  R  K  G  G  V  *  S  *  C  E  G  G  G  G  L  W  *  R  G  Q  C  K  S  R  W  V  N  R  S  S  R  I  G  W  S  F  R  G  G  T  E  Y  *  V  D  V  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8515" stop="9693"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1179</number_coding_nucleotides>
                  <number_encoded_amino_acids>393</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFKNLDFLLIPEEKLFLCIDMSNSPIQEPSIDDSNNAEEPDTENPNSELQSQPQILEPLNPQNQENPISSLRKQETPDVILEEKDLEKENPQVVTADVNADFGLTVDLPIADTEVSVTDLRMMSPSNTIKRTKRKKGKCHTKKLQAIEKKLQMLKENLKPVPFFPSKILDFDRHEKLLRRLGLWDFVHIEFDRDIRVDLIAQLIATYDSKLRASYVNDFRIAVNRADLGRALKLPLKKDKGSVAVVDGMEVDADPLTEESISFLENFVSIWVLLHEDAWIMPNEVLSWTKAIKDGHPEKVDWAGLFWFMVEKELTQGDQLVDCYYAAHLQYLIKSQREQVLYSEEPEKVESEADVKEEEDCGNEDNARVGGSIEAQELDGALGEELSIELTLG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="9783" PGL_stop="13087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9783" e_stop="10984"/>
            <exon e_start="12771" e_stop="13087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9783" e_stop="10984" e_length="1202"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.983">
            <gDNA_intron_boundary i_start="10985" i_stop="12770" i_length="1786"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="12771" e_stop="13087" e_length="317"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9783" stop="10124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9796" stop="10344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9825" stop="10513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557679" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9894" stop="10528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247794" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10039" stop="10852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711012" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10146" stop="10817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10146" stop="10467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204748" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10216" stop="10593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10283" stop="10653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10307" stop="10897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10413" stop="10984"/>
              <exon start="12771" stop="13016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692595" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10536" stop="10912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10544" stop="10869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10551" stop="10984"/>
              <exon start="12771" stop="12969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10556" stop="10984"/>
              <exon start="12771" stop="13087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372023" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10576" stop="10983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10592" stop="10984"/>
              <exon start="12771" stop="13079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10692" stop="10984"/>
              <exon start="12771" stop="13079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10739" stop="10984"/>
              <exon start="12771" stop="13036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241794" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10863" stop="10984"/>
              <exon start="12771" stop="13070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAAACAGTGGCTTTTTGATGAAAGAAAAGATGCTAACGAGCCTTTGTTACAGAGATGTAAGATGCAGGAAGCAGTGTCTTTGGATAACGATGAGGAGAAGAAAGAAAACCATGAGTTGGAAGATGAGAATGAGAATGAGAATGACAACGACACGAACAATGACAATGACAATGACAATGATAATGTGAATGATGATGATGTTGAGGAAGAGGATGAAGGAGCAGAGAGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGATGGGATGACAGGAAATTTACTGCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAGGGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTTGCTTCTAGAGATGAGATGCATACAGGTGGCCACTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAACCTGATATGGCTCATCATTCTCTCCATGGCAGCAGCAAGAGGTTGCGAATTGAGGGGGAATGGGACGAGAAGCCATTAGATTTTGGATCATGCATGGAGCAGATGCAGCACCTAATGATGAAGGCTAGGATGATGTATGAAGCGAAGGAACAGAATGAGGATCAATTAAACATAAACCAACAAATTTTTCTTAGTGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAAATACAAAAAAGGGATGCAGATATTTGTCGTCTTGAACGGGAGCTTTTTATGATGGGAAATATATTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTTTCTGAGTATAGGAAGAAATTCCAGCTGCCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATGTTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAATTTCGATCCAATTGCTTGATCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAGAATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATAGGCCTTGAGGATGTAGTGAAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCAGAAATTCCCGACTGCCCTGCAGATGAATGATTTGCTTTGCCAAATCTTCAGTTCCATGGTTGAAAAAATGCAG : GATTTTTTGCAGATGTTTAGCTTACATTCGACATGGTGCTTCTTATATTACTCGCCGGAAGGTGGTGTTATGCAAGCATTTTTGGAGAAGGCTTACTATAGCTCAGGCTGGTTTATCTATGTTTTTGTTTTGTGGCCTTCTTTGTTATATGCTTTAGAAGTTTCAAGTACTTAAAATTCCATTAGGTATTGATGGATGTTAGCTCTAATGTGATTATTATTGCATAGGGATATGACTTTATTTTATGTGTTAGTTTTTGGATTTTACAATAGTACATATACCATGTAATGGTATTGACTAATTCCCCTACTCTTCAA</gDNA_template>
            <first_frame> R  E  T  V  A  F  *  *  K  K  R  C  *  R  A  F  V  T  E  M  *  D  A  G  S  S  V  F  G  *  R  *  G  E  E  R  K  P  *  V  G  R  *  E  *  E  *  E  *  Q  R  H  E  Q  *  Q  *  Q  *  Q  *  *  C  E  *  *  *  C  *  G  R  G  *  R  S  R  E  A  *  G  *  R  *  I  *  C  Y  S  *  *  W  Y  S  C  W  G  W  D  D  R  K  F  T  A  N  D  G  K  Y  T  D  W  I  Y  F  T  G  A  T  S  *  S  V  F  S  *  A  S  C  F  *  R  *  D  A  Y  R  W  P  L  F  W  Q  W  K  *  E  R  D  G  D  *  T  *  Y  G  S  S  F  S  P  W  Q  Q  Q  E  V  A  N  *  G  G  M  G  R  E  A  I  R  F  W  I  M  H  G  A  D  A  A  P  N  D  E  G  *  D  D  V  *  S  E  G  T  E  *  G  S  I  K  H  K  P  T  N  F  S  *  *  S  A  *  K  G  Q  R  N  *  S  L  A  *  V  *  M  *  G  N  T  K  K  G  C  R  Y  L  S  S  *  T  G  A  F  Y  D  G  K  Y  I  G  W  L  Q  E  G  I  E  G  N  P  E  T  V  F  *  V  *  E  E  I  P  A  A  *  R  T  I  L  Q  R  C  W  S  W  R  S  N  V  E  L  C  *  N  G  K  A  T  P  Q  A  R  G  R  I  S  I  Q  L  L  D  L  G  T  K  S  K  R  S  R  G  R  I  C  W  S  V  *  E  F  Y  G  *  G  S  D  A  G  *  E  V  D  R  P  *  G  C  S  E  G  P  Q  K  H  E  S  K  K  *  S  S  R  K  *  G  *  N  F  R  N  S  R  L  P  C  R  *  M  I  C  F  A  K  S  S  V  P  W  L  K  K  C  R :   I  F  C  R  C  L  A  Y  I  R  H  G  A  S  Y  I  T  R  R  K  V  V  L  C  K  H  F  W  R  R  L  T  I  A  Q  A  G  L  S  M  F  L  F  C  G  L  L  C  Y  M  L  *  K  F  Q  V  L  K  I  P  L  G  I  D  G  C  *  L  *  C  D  Y  Y  C  I  G  I  *  L  Y  F  M  C  *  F  L  D  F  T  I  V  H  I  P  C  N  G  I  D  *  F  P  Y  S  S  </first_frame>
            <second_frame>  E  K  Q  W  L  F  D  E  R  K  D  A  N  E  P  L  L  Q  R  C  K  M  Q  E  A  V  S  L  D  N  D  E  E  K  K  E  N  H  E  L  E  D  E  N  E  N  E  N  D  N  D  T  N  N  D  N  D  N  D  N  D  N  V  N  D  D  D  V  E  E  E  D  E  G  A  E  R  H  E  V  E  D  E  F  D  V  I  P  S  N  G  T  L  V  G  D  G  M  T  G  N  L  L  Q  T  M  E  S  T  Q  I  G  F  T  S  Q  G  Q  L  H  D  Q  S  S  V  E  L  L  A  S  R  D  E  M  H  T  G  G  H  F  F  G  S  G  S  K  R  E  M  E  I  E  P  D  M  A  H  H  S  L  H  G  S  S  K  R  L  R  I  E  G  E  W  D  E  K  P  L  D  F  G  S  C  M  E  Q  M  Q  H  L  M  M  K  A  R  M  M  Y  E  A  K  E  Q  N  E  D  Q  L  N  I  N  Q  Q  I  F  L  S  E  V  H  K  R  D  S  V  I  D  H  L  H  K  S  K  C  E  E  I  Q  K  R  D  A  D  I  C  R  L  E  R  E  L  F  M  M  G  N  I  L  D  G  Y  R  K  A  L  K  E  T  Q  K  Q  F  S  E  Y  R  K  K  F  Q  L  P  E  E  P  Y  Y  K  D  A  G  P  G  G  L  M  L  S  S  A  E  M  E  K  L  R  L  K  Q  E  E  E  F  R  S  N  C  L  I  L  E  Q  K  A  K  E  A  E  E  E  Y  A  G  Q  F  E  N  F  M  G  K  V  Q  M  L  D  K  R  L  I  G  L  E  D  V  V  K  D  L  R  N  M  S  P  K  S  K  V  P  E  S  E  D  K  I  S  E  I  P  D  C  P  A  D  E  *  F  A  L  P  N  L  Q  F  H  G  *  K  N  A   : G  F  F  A  D  V  *  L  T  F  D  M  V  L  L  I  L  L  A  G  R  W  C  Y  A  S  I  F  G  E  G  L  L  *  L  R  L  V  Y  L  C  F  C  F  V  A  F  F  V  I  C  F  R  S  F  K  Y  L  K  F  H  *  V  L  M  D  V  S  S  N  V  I  I  I  A  *  G  Y  D  F  I  L  C  V  S  F  W  I  L  Q  *  Y  I  Y  H  V  M  V  L  T  N  S  P  T  L  Q </second_frame>
            <third_frame>   R  N  S  G  F  L  M  K  E  K  M  L  T  S  L  C  Y  R  D  V  R  C  R  K  Q  C  L  W  I  T  M  R  R  R  K  K  T  M  S  W  K  M  R  M  R  M  R  M  T  T  T  R  T  M  T  M  T  M  T  M  I  M  *  M  M  M  M  L  R  K  R  M  K  E  Q  R  G  M  R  L  K  M  N  L  M  L  F  L  V  M  V  L  L  L  G  M  G  *  Q  E  I  Y  C  K  R  W  K  V  H  R  L  D  L  L  H  R  G  N  F  M  I  S  L  Q  L  S  F  L  L  L  E  M  R  C  I  Q  V  A  T  F  L  A  V  E  V  R  E  R  W  R  L  N  L  I  W  L  I  I  L  S  M  A  A  A  R  G  C  E  L  R  G  N  G  T  R  S  H  *  I  L  D  H  A  W  S  R  C  S  T  *  *  *  R  L  G  *  C  M  K  R  R  N  R  M  R  I  N  *  T  *  T  N  K  F  F  L  V  K  C  I  K  G  T  A  *  L  I  T  C  I  S  L  N  V  R  K  Y  K  K  G  M  Q  I  F  V  V  L  N  G  S  F  L  *  W  E  I  Y  W  M  V  T  G  R  H  *  R  K  P  R  N  S  F  L  S  I  G  R  N  S  S  C  L  K  N  H  T  T  K  M  L  V  L  E  V  *  C  *  A  L  L  K  W  K  S  Y  A  S  S  K  R  K  N  F  D  P  I  A  *  S  W  N  K  K  Q  K  K  Q  R  K  N  M  L  V  S  L  R  I  L  W  V  R  F  R  C  W  I  R  G  *  *  A  L  R  M  *  *  R  T  S  E  T  *  V  Q  K  V  K  F  Q  K  V  R  I  K  F  Q  K  F  P  T  A  L  Q  M  N  D  L  L  C  Q  I  F  S  S  M  V  E  K  M  Q  :  D  F  L  Q  M  F  S  L  H  S  T  W  C  F  L  Y  Y  S  P  E  G  G  V  M  Q  A  F  L  E  K  A  Y  Y  S  S  G  W  F  I  Y  V  F  V  L  W  P  S  L  L  Y  A  L  E  V  S  S  T  *  N  S  I  R  Y  *  W  M  L  A  L  M  *  L  L  L  H  R  D  M  T  L  F  Y  V  L  V  F  G  F  Y  N  S  T  Y  T  M  *  W  Y  *  L  I  P  L  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9784" stop="10941"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKQWLFDERKDANEPLLQRCKMQEAVSLDNDEEKKENHELEDENENENDNDTNNDNDNDNDNVNDDDVEEEDEGAERHEVEDEFDVIPSNGTLVGDGMTGNLLQTMESTQIGFTSQGQLHDQSSVELLASRDEMHTGGHFFGSGSKREMEIEPDMAHHSLHGSSKRLRIEGEWDEKPLDFGSCMEQMQHLMMKARMMYEAKEQNEDQLNINQQIFLSEVHKRDSVIDHLHKSKCEEIQKRDADICRLERELFMMGNILDGYRKALKETQKQFSEYRKKFQLPEEPYYKDAGPGGLMLSSAEMEKLRLKQEEEFRSNCLILEQKAKEAEEEYAGQFENFMGKVQMLDKRLIGLEDVVKDLRNMSPKSKVPESEDKISEIPDCPADE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10938" stop="10984"/>
                    <exon start="12771" stop="12927"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MICFAKSSVPWLKKCRIFCRCLAYIRHGASYITRRKVVLCKHFWRRLTIAQAGLSMFLFCGLLCYML*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="17751" PGL_stop="12761"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17428" e_stop="17366"/>
            <exon e_start="16830" e_stop="16740"/>
            <exon e_start="16642" e_stop="16516"/>
            <exon e_start="16094" e_stop="15916"/>
            <exon e_start="14846" e_stop="14367"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.954" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17428" e_stop="17366" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17365" i_stop="16831" i_length="535"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16830" e_stop="16740" e_length="91"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16739" i_stop="16643" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16642" e_stop="16516" e_length="127"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="16094" e_stop="15916" e_length="179"/>
          </exon>
          <intron i_serial="4" don_prob="0.876" acc_prob="0.954">
            <gDNA_intron_boundary i_start="15915" i_stop="14847" i_length="1069"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="14846" e_stop="14367" e_length="480"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17428" stop="17366"/>
              <exon start="16830" stop="16740"/>
              <exon start="16642" stop="16516"/>
              <exon start="16094" stop="15916"/>
              <exon start="14846" stop="14714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17424" stop="17366"/>
              <exon start="16830" stop="16740"/>
              <exon start="16642" stop="16516"/>
              <exon start="16094" stop="15916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16638" stop="16516"/>
              <exon start="16094" stop="15916"/>
              <exon start="14846" stop="14367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAG : GATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAA : GCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATG : CTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAG : GATAAAAAGAATGTAGCTTGAGGAGAAGCACTAAGCAGATTCATGTGGTATTTGGACCTACCAAGAAAGTTTCTTATTATGGAGGGGACAAAGATAAGGTCACTTGAATTCTTGCATTGATCACTCAATTTCTAGGGGTCCATATAAACAGTTTAAATTGTTTTTTTTTTTCTTAGGGATGGGTGTCTTATTATTTTTATTTTTCAATAATTAATTTTCTCTATTTTTTTAATTAAAAAAAATATTTCTATGAACTACTTTCAAAAATTTTTATTGTTGGAAGGGGGCATGTGGAGTTCTTTGTATTGAAGATTGTGACTTGTCAGTTAGCTGTTTGATGTCAGGGTTATGGCACTTTTTTTTTAATCAGTGTCTTTTCTTGTGAGTGGTTGTTATTTTTTTTTTATCTTGTATTATTTTTTGTAAATGTAAATATTTCTTTCATTTTATTATTGTATTTGAAATCTGAGTTTCGAATTA</gDNA_template>
            <first_frame> *  S  *  *  S  C  *  *  F  *  R  K  N  H  R  S  K  E  N  *  K  :  D  F  G  K  *  T  I  S  T  K  V  K  G  E  K  I  T  V  H  I  G  A  R  T  *  R  Y  Y  T  S   : S  *  S  F  S  I  I  T  K  S  C  I  F  G  P  S  T  F  G  S  K  C  *  *  *  C  S  *  A  K  N  C  S  S  C  P  R  *  N  I  *  R  C :   S  S  R  S  I  E  E  R  N  R  E  V  K  G  N  I  L  P  T  E  L  K  E  D  G  K  *  *  *  *  *  *  S  F  N  K  D  T  T  R  C  *  W  L  *  E  E  R  T  A  C  Q  L  I  I  F  S  A  I   : G  *  K  E  C  S  L  R  R  S  T  K  Q  I  H  V  V  F  G  P  T  K  K  V  S  Y  Y  G  G  D  K  D  K  V  T  *  I  L  A  L  I  T  Q  F  L  G  V  H  I  N  S  L  N  C  F  F  F  S  *  G  W  V  S  Y  Y  F  Y  F  S  I  I  N  F  L  Y  F  F  N  *  K  K  Y  F  Y  E  L  L  S  K  I  F  I  V  G  R  G  H  V  E  F  F  V  L  K  I  V  T  C  Q  L  A  V  *  C  Q  G  Y  G  T  F  F  L  I  S  V  F  S  C  E  W  L  L  F  F  F  Y  L  V  L  F  F  V  N  V  N  I  S  F  I  L  L  L  Y  L  K  S  E  F  R  I  </first_frame>
            <second_frame>  D  H  D  D  H  V  D  N  S  S  E  K  I  I  D  P  K  R  I  K  R :   I  L  A  N  R  Q  S  A  Q  R  S  R  V  R  K  L  Q  Y  I  S  E  L  E  R  S  V  T  T  L  Q  :  A  E  V  S  V  L  S  P  R  V  A  F  L  D  H  Q  R  L  V  L  N  V  D  N  S  V  L  K  Q  R  I  A  A  L  A  Q  D  K  I  F  K  D   : A  H  Q  E  A  L  K  R  E  I  E  R  L  R  E  I  Y  Y  Q  Q  N  L  K  K  M  E  N  D  D  D  D  N  D  H  S  I  K  I  Q  Q  D  V  N  G  S  E  K  K  E  Q  L  V  N  *  S  F  F  Q  L  *  :  D  K  K  N  V  A  *  G  E  A  L  S  R  F  M  W  Y  L  D  L  P  R  K  F  L  I  M  E  G  T  K  I  R  S  L  E  F  L  H  *  S  L  N  F  *  G  S  I  *  T  V  *  I  V  F  F  F  L  R  D  G  C  L  I  I  F  I  F  Q  *  L  I  F  S  I  F  L  I  K  K  N  I  S  M  N  Y  F  Q  K  F  L  L  L  E  G  G  M  W  S  S  L  Y  *  R  L  *  L  V  S  *  L  F  D  V  R  V  M  A  L  F  F  *  S  V  S  F  L  V  S  G  C  Y  F  F  F  I  L  Y  Y  F  L  *  M  *  I  F  L  S  F  Y  Y  C  I  *  N  L  S  F  E  L </second_frame>
            <third_frame>   I  M  M  I  M  L  I  I  L  A  K  K  S  S  I  Q  R  E  L  K   : G  F  W  Q  I  D  N  Q  H  K  G  Q  G  *  E  N  Y  S  T  Y  R  S  *  N  V  A  L  L  H  F  K :   L  K  F  Q  Y  Y  H  Q  E  L  H  F  W  T  I  N  V  W  F  *  M  L  I  I  V  F  L  S  K  E  L  Q  L  L  P  K  I  K  Y  L  K  M  :  L  I  K  K  H  *  R  E  K  *  R  G  *  G  K  Y  I  T  N  R  T  *  R  R  W  K  M  M  M  M  I  M  I  I  Q  *  R  Y  N  K  M  L  M  A  L  R  R  K  N  S  L  S  T  D  H  F  F  S  Y  R :   I  K  R  M  *  L  E  E  K  H  *  A  D  S  C  G  I  W  T  Y  Q  E  S  F  L  L  W  R  G  Q  R  *  G  H  L  N  S  C  I  D  H  S  I  S  R  G  P  Y  K  Q  F  K  L  F  F  F  F  L  G  M  G  V  L  L  F  L  F  F  N  N  *  F  S  L  F  F  *  L  K  K  I  F  L  *  T  T  F  K  N  F  Y  C  W  K  G  A  C  G  V  L  C  I  E  D  C  D  L  S  V  S  C  L  M  S  G  L  W  H  F  F  F  N  Q  C  L  F  L  *  V  V  V  I  F  F  L  S  C  I  I  F  C  K  C  K  Y  F  F  H  F  I  I  V  F  E  I  *  V  S  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17427" stop="17366"/>
                    <exon start="16830" stop="16740"/>
                    <exon start="16642" stop="16516"/>
                    <exon start="16094" stop="15934"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DHDDHVDNSSEKIIDPKRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRVAFLDHQRLVLNVDNSVLKQRIAALAQDKIFKDAHQEALKREIERLREIYYQQNLKKMENDDDDNDHSIKIQQDVNGSEKKEQLVN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17751" e_stop="17366"/>
            <exon e_start="16830" e_stop="16740"/>
            <exon e_start="16642" e_stop="16516"/>
            <exon e_start="16094" e_stop="15813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="0.992"/>
          <exon-intron don_prob="0.975" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="17751" e_stop="17366" e_length="386"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17365" i_stop="16831" i_length="535"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16830" e_stop="16740" e_length="91"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16739" i_stop="16643" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16642" e_stop="16516" e_length="127"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="16515" i_stop="16095" i_length="421"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="16094" e_stop="15813" e_length="282"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17751" stop="17366"/>
              <exon start="16830" stop="16740"/>
              <exon start="16642" stop="16516"/>
              <exon start="16094" stop="15813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17424" stop="17366"/>
              <exon start="16830" stop="16740"/>
              <exon start="16642" stop="16516"/>
              <exon start="16094" stop="15916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272928" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAGATCCATTAGCGATTCGATCGCGTTTCTCGAAGCACCTATGGTTGAAGAATGCCGAATTATTAGGCTATCGAGTTCCGGTACTCGCACGGAATTCGATCGATTCGACGATGACCAACTTATGTCGATGTTTAATGATGAAGACACTGCAAATAATAACGAACGAAACTCCATTCCTTCGTCCCCATCGGATCATAACAGTATTAATTACGAAGAAAAGAAATTGATATTACATGTAGAGGAGCAGCAACAACAACTGAAGATTGAACCTGAAGAAGTTGAAAGTTCATGCAAATCTGATAATGAACAAAATGCTGCTGCTGATCATGATGATCATGTTGATAATTCTAGCGAAAAAATCATCGATCCAAAGAGAATTAAAAG : GATTTTGGCAAATAGACAATCAGCACAAAGGTCAAGGGTGAGAAAATTACAGTACATATCGGAGCTAGAACGTAGCGTTACTACACTTCAA : GCTGAAGTTTCAGTATTATCACCAAGAGTTGCATTTTTGGACCATCAACGTTTGGTTCTAAATGTTGATAATAGTGTTCTTAAGCAAAGAATTGCAGCTCTTGCCCAAGATAAAATATTTAAAGATG : CTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGGTTAAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGATGATGATAATGATCATTCAATAAAGATACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAGCTTGTCAACTGATCATTTTTTCAGCTATAGGTACACTTTTTGTTGTTATTTCATGTTATCGTTAGTGGCGAAGTCAGAAAATTTATCAAAAGGTGCTAGCTAATACTTATTTAACTTCTACGATAATAACAAT</gDNA_template>
            <first_frame> R  R  S  I  S  D  S  I  A  F  L  E  A  P  M  V  E  E  C  R  I  I  R  L  S  S  S  G  T  R  T  E  F  D  R  F  D  D  D  Q  L  M  S  M  F  N  D  E  D  T  A  N  N  N  E  R  N  S  I  P  S  S  P  S  D  H  N  S  I  N  Y  E  E  K  K  L  I  L  H  V  E  E  Q  Q  Q  Q  L  K  I  E  P  E  E  V  E  S  S  C  K  S  D  N  E  Q  N  A  A  A  D  H  D  D  H  V  D  N  S  S  E  K  I  I  D  P  K  R  I  K  R :   I  L  A  N  R  Q  S  A  Q  R  S  R  V  R  K  L  Q  Y  I  S  E  L  E  R  S  V  T  T  L  Q  :  A  E  V  S  V  L  S  P  R  V  A  F  L  D  H  Q  R  L  V  L  N  V  D  N  S  V  L  K  Q  R  I  A  A  L  A  Q  D  K  I  F  K  D   : A  H  Q  E  A  L  K  R  E  I  E  R  L  R  E  I  Y  Y  Q  Q  N  L  K  K  M  E  N  D  D  D  D  N  D  H  S  I  K  I  Q  Q  D  V  N  G  S  E  K  K  E  Q  L  V  N  *  S  F  F  Q  L  *  V  H  F  L  L  L  F  H  V  I  V  S  G  E  V  R  K  F  I  K  R  C  *  L  I  L  I  *  L  L  R  *  *  Q  </first_frame>
            <second_frame>  E  D  P  L  A  I  R  S  R  F  S  K  H  L  W  L  K  N  A  E  L  L  G  Y  R  V  P  V  L  A  R  N  S  I  D  S  T  M  T  N  L  C  R  C  L  M  M  K  T  L  Q  I  I  T  N  E  T  P  F  L  R  P  H  R  I  I  T  V  L  I  T  K  K  R  N  *  Y  Y  M  *  R  S  S  N  N  N  *  R  L  N  L  K  K  L  K  V  H  A  N  L  I  M  N  K  M  L  L  L  I  M  M  I  M  L  I  I  L  A  K  K  S  S  I  Q  R  E  L  K   : G  F  W  Q  I  D  N  Q  H  K  G  Q  G  *  E  N  Y  S  T  Y  R  S  *  N  V  A  L  L  H  F  K :   L  K  F  Q  Y  Y  H  Q  E  L  H  F  W  T  I  N  V  W  F  *  M  L  I  I  V  F  L  S  K  E  L  Q  L  L  P  K  I  K  Y  L  K  M  :  L  I  K  K  H  *  R  E  K  *  R  G  *  G  K  Y  I  T  N  R  T  *  R  R  W  K  M  M  M  M  I  M  I  I  Q  *  R  Y  N  K  M  L  M  A  L  R  R  K  N  S  L  S  T  D  H  F  F  S  Y  R  Y  T  F  C  C  Y  F  M  L  S  L  V  A  K  S  E  N  L  S  K  G  A  S  *  Y  L  F  N  F  Y  D  N  N  N </second_frame>
            <third_frame>   K  I  H  *  R  F  D  R  V  S  R  S  T  Y  G  *  R  M  P  N  Y  *  A  I  E  F  R  Y  S  H  G  I  R  S  I  R  R  *  P  T  Y  V  D  V  *  *  *  R  H  C  K  *  *  R  T  K  L  H  S  F  V  P  I  G  S  *  Q  Y  *  L  R  R  K  E  I  D  I  T  C  R  G  A  A  T  T  T  E  D  *  T  *  R  S  *  K  F  M  Q  I  *  *  *  T  K  C  C  C  *  S  *  *  S  C  *  *  F  *  R  K  N  H  R  S  K  E  N  *  K  :  D  F  G  K  *  T  I  S  T  K  V  K  G  E  K  I  T  V  H  I  G  A  R  T  *  R  Y  Y  T  S   : S  *  S  F  S  I  I  T  K  S  C  I  F  G  P  S  T  F  G  S  K  C  *  *  *  C  S  *  A  K  N  C  S  S  C  P  R  *  N  I  *  R  C :   S  S  R  S  I  E  E  R  N  R  E  V  K  G  N  I  L  P  T  E  L  K  E  D  G  K  *  *  *  *  *  *  S  F  N  K  D  T  T  R  C  *  W  L  *  E  E  R  T  A  C  Q  L  I  I  F  S  A  I  G  T  L  F  V  V  I  S  C  Y  R  *  W  R  S  Q  K  I  Y  Q  K  V  L  A  N  T  Y  L  T  S  T  I  I  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17751" stop="17366"/>
                    <exon start="16830" stop="16740"/>
                    <exon start="16642" stop="16516"/>
                    <exon start="16094" stop="15934"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRSISDSIAFLEAPMVEECRIIRLSSSGTRTEFDRFDDDQLMSMFNDEDTANNNERNSIPSSPSDHNSINYEEKKLILHVEEQQQQLKIEPEEVESSCKSDNEQNAAADHDDHVDNSSEKIIDPKRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRVAFLDHQRLVLNVDNSVLKQRIAALAQDKIFKDAHQEALKREIERLREIYYQQNLKKMENDDDDNDHSIKIQQDVNGSEKKEQLVN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="14451" e_stop="14437"/>
            <exon e_start="13072" e_stop="12761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.933"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="14451" e_stop="14437" e_length="15"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="14436" i_stop="13073" i_length="1364"/>
          </intron>
          <exon e_serial="2" e_score="0.962">
            <gDNA_exon_boundary e_start="13072" e_stop="12761" e_length="312"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14451" stop="14437"/>
              <exon start="13072" stop="12761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220328" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTTTTTTATCTT : ATTAGTCAATACCATTACATGGTATATGTACTATTGTAAAATCCAAAAACTAACACATAAAATAAAGTCATATCCCTATGCAATAATAATCACATTAGAGCTAACATCCATCAATACCTAATGGAATTTTAAGTACTTGAAACTTCTAAAGCATATAACAAAGAAGGCCACAAAACAAAAACATAGATAAACCAGCCTGAGCTATAGTAAGCCTTCTCCAAAAATGCTTGCATAACACCACCTTCCGGCGAGTAATATAAGAAGCACCATGTCGAATGTAAGCTAAACATCTGCAAAAAATCCTGCATTGTC</gDNA_template>
            <first_frame> F  F  F  Y  L  :  I  S  Q  Y  H  Y  M  V  Y  V  L  L  *  N  P  K  T  N  T  *  N  K  V  I  S  L  C  N  N  N  H  I  R  A  N  I  H  Q  Y  L  M  E  F  *  V  L  E  T  S  K  A  Y  N  K  E  G  H  K  T  K  T  *  I  N  Q  P  E  L  *  *  A  F  S  K  N  A  C  I  T  P  P  S  G  E  *  Y  K  K  H  H  V  E  C  K  L  N  I  C  K  K  S  C  I  V </first_frame>
            <second_frame>  F  F  F  I  L :   L  V  N  T  I  T  W  Y  M  Y  Y  C  K  I  Q  K  L  T  H  K  I  K  S  Y  P  Y  A  I  I  I  T  L  E  L  T  S  I  N  T  *  W  N  F  K  Y  L  K  L  L  K  H  I  T  K  K  A  T  K  Q  K  H  R  *  T  S  L  S  Y  S  K  P  S  P  K  M  L  A  *  H  H  L  P  A  S  N  I  R  S  T  M  S  N  V  S  *  T  S  A  K  N  P  A  L   </second_frame>
            <third_frame>   F  F  L  S   : Y  *  S  I  P  L  H  G  I  C  T  I  V  K  S  K  N  *  H  I  K  *  S  H  I  P  M  Q  *  *  S  H  *  S  *  H  P  S  I  P  N  G  I  L  S  T  *  N  F  *  S  I  *  Q  R  R  P  Q  N  K  N  I  D  K  P  A  *  A  I  V  S  L  L  Q  K  C  L  H  N  T  T  F  R  R  V  I  *  E  A  P  C  R  M  *  A  K  H  L  Q  K  I  L  H  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184G23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="20589" PGL_stop="20230"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20589" e_stop="20449"/>
            <exon e_start="20415" e_stop="20230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.872"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.872">
            <gDNA_exon_boundary e_start="20589" e_stop="20449" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20448" i_stop="20416" i_length="33"/>
          </intron>
          <exon e_serial="2" e_score="0.941">
            <gDNA_exon_boundary e_start="20415" e_stop="20230" e_length="186"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20589" stop="20449"/>
              <exon start="20415" stop="20230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTCTCGCTTTATACACAGAAGTGTATAAATTGTACTTCTGTTTTGTATAAAGCAAGAGAAAATTGTATATATACACATGCAAAAACATATATCTTCGTGTTATACACTTAATTATACAATTTACAAACATTTTACTTCA : AATATTACAGAGAAAAAGGTCAACAAATTATACAATTGTGAATTATACAATTGCAGTGAAATACAATTTGCTCTAGCTTTATACAACAGAAGTGTATATATTTTGTTTATGTTTTTGTATAAAGCGAGAGAAAAACATATATCTTCTTGCTATACACTTATAATTATGCAATATACATACATTTTA</gDNA_template>
            <first_frame> L  S  R  F  I  H  R  S  V  *  I  V  L  L  F  C  I  K  Q  E  K  I  V  Y  I  H  M  Q  K  H  I  S  S  C  Y  T  L  N  Y  T  I  Y  K  H  F  T  S  :  N  I  T  E  K  K  V  N  K  L  Y  N  C  E  L  Y  N  C  S  E  I  Q  F  A  L  A  L  Y  N  R  S  V  Y  I  L  F  M  F  L  Y  K  A  R  E  K  H  I  S  S  C  Y  T  L  I  I  M  Q  Y  T  Y  I  L </first_frame>
            <second_frame>  S  L  A  L  Y  T  E  V  Y  K  L  Y  F  C  F  V  *  S  K  R  K  L  Y  I  Y  T  C  K  N  I  Y  L  R  V  I  H  L  I  I  Q  F  T  N  I  L  L  Q :   I  L  Q  R  K  R  S  T  N  Y  T  I  V  N  Y  T  I  A  V  K  Y  N  L  L  *  L  Y  T  T  E  V  Y  I  F  C  L  C  F  C  I  K  R  E  K  N  I  Y  L  L  A  I  H  L  *  L  C  N  I  H  T  F   </second_frame>
            <third_frame>   L  S  L  Y  T  Q  K  C  I  N  C  T  S  V  L  Y  K  A  R  E  N  C  I  Y  T  H  A  K  T  Y  I  F  V  L  Y  T  *  L  Y  N  L  Q  T  F  Y  F   : K  Y  Y  R  E  K  G  Q  Q  I  I  Q  L  *  I  I  Q  L  Q  *  N  T  I  C  S  S  F  I  Q  Q  K  C  I  Y  F  V  Y  V  F  V  *  S  E  R  K  T  Y  I  F  L  L  Y  T  Y  N  Y  A  I  Y  I  H  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20559" stop="20449"/>
                    <exon start="20415" stop="20230"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVLLFCIKQEKIVYIHMQKHISSCYTLNYTIYKHFTSNITEKKVNKLYNCELYNCSEIQFALALYNRSVYILFMFLYKAREKHISSCYTLIIMQYTYIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="20230" PGL_stop="20382"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20230" e_stop="20382"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="20230" e_stop="20382" e_length="153"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20230" stop="20382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392727" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCTCGCTTTATACAAAAACATAAACAAAATATATACACTTCTGTTGTATAAAGCTAGAGCAAATTGTATTTCACTGCAATTGTATAATTCACAATT</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  R  Y  M  F  F  S  R  F  I  Q  K  H  K  Q  N  I  Y  T  S  V  V  *  S  *  S  K  L  Y  F  T  A  I  V  *  F  T  I </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  D  I  C  F  S  L  A  L  Y  K  N  I  N  K  I  Y  T  L  L  L  Y  K  A  R  A  N  C  I  S  L  Q  L  Y  N  S  Q   </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  S  L  Y  T  K  T  *  T  K  Y  I  H  F  C  C  I  K  L  E  Q  I  V  F  H  C  N  C  I  I  H  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184G23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="24448" PGL_stop="26827"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24448" e_stop="24888"/>
            <exon e_start="26153" e_stop="26827"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.950" acc_prob="0.715" e_score="0.998"/>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="24448" e_stop="24888" e_length="441"/>
          </exon>
          <intron i_serial="1" don_prob="0.950" acc_prob="0.715">
            <gDNA_intron_boundary i_start="24889" i_stop="26152" i_length="1264"/>
          </intron>
          <exon e_serial="2" e_score="0.932">
            <gDNA_exon_boundary e_start="26153" e_stop="26827" e_length="675"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24448" stop="24888"/>
              <exon start="26153" stop="26495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689252" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24448" stop="24888"/>
              <exon start="26153" stop="26243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24449" stop="24888"/>
              <exon start="26153" stop="26263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24449" stop="24835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24450" stop="24888"/>
              <exon start="26153" stop="26524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24453" stop="24888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26230" stop="26786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26407" stop="26827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26414" stop="26827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26604" stop="26827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218528" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCAATCTATAGCAATTATGAAGCCATCTTATATTACTTTTTCAAACTTTATGCTATTAATATTTTTAACCTTATGTTATGTCACAAATGCAAGTCAAGATGATCCAATAATTCTCAATAGATACCAAAATTGGGTCAAAAAATACAGAAGAAAATACCAAAATGAAGCTGAATGGAATATGAGATTTGGAATTTATCAATCAAATATTCAATTCATTGATTTCTTCAATTCACTAAACCTTTCTTATAGCCTTACTGATAATGCTTTTGCGGACATGACAAATCGAGAATTTAATTCTATTTATTTAGGTTACGAAAAACCAATACAAGAACAAAAAGACATTAATAATGTTACGTCGTATGATATATCCACATTACCGATTGGTGTCGATTGGAGGAAGGATGGGGTTGTTACACCAATCAAGGATCAAAAAAGTTGCG : GAAGTTGTTGGGCATTTTCAGCAGTAGCAGCAATAGAGGGCATCAACAAGATCAAAACAGGAAAACTTGTGTCACTATCAGAACAACAACTAATGGATTGCGATGTTTACTCAGACAATCAAGGATGTAATGGAGGGTTTATGGAAAGTGCATTTGATTACATAATGGAAAATGGTGGGATTACAACTTCAAAAAATTATCCATACATAGGAAAAGAACAAAAATGTAACACAAAAAAAGCAAAACAACATGAAGTTAGGATAAGTAATTATGAAAAGGTACCACCAAATGAGGAATCACTTCAAGTTGCAATTAACAAACAACCAATATCAGTGGCTATTGATGCAAGTGGCTATAATTTTCAATTATACTCTAGAGGGGTATTTTCTGGCTATTGTGGAAATATGTTAAATCATGCAGTGACATTAATTGGCTATGATGTGGAAGAAAATAATGGTGAGAAATATTGGATAGTAAAAAATTCATGGGGTACTATGTGGGGTGAAAGTGGTTATATGAAAATTAAGAGGGGGTCAAGTGATAATGGAGGAATGTGTGGTATTGCTATGCAAGCTAGTTACCCTCTTATGGAGGAATATGTATAAATAAGTCATAATATGTGCATAAATAAGTCATCATAATAAAATATTTGAAAAATAATTGTGATTCTCCAAA</gDNA_template>
            <first_frame> L  N  L  *  Q  L  *  S  H  L  I  L  L  F  Q  T  L  C  Y  *  Y  F  *  P  Y  V  M  S  Q  M  Q  V  K  M  I  Q  *  F  S  I  D  T  K  I  G  S  K  N  T  E  E  N  T  K  M  K  L  N  G  I  *  D  L  E  F  I  N  Q  I  F  N  S  L  I  S  S  I  H  *  T  F  L  I  A  L  L  I  M  L  L  R  T  *  Q  I  E  N  L  I  L  F  I  *  V  T  K  N  Q  Y  K  N  K  K  T  L  I  M  L  R  R  M  I  Y  P  H  Y  R  L  V  S  I  G  G  R  M  G  L  L  H  Q  S  R  I  K  K  V  A  :  E  V  V  G  H  F  Q  Q  *  Q  Q  *  R  A  S  T  R  S  K  Q  E  N  L  C  H  Y  Q  N  N  N  *  W  I  A  M  F  T  Q  T  I  K  D  V  M  E  G  L  W  K  V  H  L  I  T  *  W  K  M  V  G  L  Q  L  Q  K  I  I  H  T  *  E  K  N  K  N  V  T  Q  K  K  Q  N  N  M  K  L  G  *  V  I  M  K  R  Y  H  Q  M  R  N  H  F  K  L  Q  L  T  N  N  Q  Y  Q  W  L  L  M  Q  V  A  I  I  F  N  Y  T  L  E  G  Y  F  L  A  I  V  E  I  C  *  I  M  Q  *  H  *  L  A  M  M  W  K  K  I  M  V  R  N  I  G  *  *  K  I  H  G  V  L  C  G  V  K  V  V  I  *  K  L  R  G  G  Q  V  I  M  E  E  C  V  V  L  L  C  K  L  V  T  L  L  W  R  N  M  Y  K  *  V  I  I  C  A  *  I  S  H  H  N  K  I  F  E  K  *  L  *  F  S  K </first_frame>
            <second_frame>  S  I  Y  S  N  Y  E  A  I  L  Y  Y  F  F  K  L  Y  A  I  N  I  F  N  L  M  L  C  H  K  C  K  S  R  *  S  N  N  S  Q  *  I  P  K  L  G  Q  K  I  Q  K  K  I  P  K  *  S  *  M  E  Y  E  I  W  N  L  S  I  K  Y  S  I  H  *  F  L  Q  F  T  K  P  F  L  *  P  Y  *  *  C  F  C  G  H  D  K  S  R  I  *  F  Y  L  F  R  L  R  K  T  N  T  R  T  K  R  H  *  *  C  Y  V  V  *  Y  I  H  I  T  D  W  C  R  L  E  E  G  W  G  C  Y  T  N  Q  G  S  K  K  L  R :   K  L  L  G  I  F  S  S  S  S  N  R  G  H  Q  Q  D  Q  N  R  K  T  C  V  T  I  R  T  T  T  N  G  L  R  C  L  L  R  Q  S  R  M  *  W  R  V  Y  G  K  C  I  *  L  H  N  G  K  W  W  D  Y  N  F  K  K  L  S  I  H  R  K  R  T  K  M  *  H  K  K  S  K  T  T  *  S  *  D  K  *  L  *  K  G  T  T  K  *  G  I  T  S  S  C  N  *  Q  T  T  N  I  S  G  Y  *  C  K  W  L  *  F  S  I  I  L  *  R  G  I  F  W  L  L  W  K  Y  V  K  S  C  S  D  I  N  W  L  *  C  G  R  K  *  W  *  E  I  L  D  S  K  K  F  M  G  Y  Y  V  G  *  K  W  L  Y  E  N  *  E  G  V  K  *  *  W  R  N  V  W  Y  C  Y  A  S  *  L  P  S  Y  G  G  I  C  I  N  K  S  *  Y  V  H  K  *  V  I  I  I  K  Y  L  K  N  N  C  D  S  P   </second_frame>
            <third_frame>   Q  S  I  A  I  M  K  P  S  Y  I  T  F  S  N  F  M  L  L  I  F  L  T  L  C  Y  V  T  N  A  S  Q  D  D  P  I  I  L  N  R  Y  Q  N  W  V  K  K  Y  R  R  K  Y  Q  N  E  A  E  W  N  M  R  F  G  I  Y  Q  S  N  I  Q  F  I  D  F  F  N  S  L  N  L  S  Y  S  L  T  D  N  A  F  A  D  M  T  N  R  E  F  N  S  I  Y  L  G  Y  E  K  P  I  Q  E  Q  K  D  I  N  N  V  T  S  Y  D  I  S  T  L  P  I  G  V  D  W  R  K  D  G  V  V  T  P  I  K  D  Q  K  S  C   : G  S  C  W  A  F  S  A  V  A  A  I  E  G  I  N  K  I  K  T  G  K  L  V  S  L  S  E  Q  Q  L  M  D  C  D  V  Y  S  D  N  Q  G  C  N  G  G  F  M  E  S  A  F  D  Y  I  M  E  N  G  G  I  T  T  S  K  N  Y  P  Y  I  G  K  E  Q  K  C  N  T  K  K  A  K  Q  H  E  V  R  I  S  N  Y  E  K  V  P  P  N  E  E  S  L  Q  V  A  I  N  K  Q  P  I  S  V  A  I  D  A  S  G  Y  N  F  Q  L  Y  S  R  G  V  F  S  G  Y  C  G  N  M  L  N  H  A  V  T  L  I  G  Y  D  V  E  E  N  N  G  E  K  Y  W  I  V  K  N  S  W  G  T  M  W  G  E  S  G  Y  M  K  I  K  R  G  S  S  D  N  G  G  M  C  G  I  A  M  Q  A  S  Y  P  L  M  E  E  Y  V  *  I  S  H  N  M  C  I  N  K  S  S  *  *  N  I  *  K  I  I  V  I  L  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24450" stop="24888"/>
                    <exon start="26153" stop="26757"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1041</number_coding_nucleotides>
                  <number_encoded_amino_acids>347</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSIAIMKPSYITFSNFMLLIFLTLCYVTNASQDDPIILNRYQNWVKKYRRKYQNEAEWNMRFGIYQSNIQFIDFFNSLNLSYSLTDNAFADMTNREFNSIYLGYEKPIQEQKDINNVTSYDISTLPIGVDWRKDGVVTPIKDQKSCGSCWAFSAVAAIEGINKIKTGKLVSLSEQQLMDCDVYSDNQGCNGGFMESAFDYIMENGGITTSKNYPYIGKEQKCNTKKAKQHEVRISNYEKVPPNEESLQVAINKQPISVAIDASGYNFQLYSRGVFSGYCGNMLNHAVTLIGYDVEENNGEKYWIVKNSWGTMWGESGYMKIKRGSSDNGGMCGIAMQASYPLMEEYV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="27981" PGL_stop="47318"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27981" e_stop="28371"/>
            <exon e_start="31671" e_stop="31745"/>
            <exon e_start="33227" e_stop="33377"/>
            <exon e_start="33455" e_stop="33523"/>
            <exon e_start="33685" e_stop="33854"/>
            <exon e_start="37922" e_stop="38059"/>
            <exon e_start="38664" e_stop="38789"/>
            <exon e_start="39935" e_stop="40033"/>
            <exon e_start="41835" e_stop="41955"/>
            <exon e_start="42124" e_stop="42187"/>
            <exon e_start="42602" e_stop="42656"/>
            <exon e_start="42744" e_stop="42868"/>
            <exon e_start="43452" e_stop="43525"/>
            <exon e_start="44930" e_stop="44979"/>
            <exon e_start="45842" e_stop="45928"/>
            <exon e_start="46303" e_stop="46353"/>
            <exon e_start="46429" e_stop="46512"/>
            <exon e_start="46770" e_stop="46820"/>
            <exon e_start="46999" e_stop="47318"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.738" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="27981" e_stop="28371" e_length="391"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.738">
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          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
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          <intron i_serial="3" don_prob="0.996" acc_prob="0.985">
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          </intron>
          <exon e_serial="4" e_score="1.000">
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          <intron i_serial="4" don_prob="0.982" acc_prob="0.944">
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          <exon e_serial="5" e_score="1.000">
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          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.928">
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          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="37922" e_stop="38059" e_length="138"/>
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          <intron i_serial="6" don_prob="0.940" acc_prob="1.000">
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          <exon e_serial="7" e_score="1.000">
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          <intron i_serial="7" don_prob="1.000" acc_prob="0.999">
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          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="39935" e_stop="40033" e_length="99"/>
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          <intron i_serial="8" don_prob="1.000" acc_prob="1.000">
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          <intron i_serial="9" don_prob="0.000" acc_prob="0.978">
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          <exon e_serial="12" e_score="1.000">
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          <intron i_serial="12" don_prob="0.971" acc_prob="1.000">
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          <exon e_serial="13" e_score="1.000">
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          <intron i_serial="13" don_prob="0.994" acc_prob="0.973">
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          <intron i_serial="14" don_prob="0.994" acc_prob="1.000">
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          </intron>
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          <intron i_serial="15" don_prob="0.992" acc_prob="0.999">
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          <intron i_serial="16" don_prob="0.990" acc_prob="0.998">
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          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="46429" e_stop="46512" e_length="84"/>
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          <intron i_serial="17" don_prob="0.987" acc_prob="0.998">
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          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
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              <exon start="27981" stop="28371"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207579" strand="+"/>
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          <PGS_line>
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              <exon start="31671" stop="31745"/>
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              <exon start="33455" stop="33523"/>
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            <referenceDNA id="SGN-E736456" strand="+"/>
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          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480671" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="31671" stop="31726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28012" stop="28365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478622" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
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              <exon start="37922" stop="38059"/>
              <exon start="38664" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
              <exon start="44930" stop="44979"/>
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              <exon start="46303" stop="46353"/>
              <exon start="46429" stop="46512"/>
              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746893" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="28027" stop="28371"/>
              <exon start="31671" stop="31745"/>
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              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28027" stop="28322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28028" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28221" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33854"/>
              <exon start="37922" stop="37950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33514" stop="33523"/>
              <exon start="33685" stop="33854"/>
              <exon start="37922" stop="38059"/>
              <exon start="38664" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37934" stop="38059"/>
              <exon start="38664" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38703" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
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              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
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              <exon start="45842" stop="45928"/>
              <exon start="46303" stop="46325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38750" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39953" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
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              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39961" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42627" stop="42656"/>
              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
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              <exon start="46303" stop="46353"/>
              <exon start="46429" stop="46512"/>
              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252308" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42654" stop="42656"/>
              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
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              <exon start="46303" stop="46353"/>
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              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42796" stop="42868"/>
              <exon start="43452" stop="43525"/>
              <exon start="44930" stop="44979"/>
              <exon start="45842" stop="45928"/>
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              <exon start="46429" stop="46512"/>
              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46303" stop="46353"/>
              <exon start="46429" stop="46512"/>
              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230566" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46459" stop="46512"/>
              <exon start="46770" stop="46820"/>
              <exon start="46999" stop="47202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230784" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAAACAAGAGGACTAAGATTTAGCAGAGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG : GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA : GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG : TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG : AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTG : GTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAG : GTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG : GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT : TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG : GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT : GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG : GTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG : AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGA : CTTATGAAAAATATCGTGGTCCTCTTGGAAATGTCAGGAAAGGAGTTCTA : GTATCAATGGGCCGTGGGTTAATCACTGCTCATGCACTGATGGGGTTAGAACCTCGTGGAGTTCTCTTTGTGGCACCTGCAATGGAG : ACATATGATGGCATGATTATTGGAGAACATTCTCGGGATACAGATCTTGAT : GTCAATCCGGTTAAGGCAAAAGAACTCAACAATATAAGGTGCGCTAGCAAGGATGAGAACGTCAAGTTAACTCCTCCCCGCCTT : ATGTCCCTCGAAGAAGCCATAGGATATGTTGCTTCCGATGAGCTTATTGAG : GTTACACCAAAAGCCATTAGGCTAAGAAAGAGATACTTGGAAGTGAACAAGAGAAAATCAATGAGCAAGAGGCCCAAGGATTGAAGCATTTTTCTCACATTTGTATAAATGAAATTTAATTTATCTTCACCTCTACTTAAATGTTCCTCATTTATACACACATCTTTACACTTATAATAGATAGGGAAAAATTGTATAACATAAATATTCTTTTTCAAGCACTCTATCGGGAATGTATTTCAGCGTAACACAGCTTATTAAAAGCCGAGTTACCGAAAATATAAATGCTTGAATGCAATAAAATTTTGTCCTACTTTTAA</gDNA_template>
            <first_frame> V  N  K  R  T  K  I  *  Q  R  S  R  R  A  I  S  L  F  G  V  R  N  G  R  S  I  A  S  I  S  L  V  Y  H  *  E  I  L  L  L  L  S  L  F  S  Y  Q  T  F  I  L  C  S  S  F  L  H  R  H  S  Y  R  P  R  W  L  R  R  H  S  T  R  R  R  S  G  S  W  P  A  Q  E  C  R  G  Y  S  S  R  R  S  W  K  D  Y  S  H  G  *  A  A  S  S  V  R  R  *  Y  T  S  R  A  C  L  R  L  Y  *  P  R  T  R  A  R  H  H  Y  C  F  *   : G  Y  I  H  L  V  E  G  Q  R  A  K  H  G  G  H  S  W  T  R  R  F  W  W  *   : S  *  E  G  C  W  H  G  *  G  S  S  P  C  C  *  C  W  *  R  S  T  C  T  N  K  I  C  S  C  Q  G  P  *  I  W  F  T  P  H  S  S  S  Q  *  S  R  Q  T  C  S :   D  *  R  E  M  *  *  S  *  E  P  C  I  *  S  F  R  K  P  W  C  F  R :   G  T  T  R  F  S  C  S  L  R  F  S  *  R  R  M  G  I  F  H  I  Y  K  K  S  S  *  C  E  G  Y  V  T  I  A  Q  C  Y  C  W  A  C  S  S  T  E  C  Q  P  R  C  P  F  S  D  V   : G  F  H  D  G  E  R  S  L  S  R  S  C  F  D  G  S  C  N  L  W  S  C  S  C  W  *  *  S  T  R  A  E  E  H  R  Q  W  N  C  K  N  *  R  R  E   : G  C  K  A  D  E  K  E  G  Y  E  S  R  S  S  *  *  C  W  C  R  *  H  S  V  L  G  R  F  V  K  S  N  N  W  T  H  S  C  E  C  R   : G  Y  D  S  A  A  H  S  C  A  *  P  P  Y  H  L  H  D  F  R  C  Q  *  F  S  L  S  W  F  *  W  Y  S   : F  D  R  R  E  N  W  *  P  A  A  S  *  I  R  N  E  S  C  H  K  C  S  P  Q  Y  V  R  I  I  *  S  A  G  *  R  *  T  S  V  R :   Y  L  N  *  E  H  E  T  *  R  I  *  A  L  C  L  P  T  *  S  H  :  V  Q  S  R  E  R  Y  *  A  *  A  N  *  R  S  D  Y  *   : G  *  *  R  A  R  R  F  G  H  G  S  T  F  S  Q  A  R  *  S  Y  *  H  G  P  C  S  W  Q  H  G  K  D  *  N  V  S  D  M  S  F  K  :  R  A  S  G  L  *  K  R  V  Q  Q  *  H  P  W  L  W  I  Y  A  S  S  F  S  D :   L  *  K  I  S  W  S  S  W  K  C  Q  E  R  S  S   : S  I  N  G  P  W  V  N  H  C  S  C  T  D  G  V  R  T  S  W  S  S  L  C  G  T  C  N  G   : D  I  *  W  H  D  Y  W  R  T  F  S  G  Y  R  S  *   : C  Q  S  G  *  G  K  R  T  Q  Q  Y  K  V  R  *  Q  G  *  E  R  Q  V  N  S  S  P  P   : Y  V  P  R  R  S  H  R  I  C  C  F  R  *  A  Y  *   : G  Y  T  K  S  H  *  A  K  K  E  I  L  G  S  E  Q  E  K  I  N  E  Q  E  A  Q  G  L  K  H  F  S  H  I  C  I  N  E  I  *  F  I  F  T  S  T  *  M  F  L  I  Y  T  H  I  F  T  L  I  I  D  R  E  K  L  Y  N  I  N  I  L  F  Q  A  L  Y  R  E  C  I  S  A  *  H  S  L  L  K  A  E  L  P  K  I  *  M  L  E  C  N  K  I  L  S  Y  F  * </first_frame>
            <second_frame>  *  T  R  G  L  R  F  S  R  E  A  E  E  P  F  L  S  L  E  F  E  M  V  G  P  L  L  R  S  L  W  S  T  T  R  R  S  F  S  S  S  H  Y  S  H  I  K  P  L  S  Y  A  R  A  F  S  T  A  T  A  T  A  P  V  G  S  A  A  T  A  P  G  G  A  L  D  P  G  R  L  R  N  V  A  V  I  A  H  V  D  H  G  K  T  T  L  M  D  R  L  L  R  Q  C  G  A  D  I  P  H  E  R  A  L  D  S  I  D  L  E  R  E  R  G  I  T  I  A  S  K  :  V  T  S  I  S  W  K  D  K  E  L  N  M  V  D  T  P  G  H  A  D  F  G  G  E  :  V  E  R  V  V  G  M  V  E  G  A  V  L  V  V  D  A  G  E  G  P  L  A  Q  T  K  F  V  L  A  K  A  L  K  Y  G  L  R  P  I  L  L  L  N  K  V  D  K  P  A   : V  T  E  E  R  C  N  E  V  E  S  L  V  F  D  L  F  A  N  L  G  A  S   : E  E  Q  L  D  F  P  V  L  Y  A  S  A  K  E  G  W  A  S  S  I  Y  T  K  S  P  P  D  V  K  D  M  S  Q  L  L  N  A  I  V  G  H  V  P  P  P  S  A  S  L  D  A  P  F  Q  M  L  :  V  S  M  M  E  K  D  P  Y  L  G  R  V  L  T  G  R  V  T  C  G  V  V  R  V  G  D  K  V  Q  G  L  K  N  T  D  N  G  T  V  K  I  E  E  G  K  :  V  V  K  L  M  K  K  K  G  M  R  A  D  P  V  D  S  A  G  A  G  D  I  V  S  L  A  G  L  S  S  P  T  I  G  H  T  V  A  N  A  E  :  V  M  T  A  L  P  T  V  V  L  D  P  P  T  I  S  M  T  F  G  V  N  D  S  P  L  A  G  S  D  G  I  H  :  L  T  G  G  K  I  G  D  R  L  L  A  E  S  E  T  N  L  A  I  N  V  L  P  S  T  S  E  S  Y  E  V  Q  G  R  G  E  L  Q  L   : G  I  L  I  E  N  M  R  R  E  G  F  E  L  S  V  S  P  P  K  V  M :   Y  K  V  E  K  G  T  K  L  E  P  I  E  E  V  T  I  E  :  V  D  D  E  H  V  G  L  V  M  E  A  L  S  H  R  R  G  E  V  T  D  M  G  P  V  P  G  S  M  G  R  T  R  M  C  L  T  C  P  S  R :   G  L  V  G  Y  R  S  V  F  S  S  D  T  R  G  S  G  F  M  H  R  A  F  L   : T  Y  E  K  Y  R  G  P  L  G  N  V  R  K  G  V  L  :  V  S  M  G  R  G  L  I  T  A  H  A  L  M  G  L  E  P  R  G  V  L  F  V  A  P  A  M  E  :  T  Y  D  G  M  I  I  G  E  H  S  R  D  T  D  L  D  :  V  N  P  V  K  A  K  E  L  N  N  I  R  C  A  S  K  D  E  N  V  K  L  T  P  P  R  L  :  M  S  L  E  E  A  I  G  Y  V  A  S  D  E  L  I  E  :  V  T  P  K  A  I  R  L  R  K  R  Y  L  E  V  N  K  R  K  S  M  S  K  R  P  K  D  *  S  I  F  L  T  F  V  *  M  K  F  N  L  S  S  P  L  L  K  C  S  S  F  I  H  T  S  L  H  L  *  *  I  G  K  N  C  I  T  *  I  F  F  F  K  H  S  I  G  N  V  F  Q  R  N  T  A  Y  *  K  P  S  Y  R  K  Y  K  C  L  N  A  I  K  F  C  P  T  F   </second_frame>
            <third_frame>   K  Q  E  D  *  D  L  A  E  K  Q  K  S  H  F  S  L  W  S  S  K  W  S  V  H  C  F  D  L  S  G  L  P  L  G  D  P  S  P  P  L  I  I  L  I  S  N  L  Y  P  M  L  E  L  S  P  P  P  Q  L  P  P  P  L  A  P  P  P  Q  H  P  A  A  L  W  I  L  A  G  S  G  M  S  R  L  *  L  T  S  I  M  E  R  L  L  S  W  I  G  C  F  V  S  A  A  L  I  Y  L  T  S  V  P  *  T  L  L  T  S  N  E  S  A  A  S  L  L  L  L  R :   L  H  P  S  R  G  R  T  K  S  *  T  W  W  T  L  L  D  T  Q  I  L  V  V  K :   L  R  G  L  L  A  W  L  R  E  Q  S  L  L  L  M  L  V  K  V  H  L  H  K  Q  N  L  F  L  P  R  P  L  N  M  V  Y  A  P  F  F  F  S  I  K  *  T  N  L  Q  :  *  L  K  R  D  V  M  K  L  R  A  L  Y  L  I  F  S  Q  T  L  V  L  Q  :  R  N  N  *  I  F  L  F  F  T  L  Q  L  K  K  D  G  H  L  P  Y  I  Q  K  V  L  L  M  *  R  I  C  H  N  C  S  M  L  L  L  G  M  F  L  H  R  V  P  A  *  M  P  L  F  R  C  W :   F  P  *  W  R  K  I  L  I  S  V  V  F  *  R  V  V  *  L  V  E  L  F  V  L  V  I  K  Y  K  G  *  R  T  Q  T  M  E  L  *  K  L  K  K  G  R :   L  *  S  *  *  K  R  R  V  *  E  Q  I  Q  L  I  V  L  V  Q  V  T  *  C  P  W  Q  V  C  Q  V  Q  Q  L  D  T  Q  L  R  M  Q  R :   L  *  Q  R  C  P  Q  L  C  L  T  P  L  P  S  P  *  L  S  V  S  M  I  L  P  *  L  V  L  M  V  F  I :   *  P  E  G  K  L  V  T  G  C  *  L  N  Q  K  R  I  L  P  *  M  F  S  P  V  R  Q  N  H  M  K  C  R  V  E  V  N  F  S  *  :  V  S  *  L  R  T  *  D  V  K  D  L  S  S  L  S  P  H  L  K  S   : C  T  K  *  R  K  V  L  S  L  S  Q  L  K  K  *  L  L  R :   L  M  T  S  T  *  V  W  S  W  K  H  F  L  T  G  E  V  K  L  L  T  W  A  L  F  L  A  A  W  E  G  L  E  C  V  *  H  V  L  Q   : E  G  *  W  A  I  E  A  C  S  A  V  T  P  V  A  L  D  L  C  I  E  L  F  *  :  L  M  K  N  I  V  V  L  L  E  M  S  G  K  E  F  * :   Y  Q  W  A  V  G  *  S  L  L  M  H  *  W  G  *  N  L  V  E  F  S  L  W  H  L  Q  W  R :   H  M  M  A  *  L  L  E  N  I  L  G  I  Q  I  L  M :   S  I  R  L  R  Q  K  N  S  T  I  *  G  A  L  A  R  M  R  T  S  S  *  L  L  P  A  L :   C  P  S  K  K  P  *  D  M  L  L  P  M  S  L  L  R :   L  H  Q  K  P  L  G  *  E  R  D  T  W  K  *  T  R  E  N  Q  *  A  R  G  P  R  I  E  A  F  F  S  H  L  Y  K  *  N  L  I  Y  L  H  L  Y  L  N  V  P  H  L  Y  T  H  L  Y  T  Y  N  R  *  G  K  I  V  *  H  K  Y  S  F  S  S  T  L  S  G  M  Y  F  S  V  T  Q  L  I  K  S  R  V  T  E  N  I  N  A  *  M  Q  *  N  F  V  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27985" stop="28371"/>
                    <exon start="31671" stop="31745"/>
                    <exon start="33227" stop="33377"/>
                    <exon start="33455" stop="33523"/>
                    <exon start="33685" stop="33854"/>
                    <exon start="37922" stop="38059"/>
                    <exon start="38664" stop="38789"/>
                    <exon start="39935" stop="40033"/>
                    <exon start="41835" stop="41955"/>
                    <exon start="42124" stop="42187"/>
                    <exon start="42602" stop="42656"/>
                    <exon start="42744" stop="42868"/>
                    <exon start="43452" stop="43525"/>
                    <exon start="44930" stop="44979"/>
                    <exon start="45842" stop="45928"/>
                    <exon start="46303" stop="46353"/>
                    <exon start="46429" stop="46512"/>
                    <exon start="46770" stop="46820"/>
                    <exon start="46999" stop="47082"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2058</number_coding_nucleotides>
                  <number_encoded_amino_acids>686</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRGLRFSREAEEPFLSLEFEMVGPLLRSLWSTTRRSFSSSHYSHIKPLSYARAFSTATATAPVGSAATAPGGALDPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSIDLERERGITIASKVTSISWKDKELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDKPAVTEERCNEVESLVFDLFANLGASEEQLDFPVLYASAKEGWASSIYTKSPPDVKDMSQLLNAIVGHVPPPSASLDAPFQMLVSMMEKDPYLGRVLTGRVTCGVVRVGDKVQGLKNTDNGTVKIEEGKVVKLMKKKGMRADPVDSAGAGDIVSLAGLSSPTIGHTVANAEVMTALPTVVLDPPTISMTFGVNDSPLAGSDGIHLTGGKIGDRLLAESETNLAINVLPSTSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKVEKGTKLEPIEEVTIEVDDEHVGLVMEALSHRRGEVTDMGPVPGSMGRTRMCLTCPSRGLVGYRSVFSSDTRGSGFMHRAFLTYEKYRGPLGNVRKGVLVSMGRGLITAHALMGLEPRGVLFVAPAMETYDGMIIGEHSRDTDLDVNPVKAKELNNIRCASKDENVKLTPPRLMSLEEAIGYVASDELIEVTPKAIRLRKRYLEVNKRKSMSKRPKD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="27981" e_stop="28371"/>
            <exon e_start="31671" e_stop="31745"/>
            <exon e_start="33227" e_stop="33377"/>
            <exon e_start="33455" e_stop="33523"/>
            <exon e_start="33685" e_stop="33854"/>
            <exon e_start="37922" e_stop="38059"/>
            <exon e_start="38664" e_stop="38789"/>
            <exon e_start="39935" e_stop="40033"/>
            <exon e_start="41835" e_stop="41955"/>
            <exon e_start="42124" e_stop="42187"/>
            <exon e_start="42602" e_stop="42656"/>
            <exon e_start="42744" e_stop="42868"/>
            <exon e_start="43452" e_stop="43941"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.738" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.978" e_score="0.992"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="27981" e_stop="28371" e_length="391"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.738">
            <gDNA_intron_boundary i_start="28372" i_stop="31670" i_length="3299"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31671" e_stop="31745" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31746" i_stop="33226" i_length="1481"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33227" e_stop="33377" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.985">
            <gDNA_intron_boundary i_start="33378" i_stop="33454" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33455" e_stop="33523" e_length="69"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.944">
            <gDNA_intron_boundary i_start="33524" i_stop="33684" i_length="161"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="33685" e_stop="33854" e_length="170"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.928">
            <gDNA_intron_boundary i_start="33855" i_stop="37921" i_length="4067"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="37922" e_stop="38059" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.940" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38060" i_stop="38663" i_length="604"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="38664" e_stop="38789" e_length="126"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="39935" e_stop="40033" e_length="99"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="41835" e_stop="41955" e_length="121"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="42124" e_stop="42187" e_length="64"/>
          </exon>
          <intron i_serial="10" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42188" i_stop="42601" i_length="414"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="42602" e_stop="42656" e_length="55"/>
          </exon>
          <intron i_serial="11" don_prob="0.988" acc_prob="0.998">
            <gDNA_intron_boundary i_start="42657" i_stop="42743" i_length="87"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="42744" e_stop="42868" e_length="125"/>
          </exon>
          <intron i_serial="12" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42869" i_stop="43451" i_length="583"/>
          </intron>
          <exon e_serial="13" e_score="0.922">
            <gDNA_exon_boundary e_start="43452" e_stop="43941" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27981" stop="28371"/>
              <exon start="31671" stop="31727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28005" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28010" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480671" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28010" stop="28371"/>
              <exon start="31671" stop="31726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28012" stop="28365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28027" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28027" stop="28322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28028" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28143" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28221" stop="28371"/>
              <exon start="31671" stop="31745"/>
              <exon start="33227" stop="33377"/>
              <exon start="33455" stop="33523"/>
              <exon start="33685" stop="33854"/>
              <exon start="37922" stop="37950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33514" stop="33523"/>
              <exon start="33685" stop="33854"/>
              <exon start="37922" stop="38059"/>
              <exon start="38664" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37934" stop="38059"/>
              <exon start="38664" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38750" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39953" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42868"/>
              <exon start="43452" stop="43525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39961" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42602" stop="42656"/>
              <exon start="42744" stop="42859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42759" stop="42868"/>
              <exon start="43452" stop="43941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443444" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAAACAAGAGGACTAAGATTTAGCAGAGAAGCAGAAGAGCCATTTCTCTCTTTGGAGTTCGAAATGGTCGGTCCATTGCTTCGATCTCTCTGGTCTACCACTAGGAGATCCTTCTCCTCCTCTCATTATTCTCATATCAAACCTTTATCCTATGCTCGAGCTTTCTCCACCGCCACAGCTACCGCCCCCGTTGGCTCCGCCGCCACAGCACCCGGCGGCGCTCTGGATCCTGGCCGGCTCAGGAATGTCGCGGTTATAGCTCACGTCGATCATGGAAAGACTACTCTCATGGATAGGCTGCTTCGTCAGTGCGGCGCTGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAACGAGAGCGCGGCATCACTATTGCTTCTAAG : GTTACATCCATCTCGTGGAAGGACAAAGAGCTAAACATGGTGGACACTCCTGGACACGCAGATTTTGGTGGTGAA : GTTGAGAGGGTTGTTGGCATGGTTGAGGGAGCAGTCCTTGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCCAAGGCCCTTAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGACAAACCTGCAG : TGACTGAAGAGAGATGTAATGAAGTTGAGAGCCTTGTATTTGATCTTTTCGCAAACCTTGGTGCTTCAG : AGGAACAACTAGATTTTCCTGTTCTTTACGCTTCAGCTAAAGAAGGATGGGCATCTTCCATATATACAAAAAGTCCTCCTGATGTGAAGGATATGTCACAATTGCTCAATGCTATTGTTGGGCATGTTCCTCCACCGAGTGCCAGCCTAGATGCCCCTTTTCAGATGTTG : GTTTCCATGATGGAGAAAGATCCTTATCTCGGTCGTGTTTTGACGGGTCGTGTAACTTGTGGAGTTGTTCGTGTTGGTGATAAAGTACAAGGGCTGAAGAACACAGACAATGGAACTGTAAAAATTGAAGAAGGGAAG : GTTGTAAAGCTGATGAAAAAGAAGGGTATGAGAGCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG : GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT : TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG : GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT : GTACAAAGTAGAGAAAGGTACTAAGCTTGAGCCAATTGAAGAAGTGACTATTGAG : GTTGATGACGAGCACGTAGGTTTGGTCATGGAAGCACTTTCTCACAGGCGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAGCATGGGAAGGACTAGAATGTGTCTGACATGTCCTTCAAG : AGGGCTAGTGGGCTATAGAAGCGTGTTCAGCAGTGACACCCGTGGCTCTGGATTTATGCATCGAGCTTTTCTGAGTATGCTTTTCAACTTATCTTAGTACTATCCTGACAAGTTTATCTGATAATTTCTCCAATTTCGTGCTGTGCACGTCACAGTAGGATCTCCATGCTTATTTATATAATGATAGCAAAACTGCAAAAGAAGGCAAGTATGTGCTAGCAATATGTGGATGTGAGCTTGTTAGCTTAGTTGAACTTTGTAACAACGCATTCTTGTCTGGTATTAGATGGTTCCAGAAATTATATGGGTGTTACAAATGTACCCCTCTTTATATTCCCTGTTCTTTATTTGAATCCACCTTGGGTAAACCATCATTCTTTTTCTTTCTTAAAATTATCCTCTGTGCTTTTGGTCGGCTGAGGTTCTTCATGAGCCAGTTTTATCTTTGACAGGGAGCAGGGAATGTGCATTCTCAGTCCCTCAAATGTTG</gDNA_template>
            <first_frame> V  N  K  R  T  K  I  *  Q  R  S  R  R  A  I  S  L  F  G  V  R  N  G  R  S  I  A  S  I  S  L  V  Y  H  *  E  I  L  L  L  L  S  L  F  S  Y  Q  T  F  I  L  C  S  S  F  L  H  R  H  S  Y  R  P  R  W  L  R  R  H  S  T  R  R  R  S  G  S  W  P  A  Q  E  C  R  G  Y  S  S  R  R  S  W  K  D  Y  S  H  G  *  A  A  S  S  V  R  R  *  Y  T  S  R  A  C  L  R  L  Y  *  P  R  T  R  A  R  H  H  Y  C  F  *   : G  Y  I  H  L  V  E  G  Q  R  A  K  H  G  G  H  S  W  T  R  R  F  W  W  *   : S  *  E  G  C  W  H  G  *  G  S  S  P  C  C  *  C  W  *  R  S  T  C  T  N  K  I  C  S  C  Q  G  P  *  I  W  F  T  P  H  S  S  S  Q  *  S  R  Q  T  C  S :   D  *  R  E  M  *  *  S  *  E  P  C  I  *  S  F  R  K  P  W  C  F  R :   G  T  T  R  F  S  C  S  L  R  F  S  *  R  R  M  G  I  F  H  I  Y  K  K  S  S  *  C  E  G  Y  V  T  I  A  Q  C  Y  C  W  A  C  S  S  T  E  C  Q  P  R  C  P  F  S  D  V   : G  F  H  D  G  E  R  S  L  S  R  S  C  F  D  G  S  C  N  L  W  S  C  S  C  W  *  *  S  T  R  A  E  E  H  R  Q  W  N  C  K  N  *  R  R  E   : G  C  K  A  D  E  K  E  G  Y  E  S  R  S  S  *  *  C  W  C  R  *  H  S  V  L  G  R  F  V  K  S  N  N  W  T  H  S  C  E  C  R   : G  Y  D  S  A  A  H  S  C  A  *  P  P  Y  H  L  H  D  F  R  C  Q  *  F  S  L  S  W  F  *  W  Y  S   : F  D  R  R  E  N  W  *  P  A  A  S  *  I  R  N  E  S  C  H  K  C  S  P  Q  Y  V  R  I  I  *  S  A  G  *  R  *  T  S  V  R :   Y  L  N  *  E  H  E  T  *  R  I  *  A  L  C  L  P  T  *  S  H  :  V  Q  S  R  E  R  Y  *  A  *  A  N  *  R  S  D  Y  *   : G  *  *  R  A  R  R  F  G  H  G  S  T  F  S  Q  A  R  *  S  Y  *  H  G  P  C  S  W  Q  H  G  K  D  *  N  V  S  D  M  S  F  K  :  R  A  S  G  L  *  K  R  V  Q  Q  *  H  P  W  L  W  I  Y  A  S  S  F  S  E  Y  A  F  Q  L  I  L  V  L  S  *  Q  V  Y  L  I  I  S  P  I  S  C  C  A  R  H  S  R  I  S  M  L  I  Y  I  M  I  A  K  L  Q  K  K  A  S  M  C  *  Q  Y  V  D  V  S  L  L  A  *  L  N  F  V  T  T  H  S  C  L  V  L  D  G  S  R  N  Y  M  G  V  T  N  V  P  L  F  I  F  P  V  L  Y  L  N  P  P  W  V  N  H  H  S  F  S  F  L  K  L  S  S  V  L  L  V  G  *  G  S  S  *  A  S  F  I  F  D  R  E  Q  G  M  C  I  L  S  P  S  N  V  </first_frame>
            <second_frame>  *  T  R  G  L  R  F  S  R  E  A  E  E  P  F  L  S  L  E  F  E  M  V  G  P  L  L  R  S  L  W  S  T  T  R  R  S  F  S  S  S  H  Y  S  H  I  K  P  L  S  Y  A  R  A  F  S  T  A  T  A  T  A  P  V  G  S  A  A  T  A  P  G  G  A  L  D  P  G  R  L  R  N  V  A  V  I  A  H  V  D  H  G  K  T  T  L  M  D  R  L  L  R  Q  C  G  A  D  I  P  H  E  R  A  L  D  S  I  D  L  E  R  E  R  G  I  T  I  A  S  K  :  V  T  S  I  S  W  K  D  K  E  L  N  M  V  D  T  P  G  H  A  D  F  G  G  E  :  V  E  R  V  V  G  M  V  E  G  A  V  L  V  V  D  A  G  E  G  P  L  A  Q  T  K  F  V  L  A  K  A  L  K  Y  G  L  R  P  I  L  L  L  N  K  V  D  K  P  A   : V  T  E  E  R  C  N  E  V  E  S  L  V  F  D  L  F  A  N  L  G  A  S   : E  E  Q  L  D  F  P  V  L  Y  A  S  A  K  E  G  W  A  S  S  I  Y  T  K  S  P  P  D  V  K  D  M  S  Q  L  L  N  A  I  V  G  H  V  P  P  P  S  A  S  L  D  A  P  F  Q  M  L  :  V  S  M  M  E  K  D  P  Y  L  G  R  V  L  T  G  R  V  T  C  G  V  V  R  V  G  D  K  V  Q  G  L  K  N  T  D  N  G  T  V  K  I  E  E  G  K  :  V  V  K  L  M  K  K  K  G  M  R  A  D  P  V  D  S  A  G  A  G  D  I  V  S  L  A  G  L  S  S  P  T  I  G  H  T  V  A  N  A  E  :  V  M  T  A  L  P  T  V  V  L  D  P  P  T  I  S  M  T  F  G  V  N  D  S  P  L  A  G  S  D  G  I  H  :  L  T  G  G  K  I  G  D  R  L  L  A  E  S  E  T  N  L  A  I  N  V  L  P  S  T  S  E  S  Y  E  V  Q  G  R  G  E  L  Q  L   : G  I  L  I  E  N  M  R  R  E  G  F  E  L  S  V  S  P  P  K  V  M :   Y  K  V  E  K  G  T  K  L  E  P  I  E  E  V  T  I  E  :  V  D  D  E  H  V  G  L  V  M  E  A  L  S  H  R  R  G  E  V  T  D  M  G  P  V  P  G  S  M  G  R  T  R  M  C  L  T  C  P  S  R :   G  L  V  G  Y  R  S  V  F  S  S  D  T  R  G  S  G  F  M  H  R  A  F  L  S  M  L  F  N  L  S  *  Y  Y  P  D  K  F  I  *  *  F  L  Q  F  R  A  V  H  V  T  V  G  S  P  C  L  F  I  *  *  *  Q  N  C  K  R  R  Q  V  C  A  S  N  M  W  M  *  A  C  *  L  S  *  T  L  *  Q  R  I  L  V  W  Y  *  M  V  P  E  I  I  W  V  L  Q  M  Y  P  S  L  Y  S  L  F  F  I  *  I  H  L  G  *  T  I  I  L  F  L  S  *  N  Y  P  L  C  F  W  S  A  E  V  L  H  E  P  V  L  S  L  T  G  S  R  E  C  A  F  S  V  P  Q  M  L </second_frame>
            <third_frame>   K  Q  E  D  *  D  L  A  E  K  Q  K  S  H  F  S  L  W  S  S  K  W  S  V  H  C  F  D  L  S  G  L  P  L  G  D  P  S  P  P  L  I  I  L  I  S  N  L  Y  P  M  L  E  L  S  P  P  P  Q  L  P  P  P  L  A  P  P  P  Q  H  P  A  A  L  W  I  L  A  G  S  G  M  S  R  L  *  L  T  S  I  M  E  R  L  L  S  W  I  G  C  F  V  S  A  A  L  I  Y  L  T  S  V  P  *  T  L  L  T  S  N  E  S  A  A  S  L  L  L  L  R :   L  H  P  S  R  G  R  T  K  S  *  T  W  W  T  L  L  D  T  Q  I  L  V  V  K :   L  R  G  L  L  A  W  L  R  E  Q  S  L  L  L  M  L  V  K  V  H  L  H  K  Q  N  L  F  L  P  R  P  L  N  M  V  Y  A  P  F  F  F  S  I  K  *  T  N  L  Q  :  *  L  K  R  D  V  M  K  L  R  A  L  Y  L  I  F  S  Q  T  L  V  L  Q  :  R  N  N  *  I  F  L  F  F  T  L  Q  L  K  K  D  G  H  L  P  Y  I  Q  K  V  L  L  M  *  R  I  C  H  N  C  S  M  L  L  L  G  M  F  L  H  R  V  P  A  *  M  P  L  F  R  C  W :   F  P  *  W  R  K  I  L  I  S  V  V  F  *  R  V  V  *  L  V  E  L  F  V  L  V  I  K  Y  K  G  *  R  T  Q  T  M  E  L  *  K  L  K  K  G  R :   L  *  S  *  *  K  R  R  V  *  E  Q  I  Q  L  I  V  L  V  Q  V  T  *  C  P  W  Q  V  C  Q  V  Q  Q  L  D  T  Q  L  R  M  Q  R :   L  *  Q  R  C  P  Q  L  C  L  T  P  L  P  S  P  *  L  S  V  S  M  I  L  P  *  L  V  L  M  V  F  I :   *  P  E  G  K  L  V  T  G  C  *  L  N  Q  K  R  I  L  P  *  M  F  S  P  V  R  Q  N  H  M  K  C  R  V  E  V  N  F  S  *  :  V  S  *  L  R  T  *  D  V  K  D  L  S  S  L  S  P  H  L  K  S   : C  T  K  *  R  K  V  L  S  L  S  Q  L  K  K  *  L  L  R :   L  M  T  S  T  *  V  W  S  W  K  H  F  L  T  G  E  V  K  L  L  T  W  A  L  F  L  A  A  W  E  G  L  E  C  V  *  H  V  L  Q   : E  G  *  W  A  I  E  A  C  S  A  V  T  P  V  A  L  D  L  C  I  E  L  F  *  V  C  F  S  T  Y  L  S  T  I  L  T  S  L  S  D  N  F  S  N  F  V  L  C  T  S  Q  *  D  L  H  A  Y  L  Y  N  D  S  K  T  A  K  E  G  K  Y  V  L  A  I  C  G  C  E  L  V  S  L  V  E  L  C  N  N  A  F  L  S  G  I  R  W  F  Q  K  L  Y  G  C  Y  K  C  T  P  L  Y  I  P  C  S  L  F  E  S  T  L  G  K  P  S  F  F  F  F  L  K  I  I  L  C  A  F  G  R  L  R  F  F  M  S  Q  F  Y  L  *  Q  G  A  G  N  V  H  S  Q  S  L  K  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27985" stop="28371"/>
                    <exon start="31671" stop="31745"/>
                    <exon start="33227" stop="33377"/>
                    <exon start="33455" stop="33523"/>
                    <exon start="33685" stop="33854"/>
                    <exon start="37922" stop="38059"/>
                    <exon start="38664" stop="38789"/>
                    <exon start="39935" stop="40033"/>
                    <exon start="41835" stop="41955"/>
                    <exon start="42124" stop="42187"/>
                    <exon start="42602" stop="42656"/>
                    <exon start="42744" stop="42868"/>
                    <exon start="43452" stop="43548"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1674</number_coding_nucleotides>
                  <number_encoded_amino_acids>558</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRGLRFSREAEEPFLSLEFEMVGPLLRSLWSTTRRSFSSSHYSHIKPLSYARAFSTATATAPVGSAATAPGGALDPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSIDLERERGITIASKVTSISWKDKELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDKPAVTEERCNEVESLVFDLFANLGASEEQLDFPVLYASAKEGWASSIYTKSPPDVKDMSQLLNAIVGHVPPPSASLDAPFQMLVSMMEKDPYLGRVLTGRVTCGVVRVGDKVQGLKNTDNGTVKIEEGKVVKLMKKKGMRADPVDSAGAGDIVSLAGLSSPTIGHTVANAEVMTALPTVVLDPPTISMTFGVNDSPLAGSDGIHLTGGKIGDRLLAESETNLAINVLPSTSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKVEKGTKLEPIEEVTIEVDDEHVGLVMEALSHRRGEVTDMGPVPGSMGRTRMCLTCPSRGLVGYRSVFSSDTRGSGFMHRAFLSMLFNLS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43610" stop="43900"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLHAYLYNDSKTAKEGKYVLAICGCELVSLVELCNNAFLSGIRWFQKLYGCYKCTPLYIPCSLFESTLGKPSFFFFLKIILCAFGRLRFFMSQFYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="38703" e_stop="38789"/>
            <exon e_start="39935" e_stop="40033"/>
            <exon e_start="41835" e_stop="41955"/>
            <exon e_start="42124" e_stop="42187"/>
            <exon e_start="42315" e_stop="42323"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.978" e_score="0.992"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="0.953"/>
          <exon-only e_score="0.556"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="38703" e_stop="38789" e_length="87"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="38790" i_stop="39934" i_length="1145"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="39935" e_stop="40033" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="40034" i_stop="41834" i_length="1801"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="41835" e_stop="41955" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="41956" i_stop="42123" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="0.953">
            <gDNA_exon_boundary e_start="42124" e_stop="42187" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42188" i_stop="42314" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="0.556">
            <gDNA_exon_boundary e_start="42315" e_stop="42323" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38703" stop="38789"/>
              <exon start="39935" stop="40033"/>
              <exon start="41835" stop="41955"/>
              <exon start="42124" stop="42187"/>
              <exon start="42315" stop="42323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255186" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCCTTGGCAGGTTTGTCAAGTCCAACAATTGGACACACAGTTGCGAATGCAGAG : GTTATGACAGCGCTGCCCACAGTTGTGCTTGACCCCCCTACCATCTCCATGACTTTCGGTGTCAATGATTCTCCCTTAGCTGGTTCTGATGGTATTCAT : TTGACCGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAATCAGAAACGAATCTTGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGTGAACTTCAGTTAG : GTATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTCTCCCCACCTAAAGTCAT : GAGATACAG</gDNA_template>
            <first_frame> P  V  D  S  A  G  A  G  D  I  V  S  L  A  G  L  S  S  P  T  I  G  H  T  V  A  N  A  E  :  V  M  T  A  L  P  T  V  V  L  D  P  P  T  I  S  M  T  F  G  V  N  D  S  P  L  A  G  S  D  G  I  H  :  L  T  G  G  K  I  G  D  R  L  L  A  E  S  E  T  N  L  A  I  N  V  L  P  S  T  S  E  S  Y  E  V  Q  G  R  G  E  L  Q  L   : G  I  L  I  E  N  M  R  R  E  G  F  E  L  S  V  S  P  P  K  V  M :   R  Y   </first_frame>
            <second_frame>  Q  L  I  V  L  V  Q  V  T  *  C  P  W  Q  V  C  Q  V  Q  Q  L  D  T  Q  L  R  M  Q  R :   L  *  Q  R  C  P  Q  L  C  L  T  P  L  P  S  P  *  L  S  V  S  M  I  L  P  *  L  V  L  M  V  F  I :   *  P  E  G  K  L  V  T  G  C  *  L  N  Q  K  R  I  L  P  *  M  F  S  P  V  R  Q  N  H  M  K  C  R  V  E  V  N  F  S  *  :  V  S  *  L  R  T  *  D  V  K  D  L  S  S  L  S  P  H  L  K  S   : *  D  T  </second_frame>
            <third_frame>   S  *  *  C  W  C  R  *  H  S  V  L  G  R  F  V  K  S  N  N  W  T  H  S  C  E  C  R   : G  Y  D  S  A  A  H  S  C  A  *  P  P  Y  H  L  H  D  F  R  C  Q  *  F  S  L  S  W  F  *  W  Y  S   : F  D  R  R  E  N  W  *  P  A  A  S  *  I  R  N  E  S  C  H  K  C  S  P  Q  Y  V  R  I  I  *  S  A  G  *  R  *  T  S  V  R :   Y  L  N  *  E  H  E  T  *  R  I  *  A  L  C  L  P  T  *  S  H  :  E  I  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38703" stop="38789"/>
                    <exon start="39935" stop="40033"/>
                    <exon start="41835" stop="41955"/>
                    <exon start="42124" stop="42187"/>
                    <exon start="42315" stop="42321"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PVDSAGAGDIVSLAGLSSPTIGHTVANAEVMTALPTVVLDPPTISMTFGVNDSPLAGSDGIHLTGGKIGDRLLAESETNLAINVLPSTSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMRY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="48334" PGL_stop="50510"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48334" e_stop="48589"/>
            <exon e_start="50196" e_stop="50510"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.781" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48334" e_stop="48589" e_length="256"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.781">
            <gDNA_intron_boundary i_start="48590" i_stop="50195" i_length="1606"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="50196" e_stop="50510" e_length="315"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48334" stop="48589"/>
              <exon start="50196" stop="50444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48355" stop="48589"/>
              <exon start="50196" stop="50510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48366" stop="48589"/>
              <exon start="50196" stop="50255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318430" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGATCTCACTTTGTGCCCTCCACATCTGAGAAAATGGGGGCATACAGAGCCGACGACGATTACGATTACTTGTTCAAGGTGGTGTTGATTGGTGATTCCGGTGTCGGAAAGTCTAATCTTCTTTCTAGATTCAGTCGTAATGAGTTCAGCCTTGAGTCTAAGTCTACTATCGGTGTTGAGTTCGCTACTCGAAGCATTCATGTGGAGGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAACG : ATATCGAGCAATCACGAGTGCTTACTATCGAGGAGCTGTTGGTGCATTGCTGGTTTATGATGTCACTCGTCATGTGACTTTTGAGAATGTGGAGAGATGGTTGAAGGAGCTCAGAGATCATACTGACTCAAACATTGTCATAATGCTTGTGGGAAATAAGGCAGATTTGCGTCACTTACGAGCTGTTTCCACTGAGGATGCCAAGGCATTTGCTGAGAAGGAAAGTACATTTTTCATGGAAACATCTGCTCTGGAATCCATGAATGTGGAAAACGCCTTCACAGAAGTGCTCACACAAATATACCGTGTCGTGAA</gDNA_template>
            <first_frame> S  D  L  T  L  C  P  P  H  L  R  K  W  G  H  T  E  P  T  T  I  T  I  T  C  S  R  W  C  *  L  V  I  P  V  S  E  S  L  I  F  F  L  D  S  V  V  M  S  S  A  L  S  L  S  L  L  S  V  L  S  S  L  L  E  A  F  M  W  R  I  R  L  L  K  L  R  F  G  I  L  L  V  R  N   : D  I  E  Q  S  R  V  L  T  I  E  E  L  L  V  H  C  W  F  M  M  S  L  V  M  *  L  L  R  M  W  R  D  G  *  R  S  S  E  I  I  L  T  Q  T  L  S  *  C  L  W  E  I  R  Q  I  C  V  T  Y  E  L  F  P  L  R  M  P  R  H  L  L  R  R  K  V  H  F  S  W  K  H  L  L  W  N  P  *  M  W  K  T  P  S  Q  K  C  S  H  K  Y  T  V  S  *  </first_frame>
            <second_frame>  Q  I  S  L  C  A  L  H  I  *  E  N  G  G  I  Q  S  R  R  R  L  R  L  L  V  Q  G  G  V  D  W  *  F  R  C  R  K  V  *  S  S  F  *  I  Q  S  *  *  V  Q  P  *  V  *  V  Y  Y  R  C  *  V  R  Y  S  K  H  S  C  G  G  *  G  C  *  S  S  D  L  G  Y  C  W  S  G  T  :  I  S  S  N  H  E  C  L  L  S  R  S  C  W  C  I  A  G  L  *  C  H  S  S  C  D  F  *  E  C  G  E  M  V  E  G  A  Q  R  S  Y  *  L  K  H  C  H  N  A  C  G  K  *  G  R  F  A  S  L  T  S  C  F  H  *  G  C  Q  G  I  C  *  E  G  K  Y  I  F  H  G  N  I  C  S  G  I  H  E  C  G  K  R  L  H  R  S  A  H  T  N  I  P  C  R  E </second_frame>
            <third_frame>   R  S  H  F  V  P  S  T  S  E  K  M  G  A  Y  R  A  D  D  D  Y  D  Y  L  F  K  V  V  L  I  G  D  S  G  V  G  K  S  N  L  L  S  R  F  S  R  N  E  F  S  L  E  S  K  S  T  I  G  V  E  F  A  T  R  S  I  H  V  E  D  K  V  V  K  A  Q  I  W  D  T  A  G  Q  E  R :   Y  R  A  I  T  S  A  Y  Y  R  G  A  V  G  A  L  L  V  Y  D  V  T  R  H  V  T  F  E  N  V  E  R  W  L  K  E  L  R  D  H  T  D  S  N  I  V  I  M  L  V  G  N  K  A  D  L  R  H  L  R  A  V  S  T  E  D  A  K  A  F  A  E  K  E  S  T  F  F  M  E  T  S  A  L  E  S  M  N  V  E  N  A  F  T  E  V  L  T  Q  I  Y  R  V  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48336" stop="48589"/>
                    <exon start="50196" stop="50508"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSHFVPSTSEKMGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFSRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAEKESTFFMETSALESMNVENAFTEVLTQIYRVV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="56077" PGL_stop="57414"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56077" e_stop="56823"/>
            <exon e_start="57098" e_stop="57414"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.000" e_score="0.947"/>
          <exon-only e_score="0.864"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="56077" e_stop="56823" e_length="747"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.000">
            <gDNA_intron_boundary i_start="56824" i_stop="57097" i_length="274"/>
          </intron>
          <exon e_serial="2" e_score="0.864">
            <gDNA_exon_boundary e_start="57098" e_stop="57414" e_length="317"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56077" stop="56772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56077" stop="56645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56087" stop="56820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56095" stop="56441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56120" stop="56818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56120" stop="56701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482241" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56152" stop="56700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56167" stop="56819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56551" stop="56823"/>
              <exon start="57098" stop="57414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428180" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGCCGTTACCGTCGCCGGTGATCGACCTTGAAGAGATAATGAAGTTCACTGACTCGCCGGTGATCGACCTTAAAGTCCTCGATTCTCAGCTAGCTTTCCATCAAGACAATGGATCTATGCATGTCGGCACCAGTGTATGGCCCTGTTCACTAGTCCTTGTCAAGTTCGGTGAAAGGTGGCATCCTCAAACATGCGCCGTGAACCCAAATCCCTATGCTGAAATCCTTAACTTTCACAACAAGCGCGGTGTAGAGCTCGGAGCCGGCTGTGGAGTAGCAGCGATGGGGCTTTTCTTATTAGGTCTAAACAACGTCGTTATCACCGATATTGCTCCGGTTATGCCAGCCCTAAAGCACAATCTGAAGCGAAACAAGCCTGTTTTGAAGAAGAGTTTGAAGACGGCTCAGTTGAACTGGTCCAATCAGGATCAGATAAAATCACTCGGCCCGCCGTTTGATGTCGTCATCGCCGCCGATGTGGTGTACTTGGAGGAGACGGTTGGTCCGTTGCTGTCGGCTATGGATGCTTTGGTGGGAGAAAACGGTGTCGTTTTGTTGGGGTATCAGCTGAGATCTCCTGAGGCGCATGAGAAGTTCTGGGAGCTTTGTGGAGAGATGTTTGACGTCGAAAAGGTTCCACACGAGCATTTACATCCAGAATACGCCTATGAGGAGACTGACGTTTATATTTTCAGGAAGAAGAAGAAACTATAGGACCCCCTCCTTCGAAATTTTGTAATCTTAACAG : ACATTGAAGAGAATAATAATATTGGTTGAAGGATTTAAGATTTTAGTCGATAAATAAGAAAATGAAGTGTCAGCTTCAACTTTCAAGTCTCAGCTATTTTTCCTAAGAACTCCTTTACCGGATGGTGTTCTTGGTGCAAGAGCAATCACTTGTCCAGCTTAAACCCCTCGAAATAAACTGCTACTACTATTATACCTCGACCCCGAGCTAGTTGGGTTCAATTGTATGAATACTTTATGTCATAAATGCAACCTCTGCAATTTTCCATTGTAAACGATTTGCCCCTGTTAAGGATTGGCGGCAGAGTTCTTTCCCTG</gDNA_template>
            <first_frame> R  R  Y  R  R  R  *  S  T  L  K  R  *  *  S  S  L  T  R  R  *  S  T  L  K  S  S  I  L  S  *  L  S  I  K  T  M  D  L  C  M  S  A  P  V  Y  G  P  V  H  *  S  L  S  S  S  V  K  G  G  I  L  K  H  A  P  *  T  Q  I  P  M  L  K  S  L  T  F  T  T  S  A  V  *  S  S  E  P  A  V  E  *  Q  R  W  G  F  S  Y  *  V  *  T  T  S  L  S  P  I  L  L  R  L  C  Q  P  *  S  T  I  *  S  E  T  S  L  F  *  R  R  V  *  R  R  L  S  *  T  G  P  I  R  I  R  *  N  H  S  A  R  R  L  M  S  S  S  P  P  M  W  C  T  W  R  R  R  L  V  R  C  C  R  L  W  M  L  W  W  E  K  T  V  S  F  C  W  G  I  S  *  D  L  L  R  R  M  R  S  S  G  S  F  V  E  R  C  L  T  S  K  R  F  H  T  S  I  Y  I  Q  N  T  P  M  R  R  L  T  F  I  F  S  G  R  R  R  N  Y  R  T  P  S  F  E  I  L  *  S  *  Q  :  T  L  K  R  I  I  I  L  V  E  G  F  K  I  L  V  D  K  *  E  N  E  V  S  A  S  T  F  K  S  Q  L  F  F  L  R  T  P  L  P  D  G  V  L  G  A  R  A  I  T  C  P  A  *  T  P  R  N  K  L  L  L  L  L  Y  L  D  P  E  L  V  G  F  N  C  M  N  T  L  C  H  K  C  N  L  C  N  F  P  L  *  T  I  C  P  C  *  G  L  A  A  E  F  F  P   </first_frame>
            <second_frame>  A  V  T  V  A  G  D  R  P  *  R  D  N  E  V  H  *  L  A  G  D  R  P  *  S  P  R  F  S  A  S  F  P  S  R  Q  W  I  Y  A  C  R  H  Q  C  M  A  L  F  T  S  P  C  Q  V  R  *  K  V  A  S  S  N  M  R  R  E  P  K  S  L  C  *  N  P  *  L  S  Q  Q  A  R  C  R  A  R  S  R  L  W  S  S  S  D  G  A  F  L  I  R  S  K  Q  R  R  Y  H  R  Y  C  S  G  Y  A  S  P  K  A  Q  S  E  A  K  Q  A  C  F  E  E  E  F  E  D  G  S  V  E  L  V  Q  S  G  S  D  K  I  T  R  P  A  V  *  C  R  H  R  R  R  C  G  V  L  G  G  D  G  W  S  V  A  V  G  Y  G  C  F  G  G  R  K  R  C  R  F  V  G  V  S  A  E  I  S  *  G  A  *  E  V  L  G  A  L  W  R  D  V  *  R  R  K  G  S  T  R  A  F  T  S  R  I  R  L  *  G  D  *  R  L  Y  F  Q  E  E  E  E  T  I  G  P  P  P  S  K  F  C  N  L  N  R :   H  *  R  E  *  *  Y  W  L  K  D  L  R  F  *  S  I  N  K  K  M  K  C  Q  L  Q  L  S  S  L  S  Y  F  S  *  E  L  L  Y  R  M  V  F  L  V  Q  E  Q  S  L  V  Q  L  K  P  L  E  I  N  C  Y  Y  Y  Y  T  S  T  P  S  *  L  G  S  I  V  *  I  L  Y  V  I  N  A  T  S  A  I  F  H  C  K  R  F  A  P  V  K  D  W  R  Q  S  S  F  P  </second_frame>
            <third_frame>   P  L  P  S  P  V  I  D  L  E  E  I  M  K  F  T  D  S  P  V  I  D  L  K  V  L  D  S  Q  L  A  F  H  Q  D  N  G  S  M  H  V  G  T  S  V  W  P  C  S  L  V  L  V  K  F  G  E  R  W  H  P  Q  T  C  A  V  N  P  N  P  Y  A  E  I  L  N  F  H  N  K  R  G  V  E  L  G  A  G  C  G  V  A  A  M  G  L  F  L  L  G  L  N  N  V  V  I  T  D  I  A  P  V  M  P  A  L  K  H  N  L  K  R  N  K  P  V  L  K  K  S  L  K  T  A  Q  L  N  W  S  N  Q  D  Q  I  K  S  L  G  P  P  F  D  V  V  I  A  A  D  V  V  Y  L  E  E  T  V  G  P  L  L  S  A  M  D  A  L  V  G  E  N  G  V  V  L  L  G  Y  Q  L  R  S  P  E  A  H  E  K  F  W  E  L  C  G  E  M  F  D  V  E  K  V  P  H  E  H  L  H  P  E  Y  A  Y  E  E  T  D  V  Y  I  F  R  K  K  K  K  L  *  D  P  L  L  R  N  F  V  I  L  T   : D  I  E  E  N  N  N  I  G  *  R  I  *  D  F  S  R  *  I  R  K  *  S  V  S  F  N  F  Q  V  S  A  I  F  P  K  N  S  F  T  G  W  C  S  W  C  K  S  N  H  L  S  S  L  N  P  S  K  *  T  A  T  T  I  I  P  R  P  R  A  S  W  V  Q  L  Y  E  Y  F  M  S  *  M  Q  P  L  Q  F  S  I  V  N  D  L  P  L  L  R  I  G  G  R  V  L  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184G23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56079" stop="56789"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLPSPVIDLEEIMKFTDSPVIDLKVLDSQLAFHQDNGSMHVGTSVWPCSLVLVKFGERWHPQTCAVNPNPYAEILNFHNKRGVELGAGCGVAAMGLFLLGLNNVVITDIAPVMPALKHNLKRNKPVLKKSLKTAQLNWSNQDQIKSLGPPFDVVIAADVVYLEETVGPLLSAMDALVGENGVVLLGYQLRSPEAHEKFWELCGEMFDVEKVPHEHLHPEYAYEETDVYIFRKKKKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="67339" PGL_stop="66915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67339" e_stop="66915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="67339" e_stop="66915" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67339" stop="66915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380017" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACCAAGATTTACGTGAAAAACTCTTCGATGTGAAGAGTAAAAAAATCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTAAAATATTGTTCTCCAAAATTGGCCACAAAAAAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTATTCACGACAACAAAACTGAAGCTGCAGGCCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGTAATTTGAAGTTGGCTGTTAGGGCTGAATTTTGACTGCGAAAATCTGCTCTTTTTCTCTCTTTTTGGCCGCTAAAAAACTCTCTGTGTATTTG</gDNA_template>
            <first_frame> H  Q  D  L  R  E  K  L  F  D  V  K  S  K  K  I  T  G  P  K  A  P  L  *  S  P  R  V  K  I  L  F  S  K  I  G  H  K  K  S  A  K  Q  R  A  T  T  K  *  D  C  T  K  S  R  E  L  K  E  Q  N  H  Q  F  R  S  Y  Y  S  R  Q  Q  N  *  S  C  R  P  P  N  P  T  L  S  V  P  N  Q  R  L  R  *  R  *  Y  A  V  Q  K  S  A  Q  S  D  K  K  R  S  G  N  R  N  L  K  L  A  V  R  A  E  F  *  L  R  K  S  A  L  F  L  S  F  W  P  L  K  N  S  L  C  I   </first_frame>
            <second_frame>  T  K  I  Y  V  K  N  S  S  M  *  R  V  K  K  S  R  D  Q  K  L  H  Y  N  H  Q  E  L  K  Y  C  S  P  K  L  A  T  K  K  V  P  N  N  E  Q  Q  Q  N  K  I  A  P  N  L  E  N  *  R  S  K  I  T  N  F  A  A  T  I  H  D  N  K  T  E  A  A  G  H  Q  I  Q  L  C  Q  F  L  I  K  D  *  D  E  D  N  M  L  S  K  N  Q  L  N  R  T  R  N  E  A  G  I  V  I  *  S  W  L  L  G  L  N  F  D  C  E  N  L  L  F  F  S  L  F  G  R  *  K  T  L  C  V  F  </second_frame>
            <third_frame>   P  R  F  T  *  K  T  L  R  C  E  E  *  K  N  H  G  T  K  S  S  T  I  I  T  K  S  *  N  I  V  L  Q  N  W  P  Q  K  K  C  Q  T  T  S  N  N  K  I  R  L  H  Q  I  *  R  I  K  G  A  K  S  P  I  S  Q  L  L  F  T  T  T  K  L  K  L  Q  A  T  K  S  N  S  V  S  S  *  S  K  I  E  M  K  I  I  C  C  P  K  I  S  S  I  G  Q  E  T  K  R  E  S  *  F  E  V  G  C  *  G  *  I  L  T  A  K  I  C  S  F  S  L  F  L  A  A  K  K  L  S  V  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184G23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 248 chains have been computed
$ 
$ memory statistics:
$ 179776 bytes spliced alignments in total
$ 82 spliced alignments have been stored
$ 2192 bytes was the average size of a spliced alignment
$ 20768 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1730 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 300 backtrace matrices have been allocated
$ 
$ date finished: 2008-11-23 02:02:53
-->
