<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-07 04:54:28"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E711449" ref_strand="+" ref_description="SGN-E711449 [FB02AB09]">
      <seq>attttattctcaaattctattacacatatagtcctctatcatgctccacatttagcaacaaaatggaacttatactcatgttattatgtacgttgattgttacgttgatgattcaaggatgttgtcatgaggtgataaaagggccaattattaggcctcatggtctaagtttacgcgaatttggttacgatgaatcaacattggagtattacaaaagaagggcaatgttgttagatgtaggaaccatgagggttgctccacaaggaccagatgctcaacatcactcgcaatcaccaacaatgtcataagacacgaggatgaataaaatagtgtgtatctaaattgattaagacatatgttagtacatgtgtgtgtgtttattgcaactacgagtaaaatttaatatgttatagcaagttatcgctctatcttttttgggttacgatatgttattatgttgatatgcttattgtctatggcagaattgtgcctgcctttttgttccctttcatgttggcttgttgatccatgcaataaaagtagttgaagtaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="7975" stop="9125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8275" g_stop="8821" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="548" r_length="548" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="551" polyA_stop="563"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E711449" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E711449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8275" e_stop="8821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTATTCTCAAATTCTATTACACATATAGTCCTCTATCATG-TCCACATTTAGCAACAAAATGGAACTTATACTCATGTTATTATGTACGTTGATTGTTACGTTGATGATTCAAGGATGTTGTCATGAGGTGATAAAAGGGCCAATTATTAGGCCTCATGGTCTAAGTTTACGCGAATTTGGTTACGATGAATCAACATTGGAGTATTACAAAAGAAGGGCAATGTTGTTAGATGTAGGAACCATGAGGGTTGCTCCACAAGGACCAGATGCTCAACATCACTCGCAATCACCAACAATGTCATAAGACACGAGGATGAATAAAATAGTGTGTATCTAAATTGATTAAGACATATGTTAGTACATGTGTGTGTGTTTATTGCAACTACGAGTAAAATTTAATATGTTATAGCAAGTTATCGCTCTATCTTTTTTGGGTTACGATATGTTATTATGTTGATATGCTTATTGTCTATGGCAGAATTGTGCCTGCCTTTTTGTTCCCTTTCATGTTGGCTTGTTGATCCATGCAATAAAAGTAGTTGAA</genome_strand>
        <mrna_strand>ATTTTATTCTCAAATTCTATTACACATATAGTCCTCTATCATGCTCCACATTTAGCAACAAAATGGAACTTATACTCATGTTATTATGTACGTTGATTGTTACGTTGATGATTCAAGGATGTTGTCATGAGGTGATAAAAGGGCCAATTATTAGGCCTCATGGTCTAAGTTTACGCGAATTTGGTTACGATGAATCAACATTGGAGTATTACAAAAGAAGGGCAATGTTGTTAGATGTAGGAACCATGAGGGTTGCTCCACAAGGACCAGATGCTCAACATCACTCGCAATCACCAACAATGTCATAAGACACGAGGATGAATAAAATAGTGTGTATCTAAATTGATTAAGACATATGTTAGTACATGTGTGTGTGTTTATTGCAACTACGAGTAAAATTTAATATGTTATAGCAAGTTATCGCTCTATCTTTTTTGGGTTACGATATGTTATTATGTTGATATGCTTATTGTCTATGGCAGAATTGTGCCTGCCTTTTTGTTCCCTTTCATGTTGGCTTGTTGATCCATGCAATAAAAGTAGTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420882" ref_strand="+" ref_description="SGN-E420882 [STM-31-L20]">
      <seq>tctcaattgcttttcctctttttccccgaaaaaaataaaatctccaatctcactccccaaatacacaaaatcctcaaaatttagttttcttattttctcaatagatccttcaacttttcgtaatttttgtttttgtctctctgttcgaaaaaaccctagttccctacttcttccattttccctgaaaatatcgattccgatccagctaaggtttccagtttttcctttcaaattcatggggttttagggttttaggaggaaagtttcaattttttggcttttccaatcccagttgttgtgttttgtgtttcgtgtttcgcttgttttagggttagggtttagtttcttcatcccttttggttgttgttgggtagtgattacatgtatggattcagatgcaaacgatttgaattcaagaaataggttgcgttggggcgataattacaaagtttatacccggaagcgccgtagaaccctagagaatactagtactgacgttgctccggccgccacagccaccgttagctctaccgcagctgcaccggaggttacctcgaacagcgggagggatacgaacgagaatgatgaggtgccggagccgtctttgcaaacccaatttcgggattgttcggctcttaaaggtgggacagggggtgagcaagtagctgtgagtaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="11247" stop="12520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11547" g_stop="12220" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E420882" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11547" e_stop="12220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAATTGCTTTTTCCTCTTTTTCCCTGAAAAAGATAAAATCTCCAATCCCACTCCCCAAATTTACAAAATCCTCAAAATTTAATTTTCTTATTTTCTCAATAGATCCTTCAACTTTTCGTAATTTTTGTTTTTGTCTCTCTCTTCGGAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTTCGATCCAGCTAAGGTTTTCCAGTTTTTCCTTTCAAATTCAT---G-----GGGTTTTAGGAGGAAAGTTTCGATTTTTTCTGTTTTTTTACAATCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAGGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGATTGTTAAAGGTGTGATAGGGGGTGAGCAAGTAGCTCTGAGTAATG</genome_strand>
        <mrna_strand>TCTCAATTGC-TTTTCCTCTTTTTCCCCGAAAAAAATAAAATCTCCAATCTCACTCCCCAAATACACAAAATCCTCAAAATTTAGTTTTCTTATTTTCTCAATAGATCCTTCAACTTTTCGTAATTTTTGTTTTTGTCTCTCTGTTCGAAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTCCGATCCAGCTAAGG-TTTCCAGTTTTTCCTTTCAAATTCATGGGGTTTTAGGGTTTTAGGAGGAAAGTTTC-AATTTTT-TG-GCTTTTCCAATCCCAGTTGTTGTGTTTTGTGTTTCGTGTTTCGCTTGTTTTAGGGTTAGGGTTTAGTTTCTTCATCCCTTTTGGTTGTTGTTGGGTAGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCACCGTTAGCTCTACCGCAGCTGCACCGGAGGTTACCTCGAACAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGGCTCTTAAAGGTGGGACAGGGGGTGAGCAAGTAGCTGTGAGTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420909" ref_strand="+" ref_description="SGN-E420909 [STM-31-P4]">
      <seq>tctcaattgcttttcctctttttccccgaaaaaaataaaatctccaatctcactccccaaatacacaaaatcctcaaaatttagttttcttattttctcaatagatccttcaacttttcgtaatttttgtttttgtctctctgttcgaaaaaaccctagttccctacttcttccattttccctgaaaatatcgattccgatccagctaaggtttccagtttttcctttcaaattcatggggttttagggttttaggaggaaagtttcaattttttggcttttccaatcccagttgttgtgttttgtgtttcgtgtttcgcttgttttagggttagggtttagtttcttcatcccttttggttgttgttgggtagtgattacatgtatggattcagatgcaaacgatttgaattcaagaaataggttgcgttggggcgataattacaaagtttatacccggaagcgccgtagaaccctagagaatactagtactgacgttgctccggccgccacagccaccgttagctctaccgcagctgcaccggaggttacctcgaacagcgggagggatacgaacgagaatgatgaggtgccggagccgtctttgcaaaccaatttcgggattggtcggctcttaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="11247" stop="12484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11547" g_stop="12184" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E420909" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11547" e_stop="12184"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAATTGCTTTTTCCTCTTTTTCCCTGAAAAAGATAAAATCTCCAATCCCACTCCCCAAATTTACAAAATCCTCAAAATTTAATTTTCTTATTTTCTCAATAGATCCTTCAACTTTTCGTAATTTTTGTTTTTGTCTCTCTCTTCGGAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTTCGATCCAGCTAAGGTTTTCCAGTTTTTCCTTTCAAATTCAT---G-----GGGTTTTAGGAGGAAAGTTTCGATTTTTTCTGTTTTTTTACAATCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAGGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGATTGTTAAAG</genome_strand>
        <mrna_strand>TCTCAATTGC-TTTTCCTCTTTTTCCCCGAAAAAAATAAAATCTCCAATCTCACTCCCCAAATACACAAAATCCTCAAAATTTAGTTTTCTTATTTTCTCAATAGATCCTTCAACTTTTCGTAATTTTTGTTTTTGTCTCTCTGTTCGAAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTCCGATCCAGCTAAGG-TTTCCAGTTTTTCCTTTCAAATTCATGGGGTTTTAGGGTTTTAGGAGGAAAGTTTC-AATTTTT-TG-GCTTTTCCAATCCCAGTTGTTGTGTTTTGTGTTTCGTGTTTCGCTTGTTTTAGGGTTAGGGTTTAGTTTCTTCATCCCTTTTGGTTGTTGTTGGGTAGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCACCGTTAGCTCTACCGCAGCTGCACCGGAGGTTACCTCGAACAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAA-CCAATTTCGGGATTGGTCGGCTCTTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E306150" ref_strand="+" ref_description="SGN-E306150 [cLEY-13-N24]">
      <seq>aatttttgtttttgtctctctcttcggaaaaaccctagttccctacttgttccattttccctgaaaatatcgatttcgatccagctaaagttttccagtttttcctttcaaattcatggggttttaggaggaaagtttcgattttttctgtttttttacaatcccagttgttgtgttttgtgcttcgtgtttcgtttgttttaaggttagggtttagttttttcatcccttttggtggttgttgggttgtgattacatgtatggattcagatgcaaacgatttgaattcaagaaataggttgcgttggggcgataatcacaaagtttatacccggaagcgccgtagaaccctagagaatactagtactgacgttgctccggccgccacagccgctgttagctcagccgcagctgcaccggaggttatttcgaatagcgggagggatacgaacgagaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="11369" stop="12430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11669" g_stop="12130" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E306150" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11669" e_stop="12130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTGTTTTTGTCTCTCTCTTCGGAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTTCGATCCAGCTAAGGTTTTCCAGTTTTTCCTTTCAAATTCATGGGGTTTTAGGAGGAAAGTTTCGATTTTTTCTGTTTTTTTACAATCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAGGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATG</genome_strand>
        <mrna_strand>AATTTTTGTTTTTGTCTCTCTCTTCGGAAAAACCCTAGTTCCCTACTTGTTCCATTTTCCCTGAAAATATCGATTTCGATCCAGCTAAAGTTTTCCAGTTTTTCCTTTCAAATTCATGGGGTTTTAGGAGGAAAGTTTCGATTTTTTCTGTTTTTTTACAATCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAAGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E406807" ref_strand="+" ref_description="SGN-E406807 [PPI-5-E9]">
      <seq>tcccagttgttgtgttttgtgtttcgtgtttcgcttgttttaaggttagggtttagtttcttcatcccttttggttgttgttgggtagtgattacatgtatggattcagatgcaaacgatttgaattcaagaaataggttgcgttggggcgataattacaaagtttatacccggaagcgccgtagaaccctagaaatactagtactgacgttgctccggccgccacagccaccgttagctctaccgcagctgcaccggaggttacctcgaacagcgggagggatacgaacgagaatgatganggtgccggagccgtctttgcaaacccaatttcggggattgttcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="11530" stop="12474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11830" g_stop="12176" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E406807" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11830" e_stop="12176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAGGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATGA-GGTGCCGGAGCCGTCTTTGCAAACCCAATTTC-GGGATTGTTCGAT</genome_strand>
        <mrna_strand>TCCCAGTTGTTGTGTTTTGTGTTTCGTGTTTCGCTTGTTTTAAGGTTAGGGTTTAGTTTCTTCATCCCTTTTGGTTGTTGTTGGGTAGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGA-AATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCACCGTTAGCTCTACCGCAGCTGCACCGGAGGTTACCTCGAACAGCGGGAGGGATACGAACGAGAATGATGANGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGGATTGTTCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E584217" ref_strand="+" ref_description="SGN-E584217 [10038]">
      <seq>attacatgtatggattcagatgcaaacgatttgaattcaagaaataggttgcgttggggcgataattacaaagtttatacacggaaacgccgtagaaccctagagaatactagtactgacgttgctccggccgccacagccaccgttagctcagccgcagctgcaccggaggtttcgaacagcgggagggatacgaacgagaatgatgatgtgccggagccgtctttgcaaacccaatttcgggattgttcgactcttaaaggtgggacagggggtgagcaagtagctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="11620" stop="12513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11920" g_stop="12213" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E584217" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>294</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E584217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11920" e_stop="12213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGATTGTTAAAGGTGTGATAGGGGGTGAGCAAGTAGCTCTG</genome_strand>
        <mrna_strand>ATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTACAAAGTTTATACACGGAAACGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCACCGTTAGCTCAGCCGCAGCTGCACCGGAGG---TTTCGAACAGCGGGAGGGATACGAACGAGAATGATGATGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGACTCTTAAAGGTGGGACAGGGGGTGAGCAAGTAGCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E411375" ref_strand="+" ref_description="SGN-E411375 [STM-14-H15]">
      <seq>cggaagtcagccagcaatgcagaatcatagaaatgaaccacaaagtgacaatcttgaaatggagaatgggtatggtaagccggttatttcaagaattaaagatagaattaggattaatttaactggagtgaggtccagcgatgagattagagagctcggtatgagcctagagagtgagcttgatcaagttaggggcttggtaaagcagcttgaagctaaacagcttcagctgacaacatataggactaatataaatggtggtaatattaatgctggtagtgttactactttccctggtagtattactactgtccctggtggttctattagctcttacagtcatccacagtatatggatgatggtgtgatcaagaataggtctttagcgcaatcacctaggacatgacaagctcttgatgaaattttgattatgaatgcattggagcaggcgcctgttcaaacactcgtgtgaaagacgtcttgtggctcttgcatgataagtttctttcaagaactttcaagtatgggaggaagttctagtgattctgggagcatgttagctgttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12120" stop="17638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12420" g_stop="12821" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="14471" i_length="1650">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14472" g_stop="14502" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="418" r_length="31" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17185" g_stop="17338" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="568" r_length="150" r_score="0.890"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E411375" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.033" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E411375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12420" e_stop="12821"/>
          <exon e_start="14472" e_stop="14502"/>
          <exon e_start="17185" e_stop="17338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAGTCAGCCAGCAATGCAGAATCATAGAGATGAACCACAAAGTGACAATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTCAAGATAGAATTAGGATTAATTTAACTGGAGTGAGGTCCAGTGATGAGATTAGAGAGCTCGGTATGAGCTTAGAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAGCTGACAACATATAGGACTAGTATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACTTTCCCTGGTAGTATTAATGCTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATACACAGTATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGCGCGAATGAATTCAGAGGTGCGTTCTGCTGGGCACATTGGATCAAGACCATTCCAGCGACCTAATTTTCTGATTGTGGAAAACAGCAATGGTTCTAGTGACTTTGTGGAGAAGGAGAAGAGGACCCCAAAGGCTAATCAGTTTTACAGGAATTCCGAGTTCCTCCTTGGTAAGGATAGACTGCCTCCTGAAAGCAATAAAAGACTGAAGACTAATGGCTCTGGGAAGAAGCACAGTGCCAATTCAGAGAATGGCTTTGGGCTTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAAC-TTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGC</genome_strand>
        <mrna_strand>CGGAAGTCAGCCAGCAATGCAGAATCATAGAAATGAACCACAAAGTGACAATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTAAAGATAGAATTAGGATTAATTTAACTGGAGTGAGGTCCAGCGATGAGATTAGAGAGCTCGGTATGAGCCTAGAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAGCTGACAACATATAGGACTAATATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACTTT-CC--------------CTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATCCACAGTATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCACCTAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTTGATTATGAATGCATTGGAGCAGGCGCCTGTTCAAACACTCGTGTGAAAGACGTCTTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTTCAAGTATGGGAGGAAGT----T-CTAGTGATTCTGGGAGCATGTTAGCTGTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E468560" ref_strand="+" ref_description="SGN-E468560 [cSTB-5-M13]">
      <seq>cggaagtcagccagcaatgcagaatcatagaaatgaaccacaaagtgacaatcttgaaatggagaatgggtatggtaagccggttatttcaagaattaaagatagaattaggattaatttaactggagtgaggtccagcgatgagattagagagctcggtatgagcctagagagtgagcttgatcaagttaggggcttggtaaagcagcttgaagctaaacagcttcagctgacaacatataggactaatataaatggtggtaatattaatgctggtagtgttactactttccctggtagtattactactgtccctggtggttctattagctcttacagtcatccacagtatatggatgatggtgtgatcaagaataggtctttagcgcaatcacctaggacatgacaagctcttgatgaaattttgattatgaatgcattggagcaggcgcctgttcaaacactcgtgtgaaagacgtcttgtggctcttgcatgataagtttctttcaagaactttcaagtatgggaggaagttctagtgattctgggagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12120" stop="17600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12420" g_stop="12821" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="14471" i_length="1650">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14472" g_stop="14502" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="418" r_length="31" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17185" g_stop="17324" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="554" r_length="136" r_score="0.879"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E468560" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.034" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E468560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12420" e_stop="12821"/>
          <exon e_start="14472" e_stop="14502"/>
          <exon e_start="17185" e_stop="17324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAGTCAGCCAGCAATGCAGAATCATAGAGATGAACCACAAAGTGACAATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTCAAGATAGAATTAGGATTAATTTAACTGGAGTGAGGTCCAGTGATGAGATTAGAGAGCTCGGTATGAGCTTAGAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAGCTGACAACATATAGGACTAGTATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACTTTCCCTGGTAGTATTAATGCTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATACACAGTATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGCGCGAATGAATTCAGAGGTGCGTTCTGCTGGGCACATTGGATCAAGACCATTCCAGCGACCTAATTTTCTGATTGTGGAAAACAGCAATGGTTCTAGTGACTTTGTGGAGAAGGAGAAGAGGACCCCAAAGGCTAATCAGTTTTACAGGAATTCCGAGTTCCTCCTTGGTAAGGATAGACTGCCTCCTGAAAGCAATAAAAGACTGAAGACTAATGGCTCTGGGAAGAAGCACAGTGCCAATTCAGAGAATGGCTTTGGGCTTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAAC-TTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCA</genome_strand>
        <mrna_strand>CGGAAGTCAGCCAGCAATGCAGAATCATAGAAATGAACCACAAAGTGACAATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTAAAGATAGAATTAGGATTAATTTAACTGGAGTGAGGTCCAGCGATGAGATTAGAGAGCTCGGTATGAGCCTAGAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAGCTGACAACATATAGGACTAATATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACTTT-CC--------------CTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATCCACAGTATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCACCTAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTTGATTATGAATGCATTGGAGCAGGCGCCTGTTCAAACACTCGTGTGAAAGACGTCTTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTTCAAGTATGGGAGGAAGT----T-CTAGTGATTCTGGGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E577981" ref_strand="+" ref_description="SGN-E577981 [LE08CD02]">
      <seq>ttgataagcacagacttcaggtttttaggaattgtagcagcttgcttcagaggttaatgaaacacaagcatggttgggtgtttaatgagccagtgaacgtgaaatctcttgggctacatgattatcatgacatcattaagcatcctatggatttgggcaccattaagactaggttatctgatgattggtacaagtctccaatggaatttgcggaggatgtacgactcgtctttcgtaatgccatgacttataatcctagagggcaagatgtacatgttatggctgaacagttatcagagatcttcgaagagagatgggcagttatagaggctgagtaccattcagattggaggtaccaaatgtatcatgatgttggtgctcccactcccacctcaagaatgacctcttatcctcctccttttctccacaccccagtgtcttctcgttctcttgctccacatgcccgtcaactgcatccgttggatagatctgagtcaatgactaggccggttaatcccaagatgaagacttcaaatatagctcatgttactaggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgatgcaattgttcagattattaagaagaggaacaccgcacttagtcaagacaacgatgagattgaagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12782" stop="14116"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13082" g_stop="13816" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E577981" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13082" e_stop="13816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAG</genome_strand>
        <mrna_strand>TTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATTATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E389742" ref_strand="+" ref_description="SGN-E389742 [TUS-4-C15]">
      <seq>aagtctccaatggaatttgcggaggatgtacgactcgtctttcgtaatgccatgacttataatcctagagggcaagatgtacatgttatggctgaacagttatcagagatcttcgaagagagatgggcagttatagaggctgagtaccattcagattggaggtaccaaatgtatcatgatgttggtgctcccactcccacctcaagaatgacctcttatcctcctccttttctccacaccccagtgtcttctcgttctcttgctccacatgcccgtcaactgcatccgttggatagatctgagtcaatgactaggccggttaatcccaagatgaagacttcaaatatagctcatgttactaggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgatgcaattgttcagataattaagaagaggaacaccgcacttagtcaagacaacgatgagattgaagtagatatagatagtgttgatgcagaaacactctgggagcttgatagatttgtaacaaatttncaaaagagttttagcaagtataagagaaaagctgaacttcttcgagccagggaaggagctgctcnagctgctcngaatgtgaacccctacatcatggttgctgatgcactgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12973" stop="14394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13273" g_stop="13956" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106">
            <donor d_prob="0.979" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14063" g_stop="14094" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="716" r_length="32" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E389742" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E389742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13273" e_stop="13956"/>
          <exon e_start="14063" e_stop="14094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAA-CCCTACATCAATGGTTGCTGATGCACTGAA</genome_strand>
        <mrna_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTNCAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCNAGCTGCTCNGAATGTG..........................................................................................................AACCCCTACATC-ATGGTTGCTGATGCACTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E550296" ref_strand="+" ref_description="SGN-E550296 [TUS-5-C27]">
      <seq>aagtctccaatggaatttgcggaggatgtacgactcgtctttcgtaatgccatgacttataatcctagagggcaagatgtacatgttatggctgaacagttatcagagatcttcgaagagagatgggcagttatagaggctgagtaccattcagattggaggtaccaaatgtatcatgatgttggtgctcccactcccacctcaagaatgacctcttatcctcctccttttctccacaccccagtgtcttctcgttctcttgctccacatgcccgtcaactgcatccgttggatagatctgagtcaatgactaggccggttaatcccaagatgaagacttcaaatatagctcatgttactaggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgatgcaattgttcagataattaagaagaggaacaccgcacttagtcaagacaacgatgagattgaagtagatatagatagtgttgatgcagaaacactctgggagcttgatagatttgtaacaaatttcaaaaagagttttagcaagtataagagaaaagctgaacttcttcgagccaggggaggagctgctcaggctgctcngaatgtgaacccctacatcatggttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12973" stop="14256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13273" g_stop="13956" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106">
            <donor d_prob="0.979" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14063" g_stop="14084" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="706" r_length="22" r_score="0.864"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E550296" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13273" e_stop="13956"/>
          <exon e_start="14063" e_stop="14084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAA-CCCTACATCAATGGTTGCTG</genome_strand>
        <mrna_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGGAGGAGCTGCTCAGGCTGCTCNGAATGTG..........................................................................................................AACCCCTACATC-ATGGTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E209538" ref_strand="+" ref_description="SGN-E209538 [cLEC-54-N9]">
      <seq>aagtctccaatggaatttgcggaggatgtacgactcgtctttcgtaatgccatgacttataatcctagagggcaagatgtacatgttatggctgaacagttatcagagatcttcgaagagagatgggcagttatagaggctgagtaccattcagattggaggtaccaaatgtatcatgatgttggtgctcccactcccacctcaagaatgacctcttatcctcctccttttctccacaccccagtgtcttctcgttctcttgctccacatgcccgtcaactgcatccgttggatagatctgagtcaatgactaggccggttaatcccaagatgaagacttcaaatatagctcatgttactaggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="12973" stop="14049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13273" g_stop="13749" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E209538" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13273" e_stop="13749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGAT</genome_strand>
        <mrna_strand>AAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E708362" ref_strand="+" ref_description="SGN-E708362 [FA35CC04]">
      <seq>cgttctcttgctccacatgcccgtcaactgcatccgttggatagatctgagtcaatgactaggccggttaatcccaagatgaagacttcaaatatagctcatgttactaggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgatgcaattgttcagataattaagaagaggaacaccgcacttagtcaagacaacgatgagattgaagtagatatagatagtgttgatgcagaaacactctgggagcttgatagatttgtaacaaatttcaaaaagagttttagcaagtataagagaaaagctgaacttcttcgagccagggaaggagctgctcaggctgctcgaaatgtgaaccctacatcaatggttgctgatgcactgaaagaaaatggaactggtgaaaaagatacagctcctgctacccttgaaggtggaagaccggcggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcagcatctggatcagaggcggcgcaatcacccaggacatgacaagctcttgatgaaatttggattatgaatgcatcagagcagacggctgttcaaacactcatctgaaagacgtcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13225" stop="17715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13525" g_stop="13956" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14063" g_stop="14108" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="478" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14204" g_stop="14308" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="583" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="657" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17185" g_stop="17415" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="888" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E708362" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>888</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13525" e_stop="13956"/>
          <exon e_start="14063" e_stop="14108"/>
          <exon e_start="14204" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTG</genome_strand>
        <mrna_strand>CGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTG..........................................................................................................AACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTG...............................................................................................GTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E211329" ref_strand="+" ref_description="SGN-E211329 [cLEC-70-B22]">
      <seq>ggacaccagttcctaagaaaccgaaggcaaaagatctcaataagagagacatgacgtatgaggaaaagcagaagcttagcactaatcttcagaatttaccttcagaaaagcttgatgcaattgttcagataattaagaagaggaacaccgcacttagtcaagacaacgatgagattgaagtagatatagatagtgttgatgcagaaacactctgggagcttgatagatttgtaacaaatttcaaaaagagttttagcaagtataagagaaaagctgaacttcttcgagccagggaaggagctgctcaggctgctcgaaatgtgaaccctacatcaatggttgctgatgcactgaaagaaaatggaactggtgaaaaagatacagctcctgctacccttgaaggtggaagaccggcggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcagcatctggatcagaggcggcgcaatcacccaggacatgacaagctcttgatgaaatttggattatgaatgcatcagagcagacggctgttcaaacactcatctgaaagacgtcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13334" stop="17686"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13634" g_stop="13956" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14063" g_stop="14108" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="369" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14204" g_stop="14308" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="474" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="548" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17185" g_stop="17386" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="750" r_length="202" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E211329" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13634" e_stop="13956"/>
          <exon e_start="14063" e_stop="14108"/>
          <exon e_start="14204" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATAC</genome_strand>
        <mrna_strand>GGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTG..........................................................................................................AACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTG...............................................................................................GTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E555756" ref_strand="+" ref_description="SGN-E555756 [cTSD-1-F1]">
      <seq>ctgaacttcttcgagccagggaaggagctgctcaggctgctcgaaatgtgaaccctacatcaatggttgctgatgcactgaaagaaaatggaactggtgaaaaagatacagctcctgctacccttgaaggtggaagaccggcggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcagcatctggatcagaggcggcgcaatcacccaggacatgacaagctcttgatgaaatttggattatgaatgcatcagagcagacggctgttcaaacactcatctgaaagacgtcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactgtgagggtatttaacacctgtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttctcaatttaggaaaggtgttgatctcgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13607" stop="17973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13907" g_stop="13956" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14063" g_stop="14108" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="96" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14204" g_stop="14308" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="201" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="275" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17185" g_stop="17673" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="764" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E555756" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13907" e_stop="13956"/>
          <exon e_start="14063" e_stop="14108"/>
          <exon e_start="14204" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTGGTGAGCTTTGTTCCTTCATGCATCCTTCTCTTATTCCCCACCCACCCCCAGTAGTCATTGTGTGTTGTCTGGTTGAGATTCTTAATGTGTGAAAATTACATTGCAGAACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTT</genome_strand>
        <mrna_strand>CTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTG..........................................................................................................AACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTG...............................................................................................GTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420910" ref_strand="-" ref_description="SGN-E420910 [STM-31-P4]">
      <seq>aagaaaatggaactgggaaaaagatacaactcctgctacccttgaaggtggaagaccggcggatagtgcaagtagcagctcaagtagttccagncagtgattcaggctcatcctctagtgattctgatagtgatagttcttcggcatctggatcagaggcggcgcaatcacntaggacatgacaagctcttgatgaaattttgattatgaatgcattggagcaggcgcctgttcaaacactcgtgtgaaagacgtcttgtggctcttgcatgataagtttctttcaagaactttcaagtatgggaggaagttctagtgattctgggagcatgttagctgttggctctcacattcttctcgtcataggtggttatggtggtagtgtgagatatttaacacctgtttgttgaattaaaatcttgtgctgaaaaaatctattttttcagtatcattgtcaacaatttggcaggatcatgcaaggtcctgcagctgtaacctgggtgtacaaagagcataataggctgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcaggaatttaattggaaataacagtagggtgtacatattttctcaattcttgtctggcggcaagttattaacttagcatcgatgggagatttttctcgatgtatttctgtgttttgagctcatataaacgcactgttggcttgctgcgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13896" stop="18017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14094" g_stop="14108" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95">
            <donor d_prob="0.766" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14204" g_stop="14308" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="120" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="194" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17185" g_stop="17359" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="364" r_length="170" r_score="0.891"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17360" i_stop="17392" i_length="33">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17393" g_stop="17696" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="648" r_length="284" r_score="0.878"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="727" polyA_stop="736"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E420910" ref_strand="-">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420910" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14094" e_stop="14108"/>
          <exon e_start="14204" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17359"/>
          <exon e_start="17393" e_stop="17696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAAATGGAACTGGTAAGTGTCTCATAGGAGGAATTGTTGCCTCGGATAGGTTTCAAAGATGCATTGGGTGAAAAATACTTATTGTTCTTGCTGTCATGTATGAGTAGGTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAG-CAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAAC-TTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCG</genome_strand>
        <mrna_strand>AAGAAAATGGAACTG...............................................................................................G-GAAAAAGATACAACTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGNCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCGGCATCTGGATCAGAGGCGGCGCAATCACNTAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTTGATTATGAATGCATTGGAGCAGGCGCCTGTTCAAACACTCGTGTGAAAGACGTCTTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTTCAAGTATGGGAGGAAGT----T-CTAGTGATTCTGGGAGCATGTTAGCTGTTGGCTCTCACATTCTTCTC-GTCAT.................................AGGTGGTTATGGTGGTAG---TGTGA-GATATTTAACACCTGTTTGTTGAATTAAAAT-CT-TGTGCTGAAAAAATCTATTTTTTCAGTATCATTGTCAACAATTTGGCA-G-----GA-TCATGCAAGGTCCTGCAGCTGTAACCTGGGTGTACAAAGAGCATAATAGGC---TGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGAATTTAATTGGAAATAACAGT---AGGGTGTACATATTTTCTCAA-TTCTTGTCTGGCGGCAAGTTATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E389479" ref_strand="-" ref_description="SGN-E389479 [TUS-4-C15]">
      <seq>tgaaaaagatacagctcctgctacccttgaaggtggaagaccggcggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcagcatctggatcagaggcggcgcaatcacccaggacatgacaagctcttgatgaaatttggattatgaatgcatcagagcagacggctgttcaaacactcatctgaaagacgtcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactgtgagggtatttaacacctgtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttctcaatttcttgtctggcatcataatatgcggcaagttattaactgacgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13905" stop="18016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14205" g_stop="14308" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="178" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17185" g_stop="17716" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="710" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E389479" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E389479" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14205" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCGGCAAGTTATTAACTGACGCA</genome_strand>
        <mrna_strand>TGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCGGCAAGTTATTAACTGACGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E550095" ref_strand="-" ref_description="SGN-E550095 [TUS-5-C27]">
      <seq>ccttgaaggtggaagaccgcgggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcagcatctggatcagaggcggcgcaatcacccaggacatgacaagctcttgatgaaatttggattatgaatgcatcagagcagacggctgttcaaacactcatctgaaagacgtcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactgtgagggtatttaacacctgtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttcgcaatttcttgtctggcatcataatatgcgacaagttataactgacgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13929" stop="18016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14229" g_stop="14308" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="154" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17185" g_stop="17716" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="685" r_length="531" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E550095" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550095" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14229" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCGGCAAGTTATTAACTGACGCA</genome_strand>
        <mrna_strand>CCTTGAAGGTGGAAGACCGCGGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCGCAATTTCTTGTCTGGCATCATAATATGCGACAAGTTA-TAACTGACGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420883" ref_strand="-" ref_description="SGN-E420883 [STM-31-L20]">
      <seq>cggcggatagtgcaagtagcagctcaagtagttccagcagtgattcaggctcatcctctagtgattctgatagtgatagttcttcggcatctggatcagaggcggcgcaatcacctaggacatgacaagctcttgatgaaattttgattatgaatgcattggagcaggcgcctgttcaaacactcgtgtgaaagacgtcttgtggctcttgcatgataagtttctttcaagaactttcaagtatgggaggaagttctagtgattctgggagcatgttagctgttggctctcacattcttctcgtcataggtggttatggtggtagtgtgagatatttaacacctgtttgttgaattaaaatcttgtgctgaaaaaatctattttttcagtatcattgtcaacaatttggcaggatcatgcaaggtcctgcagctgtaacctgggtgtacaaagagcataataggctgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcaggaatttaattggaaataacagtagggtgtacatattttctcaattcttgtctggcggcaagttattaacttagcatcgatgggagatttttctcggatgtatttctgtgttttgagctcatataaacgccactgttggcttgctgcgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="13946" stop="18017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14246" g_stop="14308" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14429" g_stop="14502" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="137" r_length="74" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682">
            <donor d_prob="0.662" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17185" g_stop="17359" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="307" r_length="170" r_score="0.891"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17360" i_stop="17392" i_length="33">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17393" g_stop="17696" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="591" r_length="284" r_score="0.878"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="672" polyA_stop="681"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E420883" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420883" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14246" e_stop="14308"/>
          <exon e_start="14429" e_stop="14502"/>
          <exon e_start="17185" e_stop="17359"/>
          <exon e_start="17393" e_stop="17696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTGGTAATTATGATACACTCCTTCAAGTCTCAATGCTGCACACATAATGATTGTTCATTGTTTGACTAATTTTCAGCAAGTTCTTCTCAGTATCTCTAATTTAATTTGCTACACTATGTGCAGATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGATGTGAGTAAGACTGATTTAGCTAGTGTGCTGATGTTTCTATTGTTGTGCCCCCCCCCCCCCCCCCTTTTTTTGATGAATGTGTACTTATTTTTTCCCCTAGAAGCATCTTTCCTTGTTTTTATTCTCATATATATTTGAAATGTGAAGTTTGGATTCTGTGCCATGTGCTTTTTTGAGTATGCTGTTTGTGTTAAGTTCTCTTGATTGCTGCAGTTGTTAGGTTGATGTTTGATGAAATGGTATGGTTGGGAGAATACTCTTTGGCATTGGTTTGATGGTGTCTGTGATTCCTGTTGTAACTATTTTTGGAAATATGGTTGAGGACTATTACTATGTCTTATATGGTGTTTTGCAAAATTACATATGAGATGAATGGAACAAATAACCACTTGTGTTGATGGAATGTTTTGTTGGACTGGGAGCATGAGATTCATTTTGGTGTAGGAAGTGGAAGTCTTAGAAACTCTTCATTGTGAGGAGGGGCCATTTAAGTCACCGTAGATTAGTTTTAATAGAGTAGCTTGACAATGAATGTTACGACTGCATGAGAACCGTGAAATAGTTTGGGTAGGACAGCTTCTGTGCCTGATAGATGTGGGAGTTGATGTTTTATCCAGTGGTGTAATGAGACAACTTTTCATGACAAGTGGAGAGGGTCTTTTTAGAGTTGCACATTTTCTTTTCTGGTTTCCGACAGCTCTTTAGTGAATGAAGCTGACAGTTTGAAATTTCACTACTTATGGGCTCATATAGCTGATGATTAACACACTTAGTATTAGGCGTCTCAACTTGGGCTCCATTTTCGTGGTTACACAAGTTGTATCAAACTCTGTGAAAAATACCAGCCTAGTTTGAACAAGTTGAGCAACACTTCTTCTCCTTGCATATCTAATATGGTCAACTGCAACCATTGATTTCAAAACTTGACAGTATCTGATATTGGATTTGTTCAATAAGTTTGATCATTGCATTTAATTCAAACAGATTGGTGATATATGTAAAGAGCCAATGCTCATCTACTTTCTTATTAACAAATTAATAAATCGAATTACCAACCGTACAATTTTATTTAGCAATATGATTATTTTACCAGATGAAAACACGTGTCACTTGAAAACCACTCTAACTTTGTGTCTTCTGATCAAGAAAAAAAAAGAGAAATTTGAGAAAGCAGAACAGGAAAATTACAAAGATATTTCTAACTTATTTTGGTTACTTCTGTTCCATTTTTTAGCTACTGTTTCCAGTTTTGTTATGTTAAAAGATGAGTTGTTGTCCTAATATCCTTTAAACCATCAGCAAATCTTGCTTTTTATCACATGAAAACTCTTGGTTCTAAGTTTCTGTTTTATTCCGTTGAGGTGCATTCACTTTTTGGGCCTTCTCTTTACCGAACCACCATGCAGATTAGCCATTTAAGGAGGGCATTTCCATAATCATGGTTATCCGATGCTTCAGTGACTTAGTGAATGTACTTTAGTCTGATCAAGAAATAGATAAAGAAATGTGTTGTGCCCCCCTGTCTAAGAGTGAGGATGGATTTATGCTTTTTCTTGAAGTAACCACAGCTGAAAGGGAATTAGGGTAGAACTGCAGGATTATATTTGGTAGTCTCATTGTACTTTGCCAGAAAATGATAGTATGTGAATAAACTTCCCTTGTTTTGTTGAAAATCTTGTTTTGTATTACACCCAAGGGCATAGCCTAGATGGATAAAGTCATGGGAGACTATGCTTCAAATCACATTAGATGCAAAAGTGCTAAGTGATTTTTTGCCATGTGCTTAAGCCTTATTCAGCAGGAACTACTCGGTCATGAGCAGGTGGTAGGTACCCAGGGGAATAGTCAAGTTGCACACAGATTGGCCAGTCATTAATAGAATTGATCTTGCTTTGTGTTTCTCTTTTACAACCTAGATGTTTGGTTTTGGAACTGTAGTATGTTAAGCTTAATCTACAAGGAAAGTCGATGGATTTCAATTTTCTGTAGAAACCTGCGATGATCTCTTTCCGTCCTTCCGCAAAAAAGAAGGAAGAACAGGGGAAAAATCACTGTATCTACACAATTCTCATTTGTTGTCCATGAGTTGTGTATAATTAGAACAGTGCTTTTTGAAATTTAAAAGGAAGAATATGTCTAATTTACTAGTGTTTCTGCCAGATCCTTCCCAAGGAGAAAAAAAACACTTTTTAGTAGTTTCGGAGAAAGTTCAATATCACTTGATCCGAAAAAAGAAAAGGTTGTATAAGCAGCAGCAGATGCACCCATTTTCTAGCTCTGTTTCCTTAGGTACCGTACGATACTTAGCAGGGCAGAATTGCAGCAAGTTTCCCCTCCCTAGAACTAGGAACTACTGTTGTTTTCCTTTATATCCTCTATCCACTCTGTTATTGTGGCTCCCCGGTTTTTTCATGCACCTAGGGACACCATGTTATAGTGGAAAGAAGGAGAAGATAAGTTGTGTTACCCTTTTTTTTTGCTTGTAATGCTTTTTTCCCCTTTGAATTTGTCTCTGAAACTGTGGCGGAGTAATTATGTGAAACGAAGAACTTGGTTGAGGAACTTTCATTGACTACTACTTGATGCTCTGTATATTCTATGTTTCTTTGCCTTATATTTTAAAATGTTTCTTGCCTATCATGAGGAAGCGTTGTGTAAATCTGTCTCTTATAATTATTGCAGGAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAAC-TTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCG</genome_strand>
        <mrna_strand>CGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG........................................................................................................................ATTCTGATAGTGATAGTTCTTCGGCATCTGGATCAGAGGCGGCGCAATCACCTAGGACATGACAAGCTCTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTTGATTATGAATGCATTGGAGCAGGCGCCTGTTCAAACACTCGTGTGAAAGACGTCTTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTTCAAGTATGGGAGGAAGT----T-CTAGTGATTCTGGGAGCATGTTAGCTGTTGGCTCTCACATTCTTCTC-GTCAT.................................AGGTGGTTATGGTGGTAG---TGTGA-GATATTTAACACCTGTTTGTTGAATTAAAAT-CT-TGTGCTGAAAAAATCTATTTTTTCAGTATCATTGTCAACAATTTGGCA-G-----GA-TCATGCAAGGTCCTGCAGCTGTAACCTGGGTGTACAAAGAGCATAATAGGCTGAT---GTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGAATTTAATTGGAAATAACAGT---AGGGTGTACATATTTTCTCAA-TTCTTGTCTGGCGGCAAGTTATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E310517" ref_strand="+" ref_description="SGN-E310517 [cLEZ-19-A15]">
      <seq>tcgtgtggctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactgtgagggtatttaacacctgtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="16945" stop="17970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17245" g_stop="17669" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E310517" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17245" e_stop="17669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</genome_strand>
        <mrna_strand>TCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E236679" ref_strand="-" ref_description="SGN-E236679 [cLEL-7-B17]">
      <seq>gctcttgcatataagtttcttcaagaacttcaaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatantacagagggaggtggttatggtggtagtactgtgagggtatttaacacctngtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttctcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="16952" stop="17970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17252" g_stop="17669" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="420" polyA_stop="435"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E236679" ref_strand="-">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236679" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="17252" e_stop="17669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTGCATGATAAGTTTCTTTCAAGAACTTC-AAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATA-TACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCT-GTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</genome_strand>
        <mrna_strand>GCTCTTGCAT-ATAAGTTTC-TTCAAGAACTTCAAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATANTACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTNGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E237071" ref_strand="-" ref_description="SGN-E237071 [cLEL-7-B17]">
      <seq>ctcttgcatgataagtttctttcaagaacttcaagtatgggaggaagtgaagtcctagtgaatttgggagcatgttagctgttggcgctcacattcttctctgtcatatagcttgtcatcgacaagctatatacagagggaggtggttatggtggtagtactgtgagggtatttaacacctgtttgttgaattaaaatattgtgtgctgaaaaaatctatgttttcagtgtcattgtcaacaatttggcaggatcatgattcatgcaaggtcctgcagctgtaacctggatgtacaaagagcataataggctgatgatgtgtattgtttgtttgctttgggagtatttattgcattgtaatatcaccatcagggatttatatggaaataacagtaggagggtgtacatactttctcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="16953" stop="17970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17253" g_stop="17669" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="418" polyA_stop="433"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E237071" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237071" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="17253" e_stop="17669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</genome_strand>
        <mrna_strand>CTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E351693" ref_strand="+" ref_description="SGN-E351693 [cTOS-8-G16]">
      <seq>cttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaattactgcatcgttttgcaattcattaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19099" stop="17493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18799" g_stop="18712" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17793" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="526" r_length="438" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="527" polyA_stop="540"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E351693" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18799" e_stop="18712"/>
          <exon e_start="18230" e_stop="17793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</genome_strand>
        <mrna_strand>CTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E732258" ref_strand="+" ref_description="SGN-E732258 [LB01CG07]">
      <seq>ggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaattactgcatcgttttgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19466" stop="17501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19166" g_stop="19074" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="211" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18230" g_stop="17805" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="637" r_length="426" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="640" polyA_stop="656"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E732258" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19166" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTT</genome_strand>
        <mrna_strand>GGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E351357" ref_strand="+" ref_description="SGN-E351357 [cTOS-12-A8]">
      <seq>aatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19129" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="124" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17808" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="547" r_length="423" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E351357" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGT</genome_strand>
        <mrna_strand>CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E349218" ref_strand="+" ref_description="SGN-E349218 [cTOS-2-O20]">
      <seq>tagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18496" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18196" g_stop="17809" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E349218" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18196" e_stop="17809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCG</genome_strand>
        <mrna_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E354412" ref_strand="+" ref_description="SGN-E354412 [cTOS-17-M16]">
      <seq>tagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18496" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18196" g_stop="17809" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E354412" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18196" e_stop="17809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCG</genome_strand>
        <mrna_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E357302" ref_strand="+" ref_description="SGN-E357302 [cTOS-23-A4]">
      <seq>tagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18496" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18196" g_stop="17809" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E357302" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18196" e_stop="17809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCG</genome_strand>
        <mrna_strand>TAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E354432" ref_strand="+" ref_description="SGN-E354432 [cTOS-17-H13]">
      <seq>ttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19098" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18798" g_stop="18712" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17811" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="507" r_length="420" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E354432" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18798" e_stop="18712"/>
          <exon e_start="18230" e_stop="17811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCAT</genome_strand>
        <mrna_strand>TTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E353641" ref_strand="+" ref_description="SGN-E353641 [cTOS-10-I4]">
      <seq>tgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19052" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18752" g_stop="18712" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17812" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="460" r_length="419" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E353641" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18752" e_stop="18712"/>
          <exon e_start="18230" e_stop="17812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCA</genome_strand>
        <mrna_strand>TGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E353397" ref_strand="+" ref_description="SGN-E353397 [cTOS-15-L11]">
      <seq>tgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaattactgcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19060" stop="17512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18760" g_stop="18712" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17813" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="467" r_length="418" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="468" polyA_stop="485"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E353397" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18760" e_stop="18712"/>
          <exon e_start="18230" e_stop="17813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGC</genome_strand>
        <mrna_strand>TGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E353477" ref_strand="+" ref_description="SGN-E353477 [cTOS-15-M11]">
      <seq>tgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaattactgcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19060" stop="17512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18760" g_stop="18712" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17813" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="467" r_length="418" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="468" polyA_stop="485"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E353477" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18760" e_stop="18712"/>
          <exon e_start="18230" e_stop="17813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGC</genome_strand>
        <mrna_strand>TGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E624166" ref_strand="+" ref_description="SGN-E624166 [GI|21388545]">
      <seq>ggcacgaggccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgttaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtccttgggttgggtccacttaacgagtatgagaagcaaggacttgaggctctgaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagagaactaaaaacaaaattatggtgtagttttctagagtgacagttttggatccttttgtgcaattgtgttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatatatacccaacatttttacaaaataatgtatggcaaactggcgtctatgtcatttgccttagtgtggaggtgttattctcacatggatcgttttccaattatggttagaaagaaacagacaattgatttgaaatgaagaatgttcatgaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="17553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20840" g_stop="20586" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="428" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="597" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="659" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="781" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="899" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="900" r_stop="1306" r_length="407" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1309" polyA_stop="1359"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E624166" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>1310</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20840" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAG-TAG---CAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GGCACGA-GGCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTTACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTTGGGTTGGGTCCACTTAACGAGTATGAGAAGCAAGGACTTGAGGCTCTGAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAGAACT--AAAAACAAAATTATGGTGTAGTTTTCTAGAGTGACAGTTTTGGATCCTTTTGTG-CAATTG-TGTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATA-TATACCCAACATTTTTACAAAATAATGTATGGCAAACT-GGCGTCTATGTCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGGATCGTTTTCCAATTATGGTTAGAAAGAAACAGACAATTGATTTGAAATGAAG-AATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E624165" ref_strand="+" ref_description="SGN-E624165 [GI|21388547]">
      <seq>ggcacgaggccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgttaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtccttgggttgggtccacttaacgagtatgagaagcaaggacttgaggctctgaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagagaactaaaaacaaaattatggtgtagttttctagagtgacagttttggatccttttgtgcaattgtgttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatatatacccaacatttctacaaaataatgtatggcaaactggcgtctatgtcatttgccttagtgtggaggtgttattctcacatggatcgttttccaattatggttagaaagaaacagacaattgatttgaaatgaagaatgttcatgaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="17553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20840" g_stop="20586" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="428" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="597" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="659" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="781" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="899" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="900" r_stop="1306" r_length="407" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1309" polyA_stop="1359"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E624165" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>1310</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20840" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAG-TAG---CAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GGCACGA-GGCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTTACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTTGGGTTGGGTCCACTTAACGAGTATGAGAAGCAAGGACTTGAGGCTCTGAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAGAACT--AAAAACAAAATTATGGTGTAGTTTTCTAGAGTGACAGTTTTGGATCCTTTTGTG-CAATTG-TGTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATA-TATACCCAACATTTCTACAAAATAATGTATGGCAAACT-GGCGTCTATGTCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGGATCGTTTTCCAATTATGGTTAGAAAGAAACAGACAATTGATTTGAAATGAAG-AATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E552010" ref_strand="+" ref_description="SGN-E552010 [cTSB-2-I6]">
      <seq>gaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcnaaatgaagaaatgttcatgacccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19961" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19661" g_stop="19558" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="166" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="288" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="406" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="816" r_length="410" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="817" polyA_stop="834"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E552010" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552010" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19661" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCNAAATGAAGAAATGTTCATGACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E267881" ref_strand="-" ref_description="SGN-E267881 [cLEI-12-D19]">
      <seq>aaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagtttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19408" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19108" g_stop="19074" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="153" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="562" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="585"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E267881" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267881" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19108" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>AAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAG-TTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E217002" ref_strand="-" ref_description="SGN-E217002 [cLEL-1-D15]">
      <seq>tgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19072" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18772" g_stop="18712" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="471" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="472" polyA_stop="489"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E217002" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217002" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18772" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>TGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E220922" ref_strand="-" ref_description="SGN-E220922 [cLEL-22-C7]">
      <seq>tgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19066" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18766" g_stop="18712" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17821" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="465" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="466" polyA_stop="483"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E220922" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220922" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18766" e_stop="18712"/>
          <exon e_start="18230" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>TGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E350848" ref_strand="+" ref_description="SGN-E350848 [cTOS-7-M9]">
      <seq>gaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18506" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18206" g_stop="17821" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="387" polyA_stop="401"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E350848" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18206" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E352376" ref_strand="+" ref_description="SGN-E352376 [cTOS-9-D5]">
      <seq>gaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18506" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18206" g_stop="17821" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="387" polyA_stop="401"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E352376" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18206" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E352582" ref_strand="+" ref_description="SGN-E352582 [cTOS-9-D6]">
      <seq>gaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatgaccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18506" stop="17520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18206" g_stop="17821" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="387" polyA_stop="401"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E352582" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18206" e_stop="17821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</genome_strand>
        <mrna_strand>GAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E238662" ref_strand="-" ref_description="SGN-E238662 [cLEL-9-L93]">
      <seq>atgtgcttttgtgcagtccaatgtcaccgagcttcccttcttggcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaccgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttcctagcagacaattgatgcgaaatgaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19063" stop="17533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18763" g_stop="18712" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17822" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="461" r_length="409" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E238662" ref_strand="-">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238662" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18763" e_stop="18712"/>
          <exon e_start="18230" e_stop="17822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACC</genome_strand>
        <mrna_strand>ATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTGGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTACCGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTCCTAGCAGACAATTGATGCGAAATGAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E239178" ref_strand="+" ref_description="SGN-E239178 [cLEL-9-L93]">
      <seq>tttttttttttttttttcattttgcatcaattgtctgctactaaccataattggaaaacgattcatgtgagaataacacctccacactaaggcaaatgggataggcccccagtttgccatacattattttgtagaaatgttgggtataatatcaaaagagctaaatctaagcctccggctgcaagaaacttgcaaaggatacaaaaacaattgacccaaaaagatccaaaactgtcactatagaaaactagacatnatgtttggttttttagatctctttggcaaacttgattcccttttcaatggaggagagcagctctggcttaagagcctcaagtccttgttttgttagtcgttaagtggacccaaccctaggacttcctccactccatttttccaaagtcttacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="17533" stop="18532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17822" g_stop="18232" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E239178" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17822" e_stop="18232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCATGAACATTTCTTCATTTTGCATCAATTGTCTGCTACTAACCATAATTGGAAAACGATTCATGTGAGAATAACACCTCCACACTAAGGCAAATGGGATAGGCCCCCAGTTTGCCATACATTATTTTGTAGAAATGTTGGGTATAATATCAAAAGAGCTAAATCTAAGCCTCCGGCTGCAAGAAACTTGCAAAGGATACAAAAACAATTGACCCAAAAAGATCCAAAACTGTCACTATAGAAAACTAGACCATAAT-TTTGTTTTTTTAGTTTTCTTTGGCAAACTTGATTCCCTTTTCAATGGAGGAGAGCAGCTCTGGCTTAAGAGCCTCAAGTCCTTGCTTCTCGTAGTCGTTAAGTGGACCCAACCCTAGGACTTCCTCCACTCCATTTTTCCCAAGTCTTACCT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTCATTTTGCATCAATTGTCTGCTACTAACCATAATTGGAAAACGATTCATGTGAGAATAACACCTCCACACTAAGGCAAATGGGATAGGCCCCCAGTTTGCCATACATTATTTTGTAGAAATGTTGGGTATAATATCAAAAGAGCTAAATCTAAGCCTCCGGCTGCAAGAAACTTGCAAAGGATACAAAAACAATTGACCCAAAAAGATCCAAAACTGTCACTATAGAAAACTAGA-CATNATGTTTGGTTTTTTAGATCTCTTTGGCAAACTTGATTCCCTTTTCAATGGAGGAGAGCAGCTCTGGCTTAAGAGCCTCAAGTCCTTG-TTTTGTTAGTCGTTAAGTGGACCCAACCCTAGGACTTCCTCCACTCCATTTTTCCAAAGTCTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E352639" ref_strand="+" ref_description="SGN-E352639 [cTOS-11-G1]">
      <seq>ccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaatgaagaaatgttcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19076" stop="17524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18776" g_stop="18712" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17824" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="472" r_length="407" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E352639" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18776" e_stop="18712"/>
          <exon e_start="18230" e_stop="17824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGA</genome_strand>
        <mrna_strand>CCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E230679" ref_strand="-" ref_description="SGN-E230679 [cLEL-35-G19]">
      <seq>gttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19080" stop="17533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18780" g_stop="18712" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17827" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="473" r_length="404" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E230679" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230679" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18780" e_stop="18712"/>
          <exon e_start="18230" e_stop="17827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCA</genome_strand>
        <mrna_strand>GTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E230609" ref_strand="+" ref_description="SGN-E230609 [cLEL-35-G19]">
      <seq>ttttttttttttttttgggcatcaattgtctgctactaaccataattggaaaacgattcatgtgagaataacacctccacactaaggcaaatgggataggcccccagtttgccatacattattttgtagaaatgttgggtataatatcaaaagagctaaatctaagcctccggctgcaagaaacttgcaaaggatacaaaaacaattgacccaaaaagatccaaaactgtcactatagaaaactagaccataattttgtttttttagttttctttggcaaacttgattcccttttcaatggaggagagcagctctggcttaagagcctcaagtccttgcttctcgtagtcgttaagtggacccaaccctaggacttcctccactccattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="17533" stop="18518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17827" g_stop="18218" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E230609" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17827" e_stop="18218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACATTTCTTCATTTTGCATCAATTGTCTGCTACTAACCATAATTGGAAAACGATTCATGTGAGAATAACACCTCCACACTAAGGCAAATGGGATAGGCCCCCAGTTTGCCATACATTATTTTGTAGAAATGTTGGGTATAATATCAAAAGAGCTAAATCTAAGCCTCCGGCTGCAAGAAACTTGCAAAGGATACAAAAACAATTGACCCAAAAAGATCCAAAACTGTCACTATAGAAAACTAGACCATAATTTTGTTTTTTTAGTTTTCTTTGGCAAACTTGATTCCCTTTTCAATGGAGGAGAGCAGCTCTGGCTTAAGAGCCTCAAGTCCTTGCTTCTCGTAGTCGTTAAGTGGACCCAACCCTAGGACTTCCTCCACTCCATTTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTGGGCATCAATTGTCTGCTACTAACCATAATTGGAAAACGATTCATGTGAGAATAACACCTCCACACTAAGGCAAATGGGATAGGCCCCCAGTTTGCCATACATTATTTTGTAGAAATGTTGGGTATAATATCAAAAGAGCTAAATCTAAGCCTCCGGCTGCAAGAAACTTGCAAAGGATACAAAAACAATTGACCCAAAAAGATCCAAAACTGTCACTATAGAAAACTAGACCATAATTTTGTTTTTTTAGTTTTCTTTGGCAAACTTGATTCCCTTTTCAATGGAGGAGAGCAGCTCTGGCTTAAGAGCCTCAAGTCCTTGCTTCTCGTAGTCGTTAAGTGGACCCAACCCTAGGACTTCCTCCACTCCATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E735031" ref_strand="+" ref_description="SGN-E735031 [LB14BA04]">
      <seq>cgcttgatgtggttagggccaagacattttatgctggaaaagctatagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcgaaatgaagaaatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19916" stop="17529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19617" g_stop="19558" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="122" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="244" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="362" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17829" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="764" r_length="402" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E735031" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19617" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTT</genome_strand>
        <mrna_strand>CGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTATAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCGAAATGAAGAAATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E624167" ref_strand="+" ref_description="SGN-E624167 [GI|21388543]">
      <seq>tcggcacgaggcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgttaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgagtatgagaagcaaggacttgaggctctgaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagagaactaaaaacaaaattattggttgtagttttctagagtgacagttttggatccttttgtgcaattgtgttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatatatacccaacatttctacaaaataatgtatggcaaactggcgtctatgtcatttgccttagtgtggaggtgctattctcacatggatcgttttccaattatggttagaaacagacaattgatttgaaatgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21187" stop="17547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20887" g_stop="20586" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="477" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="646" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="708" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="830" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="831" r_stop="948" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18230" g_stop="17834" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="949" r_stop="1341" r_length="393" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1342" polyA_stop="1356"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E624167" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>1344</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20887" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGC-CGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTA-TGG-TCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAA</genome_strand>
        <mrna_strand>TCGGCACGAGGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTTACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGAGTATGAGAAGCAAGGACTTGAGGCTCTGAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAGAACT--AAAAACAAAATTATTGGTTGTAGTTTTCTAGAGTGACAGTTTTGGATCCTTTTGTG-CAATTG-TGTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATA-TATACCCAACATTTCTACAAAATAATGTATGGCAAACT-GGCGTCTATGTCATTTGCCTTAGTGTGGAGGTGCTATTCTCACATGGATCGTTTTCCAATTATGGTTAGAAACAGACAATTGATTTGAAATGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E733156" ref_strand="+" ref_description="SGN-E733156 [LB04AE05]">
      <seq>cagttgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaatcgttttccaattatggttagtagcagacaattgatgcaaannnnnaannaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19473" stop="17542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19173" g_stop="19074" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="218" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18230" g_stop="17842" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="607" r_length="389" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="617" polyA_stop="637"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E733156" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19173" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAA</genome_strand>
        <mrna_strand>CAGTTGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420411" ref_strand="-" ref_description="SGN-E420411 [STM-31-M19]">
      <seq>cggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgttaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgagtatgagaagcaaggacttgaggctctgaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagagaactaaaaacaaaattatggtgtagttttctagagtgacagttttggatccttttgtgcaattgtgttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatatatacccaacatttctacaaaataatgtatggcaaactggcgtctatgtcatttgccttagtgtggaggtgctattctcacatggatcgttttccaattatggttagaaacagacaattgatttgaaatgccaaaaaagagtgaaaaactcgagggggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19728" stop="17547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19428" g_stop="19379" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="172" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="290" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18230" g_stop="17847" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="668" r_length="378" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E420411" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420411" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19428" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGAT</genome_strand>
        <mrna_strand>CGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTTACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGAGTATGAGAAGCAAGGACTTGAGGCTCTGAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAGAACT--AAAAACAAAATTATGGTGTAGTTTTCTAGAGTGACAGTTTTGGATCCTTTTGTG-CAATTG-TGTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATA-TATACCCAACATTTCTACAAAATAATGTATGGCAAACT-GGCGTCTATGTCATTTGCCTTAGTGTGGAGGTGCTATTCTCACATGGATCGTTTTCCAATTATGGTTAGAAACAGACAATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E624163" ref_strand="+" ref_description="SGN-E624163 [GI|21388551]">
      <seq>ggcacgaggatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttccaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgttaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtccttgggttgggtccacttaacgagtatgagaagcaaggacttgaggctctgaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagagaactaaaaacaaaattatggtgtagttttctagagtgacagttttggatccttttgtgcaattgtgttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatatatacccaacatttctacaaaataatgtatggcaaactggcgtctatgtcatttgccttagtgtggaggtgttattctcacatggatcgttttccaattatggttagaaagaaacagacaattgatttgaaatgaagaatgttcatgaccaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21161" stop="17553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20861" g_stop="20586" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="285" r_length="276" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="459" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="628" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="690" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="812" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="813" r_stop="930" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18230" g_stop="17863" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="931" r_stop="1292" r_length="362" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1337" polyA_stop="1358"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E624163" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>1289</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20861" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTA</genome_strand>
        <mrna_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCCAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTTACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTTGGGTTGGGTCCACTTAACGAGTATGAGAAGCAAGGACTTGAGGCTCTGAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAGAACT--AAAAACAAAATTATGGTGTAGTTTTCTAGAGTGACAGTTTTGGATCCTTTTGTG-CAATTG-TGTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATA-TATACCCAACATTTCTACAAAATAATGTATGGCAAACT-GGCGTCTATGTCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGGATCGTTTTCCAATTATGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E337019" ref_strand="+" ref_description="SGN-E337019 [cTOE-20-N3]">
      <seq>cgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaaatcgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20228" stop="17577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19928" g_stop="19860" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19859" i_stop="19395" i_length="465">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19394" g_stop="19379" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="85" r_length="16" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="207" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="325" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17876" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="681" r_length="356" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E337019" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19928" e_stop="19860"/>
          <exon e_start="19394" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATG-AATCGTTTT</genome_strand>
        <mrna_strand>CGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAAATCGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E308928" ref_strand="+" ref_description="SGN-E308928 [cLEY-23-C1]">
      <seq>tccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19047" stop="17583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18747" g_stop="18712" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17881" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="386" r_length="350" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E308928" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18747" e_stop="18712"/>
          <exon e_start="18230" e_stop="17881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATC</genome_strand>
        <mrna_strand>TCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E716835" ref_strand="+" ref_description="SGN-E716835 [FB18AF10]">
      <seq>gaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccattttgcttagtgtggaggtgttattctcacatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19997" stop="17584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19697" g_stop="19558" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="202" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="324" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="442" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17884" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="789" r_length="347" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E716835" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19697" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</genome_strand>
        <mrna_strand>GAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTTGCTTAGTGTGGAGGTGTTATTCTCACATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E373527" ref_strand="-" ref_description="SGN-E373527 [TUS-31-J18]">
      <seq>aaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttttacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19748" stop="17583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19573" g_stop="19558" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="78" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="200" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="318" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17884" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="665" r_length="347" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E373527" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373527" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19573" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</genome_strand>
        <mrna_strand>AAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTTTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E292054" ref_strand="-" ref_description="SGN-E292054 [cLET-1-A9]">
      <seq>caatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggagcaagtcctacggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactagaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggccaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19129" stop="17583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="125" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17884" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="472" r_length="347" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E292054" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292054" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</genome_strand>
        <mrna_strand>CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGCAAGTCCTACGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAGAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCCAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E354625" ref_strand="+" ref_description="SGN-E354625 [cTOS-17-P3]">
      <seq>ccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaggtgttattctcacatgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18403" stop="17583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18103" g_stop="17884" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="221" polyA_stop="232"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E354625" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>220</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18103" e_stop="17884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</genome_strand>
        <mrna_strand>CCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E262896" ref_strand="+" ref_description="SGN-E262896 [cLEG-59-H15]">
      <seq>tgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggccaactgggggcctatcccatttgccttagtggtgaaaaaaaaaaaaaaaaaaaaaaaaactcgaggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19998" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19698" g_stop="19558" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="203" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="325" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="443" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="17901" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="773" r_length="330" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="774" polyA_stop="797"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E262896" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19698" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>TGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCCAACTGGGGGCCTATCCCATTTGCCTTAGTGGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E292555" ref_strand="+" ref_description="SGN-E292555 [cLET-16-G24]">
      <seq>ctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgtgaaaaatggagaggaggaagtcctagggttgggtccacttaacgactactagaagcaaggacttgaggctcttaagccagaactgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagctttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataaagtatggcaaactgggggcctatcccatttgccttagtgtggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19124" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18824" g_stop="18712" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17901" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="443" r_length="330" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E292555" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18824" e_stop="18712"/>
          <exon e_start="18230" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>CTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGTGAAAAATGGAGAGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACTAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAACTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGCTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAAAGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E735317" ref_strand="+" ref_description="SGN-E735317 [LC01AB05]">
      <seq>gaatgtgcttttgcgctgtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtgaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19065" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18765" g_stop="18712" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17901" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="384" r_length="330" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="385" polyA_stop="404"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E735317" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18765" e_stop="18712"/>
          <exon e_start="18230" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>GAATGTGCTTTTGCGCTGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E296629" ref_strand="+" ref_description="SGN-E296629 [cLET-39-N18]">
      <seq>ttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19057" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18757" g_stop="18712" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17901" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="376" r_length="330" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E296629" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18757" e_stop="18712"/>
          <exon e_start="18230" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>TTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E353570" ref_strand="+" ref_description="SGN-E353570 [cTOS-15-N21]">
      <seq>ggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtggggaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18512" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18212" g_stop="17901" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="313" polyA_stop="323"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E353570" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18212" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>GGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E356807" ref_strand="+" ref_description="SGN-E356807 [cTOS-21-L8]">
      <seq>ggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18512" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18212" g_stop="17901" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="313" polyA_stop="323"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E356807" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18212" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>GGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E227414" ref_strand="-" ref_description="SGN-E227414 [cLEL-30-K14]">
      <seq>agcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaactgggggcctatcccatttgccttagtgtggaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="18466" stop="17602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18166" g_stop="17901" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="267" polyA_stop="286"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E227414" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>266</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227414" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="18166" e_stop="17901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAG</genome_strand>
        <mrna_strand>AGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E352183" ref_strand="+" ref_description="SGN-E352183 [cTOS-13-K2]">
      <seq>ccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttagatttagctcttttgatattatacccaacatttctacaaaataatgtatggcaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19109" stop="17632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18809" g_stop="18712" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18230" g_stop="17932" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="397" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E352183" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18809" e_stop="18712"/>
          <exon e_start="18230" e_stop="17932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACT</genome_strand>
        <mrna_strand>CCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E707518" ref_strand="+" ref_description="SGN-E707518 [FA33BA01]">
      <seq>cccttaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctagttttctatagtgacagttttggatctttttgggtcaattgtttttgtatcctttgcaagtttcttgcagccggaggcttaaatttagctcttttgatattataccccacatttctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20231" stop="17652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19931" g_stop="19836" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="265" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="327" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="449" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="567" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18230" g_stop="17952" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="846" r_length="279" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E707518" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19931" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="17952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTAC</genome_strand>
        <mrna_strand>CCCTTAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAAATTTAGCTCTTTTGATATTATACCCCACATTTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E345520" ref_strand="+" ref_description="SGN-E345520 [cTOF-18-C18]">
      <seq>tgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattantggtctagttttctatagtgacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20029" stop="17752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19844" g_stop="19836" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="178" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="240" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="362" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="480" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18230" g_stop="18052" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="660" r_length="180" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E345520" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19844" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTA-TGGTCTAGTTTTCTATAGTGACAGT</genome_strand>
        <mrna_strand>TGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTANTGGTCTAGTTTTCTATAGTGACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E277517" ref_strand="+" ref_description="SGN-E277517 [cLER-3-J19]">
      <seq>ttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtacacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaaaacaaaattatggtctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19905" stop="17769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19605" g_stop="19558" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="110" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="232" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="350" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18069" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="511" r_length="161" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E277517" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19605" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAG</genome_strand>
        <mrna_strand>TTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ACACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E557901" ref_strand="+" ref_description="SGN-E557901 [16773]">
      <seq>gataagcaanccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgcaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacccaagatggtggcacagaagtcgtggaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggtttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttctttgcatccaaggtgagacttgggaaaaatggagtggaggaagtcctnaggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgagaagggaatcaagttagccaaagagaactaaaaacaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20012" stop="17781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19712" g_stop="19558" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="217" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="339" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="457" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18079" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="607" r_length="150" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E557901" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19712" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAAT</genome_strand>
        <mrna_strand>GATAAGCAANCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGCAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGCACAGAAGTCGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGTTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTTGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTNAGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAGAAGGGAATCAAGTTAGCCAAAGAGAACT--AAAAACAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E293988" ref_strand="+" ref_description="SGN-E293988 [cLET-13-N23]">
      <seq>actgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacnagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19990" stop="17787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19690" g_stop="19558" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="195" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="317" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="435" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18087" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="579" r_length="144" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E293988" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19690" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAA</genome_strand>
        <mrna_strand>ACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACNAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E746689" ref_strand="+" ref_description="SGN-E746689 [GI|52139815]">
      <seq>atgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcatatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaagccaaagctggaaagggttcanccaccctctcaatagcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21140" stop="17790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20840" g_stop="20586" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="429" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="598" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="660" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="782" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="900" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18230" g_stop="18090" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="901" r_stop="1041" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E746689" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1041</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20840" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAA</genome_strand>
        <mrna_strand>ATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCATATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAAGCCAAAGCTGGAAAGGGTTCANCCACCCTCTCAATAGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E315534" ref_strand="+" ref_description="SGN-E315534 [cTOA-22-E15]">
      <seq>ccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaagaaaactaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20229" stop="17790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19929" g_stop="19836" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="263" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="325" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="447" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="565" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18230" g_stop="18090" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="706" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E315534" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19929" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAA</genome_strand>
        <mrna_strand>CCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E294456" ref_strand="+" ref_description="SGN-E294456 [cLET-14-F10]">
      <seq>aaaagaagctctttggagttaccatgcttgatgtggttagggccacgacgattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgcgaaaaatggagtggaggaagtcctagggttgggtccacttaacgactactagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19941" stop="17798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19641" g_stop="19558" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="147" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="269" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="387" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18098" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="520" r_length="133" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E294456" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19641" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGAC-ATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAG</genome_strand>
        <mrna_strand>AAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCACGACGATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGCGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACTAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E294457" ref_strand="+" ref_description="SGN-E294457 [cLET-14-F10]">
      <seq>aaaagaagctctttggagttaccatgcttgatgtggttagggccacgacgattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgcgaaaaatggagtggaggaagtcctagggttgggtccacttaacgactactagaagcaaggacttgaggctcttaagccagagctgctctcctccattgaaaagggaatcaagtttgccaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19941" stop="17798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19641" g_stop="19558" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="147" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="269" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="387" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18098" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="520" r_length="133" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E294457" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19641" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGAC-ATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAG</genome_strand>
        <mrna_strand>AAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCACGACGATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGCGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACTAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E729817" ref_strand="+" ref_description="SGN-E729817 [LA22AG12]">
      <seq>ctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctagggttgggtccacttaacgactacgagaagcaaggacttgaggctcttaagccagagctgctctcctcccattgaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20314" stop="17819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20015" g_stop="19836" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="348" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="410" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="532" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="650" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18230" g_stop="18118" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="764" r_length="114" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E729817" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20015" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCT-CCATTGAAAA</genome_strand>
        <mrna_strand>CTG-AGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCCATTGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E205841" ref_strand="+" ref_description="SGN-E205841 [cLEC-20-M10]">
      <seq>ttttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaggtaagacttgggaaaaatggagtggaggaagtcctanggttgggtccacttaacgactacgagaagcaaggacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19891" stop="17855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19591" g_stop="19558" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="96" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="218" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="336" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18230" g_stop="18155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="412" r_length="76" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E205841" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19591" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTG</genome_strand>
        <mrna_strand>TTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTANGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E318499" ref_strand="+" ref_description="SGN-E318499 [cTOB-10-E15]">
      <seq>gaggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccgagcttcccttcttcgcatccaaagtaagacttgggaaaaatggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20160" stop="17908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19862" g_stop="19836" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="196" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="258" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="380" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="498" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18230" g_stop="18208" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="521" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E318499" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19862" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
          <exon e_start="18230" e_stop="18208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAGGTAATAAGCCTTTTCTTTTCCTACAAAGACACTGGACGTCATGTATACTTTTTTCTTTGAACTGTCTGATTCATTTGGTCATTGCCCTCTTATCATGTGGGTATGAAAAGGTCAAAACAAATTATATAGTTCAAGTTTAGGTTTGTTTAAGCATGTCTGAAGCTGTGTCTATTCTGGATGTGTTGAGGGATAGTTTTGACATCATGAGTCATCGATTGATCTTGATTAAGCATGTCTCATGTGGAATGGTTGGTAGCTTTTCAACAGTGCAAGTCGAATGTGTCAAGAACTAAGTTGACATCCTAGGTTATTATTTGTTGTTAGTCACACACGCATCTGAACGTAAATAGCTCGTTAACTTTGAATCATGGGCTAAATTTGTACTTCCTCTTATCAACTGACTTGTGGGTAATTCACTGTATAAGGTCACTATTTTCATTTTGCTTACTTATACATGTCATTCAATTTGATCGCTTTGCAGGTAAGACTTGGGAAAAATGGAGT</genome_strand>
        <mrna_strand>GAGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACTTGGGAAAAATGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E730274" ref_strand="+" ref_description="SGN-E730274 [LA23CE04]">
      <seq>tccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaacgagctttccctcttcgcatccaaggtaagacttggggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21146" stop="18406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20846" g_stop="20586" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="435" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="604" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="666" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="788" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18712" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="789" r_stop="906" r_length="118" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E730274" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20846" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG</genome_strand>
        <mrna_strand>TCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCAACGAGCTTTCCCTCTTCGCATCCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E378771" ref_strand="+" ref_description="SGN-E378771 [TUS-31-J18]">
      <seq>cttttaccttttcctcatttcttttctatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaaggggtgaatggagttcccngatgtgntgaatgtgcttttgtgcagtccatgtcaccgagcttccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="18425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="466" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="635" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="697" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="819" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18725" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="923" r_length="104" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E378771" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>924</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCC-GATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTT</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTCTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAAGGGGTGAATGGAGTTCCCNGATG-TGNTGAATGTGCTTTTGTGCAGTCC-ATGTCACCGAGCTTCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E707896" ref_strand="+" ref_description="SGN-E707896 [FA34BB02]">
      <seq>cttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgtttgtgaatgtgcttttgtgcagtccaatgtcaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21157" stop="18435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20857" g_stop="20586" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="446" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="615" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="677" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="799" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18735" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="800" r_stop="894" r_length="95" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E707896" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>894</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20857" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCG</genome_strand>
        <mrna_strand>CTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTTGTGAATGTGCTTTTGTGCAGTCCAATGTCACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E208236" ref_strand="+" ref_description="SGN-E208236 [cLEC-37-D19]">
      <seq>gaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgtcaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20227" stop="18435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19927" g_stop="19836" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="261" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="323" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="445" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18735" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="540" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E208236" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19927" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCG</genome_strand>
        <mrna_strand>GAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E707051" ref_strand="+" ref_description="SGN-E707051 [FA31DF12]">
      <seq>ccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctncatggcctatgctggggctatttttgccgatgcttgcttgaaggnngtgaatggagttcccgatgttgttgaatgtgcttttgtgcagtccaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21108" stop="18440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20808" g_stop="20586" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="397" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="566" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="628" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="750" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18740" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="840" r_length="90" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E707051" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20808" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGT</genome_strand>
        <mrna_strand>CCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTNCATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGNNGTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E559908" ref_strand="+" ref_description="SGN-E559908 [19478]">
      <seq>cagatctgaggttgtcggttttgcaggagaagagcaggctagggaaggctctggaagggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgaccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggcattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgcaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagtttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtccaaatgaggaaattgttgcactcaccaaagctgaacccaagatggtggcacagaagtcgtggaggccaatgctggaaagggttcagccaccctctcaatggcctatgctggggctatttttggcgatgcttgcttgcaagggtttgaatggagtcccgatgttgttgaatgtgcttttgtgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20319" stop="18449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="184" r_length="174" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="353" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="416" r_length="63" r_score="0.935"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="541" r_length="125" r_score="0.902"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.963" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18749" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="622" r_length="81" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E559908" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCCGGTTTTGCAGGAGAAGAGCA-GCTAGGGCAGGCACTGGAA-GGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAG-TTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTAT-CAGATGAGGAAATTGTTGCACTCA-CAAAGC-GAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTG-AAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCA</genome_strand>
        <mrna_strand>GTTGTCGGTTTTGCAGGAGAAGAGCAGGCTAGGGAAGGCTCTGGAAGGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGA-CCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGG-CATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGCAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCCAAATGAGGAAATTGTTGCACTCACCAAAGCTGAACCCAAGATGGTGGCACAGAAGTCGTGGAGGCCAATGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGGCGATGCTTGCTTGCAAGGGTTTGAATGGAG-TCCCGATGTTGTTGAATGTGCTTTTGTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E706257" ref_strand="+" ref_description="SGN-E706257 [FA29BH02]">
      <seq>cggtggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgagggggttgaatggagttcccgatgttgttgaatgtgcttttgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21138" stop="18450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20840" g_stop="20586" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="429" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="598" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="660" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="782" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18750" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="862" r_length="80" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E706257" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20840" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGC</genome_strand>
        <mrna_strand>CGGTGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAGGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E308723" ref_strand="+" ref_description="SGN-E308723 [cLEZ-11-I4]">
      <seq>atctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaagtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcatatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaagccaaagctggaaagggttcagccaccctctcaatagcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagttcccgatgttgttgaatgtgcttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20203" stop="18453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19903" g_stop="19836" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="237" r_length="169" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="299" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="421" r_length="122" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18753" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="498" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E308723" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19903" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTG</genome_strand>
        <mrna_strand>ATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAAGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCATATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAAGCCAAAGCTGGAAAGGGTTCAGCCACCCTCTCAATAGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E216527" ref_strand="+" ref_description="SGN-E216527 [cLEL-1-D15]">
      <seq>ggtacctgcatgaaaagaagctctttggagttaccatgcttgttgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggttgaatggagtttccgatgttgttgaatgtgctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="19946" stop="18454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19654" g_stop="19558" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="158" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="280" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18829" g_stop="18754" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="356" r_length="76" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E216527" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19654" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18754"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTT</genome_strand>
        <mrna_strand>GGTACCT-GCATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGTTGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTTCCGATGTTGTTGAATGTGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E729478" ref_strand="+" ref_description="SGN-E729478 [LA21AG06]">
      <seq>attttctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctngggctatttttgccgatgcttgcctgaaggggttgaatggagttcccgatgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21193" stop="18467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20893" g_stop="20586" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="482" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="651" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="713" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="835" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="836" r_stop="898" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E729478" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>898</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20893" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGT</genome_strand>
        <mrna_strand>ATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTNGGGCTATTTTTGCCGATGCTTGCCTGAAGGGGTTGAATGGAGTTCCCGATGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E727325" ref_strand="+" ref_description="SGN-E727325 [LA14BE09]">
      <seq>ctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaagctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgctttgaaaggggtgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21188" stop="18483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20888" g_stop="20586" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="477" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="646" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="708" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="830" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.963" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18783" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="831" r_stop="878" r_length="48" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E727325" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>877</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20888" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGC-TTGAAGGGGTTGAATG</genome_strand>
        <mrna_strand>CTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAAGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTTGAAAGGGGTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E727110" ref_strand="+" ref_description="SGN-E727110 [LA13DA10]">
      <seq>cgtatattccgaaatgaggacctccatgttgaaatccatcccccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaagggggttgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21152" stop="18484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20853" g_stop="20586" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="442" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="611" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="673" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="674" r_stop="795" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18784" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="842" r_length="47" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E727110" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20853" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAA-GGGGTTGAAT</genome_strand>
        <mrna_strand>CGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCCCCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGGTTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E463862" ref_strand="+" ref_description="SGN-E463862 [cPRO-16-O9]">
      <seq>tatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacacaagatggtggcacagaagtcgtggaagccaaggctgcgaatggttcaaccaccctctncatggcctatgctggggctatttttagcgatgcttgcttgaaaggtttgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20250" stop="18484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19950" g_stop="19836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="284" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="346" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="468" r_length="122" r_score="0.893"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.82"/>
            <acceptor a_prob="0.963" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18784" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="514" r_length="46" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E463862" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19950" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAAT</genome_strand>
        <mrna_strand>TATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACACAAGATGGTGGCACAGAAGTCGTGGAAGCCAAGGCTGCGAATGGTTCAACCACCCTCTNCATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTAGCGATGCTTGCTTGAAAGGTTTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E726443" ref_strand="+" ref_description="SGN-E726443 [LA11DC09]">
      <seq>gaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgcttgaaggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21143" stop="18489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20843" g_stop="20586" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="432" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="601" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="663" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="785" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18789" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="786" r_stop="826" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E726443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20843" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGT</genome_strand>
        <mrna_strand>GAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E727535" ref_strand="+" ref_description="SGN-E727535 [LA14DH12]">
      <seq>cttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaaggggtcagccaccctctncatgggctatgctggggctatttttgccgatgcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21170" stop="18498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20870" g_stop="20586" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="459" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="628" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="690" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="812" r_length="122" r_score="0.967"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18798" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="813" r_stop="844" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E727535" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20870" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCT</genome_strand>
        <mrna_strand>CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGGTCAGCCACCCTCTNCATGGG....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E706747" ref_strand="+" ref_description="SGN-E706747 [FA30DC06]">
      <seq>ggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21136" stop="18498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20836" g_stop="20586" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="425" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="594" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="656" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="778" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18798" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="779" r_stop="810" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E706747" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20836" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTGCT</genome_strand>
        <mrna_strand>GGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E248000" ref_strand="+" ref_description="SGN-E248000 [cLEF-47-O19]">
      <seq>tctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgccgatgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20202" stop="18500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19902" g_stop="19836" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="236" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="298" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="420" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18829" g_stop="18800" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="450" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E248000" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19902" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGCTTG</genome_strand>
        <mrna_strand>TCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E729430" ref_strand="+" ref_description="SGN-E729430 [LA21AB09]">
      <seq>attttctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaagctggaaagggttcagccaccctctcaatgggctatgctggggctatttttgccgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21193" stop="18503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20893" g_stop="20586" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="482" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="651" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="713" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="835" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18803" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="836" r_stop="862" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E729430" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20893" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGCCGATGC</genome_strand>
        <mrna_strand>ATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAAGCTGGAAAGGGTTCAGCCACCCTCTCAATGGG....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGCCGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E722852" ref_strand="+" ref_description="SGN-E722852 [FC18CB07]">
      <seq>aatcggccgaattgatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggaaaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagaatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactgaaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaaatactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtgggacagaagttgtagaggccaaggctggaaagggttcagccaccctctcaatggcctatgctggggctatttttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21163" stop="18509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20861" g_stop="20586" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="290" r_length="276" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="464" r_length="174" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="633" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="695" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="817" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18809" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="818" r_stop="838" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E722852" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20861" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTTTGC</genome_strand>
        <mrna_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAAAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGAATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGAAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAATACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E706178" ref_strand="+" ref_description="SGN-E706178 [FA29AH12]">
      <seq>ctgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaatatggtgggacagaagttgtagaggcctcaagctggaaaagggttcaaccaccctctcaatggcctatgctggggctatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21145" stop="18767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20845" g_stop="20586" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="434" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="603" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="665" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="789" r_length="124" r_score="0.934"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.85"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18812" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="790" r_stop="807" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E706178" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20845" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCC-AAGGCTGG-AAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATGCTGGGGCTATTTT</genome_strand>
        <mrna_strand>CTGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAATATGGTGGGACAGAAGTTGTAGAGGCCTCAAGCTGGAAAAGGGTTCAACCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATGCTGGGGCTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E592125" ref_strand="+" ref_description="SGN-E592125 [45852]">
      <seq>cctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagctcaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgcaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacccaagatggtggcacagaagtcgtggaggcccaagctgggaaagggttcagccaccctctcaatggcctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21133" stop="18769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20833" g_stop="20586" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="422" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="591" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="653" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19074" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="776" r_length="123" r_score="0.926"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244">
            <donor d_prob="0.998" d_score="0.88"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18829" g_stop="18825" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="777" r_stop="781" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E592125" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20833" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19074"/>
          <exon e_start="18829" e_stop="18825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCT-GGAAAGGGTTCAGCCACCCTCTCAATGGCGTACGTTTCCACTTCAATGTTTTTCTTGATTTATTTTTTTTTCCTGAAGGATTTTCACTTTGATTGCAAGATTTTGTTTACGAATAAGTTATGGTGCTGCCCAATGTCACGGTCAAATATTTAGGAATGTAGAGAAACAAACAAAAAAAGAAACTTTTTTGACATATACTGCCCCAAACCACTTCATTTACTGGCCTTTCCTGTTTGCATACTCGGTTCTAAGCAGTTAGTTTTACTTGTGCAGCTATG</genome_strand>
        <mrna_strand>CCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTCAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGCAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGCACAGAAGTCGTGGAGGCCCAAGCTGGGAAAGGGTTCAGCCACCCTCTCAATGGC....................................................................................................................................................................................................................................................CTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E461830" ref_strand="+" ref_description="SGN-E461830 [cPRO-9-P23]">
      <seq>aatgaagctcaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggcaggctctggaaggagctgatgtagttatcattcctgctggtgtaccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcaccgccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacccaagatggtgggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20985" stop="18825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20685" g_stop="20586" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="274" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="443" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="505" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19125" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="576" r_length="71" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E461830" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E461830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20685" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGAC</genome_strand>
        <mrna_strand>AATGAAGCTCAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCTCTGGAAGGAGCTGATGTAGTTATCATTCCTGCTGGTGTACCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACCGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E728229" ref_strand="+" ref_description="SGN-E728229 [LA17AE01]">
      <seq>ccgccgtagcttttaccttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccnaaggcaaatctatcaaatgaggaaattgttgcactcancaagcgaacccaagatggtggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21167" stop="18826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20886" g_stop="20586" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="473" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="642" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="704" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19126" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="774" r_length="70" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E728229" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20886" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGA</genome_strand>
        <mrna_strand>CCGCCGTAGCTTTTACC--TTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCNAAGGCAAATCTATCAAATGAGGAAATTGTTGCACTCANCAAGCGAACCCAAGATGGTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E251374" ref_strand="+" ref_description="SGN-E251374 [cLEG-23-J2]">
      <seq>taagagcatctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaatctctctggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacaaagcgaacccaagatggtggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20290" stop="18827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19991" g_stop="19836" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="325" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="387" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19195" g_stop="19127" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="456" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E251374" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19991" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGG</genome_strand>
        <mrna_strand>TAAGAGCATCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAATCTCTCTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E334438" ref_strand="+" ref_description="SGN-E334438 [cTOD-23-G21]">
      <seq>ttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatgaggaaattgttgcactcacnaagcgaaccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21169" stop="18837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20869" g_stop="20586" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="458" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="627" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="689" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19137" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="748" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E334438" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20869" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCA</genome_strand>
        <mrna_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACNAAGCGAACCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E437203" ref_strand="+" ref_description="SGN-E437203 [cSTA-3-C23]">
      <seq>cgaggccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaaatgaggaaattgttgcactcacaaagcgaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20901" stop="18839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20601" g_stop="20586" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.812"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="190" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="359" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="421" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19139" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="478" r_length="57" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E437203" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E437203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20601" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACC</genome_strand>
        <mrna_strand>CGAGGCCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAAATGAGGAAATTGTTGCACTCACAAAGCGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E579359" ref_strand="+" ref_description="SGN-E579359 [87342]">
      <seq>ctccgccgtagctttacctttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagctcaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgcaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccatttattttctcaagccactccaaaggcaaatctgtccaaatgagagaaattgttgcactcacaaaagcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21188" stop="18842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20888" g_stop="20586" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="477" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="646" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="709" r_length="63" r_score="0.935"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19142" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="766" r_length="57" r_score="0.852"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E579359" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20888" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCA-TTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTAT-CAGATGAG-GAAATTGTTGCACTCAC-AAAGCGA</genome_strand>
        <mrna_strand>CTCCGCCGTAGCTTTACCTTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTCAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGCAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCCAAATGAGAGAAATTGTTGCACTCACAAAAGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E728359" ref_strand="+" ref_description="SGN-E728359 [LA17CC11]">
      <seq>gaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctatcagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21123" stop="18867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20823" g_stop="20586" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="412" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="581" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="643" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19167" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="672" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E728359" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20823" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAGATGA</genome_strand>
        <mrna_strand>GAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTATCAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E466095" ref_strand="+" ref_description="SGN-E466095 [cPRO-23-M21]">
      <seq>ttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctgtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21176" stop="18872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20876" g_stop="20586" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="465" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="634" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="696" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19171" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="721" r_length="25" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E466095" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20876" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTATCAG</genome_strand>
        <mrna_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E727455" ref_strand="+" ref_description="SGN-E727455 [LA14DA01]">
      <seq>cgttccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21187" stop="18874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20890" g_stop="20586" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="479" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="648" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="710" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19174" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="732" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E727455" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20890" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTAT</genome_strand>
        <mrna_strand>CGTTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E727897" ref_strand="+" ref_description="SGN-E727897 [LA16AC12]">
      <seq>gctctttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagccactccaaaggcaaatctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21178" stop="18874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20878" g_stop="20586" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="468" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="637" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="699" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19195" g_stop="19174" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="700" r_stop="721" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E727897" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20878" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
          <exon e_start="19195" e_stop="19174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCT-TTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTTCTTTATGTTGTAAGTGTTTGATTGAACATTTTTTAGTATGTATTATCTAAATTGTTATTGGTGATTTCCATATTGTGGCATATTGAGTCTTGTTTTTATCACTAAATTTTGGATACAGGCCACTCCAAAGGCAAATCTAT</genome_strand>
        <mrna_strand>GCTCTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA.......................................................................................................................................................................................GCCACTCCAAAGGCAAATCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E701854" ref_strand="+" ref_description="SGN-E701854 [FA17AE06]">
      <seq>cttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgtgagtatgcttgtgtaattatctctgtatatgggggttatatataggagattctagaaaaagtttctgattaattttctcatttgctgcttgttctgataacttaaaggctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagtaatttttcttttcttgtcccttgttataaagcttttttcttttttagaatctattattatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="19014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19558" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="744" r_length="452" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19314" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="871" r_length="127" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E701854" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19558"/>
          <exon e_start="19440" e_stop="19314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTT</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTTCTTTTTTAGAATCTATTATTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E321304" ref_strand="+" ref_description="SGN-E321304 [cTOB-23-B13]">
      <seq>ttttttttttttctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgnaggtcatctcccagtagttggtggtcatgctggcataactatcctcccattattttctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21196" stop="19078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20900" g_stop="20586" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="489" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="659" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="720" r_length="61" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E321304" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20900" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG-GTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGN.....................................................................................................................AGGTC-ATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E420410" ref_strand="+" ref_description="SGN-E420410 [STM-31-M19]">
      <seq>tgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttncggtagttgggtgtcatgctggcataactatcctnccattattttctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21139" stop="19078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20839" g_stop="20586" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="428" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="597" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19379" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="659" r_length="62" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E420410" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20839" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA</genome_strand>
        <mrna_strand>TGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTNCGGTAGTTGGGTGTCATGCTGGCATAACTATCCTNCCATTATTTTCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E702036" ref_strand="+" ref_description="SGN-E702036 [FA17CE06]">
      <seq>cttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgtgagtatgcttgtgtaattatctctgtatatgggggttatatataggagattctagaaaaagtttctgattaattttctcatttgctgcttgttctgataacttaaaggctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctgggaaaactaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="19080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19558" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="744" r_length="452" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19440" g_stop="19380" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="805" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E702036" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19558"/>
          <exon e_start="19440" e_stop="19380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCA</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGGAAAACTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E259678" ref_strand="+" ref_description="SGN-E259678 [cLEG-42-M4]">
      <seq>gttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccattattttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21126" stop="19081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20826" g_stop="20586" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="415" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="584" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19381" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="644" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E259678" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259678" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20826" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTC</genome_strand>
        <mrna_strand>GTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E466105" ref_strand="+" ref_description="SGN-E466105 [cPRO-23-O21]">
      <seq>ttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacgggcattgctaagtactgccccaatgctctggtcaatatgataagcaacccaggtaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatcttccggcagttggtggtcatgctggcgatactatcctcccattattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21176" stop="19085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20876" g_stop="20586" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="465" r_length="174" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="634" r_length="169" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19385" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="690" r_length="56" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E466105" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20876" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTT</genome_strand>
        <mrna_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGGCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGGTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTTCCGGCAGTTGGTGGTCATGCTGGCGATACTATCCTCCCATTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E334432" ref_strand="+" ref_description="SGN-E334432 [cTOD-23-E21]">
      <seq>ttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21169" stop="19088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20869" g_stop="20586" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="458" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="627" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19388" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="680" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E334432" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20869" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTA</genome_strand>
        <mrna_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E731117" ref_strand="+" ref_description="SGN-E731117 [LA26AG09]">
      <seq>ctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactatcctcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21188" stop="19090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20888" g_stop="20586" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="477" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="646" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19390" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="697" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E731117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20888" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19390"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCAT</genome_strand>
        <mrna_strand>CTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E247531" ref_strand="+" ref_description="SGN-E247531 [cLEF-42-E20]">
      <seq>ggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtggtcatgctggcataactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21106" stop="19098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20806" g_stop="20586" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="395" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="564" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19398" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="607" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E247531" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20806" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTAT</genome_strand>
        <mrna_strand>GGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E252608" ref_strand="+" ref_description="SGN-E252608 [cLEG-20-B1]">
      <seq>gaggacctccatgttgaaatccatctttcgtcggagctccactgccggagcatcctaggtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccactagttggtggtcatgctggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21138" stop="19104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20838" g_stop="20586" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="427" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="596" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19404" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="633" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E252608" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20838" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCAT</genome_strand>
        <mrna_strand>GAGGACCTCCATGTTGAAATCCATCTTTCGTCGGAGCTCCACTGCCGGAGCATCCTAGGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCACTAGTTGGTGGTCATGCTGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E373528" ref_strand="+" ref_description="SGN-E373528 [TUS-31-J18]">
      <seq>tccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctcccagtagttggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21187" stop="19117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20887" g_stop="20586" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="476" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="645" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19417" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="669" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E373528" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20887" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTCCCAGTAGTTGGTG</genome_strand>
        <mrna_strand>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTCCCAGTAGTTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E343395" ref_strand="+" ref_description="SGN-E343395 [cTOF-19-I6]">
      <seq>cgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21144" stop="19258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20844" g_stop="20586" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="433" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="602" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19430" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="613" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E343395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20844" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19430"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCTC</genome_strand>
        <mrna_strand>CGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E406282" ref_strand="+" ref_description="SGN-E406282 [PPI-3-E16]">
      <seq>gttgcagttttgggggcagccggagggcttggacaagcctttatctcttctaatgaaagcttaaccctttaagtatccagcctttcactctacgaatatcgccggcacccccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaagctaaagtaaatgttgctgaggtcaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21035" stop="19258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20735" g_stop="20586" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="328" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="497" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19440" g_stop="19431" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="507" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E406282" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20735" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
          <exon e_start="19440" e_stop="19431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGAC-AGCCTTTATCTCTTCTAATG-AAGCTTAACCCTTT-AGTATCCAGCCTTTCACTCTACG-ATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTGGTGCGCGTCTTCTTGTCTAATTCTTTATTTGAATTGATTTTGTTTCGCTTTACATGAAACTGTAAATTCATACAATACTATCTGTCTACTTTACTTACTTTTTGCTTCGTTTTTCAGAGGTCAATCT</genome_strand>
        <mrna_strand>GTTGCAGTTTTGGGGGCAGCCGGAGGGCTTGGACAAGCCTTTATCTCTTCTAATGAAAGCTTAACCCTTTAAGTATCCAGCCTTTCACTCTACGAATATCGCCGGCACCCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG.....................................................................................................................AGGTCAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E320360" ref_strand="+" ref_description="SGN-E320360 [cTOB-22-O17]">
      <seq>ttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttaggggcaagacattttatgctggaaaagctaaagtaaatgttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21176" stop="19258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20876" g_stop="20586" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="465" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19558" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="634" r_length="169" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E320360" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20876" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG</genome_strand>
        <mrna_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGGCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E442896" ref_strand="+" ref_description="SGN-E442896 [cSTA-35-K16]">
      <seq>ccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="19277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20830" g_stop="20586" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="419" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19577" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="569" r_length="150" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E442896" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20830" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAA</genome_strand>
        <mrna_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E306379" ref_strand="+" ref_description="SGN-E306379 [cLEX-13-L7]">
      <seq>tcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttaaggccaagacattttatgctggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21064" stop="19277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20764" g_stop="20586" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="353" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19577" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="503" r_length="150" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E306379" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20764" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAA</genome_strand>
        <mrna_strand>TCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAAGGCCAAGACATTTTATGCTGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E445698" ref_strand="+" ref_description="SGN-E445698 [cSTA-18-A12]">
      <seq>ctctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagaacagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20951" stop="19277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20651" g_stop="20586" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="240" r_length="174" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19577" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="390" r_length="150" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E445698" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20651" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAA</genome_strand>
        <mrna_strand>CTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAACAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E442833" ref_strand="+" ref_description="SGN-E442833 [cSTA-35-K15]">
      <seq>ccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="19278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20830" g_stop="20586" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="419" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19578" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="568" r_length="149" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E442833" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20830" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAA</genome_strand>
        <mrna_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E444382" ref_strand="+" ref_description="SGN-E444382 [cSTA-42-B8]">
      <seq>atttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggccaagacattttatgctggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21161" stop="19279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20861" g_stop="20586" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="450" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19579" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="598" r_length="148" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E444382" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20861" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAA</genome_strand>
        <mrna_strand>ATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E728721" ref_strand="+" ref_description="SGN-E728721 [LA18DA02]">
      <seq>ccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatggggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggttagggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21111" stop="19298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20811" g_stop="20586" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="400" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19598" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="529" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E728721" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20811" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCC</genome_strand>
        <mrna_strand>CCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATGGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E444089" ref_strand="+" ref_description="SGN-E444089 [cSTA-41-G22]">
      <seq>cgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgctgctgaggtgtttaagaaggctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21185" stop="19303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20885" g_stop="20586" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="474" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19603" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="598" r_length="124" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E444089" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20885" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTA</genome_strand>
        <mrna_strand>CGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTAAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E310629" ref_strand="+" ref_description="SGN-E310629 [cLEZ-19-O7]">
      <seq>ttttaccttgtcctcatttcgtttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgtggtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21176" stop="19303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20876" g_stop="20586" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="465" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19603" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="589" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E310629" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20876" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTA</genome_strand>
        <mrna_strand>TTTTACCTTGTCCTCATTTCGTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E207294" ref_strand="+" ref_description="SGN-E207294 [cLEC-30-M22]">
      <seq>catgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21129" stop="19308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20829" g_stop="20586" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="418" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19608" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="537" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E207294" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207294" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20829" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGT</genome_strand>
        <mrna_strand>CATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E300078" ref_strand="+" ref_description="SGN-E300078 [cLEW-11-C8]">
      <seq>ctcgtgccgccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21145" stop="19309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20855" g_stop="20586" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="443" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19609" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="561" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E300078" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20855" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATG</genome_strand>
        <mrna_strand>CTCGT-GCCGCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E246993" ref_strand="+" ref_description="SGN-E246993 [cLEF-41-C20]">
      <seq>cgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctcttttgagttaccatgcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21144" stop="19309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20844" g_stop="20586" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="433" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19609" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="551" r_length="118" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E246993" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20844" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATG</genome_strand>
        <mrna_strand>CGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTTGAGTTACCATGCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E316932" ref_strand="+" ref_description="SGN-E316932 [cTOA-27-J7]">
      <seq>agcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21179" stop="19310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20879" g_stop="20586" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="468" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19610" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="585" r_length="117" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E316932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20879" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19610"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGAT</genome_strand>
        <mrna_strand>AGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E327713" ref_strand="+" ref_description="SGN-E327713 [cTOC-20-O17]">
      <seq>ttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttggagttaccatgcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21169" stop="19310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20869" g_stop="20586" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="458" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19610" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="575" r_length="117" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E327713" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20869" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19610"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGAT</genome_strand>
        <mrna_strand>TTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E306144" ref_strand="+" ref_description="SGN-E306144 [cLEY-13-L20]">
      <seq>cttttcctcatttcttttgtctattccgaaatgaggaccggcatgttgaaatccatcgtgcgccggagctccactgccggagcatcctatgtatctcgccgtggatgcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaaggaagcttaaccctttagtatccagcctttcactctacgatgtcgccggtactcccggtgttgccgccgatgtgtagtcacatcaacaccatatctgaagttgccggtattgcaggataagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgctaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattgcactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaagaagctctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21170" stop="19327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20870" g_stop="20586" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="460" r_length="174" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19627" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="560" r_length="100" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E306144" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20870" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGT-TAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTG</genome_strand>
        <mrna_strand>CTTTTCCTCATTTCTTTTGTCTATTCCGAAATGAGGACCGGCATGTTGAAATCCATCGTGCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATGCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAAGGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATGTCGCCGGTACTCCCGGTGTTGCCGCCGATGTGTAGTCACATCAACACCATATCTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTATTGCAGGATAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGCTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTGCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E409137" ref_strand="+" ref_description="SGN-E409137 [PPI-13-A2]">
      <seq>cttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgcccccatgctctggtncatatgataagcaacccagttaattccactgtcccaattgctgctgaggtgttttagaaggctggaacttatgatgaaaagaagctcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="19328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="466" r_length="174" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19628" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="565" r_length="99" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E409137" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTT</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCCAT.............................................................................................................GCTCTGGTNCATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTGAGGTGTTTTAGAAGGCTGGAACTTATGATGAAAAGAAGCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E288543" ref_strand="+" ref_description="SGN-E288543 [cLES-8-O15]">
      <seq>ttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgatatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcgacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21174" stop="19338"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20874" g_stop="20586" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="463" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19638" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="552" r_length="89" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E288543" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20874" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAA</genome_strand>
        <mrna_strand>TTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGATATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCGACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E302337" ref_strand="+" ref_description="SGN-E302337 [cLEW-27-A2]">
      <seq>ttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattgacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctgaggtgtttaagaaagctggaacttatgatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21176" stop="19339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20876" g_stop="20586" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="464" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19639" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="552" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E302337" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20876" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAA</genome_strand>
        <mrna_strand>TTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATT-GACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E322933" ref_strand="+" ref_description="SGN-E322933 [cTOB-30-G4]">
      <seq>gcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacgggcattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21178" stop="19372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20878" g_stop="20586" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="467" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19672" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="522" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E322933" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20878" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTG</genome_strand>
        <mrna_strand>GCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGGCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E476804" ref_strand="+" ref_description="SGN-E476804 [cSTB-46-C3]">
      <seq>cttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagttaattccactgtcccaattgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="19372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="466" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19672" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="521" r_length="55" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E476804" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTG</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTTAATTCCACTGTCCCAATTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E244247" ref_strand="+" ref_description="SGN-E244247 [cLEF-37-K19]">
      <seq>aatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21141" stop="19372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20841" g_stop="20586" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="430" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19672" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="485" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E244247" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20841" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTG</genome_strand>
        <mrna_strand>AATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E463853" ref_strand="+" ref_description="SGN-E463853 [cPRO-16-M13]">
      <seq>cttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccggagaggaaagttgtagttttgggggcagccggagggattggacagcctttatctcttctaatgaagctcaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggcaggctctggaaggagctgatgtagttatcattcctgctggtgtaccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcaccgccattgctaagtactgccccaatgctctggtccatatgataagcaacccagtgaattccactgtcccaattgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21157" stop="19373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20857" g_stop="20586" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="446" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19673" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="500" r_length="54" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E463853" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20857" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCT</genome_strand>
        <mrna_strand>CTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCGGAGAGGAAAGTTGTAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTCAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCTCTGGAAGGAGCTGATGTAGTTATCATTCCTGCTGGTGTACCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACCGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCCATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E446532" ref_strand="+" ref_description="SGN-E446532 [cSTA-21-B24]">
      <seq>gaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtcccaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21039" stop="19376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20739" g_stop="20586" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="328" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19676" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="379" r_length="51" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E446532" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20739" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCT</genome_strand>
        <mrna_strand>GAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E296035" ref_strand="+" ref_description="SGN-E296035 [cLET-27-H21]">
      <seq>tccgccgtatcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgctaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagcaacccagtgaattccactgtccctattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21187" stop="19378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20887" g_stop="20586" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="476" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19678" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="525" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E296035" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20887" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTG</genome_strand>
        <mrna_strand>TCCGCCGTATCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGCTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E203284" ref_strand="+" ref_description="SGN-E203284 [cLEB-3-D3]">
      <seq>gcacgagcacaaatgaaagttttgacaggctttttttgttgccaataaatagtgcccacacagtaacacaccacaactcctaatttattttctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21274" stop="19406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20979" g_stop="20586" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="568" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19706" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="589" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E203284" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20979" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTATCACAAATGAAAGTTTTGACAGGCTTTTTTTGTTGCCAATAAATAGTGCCCACACAGTAACACACCACAACTCCTAATTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGC</genome_strand>
        <mrna_strand>GCACGAGCACAAATGAAAGTTTTGACAGGCTTTTTTTGTTGCCAATAAATAGTGCCCACACAGTAACACACCACAACTCCTAATTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E289046" ref_strand="+" ref_description="SGN-E289046 [cLES-17-P18]">
      <seq>tttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcatctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattggtaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21175" stop="19406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20875" g_stop="20586" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="464" r_length="174" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19706" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="485" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E289046" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20875" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGC</genome_strand>
        <mrna_strand>TTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCATCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGGTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E725926" ref_strand="+" ref_description="SGN-E725926 [LA08DA10]">
      <seq>cttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcatgagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21177" stop="19407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20877" g_stop="20586" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="466" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19707" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="486" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E725926" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20877" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAG</genome_strand>
        <mrna_strand>CTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCATGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E442834" ref_strand="+" ref_description="SGN-E442834 [cSTA-35-K17]">
      <seq>ccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccacagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgctcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="19408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20830" g_stop="20586" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="419" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19708" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="438" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E442834" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20830" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAA</genome_strand>
        <mrna_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCACAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGCTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E446355" ref_strand="+" ref_description="SGN-E446355 [cSTA-20-H10]">
      <seq>agagagaactagtctcgagttttattttctccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21196" stop="19409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20896" g_stop="20586" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="331" r_length="311" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="505" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19709" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="523" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E446355" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20896" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATA</genome_strand>
        <mrna_strand>TTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E440925" ref_strand="+" ref_description="SGN-E440925 [cSTA-28-D17]">
      <seq>gtagcttttaccttttcctcatttcttttgtatggtccgaaatgaggacctccatgttgaaacccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21181" stop="19410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20881" g_stop="20586" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="470" r_length="174" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19710" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="487" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E440925" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20881" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGAT</genome_strand>
        <mrna_strand>GTAGCTTTTACCTTTTCCTCATTTCTTTTGTATGGTCCGAAATGAGGACCTCCATGTTGAAACCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E288432" ref_strand="+" ref_description="SGN-E288432 [cLES-16-D22]">
      <seq>taccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaagtactgccccaatgctctggtcaatatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21173" stop="19410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20873" g_stop="20586" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="462" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19710" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="479" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E288432" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20873" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGAT</genome_strand>
        <mrna_strand>TACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E442897" ref_strand="+" ref_description="SGN-E442897 [cSTA-35-K18]">
      <seq>ccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgatgttgtcggttttgcaggacaagagcaactagggaaggctctggaaggagctgatatagtcatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttgcacggccattgctaagtactgccccaatgctctggtcaatatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21130" stop="19410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20830" g_stop="20586" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="419" r_length="174" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19710" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="436" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E442897" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20830" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGAT</genome_strand>
        <mrna_strand>CCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGACAAGAGCAACTAGGGAAGGCTCTGGAAGGAGCTGATATAGTCATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTGCACGGCCATTGCTAAGTACTGCCCCAAT.............................................................................................................GCTCTGGTCAATATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E284534" ref_strand="+" ref_description="SGN-E284534 [cLES-3-O20]">
      <seq>tttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggccattgctaaatactgccccaatgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21175" stop="19535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20875" g_stop="20586" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19836" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="464" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109">
            <donor d_prob="0.718" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19726" g_stop="19722" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="469" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E284534" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20875" e_stop="20586"/>
          <exon e_start="20009" e_stop="19836"/>
          <exon e_start="19726" e_stop="19722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCT</genome_strand>
        <mrna_strand>TTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAATACTGCCCCAAT.............................................................................................................GCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E292053" ref_strand="+" ref_description="SGN-E292053 [cLET-1-A9]">
      <seq>tccgccgtagcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgataaatctctatgcacggccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21187" stop="19554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20887" g_stop="20586" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19854" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="458" r_length="156" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E292053" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20887" e_stop="20586"/>
          <exon e_start="20009" e_stop="19854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATT</genome_strand>
        <mrna_strand>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGATAAATCTCTATGCACGGCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E321807" ref_strand="+" ref_description="SGN-E321807 [cTOB-25-N7]">
      <seq>gcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctatgcacggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21178" stop="19558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20878" g_stop="20586" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19860" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="443" r_length="150" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E321807" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20878" e_stop="20586"/>
          <exon e_start="20009" e_stop="19860"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACG</genome_strand>
        <mrna_strand>GCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E444638" ref_strand="+" ref_description="SGN-E444638 [cSTA-43-N9]">
      <seq>cttttgtttattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggaggaattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggtattgttaaatctctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21157" stop="19564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20857" g_stop="20586" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19864" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="418" r_length="146" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E444638" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20857" e_stop="20586"/>
          <exon e_start="20009" e_stop="19864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATG</genome_strand>
        <mrna_strand>CTTTTGTTTATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGAATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E341261" ref_strand="+" ref_description="SGN-E341261 [cTOE-22-O4]">
      <seq>tcatttcttttgtatattccgtaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggcgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgcgggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21163" stop="19580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20863" g_stop="20586" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19880" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="408" r_length="130" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E341261" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20863" e_stop="20586"/>
          <exon e_start="20009" e_stop="19880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTA</genome_strand>
        <mrna_strand>TCATTTCTTTTGTATATTCCGTAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGCGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E400488" ref_strand="+" ref_description="SGN-E400488 [cSTC-14-E23]">
      <seq>cttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaggagaagagcagctagggaaggctctggaaggagctgatatagntatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21170" stop="19585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20870" g_stop="20586" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19887" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="408" r_length="123" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E400488" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E400488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20870" e_stop="20586"/>
          <exon e_start="20009" e_stop="19887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAAT</genome_strand>
        <mrna_strand>CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAGGAGAAGAGCAGCTAGGGAAGGCTCTGGAAGGAGCTGATATAGNTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E269866" ref_strand="+" ref_description="SGN-E269866 [cLEM-17-J1]">
      <seq>tgaggacctccatgttgaaatccatcgtgcgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatgatctgttcaacattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21139" stop="19586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20839" g_stop="20586" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19887" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="377" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E269866" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20839" e_stop="20586"/>
          <exon e_start="20009" e_stop="19887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAAT</genome_strand>
        <mrna_strand>TGAGGACCTCCATGTTGAAATCCATCGTGCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E475494" ref_strand="+" ref_description="SGN-E475494 [cSTB-40-O3]">
      <seq>ctctctctctctctctctctctctctcccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagaatcctatgtatcccgccgtggattcgcatcgggatccgcaccagagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggcactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgtcggttttgcaagagaagagcatctagggaaggctctggaaggagctgatatagttatcattcctgctggtgtgccccgaaagcctggtatgacccgagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21170" stop="19603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20845" g_stop="20586" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="287" r_length="260" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19903" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="394" r_length="107" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E475494" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20845" e_stop="20586"/>
          <exon e_start="20009" e_stop="19903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGA</genome_strand>
        <mrna_strand>CCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGAATCCTATGTATCCCGCCGTGGATTCGCATCGGGATCCGCACCAGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGCACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGGTTTTGCAAGAGAAGAGCATCTAGGGAAGGCTCTGGAAGGAGCTGATATAGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E322137" ref_strand="+" ref_description="SGN-E322137 [cTOB-24-A6]">
      <seq>agcttttaccttttcctcatttcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggattggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctgaggttgccggttttgcaggagaagagcagctagggcaggcactggaaggagctgatgttgttatcattcctgctggtgtgccccgaaagcctggtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21179" stop="19615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20879" g_stop="20586" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20009" g_stop="19915" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="389" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E322137" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20879" e_stop="20586"/>
          <exon e_start="20009" e_stop="19915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAGGTTGTTTTCTACTCTCTCTCTCCCTTACGTTTTCTACTTGGAATTCTCTGTTTTTGTTCATTTTGTATGAGTATTGGCGAAGATTACTAATGAGGATTTGTATTAACTAAATTGGAACTAAGACGTATCTGGTAGGTTGATTGATTCTGTTAACATGCTTTTTTGATTTCCTGAATCTCGAGCTCCGATCCGATTTACGTTAGTCGATTTCACTAGTGAGTTTGAGTTTGTTGCTTGCTTCATTCCACTATTTAGTCTATTTTTCGAGTGTGTATCACATAAGTACATATAGATTCGTGAATGAGTTACTAAAGTACAAGGTTTTGTGCTGAAAACTAGGTGTTTGTCAGCAATGAAGAGTTCAACACCAGATCATTTTACTCTTTGCATCAGTTGCCTGTTTTAATTTCAAGATGATTTGATTACAATGTTGTTTTAGGCGTCCACTGTCAAGTAGTTAACGATTTGAAGCCCATCTACCTTTTGTGTCCTAAACCCCTCTAAATAGTGTTTGTGCCAGTTTATGGTTTTCTTTCCTGCAATTCTGATCTGTAAATATATTTGTGGACTTTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTAT</genome_strand>
        <mrna_strand>AGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E278313" ref_strand="+" ref_description="SGN-E278313 [cLEL-2-A2]">
      <seq>gcacgagtttcctcattgcttttgtatattccgaaatgaggacctccatgttgaaatccatcgtccgccggagctccactgccggagcatcctatgtatctcgccgtggattcgcatcgggatccgcgccggagaggaaagttgcagttttgggggcagccggagggatcggacagcctttatctcttctaatgaagcttaaccctttagtatccagcctttcactctacgatatcgccggtactcccggtgttgccgccgatgttagtcacatcaacaccagatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="21168" stop="20288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20874" g_stop="20588" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E278313" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20874" e_stop="20588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAC-CTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTG</genome_strand>
        <mrna_strand>GCACGAGTTTCCTCATTGCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATCGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E547735" ref_strand="+" ref_description="SGN-E547735 [TUS-71-M8]">
      <seq>atttctttttatcatattagatttcgattaaatttgaaatttttttattgaatagcagacccttgaattcaaacatgtgatttaagacgattgttcgtatgtccaggggatgaatcttgtttgaaatagatggtatgaatttgtcaaacattcaacaagaaattcttcgtgatcatatataattatttttaagaatgtgactaaagacgattgttcgtatgtctgggggatgaatcttgtctgaaatagatggtatgaatttatcgaatatccaacaaaaaattctttgtgatcatacgtaattgttgtcaagcatgtgattaaagacgattgttcgtatatccgggagatgaatcttgtctgaaatagatggtatgaatttgtcaaacattcaacaagaaattcttcgtgatcatgcataattattttcaagaatgtgactaaatacgattgttcgtatgtctggggggatgattcttgtctgaattagatagtatgaatttatcaaatattcaacaagaaattcttcgtgatcatacgtaattattgtcaagcatgtgatgaaagacgattgtttgtatatccaggggatgaatcttttttttgaaagagatggtatgaatttgtcaaataatcaacaagaaattcttcgtgatcatacataattattttcaagcatgtgactaaagacgattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="20690" stop="22086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20990" g_stop="21061" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21062" i_stop="21171" i_length="110">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21172" g_stop="21230" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="129" r_length="56" r_score="0.915"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21231" i_stop="21337" i_length="107">
            <donor d_prob="0.826" d_score="0.90"/>
            <acceptor a_prob="0.580" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21338" g_stop="21908" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="697" r_length="568" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E547735" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20990" e_stop="21061"/>
          <exon e_start="21172" e_stop="21230"/>
          <exon e_start="21338" e_stop="21908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTC-TTTTATCATATTAGATCTCGATTAAATTTGAAACTTTTTTATTGAATAGTAGACTCTTGAATTCAAACAAGACGATTATTCATATGTCCAGGGATGAATCTTGTTTGAATTAGATGGTATGAATTTGTCAAACATTCAACAAAAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGATTAAAGACGATTGTTCGTATGTCCAGGGGATGAATCTTGTTTGAAACAAATGGTATGAATTTGTTGAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCGAGAATGTGACTGTTCGTATATCCAAGGGATGAATCTTGTCTGAAACAGATGATATAAATTTATCAAACATGCAACAAGAAATTCTTCGTGATCATGCATAATTATTTTCAAGAATGTGACTAAATACGATTGTTCGTATGTCTGGGAGATGAATCTTGTCTGAAATAGATAGTATGAATTTATCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTGTCAAGCATGTGATTAAAGACGATTGTTCATATATTCAGGGGATGAATGTTTTTTTTTTGAAATAGATGGTATGAATTTGTCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGGATGTGACTAAAGACGATTGTTCGTATGTAT-GGGGAATAAATCTTGTCTGAAATAGATGGTATGAATTTATCAAATATTCAGCAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGATTAAAGACGATTGTTCATATATTCAGGGGATGAATCTTTTTTTTGAAATAGATGGTATGAATTTGTCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGATTAAAGACGGTTGT</genome_strand>
        <mrna_strand>ATTTCTTTTTATCATATTAGATTTCGATTAAATTTGAAATTTTTTTATTGAATAGCAGACCCTTGAATTCAAA..............................................................................................................CATGTGATTTAAGACGATTGTTCGTATGTCCAGGGGATGAATCTTGTTTG-AA-ATA-G...........................................................................................................ATGGTATGAATTTGTCAAACATTCAACAAGAAATTCTTCGTGATCATATATAATTATTTTTAAGAATGTGACTAAAGACGATTGTTCGTATGTCTGGGGGATGAATCTTGTCTGAAATAGATGGTATGAATTTATCGAATATCCAACAAAAAATTCTTTGTGATCATACGTAATTGTTGTCAAGCATGTGATTAAAGACGATTGTTCGTATA-TC-CGGGA-G-ATGAATCTTGTCTGAAATAGATGGTATGAATTTGTCAAACATTCAACAAGAAATTCTTCGTGATCATGCATAATTATTTTCAAGAATGTGACTAAATACGATTGTTCGTATGTCTGGGGGGATGATTCTTGTCTGAATTAGATAGTATGAATTTATCAAATATTCAACAAGAAATTCTTCGTGATCATACGTAATTATTGTCAAGCATGTGATGAAAGACGATTGTTTGTATATCCAGGGGATGAATCTTTTTTTTGAAAGAGATGGTATGAATTTGTCAAATAATCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGACTAAAGACGATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E353555" ref_strand="-" ref_description="SGN-E353555 [cTOS-15-H3]">
      <seq>catgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaatattttgatctcttttgttcacttgtgacattgtctcagcattaaggttttggagacatgatcaaagagcccagctggttttgagtgttatttcttgattctaagcaatgtacccaaatttctaatgtcaatctatatgcagtggttgttttgttctcaaaaaaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23234" stop="22227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22934" g_stop="22527" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="409" polyA_stop="432"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E353555" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353555" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="22934" e_stop="22527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCAATCTATATGCAGTGGTTGTTTTGTTCTC</genome_strand>
        <mrna_strand>CATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCAATCTATATGCAGTGGTTGTTTTGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E219798" ref_strand="-" ref_description="SGN-E219798 [cLEL-24-I10]">
      <seq>gctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccctgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaatattttgatctcttttgttcacttgtgacattgtctcagcattaaggttttggagacatgatcaaagagcccagctggttttgagtgttatttcttgattctaagcaatgtacccaaatttctaatgtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23310" stop="22254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23010" g_stop="22555" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="457" polyA_stop="472"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E219798" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219798" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="23010" e_stop="22555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</genome_strand>
        <mrna_strand>GCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCCTGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E226756" ref_strand="-" ref_description="SGN-E226756 [cLEL-26-N3]">
      <seq>cgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaatattttgatctcttttgttcacttgtgacattgtctcagcattaaggttttggagacatgatcaaagagcccagctggttttgagtgttatttcttgattctaagcaatgtacccaaatttctaatgtcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23279" stop="22254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22979" g_stop="22555" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="426" polyA_stop="442"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E226756" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E226756" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="22979" e_stop="22555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</genome_strand>
        <mrna_strand>CGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E226863" ref_strand="-" ref_description="SGN-E226863 [cLEL-26-N3]">
      <seq>gctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaatattttgatctcttttgttcacttgtgacattgtctcagcattaaggttttggagacatgatcaaagagcccagctggttttgagtgttatttcttgattctaagcaatgtacccaaatttctaaagtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23263" stop="22254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22963" g_stop="22555" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="410" polyA_stop="425"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E226863" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E226863" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="22963" e_stop="22555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</genome_strand>
        <mrna_strand>GCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAAAGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E219942" ref_strand="-" ref_description="SGN-E219942 [cLEL-24-I10]">
      <seq>atctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaatattttgatctcttttgttcacttgtgacattgtctcagcattaaggttttggagacatgatcaaagagcccagctggttttgagtgttatttcttgattctaagcaatgtacccaaatttctaatgtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23199" stop="22254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22899" g_stop="22555" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="347" polyA_stop="362"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E219942" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219942" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="22899" e_stop="22555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAAC-AACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</genome_strand>
        <mrna_strand>ATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E544555" ref_strand="-" ref_description="SGN-E544555 [TUS-66-P5]">
      <seq>tatgcaggaagccgagtctgatttaagtatcttcactggccactcatctgccttgcctacttccttagtgagtgcaaacaatgttgtttctgccaatccagttctctcaagtactctgttgacagatttcagtgaagtaaatgcctctagttctcacgagttggttggaaatggtaggtccgttcaaaatgacctcgagtgttgtccaagccctcagctgatatatcccgcagaaataggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24995" stop="22383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24695" g_stop="24562" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24561" i_stop="24427" i_length="135">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24426" g_stop="24322" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="239" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24321" i_stop="23301" i_length="1021">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="388" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23070" g_stop="22677" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="782" r_length="394" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E544555" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544555" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="24695" e_stop="24562"/>
          <exon e_start="24426" e_stop="24322"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGTTTCTGCCAATCCAGTTCTCTCAAGTACTCTGTTGACAGATTTCAGTGGTAAGTGGATTCCTCTTTCAACCCTCTGGTCTAGTAGTAAACGATAAACAATGTCCAGTTTTTTGTTCTCTCTGTTTCTACTTTCTTTTTTCTTTCTATTGTATCCATTGCTTCAATAGATTTCTCCTTTTGCAGAAGTAAATGCCTCTAGTTCTCACGAGTTGGTTGGAAATGGTAGGTCCGTTCAAAATGACCTCGAGTGTTGTCCAAGCCCTCAGCTGATATATCCCGCAGAAATAGGTACTATATGGAGGAACTTTGTTTTTTTCTTCTTTCTCTCCTTTGAAATTCGTGTGTTTCTAACAAAGTCACAATCAAACTACGGCAATGTAGCTGAGATGATGATGCATGTATTAAACGATGAGAATAATGAGAAATGAGTGCAAACTCAGTTCTTTGCTGCAATACATGCTTACTACGTAGTAGTTGATTGCCTGTGTGTGCTGCAGGGATGCTATAACATATCATTTTCCCGGAAGGAGAGTTCACAGTTTAATTGTGGGTTTGAAAATTTGAGCTCTATAAGGCAGCATCATATGATCAAAATGAAATTAATCAGTCCCATATTTTCCTTGTTCTCCTCCCCTCCCATATAAAAAAGAAATGAAAAAGGAAATTTGAGGGTGAAGGGATGATACTGACTCGAATGCTTTGTCTACTTCTTTTCAGTATACCGAAATGAATATTGTTGGATCAGCTGTATCTCTGCGAGTATAAGACTTATGGAAGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGA</genome_strand>
        <mrna_strand>TATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGTTTCTGCCAATCCAGTTCTCTCAAGTACTCTGTTGACAGATTTCAGTG.......................................................................................................................................AAGTAAATGCCTCTAGTTCTCACGAGTTGGTTGGAAATGGTAGGTCCGTTCAAAATGACCTCGAGTGTTGTCCAAGCCCTCAGCTGATATATCCCGCAGAAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E233263" ref_strand="+" ref_description="SGN-E233263 [cLED-6-D15]">
      <seq>agaataaaagggttgtgggatttcactagaggaacctctgtggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaaaaaaaaaanaanaaaaaaaaaaaaaactcgagtagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24134" stop="22383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23834" g_stop="23793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="191" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23070" g_stop="22686" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="576" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="577" polyA_stop="588"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E233263" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23834" e_stop="23793"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</genome_strand>
        <mrna_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E375019" ref_strand="+" ref_description="SGN-E375019 [TUS-36-K3]">
      <seq>agaataaaagggttgtgggatttcactagaggaacctctgtggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagtagttcaaaagccttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24134" stop="22383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23834" g_stop="23793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="191" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23070" g_stop="22686" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="576" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="577" polyA_stop="604"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E375019" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23834" e_stop="23793"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</genome_strand>
        <mrna_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E376914" ref_strand="+" ref_description="SGN-E376914 [TUS-19-P7]">
      <seq>agaataaaagggttgtgggatttcactagaggaacctctgtggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttgataaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagtagttcaaaagccttactttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24134" stop="22383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23834" g_stop="23793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="191" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23070" g_stop="22686" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="576" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="582" polyA_stop="604"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E376914" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23834" e_stop="23793"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</genome_strand>
        <mrna_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E745776" ref_strand="+" ref_description="SGN-E745776 [GI|47105094]">
      <seq>gactgtgcttgtcaccattaataatattttttctctttttatatgtatatgcatctccttcatctttttagctcagtgcttttgcttcagcgtttaatctttgcctattgatcaaatttatgtcttctttgtgcatcttcggtgacactgctattttggataaagacattgcctagtctttaaatgatcatgaagtgttatcaggatatagtttcctgattgattcatagattgcaccaatggagaaatccagaagcaaaagttgggttgggagcatttaccacaagtttgaggttgtgtgtcaggaggtcgatgaatttgtaactaaggacacagttaagtatgtcgagaatcaggtgcaaactgttggtgcaaacatgaaaaagttttactctggtgtggtgccagagtttcttatccctgtggacagtcatgtaaaaaaagaagcacaggctgtcaatgagaagccaaagcacgccagggacactcatactagttcagtggccaacactactcagaaccctatccaagagaaatcatgtcagaatcagaattcccttgaaagtcatgctgcttcaacttcaactgaacttgatggtgtagcttctgaagaagcagaaattgatctttctgtaggaaatgagtgtgccactgcgatttgtaagaactcatgtaatgtttttaaagagaatatgacaagggaggaagcactggtagttgacaaaccaagtacttcagaagacagagtttcatctgaatcctgttctgacaaagattcgaaagataccatgtgctatagcttttcagatgatggtaagtgtttttctgatgtatcaagctctcagattatacgacaagatgatatggtcggggaggaacaaccacttgctaagggatcaagttcatttttggataatttgtctacatcacaactcacggcctctattaatgaaaaaaatgtttgatacttctcctgatgctatcaactgtatttctaatgtatcaagtagtcaaatggttttgcaacggaacatcactagggaggtggaacctgtcactgatcaatcaatttcctttggagatatggctctatcaaagtcattatcattttcaatggaggaaagtgaaggaaatcccaccatgactaagttacaacgtccaacttcagtttatgatacagaacttaggaccaacccagaggatgagagcatttccaatgcttcaataactctgacgaatttgcaagacaatatcatcagtgaggatcgacttgcatccaaggaatcaagttttgtcaaagataaaagtttgccactaaccccagcatttgcatctgttatacctccttcacgaaatgatgcaggatttggggcgtccattgccgcgagtaagagttttttgggtgatgttacttttgtatctgaagagtctagtacaaccttggcattagaagatgctccaagcgcacttcagtcatctgaacttgtactttctcgtgttatggagaacaaaagtatggatgttgacactggaatatcaaactgttctctgttaaaagaatcttcaagcctgtcaacttcctcaattggaaactgtatgcaggaagccgagtctgatttaagtatcttcactggccactcatctgccttgcctacttccttagtgagtgcaaacaatgttgtttctgccaatccagttctctcaagtactctgttgacagatttcagtgaagtaaatgcctctagttctcacgagttggttggaaatggtaggtccgttcaaaatgacctcgagtgttgtccaagccctcagctgatatatcccgcagaaataggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctactgtgagattaatggtagaaactacatcttatttttccctttcatataataagataacaatttttggcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="28355" stop="22383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28056" g_stop="27916" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27915" i_stop="26329" i_length="1587">
            <donor d_prob="0.257" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26328" g_stop="26141" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="329" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26140" i_stop="25961" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25960" g_stop="24562" g_length="1399"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="1729" r_length="1400" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24561" i_stop="24427" i_length="135">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24426" g_stop="24322" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1730" r_stop="1834" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24321" i_stop="23301" i_length="1021">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1835" r_stop="1983" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23070" g_stop="22690" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1984" r_stop="2364" r_length="381" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2367" polyA_stop="2380"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E745776" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2363</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28056" e_stop="27916"/>
          <exon e_start="26328" e_stop="26141"/>
          <exon e_start="25960" e_stop="24562"/>
          <exon e_start="24426" e_stop="24322"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTGTGCTTGTCACCATTAATAATATTTTTTCTCTTTTTATATGTATATGCATCTCCTTCATCTTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCGGTATGTTTTCGTATTTGAGTCAACTGAATTTGGGTTTTTTTTTGTTTTTGGTTCTTTGAGAAGCCCTTATTTTTTTGGGGCCTAAAGCCCTTGTAGAGGATATGGGTAATTTTTTTCTTTTGTTTGTTTGGTTGGAATTGAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTGTTTTTTGGGAATTCTCAGATGATAAAGTTGACTGATTTCTACTGTAATTTAGTTCATTAAGCTGCTGATCATTGGTTTTTGATGTGTGATTATGCTTTTTTTTTCCTTGGCTTTGATGTTTTGTTTACATAAGGTATTGTGTTCCTGTAAAGATAGGATCTTTCTACCTTTAGGGTACGGGTAAGGTCTGTGTAGACCGCACTAAAGTGGTTATGCTGTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTTCCTATCTTGTTATTTCAAGAGCTTGATCATTACAAATGCTTACACCCCAAACTTGTAATCGATTCGTCCCCTAATAGTGTGTTGTATTTGTTCTTGTTACGTTGATATTGGGCCATCGAATTGCACGATATTAATTCGACTTTTAATGGTGTGATGGACCCCTTTGTGCTTGAAATCTCTATGTACTCTATCTGATACTTTTTTTCTTGGTGTATACTGTAGTTAAGGATATGGGTAATTTTTTTCTTTTGTTTGGTTAGTATAGAAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTTTTTTGGGAATTCTCAGATGAGGAAGTTGACTGGCTTATGCTGTAATTTAGTTCGTTAAGGTGATGATCGTTGGTTTTTGATGTGTGATTATGTTTTTTTGTTGGCTTTGATGTTTTGTTTTACATAAGATTTTGTGTTCTTGAAAGGATGGAACCTTTCTACCTCTAAGGTAGGGGTAACGTTTCCATACAGTCTACCCTCTTCAGACTCCACTTTACGGGACTACAGTGATTACTTTTTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTCCCTTTGTTGTAATTGTAAGAGCTTGATCATTACAAATGCTTTGCTGTCTGCTTTGCTTCTTAATTTTGTACGACCTAGGTTCTTTTTTTTCCTACTCAAATACCCCAAACTTGTAATCTAATCATCCCTAAATAGTGTGTAGTGTTTGTTCTTATTAGTTTGATATTGGGCCATTGACTTGCATGATATTAATTAAATTTTAGTAGTGTGGTGTACCCCTTTTGTGCTTGAAATCTCTCTGTACTCTATCTGCTAATGGTGTTATAGATTGGTTACTTGTTTAGTGGTTTCTAATTGATAAGTCTGAGAAGTTAACAGCTTTCTATTGTACTTAGATACCAAGGTAGTCGATATTGATTTGTCTTGTGTTGCTAAGAAATTACCCTTAAGGATTTTAAGATGATACCAAAACTTTTAAAATTTTCTGTAACTTTTGCCTTCTGTAGATTTTCGAGGAAGCTGAATTAAGCTGCATTAGGGTTTCTCAATGATGTGCTTGGCTGCCTAGATTTATGTCTCCTGACTTATGTTTCAAAATGCTTAATCATGATGTTTATGCAGATTATTGCTTTTGGCAGGTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAGGTATGTAAATGTGATCCTTTTTGGCCATTTACTACTTCCAATACTTTGGTATATCTGCTTCCTCTTTGGTTGTTTTGTTTCCTTGGAATCTATATGTTTATATTGTGTTGGAATGGACAGAACTTTGTAACTATCTTACGAGTAGTTCGGCTTTTATTTGACTTACTTCTTAAATATTAGGACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTCAGATGATGGTAAGTGTTTTTCTGATGTATCAAGCTCTCAGATTATACGACAAGATGATATGGTCGGGGAGGAACAACCACTTGCTAAGGGATCAAGTTCATTTTTGGATAATTTGTCTACATCACAACTCACGGCCTCTATTAATG-AAAAAATGTTTGATACTTCTCCTGATGCTATCAACTGTATTTCTAATGTATCAAGTAGTCAAATGGTTTTGCAACGGAACATCACTAGGGAGGTGGAACCTGTCACTGATCAATCAATTTCCTTTGGAGATATGGCTCTATCAAAGTCATTATCATTTTCAATGGAGGAAAGTGAAGGAAATCCCACCATGACTAAGTTACAACGTCCAACTTCAGTTTATGATACAGAACTTAGGACCAACCCAGAGGATGAGAGCATTTCCAATGCTTCAATAACTCTGACGAATTTGCAAGACAATATCATCAGTGAGGATCGACTTGCATCCAAGGAATCAAGTTTTGTCAAAGATAAAAGTTTGCCACTAACCCCAGCATTTGCATCTGTTATACCTCCTTCACGAAATGATGCAGGATTTGGGGCGTCCATTGCCGCGAGTAAGAGTTTTTTGGGTGATGTTACTTTTGTATCTGAAGAGTCTAGTACAACCTTGGCATTAGAAGATGCTCCAAGCGCACTTCAGTCATCTGAACTTGTACTTTCTCGTGTTATGGAGAACAAAAGTATGGATGTTGACACTGGAATATCAAACTGTTCTCTGTTAAAAGAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGTTTCTGCCAATCCAGTTCTCTCAAGTACTCTGTTGACAGATTTCAGTGGTAAGTGGATTCCTCTTTCAACCCTCTGGTCTAGTAGTAAACGATAAACAATGTCCAGTTTTTTGTTCTCTCTGTTTCTACTTTCTTTTTTCTTTCTATTGTATCCATTGCTTCAATAGATTTCTCCTTTTGCAGAAGTAAATGCCTCTAGTTCTCACGAGTTGGTTGGAAATGGTAGGTCCGTTCAAAATGACCTCGAGTGTTGTCCAAGCCCTCAGCTGATATATCCCGCAGAAATAGGTACTATATGGAGGAACTTTGTTTTTTTCTTCTTTCTCTCCTTTGAAATTCGTGTGTTTCTAACAAAGTCACAATCAAACTACGGCAATGTAGCTGAGATGATGATGCATGTATTAAACGATGAGAATAATGAGAAATGAGTGCAAACTCAGTTCTTTGCTGCAATACATGCTTACTACGTAGTAGTTGATTGCCTGTGTGTGCTGCAGGGATGCTATAACATATCATTTTCCCGGAAGGAGAGTTCACAGTTTAATTGTGGGTTTGAAAATTTGAGCTCTATAAGGCAGCATCATATGATCAAAATGAAATTAATCAGTCCCATATTTTCCTTGTTCTCCTCCCCTCCCATATAAAAAAGAAATGAAAAAGGAAATTTGAGGGTGAAGGGATGATACTGACTCGAATGCTTTGTCTACTTCTTTTCAGTATACCGAAATGAATATTGTTGGATCAGCTGTATCTCTGCGAGTATAAGACTTATGGAAGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTG</genome_strand>
        <mrna_strand>GACTGTGCTTGTCACCATTAATAATATTTTTTCTCTTTTTATATGTATATGCATCTCCTTCATCTTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAG....................................................................................................................................................................................GACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGGGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTCAGATGATGGTAAGTGTTTTTCTGATGTATCAAGCTCTCAGATTATACGACAAGATGATATGGTCGGGGAGGAACAACCACTTGCTAAGGGATCAAGTTCATTTTTGGATAATTTGTCTACATCACAACTCACGGCCTCTATTAATGAAAAAAATGTTTGATACTTCTCCTGATGCTATCAACTGTATTTCTAATGTATCAAGTAGTCAAATGGTTTTGCAACGGAACATCACTAGGGAGGTGGAACCTGTCACTGATCAATCAATTTCCTTTGGAGATATGGCTCTATCAAAGTCATTATCATTTTCAATGGAGGAAAGTGAAGGAAATCCCACCATGACTAAGTTACAACGTCCAACTTCAGTTTATGATACAGAACTTAGGACCAACCCAGAGGATGAGAGCATTTCCAATGCTTCAATAACTCTGACGAATTTGCAAGACAATATCATCAGTGAGGATCGACTTGCATCCAAGGAATCAAGTTTTGTCAAAGATAAAAGTTTGCCACTAACCCCAGCATTTGCATCTGTTATACCTCCTTCACGAAATGATGCAGGATTTGGGGCGTCCATTGCCGCGAGTAAGAGTTTTTTGGGTGATGTTACTTTTGTATCTGAAGAGTCTAGTACAACCTTGGCATTAGAAGATGCTCCAAGCGCACTTCAGTCATCTGAACTTGTACTTTCTCGTGTTATGGAGAACAAAAGTATGGATGTTGACACTGGAATATCAAACTGTTCTCTGTTAAAAGAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGTTTCTGCCAATCCAGTTCTCTCAAGTACTCTGTTGACAGATTTCAGTG.......................................................................................................................................AAGTAAATGCCTCTAGTTCTCACGAGTTGGTTGGAAATGGTAGGTCCGTTCAAAATGACCTCGAGTGTTGTCCAAGCCCTCAGCTGATATATCCCGCAGAAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E594862" ref_strand="+" ref_description="SGN-E594862 [38122]">
      <seq>ggatgctgaaacgagccagcaccgttgagctctctcaattaccttctcttccttcaccatgtttacactcgatggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagcctttttttcctgtgaaaacaaccccatgataataatttctgctgagaattctctctttgtaaaggttccgcgataacggttagcataattgagctaatcattagtcctattgtgagataaatggtagaaactacatcttatttttccctttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="23290" stop="22399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22990" g_stop="22698" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E594862" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>293</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E594862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22990" e_stop="22698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGCTGAAACGAGCCAGCA-CGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCC-TTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAAC</genome_strand>
        <mrna_strand>GGATGCTGAAACGAGCCAGCACCGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCGATGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAATTCTCTCTTTGTAAAGGTTCCGCGATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTATTGTGAGATAAATGGTAGAAACTACATCTTATTTTTCCCTTTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E236522" ref_strand="+" ref_description="SGN-E236522 [cLED-13-I5]">
      <seq>agaataaaagggttgtgggatttcactagaggaacctctgtggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatgataataatttctgctgagaagtctctctttgtaaaggttccgctataacggttagcataattgagctaatcattagtcctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24134" stop="22454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23834" g_stop="23793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="191" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23070" g_stop="22754" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="508" r_length="317" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E236522" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23834" e_stop="23793"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22754"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACT</genome_strand>
        <mrna_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E231338" ref_strand="+" ref_description="SGN-E231338 [cLED-10-N17]">
      <seq>agaataaaagggttgtgggatttcactagaggaacctctgtggatgtatgaatgatagctccattgatcttccgggcatggaaacaattgatctaactgataaggaattgcccaaggaaagttgtgccttcattgactacaaattacaccatctcgtttcttctaggccaagaaaatataagtcgtacaaggaattgatacaggaggcatttgctcctcgaaagagaagaataaaggaatacgagcaattggctgttttgtatgcagacgtggatgctgaaacgagccagcacgttgagctctctcaattaccttctcttccttcaccatgtttacactcaacggaatcgtccacatgcaacatctgtgaacctgagtgggagctcctgtaaatgagccttttttcctgtgaaaacaaccccatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="24134" stop="22536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23834" g_stop="23793" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23300" g_stop="23152" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="191" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23070" g_stop="22836" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="426" r_length="235" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E231338" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23834" e_stop="23793"/>
          <exon e_start="23300" e_stop="23152"/>
          <exon e_start="23070" e_stop="22836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTGGTTCGTGCTGCTCCTCTTGGACTCTATTTTAACCTATGGCCTTCGACATAACCTATGTTCTTTTTTCTTTATTTTTTGCGTCCGGGTATATTGTTGTTGAAGAATAAAAGGATTGTTCTTTTATAGAATTGACAGAAGATTTCTGGATGATATTCCTTCTTCAGAAAGATCATACCAGTTGATCGCTACTTCATTTAATATTGTATCCTCATCATTTCATAGAACGCATAGTATTTTGAGATTTAATATCAGTATTTGGCCAAGTCTACCTGAATAAGGTTTGATCTGTTTCATGGAGGTATAAATTAGCGAGGATTGATGCGGATCCATTAGAAAAAATTTGGTGGTTTATAGGTTGGGAGTAAATAACGTGGAATTATACATGGTCATGGATACTACTTTCTTCAGATTGGTGGCTTGCTTCTCAAATTTGAGCATCTGTATCTTTGCTTTTCATCTGAGATCTACTTACTGCTTGATGTATTTTTGCAGGATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAGGTAACGTCTCTATTTATAAGCTTCCCTTCTACTTCAAATCCTGAACTCAATTAACGTTCAACTTTATCTGCTATACTACAGGAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGA</genome_strand>
        <mrna_strand>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG.................................................................................GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E260886" ref_strand="+" ref_description="SGN-E260886 [cLEG-55-I4]">
      <seq>ctaatgtatcaagtagtcaaatggttttgcaacggaacatcactagggaggtggaacctgtcactgatcaatcaatttcctttggagatatggctctatcaaagtcattatcattttcaatggaggaaagtgaaggaaatcccaccatgactaagttacaacgtccaacttcagtttatgatacagaacttaggaccaacccagaggatgagagcatttccaatgcttcaataactctgacgaatttgcaagacaatatcatcagtgaggatcgacttgcatccaaggaatcaagttttgtcaaagataaaagtttgccactaaccccagcatttgcatctgttatacctccttcacgaaatgatgcaggatttggggcgtccattgccgcgagtaagagttttttgggtgatgttacttttgtatctgaagagtctagtacaaccttggcattagaagatgctccaagcgcacttcagtcatctgaacttgtactttctcgtgttatggagaacaanagtatggatgttgacactggaatatcaaactgttctctgttaaaagaatcttcaagcctgtcaacttcctcaattggaaactgtatgcangaagccgagtctgatttaagtatcttcactggccactcatctgccttgcctacttccttagtgagtgcaaacaatgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="25596" stop="24309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25296" g_stop="24609" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="688" r_length="688" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E260886" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25296" e_stop="24609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGTATCAAGTAGTCAAATGGTTTTGCAACGGAACATCACTAGGGAGGTGGAACCTGTCACTGATCAATCAATTTCCTTTGGAGATATGGCTCTATCAAAGTCATTATCATTTTCAATGGAGGAAAGTGAAGGAAATCCCACCATGACTAAGTTACAACGTCCAACTTCAGTTTATGATACAGAACTTAGGACCAACCCAGAGGATGAGAGCATTTCCAATGCTTCAATAACTCTGACGAATTTGCAAGACAATATCATCAGTGAGGATCGACTTGCATCCAAGGAATCAAGTTTTGTCAAAGATAAAAGTTTGCCACTAACCCCAGCATTTGCATCTGTTATACCTCCTTCACGAAATGATGCAGGATTTGGGGCGTCCATTGCCGCGAGTAAGAGTTTTTTGGGTGATGTTACTTTTGTATCTGAAGAGTCTAGTACAACCTTGGCATTAGAAGATGCTCCAAGCGCACTTCAGTCATCTGAACTTGTACTTTCTCGTGTTATGGAGAACAAAAGTATGGATGTTGACACTGGAATATCAAACTGTTCTCTGTTAAAAGAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGT</genome_strand>
        <mrna_strand>CTAATGTATCAAGTAGTCAAATGGTTTTGCAACGGAACATCACTAGGGAGGTGGAACCTGTCACTGATCAATCAATTTCCTTTGGAGATATGGCTCTATCAAAGTCATTATCATTTTCAATGGAGGAAAGTGAAGGAAATCCCACCATGACTAAGTTACAACGTCCAACTTCAGTTTATGATACAGAACTTAGGACCAACCCAGAGGATGAGAGCATTTCCAATGCTTCAATAACTCTGACGAATTTGCAAGACAATATCATCAGTGAGGATCGACTTGCATCCAAGGAATCAAGTTTTGTCAAAGATAAAAGTTTGCCACTAACCCCAGCATTTGCATCTGTTATACCTCCTTCACGAAATGATGCAGGATTTGGGGCGTCCATTGCCGCGAGTAAGAGTTTTTTGGGTGATGTTACTTTTGTATCTGAAGAGTCTAGTACAACCTTGGCATTAGAAGATGCTCCAAGCGCACTTCAGTCATCTGAACTTGTACTTTCTCGTGTTATGGAGAACAANAGTATGGATGTTGACACTGGAATATCAAACTGTTCTCTGTTAAAAGAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCANGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E248109" ref_strand="+" ref_description="SGN-E248109 [cLEF-47-J16]">
      <seq>aagttttactctggtgtggtgccagagtgttcttatccctgtggacagtcatgtaaaaaaagaagcacaggctgtcaatgagaagccaaagcacgccagtgacactcatactagttcagtggccaacactactcagaaccctatccaagagaaatcatgtcagaatcagaattcccttgaaagtcatgctgcttcaacttcaactgaacttgatggtgtagcttctgaagaagcagaaattgatctttctgtaggaaatgagtgtgccactgcgatttgtaagaactcatgtaatgtttttaaagagaatatgacaagggaggaagcactggtagttgacaaaccaagtacttcagaagacagagtttcatctgaatcctgttctgacaaagattcgaaagataccatgtgctatagcttttcagatgatggtaagtgtttttctgatgtatcaagctctcagattatacgacaagatgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="26206" stop="25126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25906" g_stop="25426" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E248109" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25906" e_stop="25426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTTACTCTGGTGTGGTGCCAGAGT-TTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTCAGATGATGGTAAGTGTTTTTCTGATGTATCAAGCTCTCAGATTATACGACAAGATGATA</genome_strand>
        <mrna_strand>AAGTTTTACTCTGGTGTGGTGCCAGAGTGTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTCAGATGATGGTAAGTGTTTTTCTGATGTATCAAGCTCTCAGATTATACGACAAGATGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E544556" ref_strand="+" ref_description="SGN-E544556 [TUS-66-P5]">
      <seq>ctttttagctcagtgcttttgcttcagcgtttaatctttgcctattgatcaaatttatgtcttctttgtgcatcttcggtgacactgctattttggataaagacattgcctagtctttaaatgatcatgaagtgttatcaggatatagtttcctgattgattcatagattgcaccaatggagaaatccagaagcaaaagttgggttgggagcatttaccacaagtttgaggttgtgtgtcaggaggtcgatgaatttgtaactaaggacacagttaagtatgtcgagaatcaggtgcaaactgttggtgcaaacatgaaaaagttttactctggtgtggtgccagagtttcttatccctgtggacagtcatgtaaaaaaagaagcacaggctgtcaatgagaagccaaagcacgccagtgacactcatactagttcagtggccaacactactcagaaccctatccaagagaaatcatgtcagaatcagaattcccttgaaagtcatgctgcttcaacttcaactgaacttgatggtgtagcttctgaagaagcagaaattgatctttctgtaggaaatgagtgtgccactgcgatttgtaagaactcatgtaatgtttttaaagagaatatgacaagggaggaagcactggtagttgacaaaccaagtacttcagaagacagagtttcatctgaatcctgttctgacaaagattcgaaagatacatgtgctatagcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="28293" stop="25185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27993" g_stop="27916" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27915" i_stop="26329" i_length="1587">
            <donor d_prob="0.257" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26328" g_stop="26141" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="266" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26140" i_stop="25961" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25960" g_stop="25485" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="741" r_length="475" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E544556" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27993" e_stop="27916"/>
          <exon e_start="26328" e_stop="26141"/>
          <exon e_start="25960" e_stop="25485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCGGTATGTTTTCGTATTTGAGTCAACTGAATTTGGGTTTTTTTTTGTTTTTGGTTCTTTGAGAAGCCCTTATTTTTTTGGGGCCTAAAGCCCTTGTAGAGGATATGGGTAATTTTTTTCTTTTGTTTGTTTGGTTGGAATTGAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTGTTTTTTGGGAATTCTCAGATGATAAAGTTGACTGATTTCTACTGTAATTTAGTTCATTAAGCTGCTGATCATTGGTTTTTGATGTGTGATTATGCTTTTTTTTTCCTTGGCTTTGATGTTTTGTTTACATAAGGTATTGTGTTCCTGTAAAGATAGGATCTTTCTACCTTTAGGGTACGGGTAAGGTCTGTGTAGACCGCACTAAAGTGGTTATGCTGTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTTCCTATCTTGTTATTTCAAGAGCTTGATCATTACAAATGCTTACACCCCAAACTTGTAATCGATTCGTCCCCTAATAGTGTGTTGTATTTGTTCTTGTTACGTTGATATTGGGCCATCGAATTGCACGATATTAATTCGACTTTTAATGGTGTGATGGACCCCTTTGTGCTTGAAATCTCTATGTACTCTATCTGATACTTTTTTTCTTGGTGTATACTGTAGTTAAGGATATGGGTAATTTTTTTCTTTTGTTTGGTTAGTATAGAAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTTTTTTGGGAATTCTCAGATGAGGAAGTTGACTGGCTTATGCTGTAATTTAGTTCGTTAAGGTGATGATCGTTGGTTTTTGATGTGTGATTATGTTTTTTTGTTGGCTTTGATGTTTTGTTTTACATAAGATTTTGTGTTCTTGAAAGGATGGAACCTTTCTACCTCTAAGGTAGGGGTAACGTTTCCATACAGTCTACCCTCTTCAGACTCCACTTTACGGGACTACAGTGATTACTTTTTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTCCCTTTGTTGTAATTGTAAGAGCTTGATCATTACAAATGCTTTGCTGTCTGCTTTGCTTCTTAATTTTGTACGACCTAGGTTCTTTTTTTTCCTACTCAAATACCCCAAACTTGTAATCTAATCATCCCTAAATAGTGTGTAGTGTTTGTTCTTATTAGTTTGATATTGGGCCATTGACTTGCATGATATTAATTAAATTTTAGTAGTGTGGTGTACCCCTTTTGTGCTTGAAATCTCTCTGTACTCTATCTGCTAATGGTGTTATAGATTGGTTACTTGTTTAGTGGTTTCTAATTGATAAGTCTGAGAAGTTAACAGCTTTCTATTGTACTTAGATACCAAGGTAGTCGATATTGATTTGTCTTGTGTTGCTAAGAAATTACCCTTAAGGATTTTAAGATGATACCAAAACTTTTAAAATTTTCTGTAACTTTTGCCTTCTGTAGATTTTCGAGGAAGCTGAATTAAGCTGCATTAGGGTTTCTCAATGATGTGCTTGGCTGCCTAGATTTATGTCTCCTGACTTATGTTTCAAAATGCTTAATCATGATGTTTATGCAGATTATTGCTTTTGGCAGGTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAGGTATGTAAATGTGATCCTTTTTGGCCATTTACTACTTCCAATACTTTGGTATATCTGCTTCCTCTTTGGTTGTTTTGTTTCCTTGGAATCTATATGTTTATATTGTGTTGGAATGGACAGAACTTTGTAACTATCTTACGAGTAGTTCGGCTTTTATTTGACTTACTTCTTAAATATTAGGACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTC</genome_strand>
        <mrna_strand>CTTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAG....................................................................................................................................................................................GACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATA-CATGTGCTATAGCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E307728" ref_strand="+" ref_description="SGN-E307728 [cLEY-16-I18]">
      <seq>tttttagctcagtgcttttgcttcagcgtttaatctttgcctattgatcaaatttatgtcttctttgtgcatcttcggtgacactgctattttggataaagacattgcctagtctttaaatgatcatgaagtgttatcaggatatagtttcctgattgattcatagattgcaccaatggagaaatccagaagcaaaagttgggttgggagcatttaccacaagtttgaggttgtgtgtcaggaggtcgatgaatttgtaactaaggacacagttaagtatgtcgagaatcaggtgcaaactgttggtgcaaacatgaaaaagttttactctggtgtggtgccagagtttcttatccctgtggacagtcatgtaaaaaaagaagcacaggctgtcaatgagaagccaaagcacgccagtgacactcatactagttcagtggccaacactactcagaaccctatccaagagaaatcatgtcagaatcagaattcccttgaaagtcatgctgcttcaacttcaactgaacttgatggtgtagcttctgaagaagcagaaattgatctttctgtaagaaatgagtgtgccactgcgatttgtaagaactcatgtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="28292" stop="25313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27992" g_stop="27916" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27915" i_stop="26329" i_length="1587">
            <donor d_prob="0.257" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26328" g_stop="26141" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="265" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26140" i_stop="25961" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25960" g_stop="25613" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="613" r_length="348" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E307728" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27992" e_stop="27916"/>
          <exon e_start="26328" e_stop="26141"/>
          <exon e_start="25960" e_stop="25613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCGGTATGTTTTCGTATTTGAGTCAACTGAATTTGGGTTTTTTTTTGTTTTTGGTTCTTTGAGAAGCCCTTATTTTTTTGGGGCCTAAAGCCCTTGTAGAGGATATGGGTAATTTTTTTCTTTTGTTTGTTTGGTTGGAATTGAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTGTTTTTTGGGAATTCTCAGATGATAAAGTTGACTGATTTCTACTGTAATTTAGTTCATTAAGCTGCTGATCATTGGTTTTTGATGTGTGATTATGCTTTTTTTTTCCTTGGCTTTGATGTTTTGTTTACATAAGGTATTGTGTTCCTGTAAAGATAGGATCTTTCTACCTTTAGGGTACGGGTAAGGTCTGTGTAGACCGCACTAAAGTGGTTATGCTGTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTTCCTATCTTGTTATTTCAAGAGCTTGATCATTACAAATGCTTACACCCCAAACTTGTAATCGATTCGTCCCCTAATAGTGTGTTGTATTTGTTCTTGTTACGTTGATATTGGGCCATCGAATTGCACGATATTAATTCGACTTTTAATGGTGTGATGGACCCCTTTGTGCTTGAAATCTCTATGTACTCTATCTGATACTTTTTTTCTTGGTGTATACTGTAGTTAAGGATATGGGTAATTTTTTTCTTTTGTTTGGTTAGTATAGAAATTAAAGTTGAGACCTTGTGATAGTTTAGTTCTTTTTTTGGGAATTCTCAGATGAGGAAGTTGACTGGCTTATGCTGTAATTTAGTTCGTTAAGGTGATGATCGTTGGTTTTTGATGTGTGATTATGTTTTTTTGTTGGCTTTGATGTTTTGTTTTACATAAGATTTTGTGTTCTTGAAAGGATGGAACCTTTCTACCTCTAAGGTAGGGGTAACGTTTCCATACAGTCTACCCTCTTCAGACTCCACTTTACGGGACTACAGTGATTACTTTTTTGTTGTTGAAAAGATTGAATCTTTGTTCATATTGTCCCTTTGTTGTAATTGTAAGAGCTTGATCATTACAAATGCTTTGCTGTCTGCTTTGCTTCTTAATTTTGTACGACCTAGGTTCTTTTTTTTCCTACTCAAATACCCCAAACTTGTAATCTAATCATCCCTAAATAGTGTGTAGTGTTTGTTCTTATTAGTTTGATATTGGGCCATTGACTTGCATGATATTAATTAAATTTTAGTAGTGTGGTGTACCCCTTTTGTGCTTGAAATCTCTCTGTACTCTATCTGCTAATGGTGTTATAGATTGGTTACTTGTTTAGTGGTTTCTAATTGATAAGTCTGAGAAGTTAACAGCTTTCTATTGTACTTAGATACCAAGGTAGTCGATATTGATTTGTCTTGTGTTGCTAAGAAATTACCCTTAAGGATTTTAAGATGATACCAAAACTTTTAAAATTTTCTGTAACTTTTGCCTTCTGTAGATTTTCGAGGAAGCTGAATTAAGCTGCATTAGGGTTTCTCAATGATGTGCTTGGCTGCCTAGATTTATGTCTCCTGACTTATGTTTCAAAATGCTTAATCATGATGTTTATGCAGATTATTGCTTTTGGCAGGTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAGGTATGTAAATGTGATCCTTTTTGGCCATTTACTACTTCCAATACTTTGGTATATCTGCTTCCTCTTTGGTTGTTTTGTTTCCTTGGAATCTATATGTTTATATTGTGTTGGAATGGACAGAACTTTGTAACTATCTTACGAGTAGTTCGGCTTTTATTTGACTTACTTCTTAAATATTAGGACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAAT</genome_strand>
        <mrna_strand>TTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAG....................................................................................................................................................................................GACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAAGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E412909" ref_strand="+" ref_description="SGN-E412909 [STM-17-C11]">
      <seq>tcaatccacagaggaagctacatgagaagcagaaggagccatgatggtgacactactattttggattaggtcattgcctagtctttaaatgatcgtgaagtatgatcagcatatagtctcctaattgattcatagattgcaccaatggagaaaagcagaagcaaaagttgggttgggaacatttaccacaagtttgaggctgtgtgtcaggaggttgatgaatttgtaactaaggacacagttaagtatgttgagaatcaggtgcaaactgttggtgcaaacatgaaaaagttttactctggtgtggtgccagattttcttatcccagtggatagtaatgtaaaaaaagatgcacaagctgtcaatgagaagccaaaccacgccattggcactcatactagttcagtggccaacactacgcagaaccctatccaagagaaatcatgtcagaatcagaattcccttgaaaggcatgttgctttaactttaactgaacttgatggtgtggtagcttctgaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="26629" stop="25387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26328" g_stop="26141" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="234" r_length="188" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26140" i_stop="25961" i_length="180">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25960" g_stop="25674" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="521" r_length="287" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E412909" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26328" e_stop="26141"/>
          <exon e_start="25960" e_stop="25674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAGGTATGTAAATGTGATCCTTTTTGGCCATTTACTACTTCCAATACTTTGGTATATCTGCTTCCTCTTTGGTTGTTTTGTTTCCTTGGAATCTATATGTTTATATTGTGTTGGAATGGACAGAACTTTGTAACTATCTTACGAGTAGTTCGGCTTTTATTTGACTTACTTCTTAAATATTAGGACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGC</genome_strand>
        <mrna_strand>GTGACACTACTATTTTGGATTAGGTCATTGCCTAGTCTTTAAATGATCGTGAAGTATGATCAGCATATAGTCTCCTAATTGATTCATAGATTGCACCAATGGAGAAAAGCAGAAGCAAAAGTTGGGTTGGGAACATTTACCACAAGTTTGAGGCTGTGTGTCAGGAGGTTGATGAATTTGTAACTAAG....................................................................................................................................................................................GACACAGTTAAGTATGTTGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGATTTTCTTATCCCAGTGGATAGTAATGTAAAAAAAGATGCACAAGCTGTCAATGAGAAGCCAAACCACGCCATTGGCACTCATACTAGTTCAGTGGCCAACACTACGCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGGCATGTTGCTTTAACTTTAACTGAACTTGATGGTGTGGTAGCTTCTGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E614811" ref_strand="+" ref_description="SGN-E614811 [64603]">
      <seq>tttttttttttttgcttacaagttacaaatgattgcatttccaagataaattctttcgtggtacaattgcgacatgtacttaaatagaaagaaaaaggaaatagtctcaatgaatacctaatctaattatacaaattccaggtcatatgtacagcttagaatataaatgaagtgaaaaagcttctaattccacacgctacggagcaaaatcctaaaaagtaataaactcagcagatataaggaagatagtcaaggaaatgtgatttaccatgatgagtttaactcagcttttacggtcatctattgtcgtaaaagtcattgttccatgtgtcgctgttgtgttcgcagatgaagaagagtcaacttgttttcccgagccagtagatagcgagcctgatgatgtattcttctgattcctgagactcactagatctgataacatgcctggctcagatatctcttcatcatccacttgcatctcaccagtcagcaatttcaccacagtggacatggatggtcggcttttgggcatgacttgggtgcataagagagacaccttcaagaatttgcaagcatcatcaacatcgaagtcatctcccaataaatgcatctaccaatttgaatgagctcccacttctttgaacaagtctccatgcctgccatttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="40079" stop="41331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40371" g_stop="41031" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E614811" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40371" e_stop="41031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGAAGCTTTATGCTTACAAGTTACAAATGATTGCATTTCCAA-AAAAAAACTCTCATGGTACAATTGCGACATTTACTTAAATAGAAAGAAAAAGGAAATAGTCTCAATGAATACCTAATCTAATTATACGTATTCCAGGTCATATGTACATCTTAAAATATAAATGAAGTGAAAAAGCTCCTAATTCCACACGCTATGGAGCAAAATCCTACAAAGAAATAAATTCAACAGATATAAGGAAGATAGTCGAGGAAATTTGATTTACCATGATGTGTTTGACTCAGCTTTTACGATCATCTATTGTAGTAAAAGTCATTGTTCCATGTGTCGCTGTTGTGTTCGCAGATGAAGAAGAATCAACTTGTTTACCCGAGCCAGCAGATAGCGTGTCTGATGATGTATTTTTCTGATTCCTGAGACTTACTAGATCGGATAACATGCCTGGCTCAGATATCTCTTCATCATTCACTTGCATCTCACCAGTCAGCAATTTCACCACAGTGGACATCGATGGTCGGCTTTTGGGCATGACTTGGGTGCATAAGAGAGACACCTTCAAGAATTTGCAAGCATCAACAACATCGAAGTCATCTCCCAAT-AATGCATCTACCAA-TTGAATGAGCTCCCCCTTC-TTGAAC-AGTCTCCATGCCTG-CATATCA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTGCTTACAAGTTACAAATGATTGCATTTCCAAGATAAATTCTTTCGTGGTACAATTGCGACATGTACTTAAATAGAAAGAAAAAGGAAATAGTCTCAATGAATACCTAATCTAATTATACAAATTCCAGGTCATATGTACAGCTTAGAATATAAATGAAGTGAAAAAGCTTCTAATTCCACACGCTACGGAGCAAAATCCTAAAAAGTAATAAACTCAGCAGATATAAGGAAGATAGTCAAGGAAATGTGATTTACCATGATGAGTTTAACTCAGCTTTTACGGTCATCTATTGTCGTAAAAGTCATTGTTCCATGTGTCGCTGTTGTGTTCGCAGATGAAGAAGAGTCAACTTGTTTTCCCGAGCCAGTAGATAGCGAGCCTGATGATGTATTCTTCTGATTCCTGAGACTCACTAGATCTGATAACATGCCTGGCTCAGATATCTCTTCATCATCCACTTGCATCTCACCAGTCAGCAATTTCACCACAGTGGACATGGATGGTCGGCTTTTGGGCATGACTTGGGTGCATAAGAGAGACACCTTCAAGAATTTGCAAGCATCATCAACATCGAAGTCATCTCCCAATAAATGCATCTACCAATTTGAATGAGCTCCCACTTCTTTGAACAAGTCTCCATGCCTGCCATTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E614309" ref_strand="+" ref_description="SGN-E614309 [64094]">
      <seq>caggaatcagaagaatacatcatcaggctcgctatctactggctcgggaaaacaagttgactcttcttcatctgcgaacacaacagcgacacatggaacaatgacttttacgacaatagatgaccgtaaaagctgagttaaactcatcatggtaaatcacatttccttgactatcttccttatatctgctgagtttattactttttaggattttgctccgtagcgtgtggaattagaagctttttcacttcatttatattctaagctgtacatatgacctggaatttgtataattagattaggtattcattgagactatttcctttttctttctatttaagtacatgtcgcaattgtaccacgaaagaatttatcttggaaatgcaatcatttgtaacttgtaagcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="41088" stop="40079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40788" g_stop="40374" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E614309" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40788" e_stop="40374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAATCAGAAAAATACATCATCAGACACGCTATCTGCTGGCTCGGGTAAACAAGTTGATTCTTCTTCATCTGCGAACACAACAGCGACACATGGAACAATGACTTTTACTACAATAGATGATCGTAAAAGCTGAGTCAAACACATCATGGTAAATCAAATTTCCTCGACTATCTTCCTTATATCTGTTGAATTTATTTCTTTGTAGGATTTTGCTCCATAGCGTGTGGAATTAGGAGCTTTTTCACTTCATTTATATTTTAAGATGTACATATGACCTGGAATACGTATAATTAGATTAGGTATTCATTGAGACTATTTCCTTTTTCTTTCTATTTAAGTAAATGTCGCAATTGTACCATGAGAG-TTTTTTTTTGGAAATGCAATCATTTGTAACTTGTAAGCATAAAGCTTC</genome_strand>
        <mrna_strand>CAGGAATCAGAAGAATACATCATCAGGCTCGCTATCTACTGGCTCGGGAAAACAAGTTGACTCTTCTTCATCTGCGAACACAACAGCGACACATGGAACAATGACTTTTACGACAATAGATGACCGTAAAAGCTGAGTTAAACTCATCATGGTAAATCACATTTCCTTGACTATCTTCCTTATATCTGCTGAGTTTATTACTTTTTAGGATTTTGCTCCGTAGCGTGTGGAATTAGAAGCTTTTTCACTTCATTTATATTCTAAGCTGTACATATGACCTGGAATTTGTATAATTAGATTAGGTATTCATTGAGACTATTTCCTTTTTCTTTCTATTTAAGTACATGTCGCAATTGTACCACGAAAGAATTTATCTTGGAAATGCAATCATTTGTAACTTGTAAGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E341404" ref_strand="+" ref_description="SGN-E341404 [cTOE-23-H21]">
      <seq>cgacatttacttaaatagaaagaaaaaggaaatagtctcaatgaatacctaatctaattatacgtattccaggtcatatgtacatcttaaaatataaatgaagtgaaaaagctcctaattccacacgctatggagcaaaatcctacaaagaaataaattcaacagatataaggaagatagtcgaggaaatttgatttaccatgatgtgtttgactcagcttttacgatcatctattgtagtaaaagtcattgttccatgtgtcgctgttgtgttcgcagatgaagaagaatcaacttgtttacccgagccagcagatagcgtgtctgatgatgtatttttctgattcctgagacttactagatcggataacatgcctggctcagatatctcttcatcattcacttgcatctcaccagtcagcaatttcaccacagtggacatcgatggtcggcttttgggcatgacttgggtgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="40139" stop="41214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40439" g_stop="40914" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E341404" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40439" e_stop="40914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACATTTACTTAAATAGAAAGAAAAAGGAAATAGTCTCAATGAATACCTAATCTAATTATACGTATTCCAGGTCATATGTACATCTTAAAATATAAATGAAGTGAAAAAGCTCCTAATTCCACACGCTATGGAGCAAAATCCTACAAAGAAATAAATTCAACAGATATAAGGAAGATAGTCGAGGAAATTTGATTTACCATGATGTGTTTGACTCAGCTTTTACGATCATCTATTGTAGTAAAAGTCATTGTTCCATGTGTCGCTGTTGTGTTCGCAGATGAAGAAGAATCAACTTGTTTACCCGAGCCAGCAGATAGCGTGTCTGATGATGTATTTTTCTGATTCCTGAGACTTACTAGATCGGATAACATGCCTGGCTCAGATATCTCTTCATCATTCACTTGCATCTCACCAGTCAGCAATTTCACCACAGTGGACATCGATGGTCGGCTTTTGGGCATGACTTGGGTGCAT</genome_strand>
        <mrna_strand>CGACATTTACTTAAATAGAAAGAAAAAGGAAATAGTCTCAATGAATACCTAATCTAATTATACGTATTCCAGGTCATATGTACATCTTAAAATATAAATGAAGTGAAAAAGCTCCTAATTCCACACGCTATGGAGCAAAATCCTACAAAGAAATAAATTCAACAGATATAAGGAAGATAGTCGAGGAAATTTGATTTACCATGATGTGTTTGACTCAGCTTTTACGATCATCTATTGTAGTAAAAGTCATTGTTCCATGTGTCGCTGTTGTGTTCGCAGATGAAGAAGAATCAACTTGTTTACCCGAGCCAGCAGATAGCGTGTCTGATGATGTATTTTTCTGATTCCTGAGACTTACTAGATCGGATAACATGCCTGGCTCAGATATCTCTTCATCATTCACTTGCATCTCACCAGTCAGCAATTTCACCACAGTGGACATCGATGGTCGGCTTTTGGGCATGACTTGGGTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E318323" ref_strand="+" ref_description="SGN-E318323 [cTOA-29-E23]">
      <seq>ttcttttttctgtgggttgacctgcttttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccgtcacaaccatgtagtagaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaacaaaatagggaaaggagggtttggttctgtctacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtatggttgttgtgcggaaggggatcatagaatattggtgtataactacctggaaaataatagtctttcccaaactctgcttggtggtgcacatagtagcctccagtttagctggataacacgaactaagatatgcattggtgttgcacgaggacttgcattcctccacgaagaagtccagccttatatagttcatagagacattaaagcaagtaacatacttctcgacaaagaccttaccccaaaaatttcagattttggtcttgctaagcttattccagctgatttgacccatgttagcacccgtgtggcaggaacactangttatttggcccctgaatatgcaatgagagggcagttgacacggaaagcagatgtatacagttttgggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43775" stop="41473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43475" g_stop="43345" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42912" g_stop="42797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="247" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42715" g_stop="42505" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="458" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42414" g_stop="42177" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="696" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42176" i_stop="41846" i_length="331">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41845" g_stop="41773" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="769" r_length="73" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E318323" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43475" e_stop="43345"/>
          <exon e_start="42912" e_stop="42797"/>
          <exon e_start="42715" e_stop="42505"/>
          <exon e_start="42414" e_stop="42177"/>
          <exon e_start="41845" e_stop="41773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTGGTGAGTTTAAGTCTGTTGTCATTGTTTTTTTTTTAACTATTCTTTGATTTGTACTTGTGGCAGTGGATGCTGATGTTTGTTTACTCACAGGTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACTGTAAGTTTACATATTCTTATGCTTTTCTTTTATCTTCTTAGATAAATTTCTCTAGGTGAATTATAGGTTATGAATTAAAATGTGTAAGCCATTCAGAAACAATTGGGAATGTTTTGGCTAAGAATATCCAAAGAACAAGATGATGACTCATTGGCATTATCTTGTTCCTATTTATAGAGCTCCCATTTTTCCTGATCTAGCAATGTTGTAAAAGAAAATGTAGAAAAGCTATTGATAGTCTTATGCTACGTTCAGCTAAAACTGGAAATAGTATATCATTATCTACTTGTTTTTTATTGTGTATAAATTCTAACGTGCTTATTTATTGTAGAGGTTATTTGGCCCCTGAATATGCAATGAGAGGGCAGTTGACACGGAAAGCAGATGTATACAGTTTTGGGATT</genome_strand>
        <mrna_strand>TTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG..........................................................................................GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACT...........................................................................................................................................................................................................................................................................................................................................ANGTTATTTGGCCCCTGAATATGCAATGAGAGGGCAGTTGACACGGAAAGCAGATGTATACAGTTTTGGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E342761" ref_strand="+" ref_description="SGN-E342761 [cTOF-7-G2]">
      <seq>aagatttttgccctgtaaacaaaatagggaaaggagggtttggttctgtctacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtatggttgttgtgcggaaggggatcatagaatattggtgtataactacctggaaaataatagtctttcccaaactctgcttggtggtgcacatagtagcctccagtttagctggataacacgaactaagatatgcattggtgttgcacgaggacttgcattcctccacgaagaagtccagccttatatagttcatagagacattaaagcaagtaacatacttctcgacaaagaccttaccccaaaaatttcagattttggtcttgctaagcttattccagctgatttgacccatgttagcacccgtgtggcaggaacactaggttatttggcccctgaatatgcaatgagagggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43152" stop="41511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42852" g_stop="42797" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42715" g_stop="42505" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="267" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42414" g_stop="42177" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="505" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42176" i_stop="41846" i_length="331">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41845" g_stop="41811" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="540" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E342761" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42852" e_stop="42797"/>
          <exon e_start="42715" e_stop="42505"/>
          <exon e_start="42414" e_stop="42177"/>
          <exon e_start="41845" e_stop="41811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTGGTGAGTTTAAGTCTGTTGTCATTGTTTTTTTTTTAACTATTCTTTGATTTGTACTTGTGGCAGTGGATGCTGATGTTTGTTTACTCACAGGTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACTGTAAGTTTACATATTCTTATGCTTTTCTTTTATCTTCTTAGATAAATTTCTCTAGGTGAATTATAGGTTATGAATTAAAATGTGTAAGCCATTCAGAAACAATTGGGAATGTTTTGGCTAAGAATATCCAAAGAACAAGATGATGACTCATTGGCATTATCTTGTTCCTATTTATAGAGCTCCCATTTTTCCTGATCTAGCAATGTTGTAAAAGAAAATGTAGAAAAGCTATTGATAGTCTTATGCTACGTTCAGCTAAAACTGGAAATAGTATATCATTATCTACTTGTTTTTTATTGTGTATAAATTCTAACGTGCTTATTTATTGTAGAGGTTATTTGGCCCCTGAATATGCAATGAGAGGGC</genome_strand>
        <mrna_strand>AAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG..........................................................................................GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACT...........................................................................................................................................................................................................................................................................................................................................AGGTTATTTGGCCCCTGAATATGCAATGAGAGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E318209" ref_strand="+" ref_description="SGN-E318209 [cTOA-29-F8]">
      <seq>ttcttttttctgtgggttgacctgcttttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccgtcacaaccatgtagtagaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaacaaaatagggaaaggagggtttggttctgtctacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtatggttgttgtgcggaaggggatcatagaatattggtgtataactacctggaaaataatagtctttcccaaactctgcttggtggtgcacatagtagcctccagtttagctggataacacgaactaagatatgcattggtgttgcacgaggacttgcattcctccacgaagaagtccagccttatatagttcatagagacattaaagcaagtaacatacttctcgacaaagaccttaccccaaaaatttcagattttggtcttgctaagcttattccagctgatttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43775" stop="41907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43475" g_stop="43345" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42912" g_stop="42797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="247" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42715" g_stop="42505" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="458" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42414" g_stop="42207" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="666" r_length="208" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E318209" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43475" e_stop="43345"/>
          <exon e_start="42912" e_stop="42797"/>
          <exon e_start="42715" e_stop="42505"/>
          <exon e_start="42414" e_stop="42207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTGGTGAGTTTAAGTCTGTTGTCATTGTTTTTTTTTTAACTATTCTTTGATTTGTACTTGTGGCAGTGGATGCTGATGTTTGTTTACTCACAGGTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGAC</genome_strand>
        <mrna_strand>TTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG..........................................................................................GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E408593" ref_strand="+" ref_description="SGN-E408593 [PPI-11-H9]">
      <seq>cttcaacaagattggcagcagagttcttttttctgttggttgacttgcccttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccctcacaaccgtgtagttgaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaagtgcgtgctgcaaccgaagatttttgccctgtaaataaaatagggaaaggagggtttggttctgtttacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtacggttgttgtgcggaaggggatcatagaatattggtgtataactacctggaaaacaatagtctttcccaaactctgcttggtggtgcacatagtagcctccagtttagctggataacacgaactaaaatatgcattggtgttgcacgaggacttgcattccttcacgaagaagcgcagccttatatagttcatagagacattaaagcaagtaacatccttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43794" stop="41972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43498" g_stop="43345" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42912" g_stop="42797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="266" r_length="116" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42715" g_stop="42505" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="477" r_length="211" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42414" g_stop="42272" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="620" r_length="143" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E408593" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43498" e_stop="43345"/>
          <exon e_start="42912" e_stop="42797"/>
          <exon e_start="42715" e_stop="42505"/>
          <exon e_start="42414" e_stop="42272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTAACAGGATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTGGTGAGTTTAAGTCTGTTGTCATTGTTTTTTTTTTAACTATTCTTTGATTTGTACTTGTGGCAGTGGATGCTGATGTTTGTTTACTCACAGGTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTC</genome_strand>
        <mrna_strand>CTTCAACAAGATTGGCAGCAGAGTTCTTTTTTCTGTTGGTTGACTTGC----CCTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCCTCACAACCGTGTAGTTGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAAGTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAATAAAATAGGGAAAGGAGGGTTTGGTTCTGTTTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTACGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAACAATAGTCTTTCCCAAACTCTGCTTG..........................................................................................GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAAATATGCATTGGTGTTGCACGAGGACTTGCATTCCTTCACGAAGAAGCGCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATCCTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E466703" ref_strand="+" ref_description="SGN-E466703 [cPRO-25-H8]">
      <seq>caagattggcagcagagttcttttttctgttggttgacttgcccttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccctcacaaccgtgtagttgaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaataaaatagggaaaggagggtttggttctgtttacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtacggttgttgtgcggaaggggatcatagaatattggtgtataactacctggaaaacaatagtctttcccaaactctgcttggtggtgcacatagtagcctccagtttagctggataacacgaactaaaatatgcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43792" stop="42058"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43492" g_stop="43345" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42912" g_stop="42797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="264" r_length="116" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42715" g_stop="42505" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="475" r_length="211" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42414" g_stop="42358" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="532" r_length="57" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E466703" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43492" e_stop="43345"/>
          <exon e_start="42912" e_stop="42797"/>
          <exon e_start="42715" e_stop="42505"/>
          <exon e_start="42414" e_stop="42358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTGGTGAGTTTAAGTCTGTTGTCATTGTTTTTTTTTTAACTATTCTTTGATTTGTACTTGTGGCAGTGGATGCTGATGTTTGTTTACTCACAGGTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTG</genome_strand>
        <mrna_strand>CAAGATTGGCAGCAGAGTTCTTTTTTCTGTTGGTTGACTTGCCCTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCCTCACAACCGTGTAGTTGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAATAAAATAGGGAAAGGAGGGTTTGGTTCTGTTTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTACGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAACAATAGTCTTTCCCAAACTCTGCTTG..........................................................................................GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAAATATGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E249113" ref_strand="+" ref_description="SGN-E249113 [cLEF-49-D14]">
      <seq>ttcaacaagattggcaggggaattcttttgtctgttttttaacctgcttttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccgtcacaaccatgtagtagaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaacaaaatagggaaaggagggtttggttctgtctacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtgaagttgtatggttgttgtgcggaaggggatcatagaatattggtgtataactacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43759" stop="42237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43497" g_stop="43345" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42912" g_stop="42797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="269" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42715" g_stop="42537" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="448" r_length="179" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E249113" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43497" e_stop="43345"/>
          <exon e_start="42912" e_stop="42797"/>
          <exon e_start="42715" e_stop="42537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAACAGGATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCT</genome_strand>
        <mrna_strand>TTCAACAAGATTGGCAGGGGAATTCTTTTGTCTGTTTTTTAACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E704165" ref_strand="+" ref_description="SGN-E704165 [FA23CB03]">
      <seq>ctgctgcctgcttcacaagattggcaggggagttcttttttctgtgggttgacctgcttttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttaggagggaaggcatctccccgtcacaaccatgtagtagaaattgatgaaggttaaaattttcagcgttttctcaacttttacttctctttatgtaaattgttgccagcttctatgataatatagcatacttgagcatgttgtcacaattaggattctttgttcttcttaagcatggacagacattgccttttccatacatgatttctccatagcgatccaagttgttgtggtctagtggtgtggaggagaaccacaaggtctcatgtttaaattccaattgaggccaaaaatcactaggtgccaccatcttcttatctgcctcgttggtgggcagagtcatctggtacctgtgttggtgggaggtagcaggtactcggtggaataatcgaggtgcagagtaccaccttcatataaatgatttaagttgttgcaattaatcaagacatgttaaggtttgtcactatatttagaattgttgcagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaacaaaatacggaaaggagggtttggttctgtctacaaggggaggctaagagatggaaaaatggctgctattaaggtactttctgttgaatcaaaacaaggtgtaaaggagtttttgacagaaataaaggtgatctcaaatatagaacatgaaaacctggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="43795" stop="42292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43489" g_stop="42797" g_length="693"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="711" r_length="693" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42715" g_stop="42592" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="835" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E704165" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43489" e_stop="42797"/>
          <exon e_start="42715" e_stop="42592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAGGTATTTTATTCTCCACAAAAAGAGTTTTTTGATTTTGCATTTCCATTCAATAAATAAGCTGACTTTATATTCTGTTGTTAGGGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGA</genome_strand>
        <mrna_strand>GATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATACGGAAAGGAGGGTTTGGTTCTGTCTACAAG.................................................................................GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E336656" ref_strand="+" ref_description="SGN-E336656 [cTOE-4-B16]">
      <seq>tcatctctcccaaagtcatctcttccattttcttctgctgcctgcttcaacaagattggcaggggagttcttttttctgtgggttgacctgcttttctttctgttgaaacaaaaacactggtgtaatgacttgttttggtctctgcttacgagggaaggcatctccccgtcacaaccatgtagtagaaattgatgaagaaatttcaaccattgagaatgcaagggtgtacagctaccgggaattgcgtgctgcaaccgaagatttttgccctgtaaacaaaataggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="44799" stop="42524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44499" g_stop="44447" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44446" i_stop="43490" i_length="957">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43489" g_stop="43345" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="198" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42912" g_stop="42824" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="287" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E336656" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44499" e_stop="44447"/>
          <exon e_start="43489" e_stop="43345"/>
          <exon e_start="42912" e_stop="42824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTCTCCCAAAGTCATCTCTTCCATTTTCTTCTGCTGCCTGCTTCAACAAGTAAGTAAATTCAATTTTGTGTCTTTTTCTCTTCAATTTCAACTTTCTTCTCTTCCCTGCAATTTCTCTACTTTAATTGAGCTTAGTTTACCTGTTTTTTACCTTCAAAACGAGCTAAATTTCAGCATTTTTGGAGTTTTTTTGTGCTTTTTGATTGATCAATCAGGTTAGTGATTTCTCTTTAGGCGGATCTGAAAAGAAGAAGTTAATGGATTGTTTTGGAGTACATACAGTTATTTGGGATGTAAAAGTTTGAATTTTTGCTCTTTTTTAAAGTAAAACTGGAAGTTTTTCGAACTAGCTGCGAAAATCTAGCTTCGTAACTGTTCAAGCTATGGATCTGGTTTTATGTTTGTTTTAATAAAAGGGGCATTTCTCTTATGGGAATCATATTTTATTTTACTAGTGCTGCAATTTTACTACAAAATTTTGAACTTTTTTCTTTGAAGCTTTGGATTGTTATTGATGTAATTGCTTTCTGTTTGTTTTGTTTGTATGCCGTGTTGAGTTTTGGAAATGGGTGTCTGGAATGTTGGTTTATCTCTCCTTGTTTTCGTTGTAATGTTAGATGTATTGTTAGTAGTGATGAAATGTAGGTTCTGAGCAGTAGGTTCAAAATTATGCTTGTTTGAGAATGTTTTTGGGGCTTGGTATAGAGGAAATAAGTGTATTACTTCTTATTCAATGCGTTTTTTGGGTAGAATTCAGGAGTATAGAGGCGTTTGTGGACGTTTGGCCATGTTTCATTGCAAAATTTGAAAAAAAATTAGTTTTTGTTTTCAAAAGTGAAATATGATATTTAAAATTGGAAACTGGAAGTTCAACTTTGGACAAAGTGAAAAATTTTCATGGCCAAACGCCTTAGGTAACCGTTATGTGTCATATCTGAACCAGCGCTTAATGGAACTAAATTTTGGTAATGAAGTGTTCTTGATATGTTGTTTTGTTATGTAACAGGATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGG</genome_strand>
        <mrna_strand>TCATCTCTCCCAAAGTCATCTCTTCCATTTTCTTCTGCTGCCTGCTTCAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTACGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E701591" ref_strand="+" ref_description="SGN-E701591 [FA16BF05]">
      <seq>tgattttgctttgccatttatttctgaaattttgggattattcttattcaggtgatgcgcccaaatcacagtgaagaatttgcatttgcggagcttaattcagtaaattggaccctcacgagtaagccacggattcttgtacctattgcaaatggttctgaggaaatggaagctactattattattgatgtacttcggcgagcaaacgctcaagtagttgtggcatctatggaagataaattggagattgttgcttccagaaaagttaaactagttgcagatgtgctccttgatgaagctgctaaacagtcttacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaagaagcagagggaatcaagcaaaccatatggagcaatgtgtgcatctccagctctagtcctagagccccatgggcttctccagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagtgaagcagaaaacagggtggtggtagatggaaatctcgttaccagcagaggaccaggaactaccatggagttcgcactggccattgcagataagtttattgggcacaaggaaacattagagctagcaaaggagatgattttctaagtatttaacttttttgccgctatgatccgtctttagcatcatatacactttgctatatgatggtgtaaacttgtagtataataaactttgctatatcactctgcacttacagctttgtttcggtgggtgttagttatcatgttgtattggggtggtagtttaaatacaaattatcttcaggtaatgacaaaaaagtctcaagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="52241" stop="49879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51941" g_stop="51810" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51311" g_stop="51111" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="333" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51034" g_stop="50894" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="474" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50582" g_stop="50179" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="878" r_length="404" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E701591" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51941" e_stop="51810"/>
          <exon e_start="51311" e_stop="51111"/>
          <exon e_start="51034" e_stop="50894"/>
          <exon e_start="50582" e_stop="50179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGGGTAAGATTGTGGCTGAGGGTTGCAGCTCTGTCAGTTTCTCTACGCAACCATTTATGTACTCAATATGTTAATCATTTCTCTGCAAGTGATCCACGTGGATTTTGCATATATTAAGATCTTCTACTCTCATGTGTATGTTGATACATTTTTTTAAGTATGTGTATGTTGATACATACATTGTTGAGCTGTAAAATGTTGTAGGAGAACTTCGTGAGTCATAAAAGCAAAAGATGAGGTATTCTATGCACATCCATGTATAACCACGTCCCCAGAGTAGTTAGCAAACTTTTGTGCAAACCATCATTGTTTACCTTTGGAAGTAATAGCAGTGTCCATGTCTAGGCAGAATGTTTAGCTTATGAAGTAACAGCAATATATTGTACTTATAGTATGTTATGAAATGTTCTTTCGAGTTTTGGAGCTGAATCACCACCATGTTAATATGCCAGTTCATAACTTGTCAAAAAGATATTAAGTTCTTAATATTTTGTTTGACAGATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAAGTCTCAAGTTTT</genome_strand>
        <mrna_strand>TGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGGTGTTAGTTATCATGTTGTATTGGGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAAGTCTCAAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E223890" ref_strand="-" ref_description="SGN-E223890 [cLEL-19-E3]">
      <seq>caatgtgtgcatctccagctctagtcctaaagccccatgggcttctccagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagtgaagcagaaaacagggtggtggtagatggaaatctcgttaccagcagaggaccaggaactaccatggagttcgcactggccattgcagataagtttattgggcacaaggaaacattagagctagcaaaggagatgattttctaagtatttaacttttttgccgctatgatccgtctttagcatcatatacactttgctatatgatggtgtaaacttgtagtataataaactttgctatatcactctgcacttacagctttgtttcggtggttgttagttatcatgttgtattgtggtggtagtttaaatacaaattatcttcaggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="51243" stop="49891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50943" g_stop="50894" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50582" g_stop="50191" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="442" r_length="392" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E223890" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223890" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="50943" e_stop="50894"/>
          <exon e_start="50582" e_stop="50191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAA</genome_strand>
        <mrna_strand>CAATGTGTGCATCTCCAGCTCTAGTCCTAAAGCCCCATGGGCTTCTCCAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E223779" ref_strand="-" ref_description="SGN-E223779 [cLEL-19-E3]">
      <seq>aatgtgtgcatctccagctctagtcctagagccccatgggcttctccagggtaaaaaggctactgccttcccagccttgtgcatcaggcctttccgatccaagtgaagcagaaaacagggtggtggtagatggaaatctcgttaccagcagaggaccaggaactaccatggagttcgcactggccattgcagataagtttattgggcacaaggaaacattagagctagcaaaggagatgattttctaagtatttaacttttttgccgctatgatccgtctttagcatcatatacactttgctatatgatggtgtaaacttgtagtataataaactttgctatatcactctgcacttacagctttgtttcggtggttgttagttatcatgttgtattgtggtggtagtttaaatacaaattatcttcaggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="51242" stop="49891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50942" g_stop="50894" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50582" g_stop="50191" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="442" r_length="393" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E223779" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223779" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="50942" e_stop="50894"/>
          <exon e_start="50582" e_stop="50191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACA-AACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAA</genome_strand>
        <mrna_strand>AATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTCCCAGCCTTGTGCATCAGGCCTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E576834" ref_strand="-" ref_description="SGN-E576834 [60115]">
      <seq>taaattggagattgttgcttccagaaaagttaaactagtagcagatgtgctccttgatgaagctgctaaacaatcgtacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaaaaagcagagggagtcaagcaaaccatatggagcaatgtgtgcatctccagctctagtcctagagccccatgggcttctcaagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagcgaagcagaaaacagggtggtggttgatggaaatctcgttaccagcagaggaccaggaactaccatggagttcgcactggccattgcagataagtttattgggcacaaggaaacattagagctagcaaaggagatgattttctaagtatttacttttttgcagctgtgttccgtctttagcatcatacacacacccatcgttgtaaacttgtagtataataaactttgctatatcagtgtgcacttacaactttgtttggatggttgttactcatcgtacgtattgtattgtgttagtttaaatacaatgtttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="51507" stop="49945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51207" g_stop="51111" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51034" g_stop="50894" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="238" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50582" g_stop="50208" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="607" r_length="369" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E576834" ref_strand="-">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576834" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="51207" e_stop="51111"/>
          <exon e_start="51034" e_stop="50894"/>
          <exon e_start="50582" e_stop="50208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCAT-GTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTT</genome_strand>
        <mrna_strand>TAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTAGCAGATGTGCTCCTTGATGAAGCTGCTAAACAATCGTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAAAAGCAGAGGGAGTCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCAAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGCGAAGCAGAAAACAGGGTGGTGGTTGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTT-ACTTTTTTGCAGCTGTGTTCCGTCTTTAGCATCATACACAC--ACCCAT-CG-T--TGTAAACTTGTAGTATAATAAACTTTGCTATATCAGTGTGCACTTACAACTTTGTTTGGATGGTTGTTACTCATCGTACGTATTGTATTGTGTTAGTTTAAATACAATGTTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E621775" ref_strand="+" ref_description="SGN-E621775 [72135]">
      <seq>tgacttgatgaagctgctaaacaatcgtacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaaaaagcagagggagtcaagcaaaccatatggagcaatgtgtgcatctccagctctagtcctagagccccatgggcttctcaagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagcgaagcagaaaacagggtggtggttgatggaaatctcgttaccagcagaggaccaggaactaccatggagttcgcactggccattgcagataagtttattgggcacaaggaaacattagagctagcaaaggagatgattttctaagtatttacttttttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="51455" stop="50068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51158" g_stop="51111" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51034" g_stop="50894" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="189" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50582" g_stop="50367" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="404" r_length="215" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E621775" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E621775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51158" e_stop="51111"/>
          <exon e_start="51034" e_stop="50894"/>
          <exon e_start="50582" e_stop="50367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCC</genome_strand>
        <mrna_strand>TGACTTGATGAAGCTGCTAAACAATCGTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAAAAGCAGAGGGAGTCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCAAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGCGAAGCAGAAAACAGGGTGGTGGTTGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTT-ACTTTTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E620530" ref_strand="+" ref_description="SGN-E620530 [71232]">
      <seq>ctgaaagcaacgtgttatccatcgtatatggaggaactatcatctcatgccattgctgttgagtcaagagtccaaaaggatgcgaaagttgtgacaagtcgtggaccagcaacatccatcgagtatgctgttgcattggttgaggagttgtatggaaaagagaaggctaatgaagtttctggtccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggaccttaattcagtaaattggacactcacgagtaagccacggattcttgtacctattgcaaatggttctgaggaaatggaagctactattattattgatgtacttcggcgagcaaatgctcaagtagttgtggcatctctggaagataaattggagattgttgcttccagaaaagttaaactagtagcagatgtgctccttgatgaagctgctaaacagtcgtacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaaaaagcaaagggagtcaagcaaaccatatggagcaatgtgtgcatctccagctctagtcctagaancccatgggcttctcaagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagcgaagcagaaaacagggtggtggttgatggaaatctcgttnacagcagaggaccaggaactaccatggagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="53614" stop="50157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53416" g_stop="53411" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="0.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53308" g_stop="53126" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="189" r_length="183" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51890" g_stop="51810" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="270" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51311" g_stop="51111" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="471" r_length="201" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51034" g_stop="50894" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="612" r_length="141" r_score="0.957"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50582" g_stop="50457" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="738" r_length="126" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E620530" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53416" e_stop="53411"/>
          <exon e_start="53308" e_stop="53126"/>
          <exon e_start="51890" e_stop="51810"/>
          <exon e_start="51311" e_stop="51111"/>
          <exon e_start="51034" e_stop="50894"/>
          <exon e_start="50582" e_stop="50457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGGGTAAGATTGTGGCTGAGGGTTGCAGCTCTGTCAGTTTCTCTACGCAACCATTTATGTACTCAATATGTTAATCATTTCTCTGCAAGTGATCCACGTGGATTTTGCATATATTAAGATCTTCTACTCTCATGTGTATGTTGATACATTTTTTTAAGTATGTGTATGTTGATACATACATTGTTGAGCTGTAAAATGTTGTAGGAGAACTTCGTGAGTCATAAAAGCAAAAGATGAGGTATTCTATGCACATCCATGTATAACCACGTCCCCAGAGTAGTTAGCAAACTTTTGTGCAAACCATCATTGTTTACCTTTGGAAGTAATAGCAGTGTCCATGTCTAGGCAGAATGTTTAGCTTATGAAGTAACAGCAATATATTGTACTTATAGTATGTTATGAAATGTTCTTTCGAGTTTTGGAGCTGAATCACCACCATGTTAATATGCCAGTTCATAACTTGTCAAAAAGATATTAAGTTCTTAATATTTTGTTTGACAGATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTC</genome_strand>
        <mrna_strand>CTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTATCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCGAAAGTTGTGACAAGTCGTGGACCAGCAACATCCATCGAGTATGCTGTTGCATTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGTCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGACCTTAATTCAGTAAATTGGACACTCACGAGTAAGCCACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAATGCTCAAGTAGTTGTGGCATCTCTGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTAGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCGTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAAAAGCAAAGGGAGTCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAANCCCATGGGCTTCTCAAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGCGAAGCAGAAAACAGGGTGGTGGTTGATGGAAATCTCGTTNACAGCAGAGGACCAGGAACTACCATGGAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E708106" ref_strand="+" ref_description="SGN-E708106 [FA34DE03]">
      <seq>ctatttacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcatgccattgctgttgagtcaagagtccaaaaggatgcaaaagttgtgacaagtcgtggaccggcaacatccatcgagtatgctgttgcgttggttgaggagttgtatggaaaagagaaggctaatgaagtttctggcccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggagcttaattcagtaaattggaccctcacgagtaagccacggattcttgtacctattgcaaatggttctgaggaaatggaagctactattattattgatgtacttcggcgagcaaacgctcaagtagttgtggcatctatggaagataaattggagattgttgcttccagaaaagttaaactagttgcagatgtgctccttgatgaagctgctaaacagtcttacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaagaagcagagggaatcaagcaaaccatatggagcaatgtgtgcatctccagctctagtcctagagccccatgggcttctccagggtaaaaaggctactgcctttccagccttgtgcaacaaactttccgatccaagtgaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="54667" stop="50224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54367" g_stop="54320" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="198" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53308" g_stop="53126" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="381" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51890" g_stop="51810" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="462" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51311" g_stop="51111" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="663" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51034" g_stop="50894" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="804" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50582" g_stop="50524" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="863" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E708106" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>863</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54367" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53126"/>
          <exon e_start="51890" e_stop="51810"/>
          <exon e_start="51311" e_stop="51111"/>
          <exon e_start="51034" e_stop="50894"/>
          <exon e_start="50582" e_stop="50524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGGGTAAGATTGTGGCTGAGGGTTGCAGCTCTGTCAGTTTCTCTACGCAACCATTTATGTACTCAATATGTTAATCATTTCTCTGCAAGTGATCCACGTGGATTTTGCATATATTAAGATCTTCTACTCTCATGTGTATGTTGATACATTTTTTTAAGTATGTGTATGTTGATACATACATTGTTGAGCTGTAAAATGTTGTAGGAGAACTTCGTGAGTCATAAAAGCAAAAGATGAGGTATTCTATGCACATCCATGTATAACCACGTCCCCAGAGTAGTTAGCAAACTTTTGTGCAAACCATCATTGTTTACCTTTGGAAGTAATAGCAGTGTCCATGTCTAGGCAGAATGTTTAGCTTATGAAGTAACAGCAATATATTGTACTTATAGTATGTTATGAAATGTTCTTTCGAGTTTTGGAGCTGAATCACCACCATGTTAATATGCCAGTTCATAACTTGTCAAAAAGATATTAAGTTCTTAATATTTTGTTTGACAGATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAGGTAAGAGACATACTCATGCTCTTCGATTTTGAAAGTAAAACTATTTTAAAGCAAGTGAATATTACCTCAAGTACTGTAATTTGTACATTACCTTGGTTTATCAGGATAAAAAAAGCCACGACTTAAAGGTCTTGATTGGCCTTAACCTTGATGAGCTAGGCTATATTGGTTCATCTAAATAGGTTCAAAAAAGCAACAGTATTATATTATTAAATATACAAGGGGCCTGTTGTTCCAAGTCTTGCAGCATAGCATGCTTTGCATTACACTATTTATGCATTTGACTGCTTTATTTCTGGTCTTCTATCCAGGGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGC</genome_strand>
        <mrna_strand>CTATTTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAG.......................................................................................................................................................................................................................................................................................................................GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E455249" ref_strand="+" ref_description="SGN-E455249 [cSTS-25-D8]">
      <seq>gaggaactatcatctcatgccattgctgttgagtcaagagtccaaaaggatgcgaaagttgtgacaagtcgtggaccagcaacatccatcgagtatgctgttgcattggttgaggagttgtatggaaaagagaaggctaatgaagtttctggcccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggaccttaattcagtaaattggacactcacgagtaagccacggattcttgtacctattgcaaatggttctgaggaaatggaagctactattattattgatgtacttcggcgagcaaacgctcaagtagttgtggcatctctggaagataaattggagattgttgcttccagaaaagttaaactagtagcagatgtgctccttgatgaagctgctaaacaatcgtacgatctcattgtcctaccaggcggtcttggtggtgccgaaacatttgccaaatcagaaaagttggttgacatgctgaaaaagcagagggagtcaagcaaaccatatggagcaatgtgtgcatctccagctctagtgctagagccccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="53584" stop="50606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53284" g_stop="53126" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51890" g_stop="51810" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="240" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51311" g_stop="51111" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="441" r_length="201" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51034" g_stop="50906" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="570" r_length="129" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E455249" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53284" e_stop="53126"/>
          <exon e_start="51890" e_stop="51810"/>
          <exon e_start="51311" e_stop="51111"/>
          <exon e_start="51034" e_stop="50906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGGGTAAGATTGTGGCTGAGGGTTGCAGCTCTGTCAGTTTCTCTACGCAACCATTTATGTACTCAATATGTTAATCATTTCTCTGCAAGTGATCCACGTGGATTTTGCATATATTAAGATCTTCTACTCTCATGTGTATGTTGATACATTTTTTTAAGTATGTGTATGTTGATACATACATTGTTGAGCTGTAAAATGTTGTAGGAGAACTTCGTGAGTCATAAAAGCAAAAGATGAGGTATTCTATGCACATCCATGTATAACCACGTCCCCAGAGTAGTTAGCAAACTTTTGTGCAAACCATCATTGTTTACCTTTGGAAGTAATAGCAGTGTCCATGTCTAGGCAGAATGTTTAGCTTATGAAGTAACAGCAATATATTGTACTTATAGTATGTTATGAAATGTTCTTTCGAGTTTTGGAGCTGAATCACCACCATGTTAATATGCCAGTTCATAACTTGTCAAAAAGATATTAAGTTCTTAATATTTTGTTTGACAGATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCAGTGAGTGCAATCCTCTGAAAATCTGCTTCTAAAGCTTCTTGAAGTTCTTGTCTTACTGTAATATATGAATATGCAGGGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCAT</genome_strand>
        <mrna_strand>GAGGAACTATCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCGAAAGTTGTGACAAGTCGTGGACCAGCAACATCCATCGAGTATGCTGTTGCATTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGACCTTAATTCAGTAAATTGGACACTCACGAGTAAGCCACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTCTGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTAGCAGATGTGCTCCTTGATGAAGCTGCTAAACAATCGTACGATCTCATTGTCCTACCA............................................................................GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAAAAGCAGAGGGAGTCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTGCTAGAGCCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E729833" ref_strand="+" ref_description="SGN-E729833 [LA22BA07]">
      <seq>ctcaaacttattataaaaatggcagcaccaattttgcgacacctcactactcctttccctgcctttgtaaaactcaacgaaacccccaaaattcaatcatttttcactctctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttccgctactaagaaggtattggttccgattgcgaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcatgccattgctgttgagtcaagagtccaaaaggatgcaaaagttgtgacaagtcgtggaccggcaacatccatcgagtatgctgttgcgttggttgaggagttgtatggaaaagagaaggctaatgaagtttctggcccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggagcttaattcagtaaattggaaccctcacgagtaagccacgggattcttgtacctattgcaaatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55099" stop="50988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54799" g_stop="54611" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="390" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="540" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53126" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="723" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51890" g_stop="51809" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="806" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51808" i_stop="51312" i_length="497">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51311" g_stop="51288" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="830" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E729833" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54799" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53126"/>
          <exon e_start="51890" e_stop="51809"/>
          <exon e_start="51311" e_stop="51288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGG-ACCCTCACGAGTAAGCCACGGGTAAGATTGTGGCTGAGGGTTGCAGCTCTGTCAGTTTCTCTACGCAACCATTTATGTACTCAATATGTTAATCATTTCTCTGCAAGTGATCCACGTGGATTTTGCATATATTAAGATCTTCTACTCTCATGTGTATGTTGATACATTTTTTTAAGTATGTGTATGTTGATACATACATTGTTGAGCTGTAAAATGTTGTAGGAGAACTTCGTGAGTCATAAAAGCAAAAGATGAGGTATTCTATGCACATCCATGTATAACCACGTCCCCAGAGTAGTTAGCAAACTTTTGTGCAAACCATCATTGTTTACCTTTGGAAGTAATAGCAGTGTCCATGTCTAGGCAGAATGTTTAGCTTATGAAGTAACAGCAATATATTGTACTTATAGTATGTTATGAAATGTTCTTTCGAGTTTTGGAGCTGAATCACCACCATGTTAATATGCCAGTTCATAACTTGTCAAAAAGATATTAAGTTCTTAATATTTTGTTTGACAGATTCTTGTACCTATTGCAAATGGT</genome_strand>
        <mrna_strand>CTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGAACCCTCACGAGTAAGCCACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGTACCTATTGCAAATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E731780" ref_strand="+" ref_description="SGN-E731780 [LA28AF11]">
      <seq>ctatccttctttttagctcaaacttattataaaaatggcagcaccaattttgcgacacctcactactcctttccctgcctttgtaaaactcaacgaaacccccaaaattcaatcatttttcactctctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttccgctactaagaaggtattggttccgattgcgaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcatgccattgctgttgagtcaagagtccaaaaggatgcaaaagttgtgacaagtcgtggaccggcaacatccatcgagtatgctgttgcgttggttgaggagttgtatggaaaagagaaggctaatgaagtttctggcccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggagcttaattcagtaaattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55115" stop="51531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54815" g_stop="54611" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="406" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="556" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53126" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="739" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51890" g_stop="51831" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="799" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E731780" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54815" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53126"/>
          <exon e_start="51890" e_stop="51831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGG</genome_strand>
        <mrna_strand>CTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E450198" ref_strand="+" ref_description="SGN-E450198 [cSTS-8-N17]">
      <seq>ctcaaccaaacccccaaaattcactcatttttcactttctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttctgctactaagaaggtattggttccgattgcgaatggtacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgagaatcagcttcagattgaagtaatgtatgggattaagatcgttgctgatgctctaatttcggattgtgtagatactgagttcgaccttatttcgcttccgggaggggtacctggtgcagccaaccttgggaactgcaaaattttggaaagcattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctccagcggtagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactatcatctcatgccattgctgttgagtcaagagtccaaaaggatgcgaaagttgtgacaagtcgtggaccagcaacatccatcgagtatgctgttgcattggttgaggagttgtatggaaaagagaaggctaatgaagtttctggcccactggtgatgcgcccaaatcacagtgaagaatttgcatttgcggaccttaattcagtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55027" stop="51536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54727" g_stop="54611" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="318" r_length="201" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="468" r_length="150" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53126" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="651" r_length="183" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51890" g_stop="51836" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="706" r_length="55" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E450198" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54727" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53126"/>
          <exon e_start="51890" e_stop="51836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTGGTATATTTCCAATATCATCTCTTCGTTTTATCATAAAAGTGGAAGCTATGTATCGGCATGATGTGGGACTTGGTGTTGTAGACCTAAAATTTGGGATATTTAAGACTTGAATTTGCATCTGTGTCTTATGTTAACATATATGGGCTGAAACAAGAAAGTATATTCCTGTCTCTTCTATGTATGATTCTATTTTTGGAGGAGATAAACTAACTGAAATGTTAAAATGTATCCTACTATGCTGCAAAAGAAAAGAATGTTGTTTCTTTTCTATGTCATAGTTATGTGAACAAGTAGCTGGAGGAACTGCGTATGTTCAACTGGTGCATAATTGGCCGAAGTTTGGGGTAGCAAAATCGCTATCTCTTCTTCTTAGAATCTGATCTTTTGGAGGAGAGTCGAGTGGTTATGACAAATAGTGTTGAAACTCAGAGCCCGGTCTCACCTTTGTTGACTTCTATTCAAGATCAAAATACAGAATGCAACATTGTGGCCTCGTAGCTTTTCTCATCATACATCAAGTTGGTGCACTGAATTATCTTGTCCTGATGATTATTTTTATGTGTACAGTTGTGGAAATCAGTTCTTAGCTAGTTCTTCTTCTGGTATTGAATCTTATTTGTTCATAGTCCATATTCTGTCAAAGCTTTTTCTTAATCATTTTAACTTGGGTATCGGAGACCTGCAGATGTTTTCATTTTGCAGTTCTGGTGGTCTGGTATTTGCTCGGTGCCGTTTTTTTTTAAGCAAATCGGCTAGGCAATGTGCCTAGGGCTAGTTTTATTAATAAAGAGAAAAAAGATCTCAAAGAGAAATGTACAAGCAAGGGGGGCTAGACCTTACCTTACTAATCTTAGTAACGAACCTCTATTAATTAACAAGCATGAAAAAAAAAGAGCTAGAGAAAACTAGATATTCTATGATCATCATAGAGTTTATAATACACTCGGTGATGATACTATAAATGAGGATGCTTAAATAATGCAAAAATACTAAATCTAAGAATAAAGCTGAGTTGTCAAACTCAAACTTCATTTTATACATGTAACAATTAAAAGAGATGGGTTTCCCGTGTAATGTAACCTGAAATATTTCCTTCTTGTCTTCTTCGTCAAATATGTCCAACAAAACATGATAGTTCATCACTTCTTTTCGGATTTACTGGATGTGTTGTTGAAATTGTCATATGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAA</genome_strand>
        <mrna_strand>CTCAACCAAACCCCCAAAATTCACTCATTTTTCACTTTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCTGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGTACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGAGAATCAGCTTCAGATTGAAGTAATGTATGGGATTAAGATCGTTGCTGATGCTCTAATTTCGGATTGTGTAGATACTGAGTTCGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCTGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGCATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCAGCGGTAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTATCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCGAAAGTTGTGACAAGTCGTGGACCAGCAACATCCATCGAGTATGCTGTTGCATTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGACCTTAATTCAGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E315236" ref_strand="+" ref_description="SGN-E315236 [cTOA-24-G19]">
      <seq>aaaactcaacgaaacccccaaaattcaatcatttttcactctctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttccgctactaagaaggtattggttccgattgcgaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcatgccattgctgttgagtcaagagtccaaaaggatgcaaaagttgtgacaagtcgtggaccggcaacatccatcgagtatgctgttgcgttggttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55031" stop="52872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54731" g_stop="54611" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="322" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="472" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53172" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="609" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E315236" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54731" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGA</genome_strand>
        <mrna_strand>AAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E274457" ref_strand="+" ref_description="SGN-E274457 [cLEN-19-M12]">
      <seq>ttctctcgaggaacttcaatggcagttttagccatggcttccgctactaagaaggtatcggttccgattgcgaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcatgccattgctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="54964" stop="52954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54664" g_stop="54611" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="255" r_length="201" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="405" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53254" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="460" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E274457" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54664" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTG</genome_strand>
        <mrna_strand>TTCTCTCGAGGAACTTCAATGGCAGTTTTAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATCGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E474599" ref_strand="+" ref_description="SGN-E474599 [cSTB-37-G7]">
      <seq>aaatggcagcgaccaatattgcgacacctcactactcctttcccttcctttataaaactcaaccaaacccccaaaagtcactcatttttcactttctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttctgctactaagaaggtattggttccgattgcgaatggtacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgagaatcagcttcagattgaagtaatgtatgggattaagatcgttgctgatgctctaatttcggattgtgtagatactgagttcgaccttatttcgcttccgggaggggtacctggtgcagccaaccttgggaactgcaaaattttggaaagcattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctccagcggtagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactatcatctcatgccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55083" stop="52961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54783" g_stop="54611" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="375" r_length="201" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="525" r_length="150" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53261" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="573" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E474599" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54783" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGCAGC-ACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATT</genome_strand>
        <mrna_strand>AAATGGCAGCGACCAATATTGCGACACCTCACTACTCCTTTCCCTTCCTTTATAAAACTCAACCAAACCCCCAAAAGTCACTCATTTTTCACTTTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCTGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGTACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGAGAATCAGCTTCAGATTGAAGTAATGTATGGGATTAAGATCGTTGCTGATGCTCTAATTTCGGATTGTGTAGATACTGAGTTCGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCTGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGCATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCAGCGGTAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTATCATCTCATGCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E329941" ref_strand="+" ref_description="SGN-E329941 [cTOD-5-G10]">
      <seq>ccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttccgctactaagaaggtattggttccgattgctaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgtagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaagtattgtaaaaaagcaagctgaaaatggaaagctatatgctgcaatatgtgctgctcctgcgatagcacttggatcatgggggcttttgaaggggctgaaagcaacgtgttatccatcgtatatggaggaactgtcatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="54978" stop="52967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54678" g_stop="54611" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="269" r_length="201" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53411" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="419" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53308" g_stop="53267" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="461" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E329941" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54678" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53411"/>
          <exon e_start="53308" e_stop="53267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAAGTGAGCTCATTCATTTCTTTCCCTGCTTAAAATTCAAGTATGTTCTTTTTCTTTTGAAGGGACTGAAAGTTAGAATTGTGTTTTTCGATTGTTCTTTGATAGGCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCAT</genome_strand>
        <mrna_strand>CCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCTAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA......................................................................................................GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E281049" ref_strand="+" ref_description="SGN-E281049 [cLER-7-L2]">
      <seq>ttttattagccattgctatccttctttttagctcaaacttattataaaaatggcagcaccaattttgcgacacctcactactcctttccctgcctttgtaaaactcaacgaaacccccaaaattcaatcatttttcactctctccactcatcccaactctagaaaattctctcgaggaacttcaatttcagtttcagccatggcttccgctactaagaaggtattggttccgattgcgaatggaacagagccgattgaggctatagtgccgatagatatactgcggagagctggtgcggaggttattgttgcttccgttgggaatcagcttcagattgaagtgatgtatggaattaagatcgttgctgatgttctaattacggattgtgcagatactgagtttgaccttatttcgcttccgggaggggtaccaggtgcagccaaccttgggaactgcaaaattttggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="55130" stop="53211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54830" g_stop="54611" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54520" g_stop="54320" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="421" r_length="201" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759">
            <donor d_prob="0.786" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53560" g_stop="53511" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="471" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E281049" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54830" e_stop="54611"/>
          <exon e_start="54520" e_stop="54320"/>
          <exon e_start="53560" e_stop="53511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTAGCCATTTCTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAGGTTCGTATTATCTATACTTTTTCTCTATTGTAGACGGATTCAGAATTTGATCATTAACTGTAGATTTGTATACATTTGTTTGTTATATAGGTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCGGTATGTTTATTGTTATTAGGCTTTGCTGAATTGAACATTGAGGTTAATCTGTTCTAAATTATTTGCTTAGTTCCTGGTGTAGAGTTTGGAATAGCTAAAACATGCATAATTTGAGGTCTATCCTTTCAGTTTTATGTGGCATTAGTTTGAGCCTGCTCGTATTACTTGTCTGTTGATTTATTTACCTGATATTTTGGTGGAAGACTTGAAGTACGGATTCTGGATAAACTACTCATGAATTATAAAAGTGTATGTTCATTATTATATGATTTAGTTTTTGTAAGATTATTACGATCAGTCGTGTAAGAGTGCAGATGCTATGATGATTATTTAATCATGTCCATAGTTGTGTGTGTGTCCGATGAAAAATGTTAATGCAATTAAAGAGTTGACAGTTTTGCATTACTTTATCTTTGTTACTTTCGATGAGGTCAAAAGAGACATTCTAAAAGAAGCAAAGTGCTTAAGGCTGGGGGGCATAAGAGGCTAAAGAGGATGTCTACGCAATTCTTGTCGATATTCCAGACCTTTGTAATGGAAAAGCAAGTAAATCCTTTACAGTTTTATTGTTTAGTAAATGGAAATGATGAATATTGCAAGAAGGATCTCGTCTTACATGTCCTGTTCCTTTTCCTGTGCCAACACGATGAATGATACTTAAATGTTTCTCGATACTGGTCAAGTCTCATTCAGGGACACATGACGATAGCTTCTGTAGTTATGATTCTTTTTTTGGATAATGTTTTCACCATTCTTCAGGGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAG</genome_strand>
        <mrna_strand>TTTTATTAGCCATTGCTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG..........................................................................................GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGCAGATACTGAGTTTGACCTTATTTCGCTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E314585" ref_strand="+" ref_description="SGN-E314585 [cTOA-20-G16]">
      <seq>gagtggagttcatgaagtaattacaagcaaacaaaactctgggccaaagaaacgtaagaaatgccgtcttagtgacgatgatctcttaatttcagccgtatttagaaacacgacatgcaaatctggcaacaaaaggtcctctggtaaaatcaaacctctaaggaaaaggaagaaccagaaaagtggtggtaagttgcttttacgtagtcttattaagggtggaaaacacttccccgaagaaaaatggcctacctttgcctcaaggactgtgttatcctggttaattcattctggggttgtctccctaaatgaaatgatccagtaccagaacttgaaggatgattctgtggtaaaaaccggctatattaccgctgatggaatatcgtgtaattgctgtgacgaggtcctatccatctctagcttcaaaaagcatgccggttttaagcacaatcgcccctgtttgaatcttttcatggagaatggtaagccattcaccttatgtcagcttgaggcttggtcagatgaatacaaggcacggagggcagtttctcaaactttcccagctgangaaaggaccaaaatgatgacagttgcgggcgatgtggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="64666" stop="65874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64966" g_stop="65574" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E314585" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64966" e_stop="65574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGGAGTTCATGAAGTAATTACAAGCAAACAAAACTCTGGGCCAAAGAAACGTAAGAAATGCCGTCTTAGTGACGATGATCTCTTAATTTCAGCCGTATTTAGAAACACGACATGCAAATCTGGCAACAAAAGGTCCTCTGGTAAAATCAAACCTCTAAGGAAAAGGAAGAACCAGAAAAGTGGTGGTAAGTTGCTTTTACGTAGTCTTATTAAGGGTGGAAAACACTTCCCCGAAGAAAAATGGCCTACCTTTGCCTCAAGGACTGTGTTATCCTGGTTAATTCATTCTGGGGTTGTCTCCCTAAATGAAATGATCCAGTACCAGAACTTGAAGGATGATTCTGTGGTAAAAACCGGCTATATTACCGCTGATGGAATATCGTGTAATTGCTGTGACGAGGTCCTATCCATCTCTAGCTTCAAAAAGCATGCCGGTTTTAAGCACAATCGCCCCTGTTTGAATCTTTTCATGGAGAATGGTAAGCCATTCACCTTATGTCAGCTTGAGGCTTGGTCAGATGAATACAAGGCACGGAGGGCAGTTTCTCAAACTTCCCAAGCTGAGGAAAGGGACCAAAATGATGACAGTTGCGGGCGATGTGGTGA</genome_strand>
        <mrna_strand>GAGTGGAGTTCATGAAGTAATTACAAGCAAACAAAACTCTGGGCCAAAGAAACGTAAGAAATGCCGTCTTAGTGACGATGATCTCTTAATTTCAGCCGTATTTAGAAACACGACATGCAAATCTGGCAACAAAAGGTCCTCTGGTAAAATCAAACCTCTAAGGAAAAGGAAGAACCAGAAAAGTGGTGGTAAGTTGCTTTTACGTAGTCTTATTAAGGGTGGAAAACACTTCCCCGAAGAAAAATGGCCTACCTTTGCCTCAAGGACTGTGTTATCCTGGTTAATTCATTCTGGGGTTGTCTCCCTAAATGAAATGATCCAGTACCAGAACTTGAAGGATGATTCTGTGGTAAAAACCGGCTATATTACCGCTGATGGAATATCGTGTAATTGCTGTGACGAGGTCCTATCCATCTCTAGCTTCAAAAAGCATGCCGGTTTTAAGCACAATCGCCCCTGTTTGAATCTTTTCATGGAGAATGGTAAGCCATTCACCTTATGTCAGCTTGAGGCTTGGTCAGATGAATACAAGGCACGGAGGGCAGTTTCTCAAACTTTCCCAGCTGANGAAA-GGACCAAAATGATGACAGTTGCGGGCGATGTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E307273" ref_strand="+" ref_description="SGN-E307273 [cLEY-12-G6]">
      <seq>gaatatcgtgtaattgctgtgacgaggtcctatccatctctagcttcaaaaagcatgccggttttaagcacaatcgcccctgtttgaatcttttcatggagaatggtaagccattcaccttatgtcagcttgaggcttggtcagatgaatacaaggcacggagggcagtttctcaaacttcccaagctgaggaaagggaccaaaatgatgacagttgcgggcgatgtggtgatggaggcgaactgatttgctgtgacaattgtccagctacatttcatctagcttgtttgttcacacaggagcttcctgaagggagttggtactgttcacaatgcacgtgccataaatgtggggacgtggttagatgtattgaatcaagttctcctggtggatataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="65043" stop="66896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65343" g_stop="65641" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65642" i_stop="66497" i_length="856">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66498" g_stop="66596" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="398" r_length="99" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E307273" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65343" e_stop="65641"/>
          <exon e_start="66498" e_stop="66596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATATCGTGTAATTGCTGTGACGAGGTCCTATCCATCTCTAGCTTCAAAAAGCATGCCGGTTTTAAGCACAATCGCCCCTGTTTGAATCTTTTCATGGAGAATGGTAAGCCATTCACCTTATGTCAGCTTGAGGCTTGGTCAGATGAATACAAGGCACGGAGGGCAGTTTCTCAAACTTCCCAAGCTGAGGAAAGGGACCAAAATGATGACAGTTGCGGGCGATGTGGTGATGGAGGCGAACTGATTTGCTGTGACAATTGTCCAGCTACATTTCATCTAGCTTGTTTGTTCACACAGGTTCGTCTTTTGACTCTTTTCACTTAGTTTACTTGTTCGAGTCAGTTTGATGCCTTTATCTTGCCTTGAATAAATAATTTTCTTGCTCAACATTTATGTTTAATCCACTTGTAAATTGTAAGATGTCAAAAGATCCGTCCTAGCGCTTTATGCATGGGTTCTTATATGATTTTATATGACGTTATATAAACAGAACACCAAAGAAGTTGCATGTCTTGTTCAGTCCTTACTCTCAATTATTTCCCTTTCAGGACTCGTCTTTCCACCAAAACAGTCCAAGGGATTGCTGTGCATGGATTTCTTGCTTTAATGACATTTTTGTCTTAGTACTTTAATCTGCATATTACTTGACATGACTTCTTATTTCTATTCTATTCCCCATAAAATAATAGAAAGGTTTCACATAATTAAATACGGGTATTTGTCGAATATCGCTAACCAAATGCTGCATAACATTATGTGAAATGGAACATATTTGCACTCTACTTAGTTGGGGTCAAATATGTCCTTGTCTTCACTTAAATGGACTATATTACCCTCATTTTCTTCGTAATCACTTGCTTTACTTTGTTTTTATTGCCTTTTTACCATTTTCGCAAGTCGTACCATGGTTTCTCTACAAACCTGTACTCTATTTGTTTGCCAATATTGTTCATTCTCAAAAAACTAAATTATTTACCAATATTGTTTTGGTTTTGTCTCTGCACTAGGCATGATTGTATGATTATTCTAAAATATGTCTTGGTTTCCCTTTGATTTTGTTGCGTATCATATGAAGTTGAGTACTGAATTTGTTTAATGACACTGGACAAGAGATATAAATTCTAGTAGATTAACTTATTATTTCTTGTTTCAGGAGCTTCCTGAAGGGAGTTGGTACTGTTCACAATGCACGTGCCAGAAATGTGGGGACGTGGTTAGATGTAGTGAATCAAGTTCTCCTGGTGGATATAAA</genome_strand>
        <mrna_strand>GAATATCGTGTAATTGCTGTGACGAGGTCCTATCCATCTCTAGCTTCAAAAAGCATGCCGGTTTTAAGCACAATCGCCCCTGTTTGAATCTTTTCATGGAGAATGGTAAGCCATTCACCTTATGTCAGCTTGAGGCTTGGTCAGATGAATACAAGGCACGGAGGGCAGTTTCTCAAACTTCCCAAGCTGAGGAAAGGGACCAAAATGATGACAGTTGCGGGCGATGTGGTGATGGAGGCGAACTGATTTGCTGTGACAATTGTCCAGCTACATTTCATCTAGCTTGTTTGTTCACACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTCCTGAAGGGAGTTGGTACTGTTCACAATGCACGTGCCATAAATGTGGGGACGTGGTTAGATGTATTGAATCAAGTTCTCCTGGTGGATATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E400407" ref_strand="+" ref_description="SGN-E400407 [cSTC-8-F23]">
      <seq>tttgcttcttccttttatatatcacgagatccccatctccgttcctctctttctttcccccattttttccctcttttacatgtcttcttcatacgctttctttcaattgttgaggttcagttctttatactgaaacactcggcttactgggaactattcaacttcacatnttttccggcaaaagaactgaaaggggtttcgaaaatgtcggaatctggaagacacatgtcggaaataggacttgatggggtaactgatcgcttgaagaactcattgacttgcgttgaagatggaaatggagttgaaattaacaagcccgattttcgagaactcgatctgggttcacctgtttctccattacggaatcgaccgcgtggattcaccgctactactactacgacgacgacgactacgactacgactactagtagcagttctaattcatctggatctggatcggtatcgggtcggaatggatctcatttgggtccgaaaaagtccgaatccagtcactccggtgagctttcaggttcagttgagagctcaccgaaggcgcgtgggtttaagccaggtcacgcgcggtcttattccagtggtggcattgccgttaattcacctccgttaaatgtgcttcccaccggaaacatctgcccgtccgggaagattttgaaaaccggcatggctagtaagtcatcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="69962" stop="71271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70262" g_stop="70971" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E400407" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70262" e_stop="70971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCTTCTTCCTTTTATATATCACGAGATCCCCATCTCTGTTCCTCTCTTTCTTTTCCCCCATTTTTTCCCCTCTTTTACATGTCTTCTTCATACGATTTCTTTCAATTGTTGAGGTTCAGTTCATTATACTGAAACAATCGGTTTTCTGGGAGCTATTCAACTTCACATTTTTTTTCCGGCCAAAGAACTGAAAGGGGTTTCGGAAATGTCGGAATCTGGGAGACCCATGTCGGAAATAGGACTTGATGGGGTAACTGATCGATTGAAGAACTCATTGACTTGCGCGGAAGATGGAAATGGAGTTGAAATTAACAAGCCCGATTTTCGAGAACTCGATCTGGGTTCACCTGTTTCTCCATTACGGAATCGACCGCGTGGATTCACCGCTACTACTACTACTACGACGACGACGACTACGACTACTACAACAACTACTAGTAGCAGTTCTAATTCATCTGGATCTGGATCGGTATCGGGTCGGAATGGATCTCATTTGGGTCGGAAAAAGTCCGAATCCAGTCACTCCGGTGAGCTTTCAAGTTCAGTGGAGAGCTCACCGAAGGCGCGTGGGTTTAAGCCAGGTCACGCGCGGTCTTATTCCAGTGGTGGCATTGCTGTAAATTCACCTCCGTTAAATGTGCTTCCCACCGGGAACATCTGTCCGTCCGGGAAGATTTTGAAGACCGGCATGGCTAGTAAGTCATCGA</genome_strand>
        <mrna_strand>TTTGCTTCTTCCTTTTATATATCACGAGATCCCCATCTCCGTTCCTCTCTTTC-TTTCCCCCATTTTTT-CCCTCTTTTACATGTCTTCTTCATACGCTTTCTTTCAATTGTTGAGGTTCAGTTCTTTATACTGAAACACTCGGCTTACTGGGAACTATTCAACTTCACA--TNTTTTCCGGCAAAAGAACTGAAAGGGGTTTCGAAAATGTCGGAATCTGGAAGACACATGTCGGAAATAGGACTTGATGGGGTAACTGATCGCTTGAAGAACTCATTGACTTGCGTTGAAGATGGAAATGGAGTTGAAATTAACAAGCCCGATTTTCGAGAACTCGATCTGGGTTCACCTGTTTCTCCATTACGGAATCGACCGCGTGGATTCACCG---CTACTACTACTACGACGACGACGACTACG---ACT---ACGACTACTAGTAGCAGTTCTAATTCATCTGGATCTGGATCGGTATCGGGTCGGAATGGATCTCATTTGGGTCCGAAAAAGTCCGAATCCAGTCACTCCGGTGAGCTTTCAGGTTCAGTTGAGAGCTCACCGAAGGCGCGTGGGTTTAAGCCAGGTCACGCGCGGTCTTATTCCAGTGGTGGCATTGCCGTTAATTCACCTCCGTTAAATGTGCTTCCCACCGGAAACATCTGCCCGTCCGGGAAGATTTTGAAAACCGGCATGGCTAGTAAGTCATCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E325871" ref_strand="+" ref_description="SGN-E325871 [cTOC-12-P10]">
      <seq>agtcatcgaagactgacgttttaggttctggaacgggttattacggccaccgaattataatacgttgaggtaccggtgtaaaacctagtagcggtcctgtcggtggggttgacgccgatgctacacagacggcgaatttgataggagttacggctggagacacaatgaaaagaggaaagtcgaatactgatccagaggagttgaagagattaggaaatgagaattacaaaaagggttatttcgttgaagctttaaatctgtatgataaagctatagctatttctccaggcaatgctgcttacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="70663" stop="71566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70963" g_stop="71266" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E325871" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70963" e_stop="71266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATCGAAGACTGACGTTTTAGGTTCTGGAACGGGTTATTACGGTCACGGAAGTATAATGCGTGGAGGTACCGGTGTAAAACCTGGTGGCGGTGCTGTCGGTGGGGTTGACGCCGGTGCTACACAGACGGCGAATTTGAGAGGGGTAATGGCTGGAGACACAATGAAAAGAGGAATGTTGAATACTGATCCAGAGGAGTTGAAGAGATTAGGAAATGAGAATTACAAAAAGGGTTATTTCGTTGAAGCTTTAAATCTGTATGATAAAGCTATAGCTATTTCTCCAGGCAATGCTGCTTACCA</genome_strand>
        <mrna_strand>AGTCATCGAAGACTGACGTTTTAGGTTCTGGAACGGGTTATTACGGCCACCGAATTATAATACGTTGAGGTACCGGTGTAAAACCTAGTAGCGGTCCTGTCGGTGGGGTTGACGCCGATGCTACACAGACGGCGAATTTGATAGGAGTTACGGCTGGAGACACAATGAAAAGAGGAAAGTCGAATACTGATCCAGAGGAGTTGAAGAGATTAGGAAATGAGAATTACAAAAAGGGTTATTTCGTTGAAGCTTTAAATCTGTATGATAAAGCTATAGCTATTTCTCCAGGCAATGCTGCTTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E703529" ref_strand="+" ref_description="SGN-E703529 [FA21DA10]">
      <seq>gcagccattgcttctggagcagatgcgtctcctcagttatttgcttgtagagcagaagctcttttgaagctacatcaagtagaggatgcagagttgagcttatcaattactcggaagcatgaaccatctactggtggatcaccagagtcaaaaatttttgggatgctttcagaggcatatgtgttctttgttcaagctcagattgacctggctatgggaaggtttgaaagtgcaatcagttcagtagagcgagctggacatattgatcctcgaaatattgaagtatcagtttttctcaacaatacaaggtcggtgggacgggctcgtacccgtggcaatgatctatttaaatccgaaaggtatactgaagcatgtgctgcttatggggaaggtctcaggcgtgattcgtcaaattcagttctctattgtaatagagcagcttgctggtataaactcgggcagtgggaaaaagctgtggatgactgcaatcgagcgctcactttccagccacactacactaaagcccttcttcgaagggctgcctcaaataccaagcttgagagatgggctgaagctgttagagattatgaggttttgaggaaagcgcttccatatgacaccgaggttgctgaatcgttattccatgctcaagttgcattaaagaaatcacgcggagaagacattcacaatatgaaatttggtggggaggtggaattagtttctggtctcgagcagtttcaagctgcgatttcatcgccttgtgcatctgtggtccatttcaaagcagcatctaacctacaatgcaagcagatatcccctttcttggatactttaaccaccaagtatccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="72135" stop="73957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72435" g_stop="72470" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72471" i_stop="72560" i_length="90">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72561" g_stop="72745" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="221" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72746" i_stop="72821" i_length="76">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72822" g_stop="73155" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="555" r_length="334" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73156" i_stop="73274" i_length="119">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73275" g_stop="73479" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="760" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73480" i_stop="73566" i_length="87">
            <donor d_prob="0.023" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="73567" g_stop="73657" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="851" r_length="91" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E703529" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>851</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72435" e_stop="72470"/>
          <exon e_start="72561" e_stop="72745"/>
          <exon e_start="72822" e_stop="73155"/>
          <exon e_start="73275" e_stop="73479"/>
          <exon e_start="73567" e_stop="73657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCCATTGCTTCTGGAGCAGATGCGTCTCCTCAGGTAAAGCAATACTAGTGATCCAAATGTGGAAGAAAATAATGCATGCAAGTTTGAATGCTGGTACTGAATTACTGAAATTGAATTTTACAGTTATTTGCTTGTAGAGCAGAAGCTCTTTTGAAGCTACATCAAGTAGAGGATGCAGAGTTGAGCTTATCAATTACTCGGAAGCATGAACCATCTACTGGTGGATCACCAGAGTCAAAAATTTTTGGGATGCTTTCAGAGGCATATGTGTTCTTTGTTCAAGCTCAGATTGACCTGGCTATGGGAAGGTCAGTATAGAATGATTTGCTAAGTTTTTATAAGGTTGTGGGGGAGTAAGAGAAGTTGGATCATGGATACTTGCAGGTTTGAAAGTGCAATCAGTTCAGTAGAGAGAGCTGGACATATTGATCCTCGAAATATTGAAGTATCAGTTTTTCTCAACAATACAAGGTCGGTGGGACGGGCTCGTACCCGTGGCAATGATCTATTTAAATCCGAAAGGTATACTGAAGCATGTGCTGCTTATGGGGAAGGTCTCAGGCGTGATTCGTCAAATTCAGTTCTCTATTGTAATAGAGCAGCTTGCTGGTATAAACTCGGGCAGTGGGAAAAAGCTGTGGATGACTGCAATCGAGCGCTCACTTTCCAGCCACACTACACTAAAGCCCTTCTTCGAAGGGCTGCCTCAAATACCAAGGTAACATGCCATATAAAAATCTTTTCTAGTCAGTGTGTTCCTAGAAGAATATTAATATATTATCACTTGCTTGTTCCTGTTGTTGAGTAAAATTAATTTTAACTGTTGATCAATTATAGCTTGAGAGATGGGCTGAAGCTGTTAGAGATTATGAGGTTTTGAGGAAAGCGCTTCCATATGACACCGAGGTTGCTGAATCGTTATTCCATGCTCAAGTTGCATTAAAGAAATCACGCGGAGAAGACATTCACAATATGAAATTTGGTGGGGAGGTGGAATTAGTTTCTGGTCTCGAGCAGTTTCAAGCTGCGATTTCATCGCCTTGTATGTTTTCCCCTGCACTTGTAGCTTGACCCTCCTTAAGTCATTTTCTGCCAATTCAGAGATTAATTATTATATTGGACTTTGTAGGTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTC</genome_strand>
        <mrna_strand>GCAGCCATTGCTTCTGGAGCAGATGCGTCTCCTCAG..........................................................................................TTATTTGCTTGTAGAGCAGAAGCTCTTTTGAAGCTACATCAAGTAGAGGATGCAGAGTTGAGCTTATCAATTACTCGGAAGCATGAACCATCTACTGGTGGATCACCAGAGTCAAAAATTTTTGGGATGCTTTCAGAGGCATATGTGTTCTTTGTTCAAGCTCAGATTGACCTGGCTATGGGAAG............................................................................GTTTGAAAGTGCAATCAGTTCAGTAGAGCGAGCTGGACATATTGATCCTCGAAATATTGAAGTATCAGTTTTTCTCAACAATACAAGGTCGGTGGGACGGGCTCGTACCCGTGGCAATGATCTATTTAAATCCGAAAGGTATACTGAAGCATGTGCTGCTTATGGGGAAGGTCTCAGGCGTGATTCGTCAAATTCAGTTCTCTATTGTAATAGAGCAGCTTGCTGGTATAAACTCGGGCAGTGGGAAAAAGCTGTGGATGACTGCAATCGAGCGCTCACTTTCCAGCCACACTACACTAAAGCCCTTCTTCGAAGGGCTGCCTCAAATACCAAG.......................................................................................................................CTTGAGAGATGGGCTGAAGCTGTTAGAGATTATGAGGTTTTGAGGAAAGCGCTTCCATATGACACCGAGGTTGCTGAATCGTTATTCCATGCTCAAGTTGCATTAAAGAAATCACGCGGAGAAGACATTCACAATATGAAATTTGGTGGGGAGGTGGAATTAGTTTCTGGTCTCGAGCAGTTTCAAGCTGCGATTTCATCGCCTT.......................................................................................GTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E299947" ref_strand="+" ref_description="SGN-E299947 [cLEW-11-K5]">
      <seq>agcttcaagctgcgatttcatcgccttgtgcatctgtggtccatttcaaagcagcatctaacctacaatgcaagcagatatcccctttcttggatacctttaaccaccaagtatccttccataaattttcttaaggttgatgtggaagagagcccgtcaattgctaatgcagagaatgttagaatcgtaccaacattcaagatttacaaaaagggaagccgcgtgaaggagatgatctgcccaagtcaagaggtgttagaatcatcggtgaggcattacagtatttaagtgccatgattgcaatgtcatcgtgcttcttcgtgttctctcatcattccaatcacccggtattcttgccgtttacctatgacaaaattgagctactactactactacataataacaatctcattaaggagccaatgcagccaaatgccagcaaccttcagagggattagtttagtctccttttttcccttttaattttattcattcattgctgtcttggttcctacttcttcccacctccacattaatctttctcttttcatatcacttattcttattatatganaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73153" stop="74504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73453" g_stop="73479" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73480" i_stop="73566" i_length="87">
            <donor d_prob="0.023" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73567" g_stop="73673" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="135" r_length="108" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73674" i_stop="73758" i_length="85">
            <donor d_prob="0.928" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73759" g_stop="74204" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="581" r_length="446" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E299947" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73453" e_stop="73479"/>
          <exon e_start="73567" e_stop="73673"/>
          <exon e_start="73759" e_stop="74204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTCAAGCTGCGATTTCATCGCCTTGTATGTTTTCCCCTGCACTTGTAGCTTGACCCTCCTTAAGTCATTTTCTGCCAATTCAGAGATTAATTATTATATTGGACTTTGTAGGTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATA-CTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAGGTAATTTCTTTTAGCAATGCCTTGTCTTGCTGCGATTTCTGATTGTTTTATATGCCTTGTATTCATTTCCTCTTCTGTGTTGAAGGTTGATGTGGAAGAGAGCCCGTCAATTGCTAATGCAGAGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAAAAA</genome_strand>
        <mrna_strand>AGCTTCAAGCTGCGATTTCATCGCCTT.......................................................................................GTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACCTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAG.....................................................................................GTTGATGTGGAAGAGAGCCCGTCAATTGCTAATGCAGAGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGANAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E611199" ref_strand="-" ref_description="SGN-E611199 [60948]">
      <seq>gcgatttcatcaccttgtgcatctgtggtccattgtaaagcagcatctaacctacgatgcaagcagatatcccctttcttagatactttaaccaccaagtatccttccataaattttctcaaggtggatgtggaagagagcccggcaattgctaatgcagagaatgttagaattgtacctacatttaagatatacaagaagggaagccgcgtgaaggagatgatctccccaagtcaagaggtgttagaatcatcggtgaggcattacagtatttaagtgccatgattgcaatgccatcgtgcttcttcgtgttctctcatcattccaatcacccggtattcttgccattacctatgacaaaattgagctattacataataatcaatctcattaaggagccaatgcagccaaacgccagcaaccttcagagggattagtttagtctccttttttcccttttaatttattcattcattgctgtcttggttcctacttcttcccatctccattaatctttctcttttcaaatcacttttcttattataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73267" stop="74506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73464" g_stop="73479" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73480" i_stop="73566" i_length="87">
            <donor d_prob="0.023" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73567" g_stop="73673" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="123" r_length="107" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73674" i_stop="73758" i_length="85">
            <donor d_prob="0.928" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73759" g_stop="74206" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="558" r_length="435" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E611199" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.023" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E611199" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="73464" e_stop="73479"/>
          <exon e_start="73567" e_stop="73673"/>
          <exon e_start="73759" e_stop="74206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGATTTCATCGCCTTGTATGTTTTCCCCTGCACTTGTAGCTTGACCCTCCTTAAGTCATTTTCTGCCAATTCAGAGATTAATTATTATATTGGACTTTGTAGGTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAGGTAATTTCTTTTAGCAATGCCTTGTCTTGCTGCGATTTCTGATTGTTTTATATGCCTTGTATTCATTTCCTCTTCTGTGTTGAAGGTTGATGTGGAAGAGAGCCCGTCAATTGCTAATGCAGAGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAAAAAAA</genome_strand>
        <mrna_strand>GCGATTTCATCACCTT.......................................................................................GTGCATCTGTGGTCCATTGTAAAGCAGCATCTAACCTACGATGCAAGCAGATATCCCCTTTCTTAGATACTTTAACCACCAAGTATCCTTCCATAAATTTTCTCAAG.....................................................................................GTGGATGTGGAAGAGAGCCCGGCAATTGCTAATGCAGAGAATGTTAGAATTGTACCTACATTTAAGATATACAAGAAGGGAAGCCGCGTGAAGGAGATGATCTCCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGCCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCC-ATTACCTATGACAAAATTGAGCTA-T--TAC-A-TA-ATAAT--CAATCTCATTAAGGAGCCAATGCAGCCAAACGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAA-TTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCATCT-C-CATTAATCTTTCTCTTTTCAAATCACTT-TTCTTATTATAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E288259" ref_strand="+" ref_description="SGN-E288259 [cLES-16-O13]">
      <seq>tcgccttgagcatctgtggtccatttcaaagcagcatgtaacctactatgcaagcagatatcccctttcttggatactttaaccaccaagtatccttccataaattttcttaaggttgatgttgaagaaaacccgtcaatctctaatgcacagaatgttagaaatccaccaacattcaagacttacaaaaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73267" stop="73975"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73473" g_stop="73479" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73480" i_stop="73566" i_length="87">
            <donor d_prob="0.023" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73567" g_stop="73673" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="114" r_length="107" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73674" i_stop="73758" i_length="85">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73759" g_stop="73839" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="195" r_length="81" r_score="0.864"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E288259" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>195</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73473" e_stop="73479"/>
          <exon e_start="73567" e_stop="73673"/>
          <exon e_start="73759" e_stop="73839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCTTGTATGTTTTCCCCTGCACTTGTAGCTTGACCCTCCTTAAGTCATTTTCTGCCAATTCAGAGATTAATTATTATATTGGACTTTGTAGGTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAGGTAATTTCTTTTAGCAATGCCTTGTCTTGCTGCGATTTCTGATTGTTTTATATGCCTTGTATTCATTTCCTCTTCTGTGTTGAAGGTTGATGTGGAAGAGAGCCCGTCAATTGCTAATGCAGAGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGA</genome_strand>
        <mrna_strand>TCGCCTT.......................................................................................GAGCATCTGTGGTCCATTTCAAAGCAGCATGTAACCTACTATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAG.....................................................................................GTTGATGTTGAAGAAAACCCGTCAATCTCTAATGCACAGAATGTTAGAAATCCACCAACATTCAAGACTTACAAAAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E338270" ref_strand="+" ref_description="SGN-E338270 [cTOE-13-I4]">
      <seq>agaatgttagaatcgtaccaacattcaagatttacaaaaagggaagccgcgtgaaggagatgatctgcccaagtcaagaggtgttagaatcatcggtgaggcattacagtatttaagtgccatgattgcaatgtcatcgtgcttcttcgtgttctctcatcattccaatcacccggtattcttgccgtttacctatgacaaaattgagctactactactactacataataacaatctcattaaggagccaatgcagccaaatgccagcaaccttcagagggattagtttagtctccttttttcccttttaattttattcattcattgctgtcttggttcctacttcttcccacctccacattaatctttctcttttcatatcacttattcttattatatgaaaaaaaaaaattaaaaaaattaggttacatttccctagtataaaacttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73496" stop="74547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73796" g_stop="74247" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E338270" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73796" e_stop="74247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAAAAAAATTAAAAAAATTAGGTTACATTTCCCTAGTATAAAACTTGAG</genome_strand>
        <mrna_strand>AGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAAAAAAATTAAAAAAATTAGGTTACATTTCCCTAGTATAAAACTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E338197" ref_strand="+" ref_description="SGN-E338197 [cTOE-13-J4]">
      <seq>agaatgttagaatcgtaccaacattcaagatttacaaaaagggaagccgcgtgaaggagatgatctgcccaagtcaagaagtgttagaatcatcggtgaggcattacagtatttaagtgccatgattgcaatgtcatcgtgcttcttcgtgttctctcatcattccaatcacccggtattcttgccgtttacctatgacaaaattgagctactactactactacataataacaatctcattaaggagcccatgcagccaaatgccagctaccctcagagggattagtttagtctccttttttcccttttaattttattcattcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73496" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73796" g_stop="74121" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E338197" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73796" e_stop="74121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATT</genome_strand>
        <mrna_strand>AGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAAGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCCATGCAGCCAAATGCCAGCTACCCTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E301401" ref_strand="+" ref_description="SGN-E301401 [cLEX-8-A2]">
      <seq>atcgtaccaacattcatgatttacaaaaagggaagccgcgtgaaggagatgatctttccaagtcattaggtgttattatcatcggtgaggcattacagtatttaagtgccatgatttcaatgtcatcgtgcttcttcgtgttctctcatcattccaatcaccctgtattcttgccgtttacctatgacaaaattgagctactactactactacatatttacaatctcattaaggagccaatgcagccaaatgccagcctccttcatagtggattagtttagtctccttttttcccttttaattttattcattcattgctgtcttggttcctacttcttcccacctccacattaatctttctcttttcatatctcttattcttattatatgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="73507" stop="74501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73807" g_stop="74201" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E301401" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73807" e_stop="74201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAG-GGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAA</genome_strand>
        <mrna_strand>ATCGTACCAACATTCATGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTTTCCAAGTCATTAGGTGTTATTATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTTCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCTGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATATTTACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCCTCCTTCATAGTGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCTCTTATTCTTATTATATGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E222801" ref_strand="-" ref_description="SGN-E222801 [cLEL-16-K5]">
      <seq>gctaagcactggaagtcaaatgaggttgaagctgttgaaacggcctaaggagtggacacgcnctatatgctagtggtgcatgaagatatagcaacgaaatgttcaaaataacaaaaatcatggaatgtaatcaatattgactggcttatcaatatgaacctggatagcaccctccaaatttgtataattgaatgtgacaaccctttagttttttaatggttcaggaatgaactttgttacaacaaaactggaaatggtaaggattttgtccctgcaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="80381" stop="79405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80117" g_stop="80075" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129">
            <donor d_prob="0.942" d_score="0.95"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79945" g_stop="79712" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="280" r_length="236" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="281" polyA_stop="300"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E222801" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222801" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80117" e_stop="80075"/>
          <exon e_start="79945" e_stop="79712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGG-GTAAGTTGTGTCCTGGTCTTCCAATCTAGAGCTGTAAATGTCAAGTAGAAAATGTTAATCTTATGCAAATCTGTATACGCATTCTTGTTCAATCCTTGATTTGACTTTCGTTTTTCTTCAATGATCCAGCTAAGGAGTGGACACGC-CTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAAT-GTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATGGTAAGGATTTTGTCACTGCAAAGA</genome_strand>
        <mrna_strand>GCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGGC.................................................................................................................................CTAAGGAGTGGACACGCNCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATGGTAAGGATTTTGTCCCTGCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E222211" ref_strand="-" ref_description="SGN-E222211 [cLEL-16-K5]">
      <seq>gctaagcactggaagtcaaatgaggttgaagctgttgaaacggctaaggagtggacacgcctatatgctagtggtgcatgaagatatagcaacgaaatgttcaaaataacaaaaatcatggaatgtaatcaatattgactggcttatcaatatgaacctggatagcaccctccaaatttgtataattgaatgtgacaaccctttagttttttaatgttcaggaatgaactttgttacaacaaaactggaaatggtaaggattttgtcactgcaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="80381" stop="79405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80117" g_stop="80075" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79945" g_stop="79712" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="277" r_length="234" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="278" polyA_stop="297"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E222211" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222211" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80117" e_stop="80075"/>
          <exon e_start="79945" e_stop="79712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGGGTAAGTTGTGTCCTGGTCTTCCAATCTAGAGCTGTAAATGTCAAGTAGAAAATGTTAATCTTATGCAAATCTGTATACGCATTCTTGTTCAATCCTTGATTTGACTTTCGTTTTTCTTCAATGATCCAGCTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATGGTAAGGATTTTGTCACTGCAAAGA</genome_strand>
        <mrna_strand>GCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGG.................................................................................................................................CTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATGGTAAGGATTTTGTCACTGCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E218866" ref_strand="+" ref_description="SGN-E218866 [cLEL-18-E14]">
      <seq>tttttttttttttttttgtaacaaagttcattcctgaacattaaaaaactaaagggttgtcacattcaattatacaaatttggagggtgctatccaggttcatattgataagccagtcaatattgattacattccatgatttttgttattttgaacatttcgttgctatatcttcatgcaccactagcatataggcgtgtccactctcgtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="+" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="79445" stop="80246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79735" g_stop="79947" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="+" ref_id="SGN-E218866" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>213</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79735" e_stop="79947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTCCAGTTTTGTTGTAACAAAGTTCATTCCTGAACATTAAAAAACTAAAGGGTTGTCACATTCAATTATACAAATTTGGAGGGTGCTATCCAGGTTCATATTGATAAGCCAGTCAATATTGATTACATTCCATGATTTTTGTTATTTTGAACATTTCGTTGCTATATCTTCATGCACCACTAGCATATAGGCGTGTCCACTCCTTAGCT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTGTAACAAAGTTCATTCCTGAACATTAAAAAACTAAAGGGTTGTCACATTCAATTATACAAATTTGGAGGGTGCTATCCAGGTTCATATTGATAAGCCAGTCAATATTGATTACATTCCATGATTTTTGTTATTTTGAACATTTCGTTGCTATATCTTCATGCACCACTAGCATATAGGCGTGTCCACTCTCGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E236824" ref_strand="-" ref_description="SGN-E236824 [cLEL-7-J23]">
      <seq>accatccgaacatcgataagcttggaaggatatgccttgatattctcaaagacaaatggagtcctgctcttcagatccgtactgtacttttgagcattcaagcacttttgagtgctccaaatccagatgatccactctctaaaacattgctaagcactggaagtcaaatgaggttgaagctgttgaaacggctaaggagtggacacgcctatatgctagtggtgcatgaagatatagcaacgaaatgttcaaaataacaaaaatcatggaatgtaatcaatattgactggcttatcaatatgaacctggatagcaccctccaaatttgtataattgaatgtgacaaccctttagttttttaatgttcaggaatgaactttgtttcaacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="80381" stop="79445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80381" g_stop="80307" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="94" r_length="77" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80306" i_stop="80173" i_length="134">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80172" g_stop="80075" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="191" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79945" g_stop="79736" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="401" r_length="210" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E236824" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236824" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80381" e_stop="80307"/>
          <exon e_start="80172" e_stop="80075"/>
          <exon e_start="79945" e_stop="79736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTT--AAGGATATGCCTTGATATTCTCAAAGACAAATGGAGTCCTGCTCTTCAGATCCGTACTGTACTTTTGAGGTATTAATAATTTATCATGCTTTGAAATATGTTTCTCATCTCTGTGTACATCAAAAGATGCAAGACTGATGTTAATGAGAACCATACTAAGCTTTTAAGGTGTTAGAAGTTCAAAAAGTTTACTACTGTTTCAGCATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGGGTAAGTTGTGTCCTGGTCTTCCAATCTAGAGCTGTAAATGTCAAGTAGAAAATGTTAATCTTATGCAAATCTGTATACGCATTCTTGTTCAATCCTTGATTTGACTTTCGTTTTTCTTCAATGATCCAGCTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATG</genome_strand>
        <mrna_strand>AAGCTTGGAAGGATATGCCTTGATATTCTCAAAGACAAATGGAGTCCTGCTCTTCAGATCCGTACTGTACTTTTGAG......................................................................................................................................CATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCT-AAAACATTGCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGG.................................................................................................................................CTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTTCAACAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E618675" ref_strand="+" ref_description="SGN-E618675 [69356]">
      <seq>tgaatccactctctgaaaacattgctaagcactggaagtcaaatgaagttgaagctgttgaaacggctaaggagtggacacgcctatatgctagtggtgcatgaagatatagcaacgaaatattcaaaataacaaaaatcatggaatgtaatcaatattgactggcttatcaatatgacgcccggattgcacccttgaaattgtataattgaacatgacaccctttggttttttaatgttcaggaatgaactttgttgcaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="80381" stop="79445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80139" g_stop="80075" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79945" g_stop="79736" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="275" r_length="209" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="276" polyA_stop="297"/>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E618675" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E618675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80139" e_stop="80075"/>
          <exon e_start="79945" e_stop="79736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TG-ATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGGGTAAGTTGTGTCCTGGTCTTCCAATCTAGAGCTGTAAATGTCAAGTAGAAAATGTTAATCTTATGCAAATCTGTATACGCATTCTTGTTCAATCCTTGATTTGACTTTCGTTTTTCTTCAATGATCCAGCTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGA-ACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATG</genome_strand>
        <mrna_strand>TGAATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAAGTTGAAGCTGTTGAAACGG.................................................................................................................................CTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATATTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGACGCCCGGATTGCACCCTTGAAA-TTGTATAATTGAACATGAC-ACCCTTTGGTTTTTTAATGTTCAGGAATGAACTTTGTTGCAACAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-oT7dOg/sgn_ests_tomato_potato" ref_id="SGN-E614576" ref_strand="+" ref_description="SGN-E614576 [64364]">
      <seq>catccgaacatcgataagcttggaaggatatgtcttgatattcttaaagacaaatggagtcctgctcttcagatccgtacagtacttttgagcattcaagcacttttgagtgctccaaatccagatgatccactctctgaaaacattgctaagcactggaagtcaaatgaagttgaagctgttgaaacggctaaggagtggacacgcctatatgctagtggtgcatgaagatatagcaacgaaatattcaaaataacaaaaatcatggaatgtaatcaatattgactggcttatcaatatgacgcccgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0308M01-brg2U/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0308M01.1" temp_strand="-" temp_description="C07HBa0308M01.1  AC210364.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0308M01 upload_account_name:france">
        <position start="80381" stop="79534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80381" g_stop="80307" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="92" r_length="77" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80306" i_stop="80173" i_length="134">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80172" g_stop="80075" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="190" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79945" g_stop="79827" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="310" r_length="120" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0308M01.1" gen_strand="-" ref_id="SGN-E614576" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0308M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80381" e_stop="80307"/>
          <exon e_start="80172" e_stop="80075"/>
          <exon e_start="79945" e_stop="79827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTT--AAGGATATGCCTTGATATTCTCAAAGACAAATGGAGTCCTGCTCTTCAGATCCGTACTGTACTTTTGAGGTATTAATAATTTATCATGCTTTGAAATATGTTTCTCATCTCTGTGTACATCAAAAGATGCAAGACTGATGTTAATGAGAACCATACTAAGCTTTTAAGGTGTTAGAAGTTCAAAAAGTTTACTACTGTTTCAGCATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGGGTAAGTTGTGTCCTGGTCTTCCAATCTAGAGCTGTAAATGTCAAGTAGAAAATGTTAATCTTATGCAAATCTGTATACGCATTCTTGTTCAATCCTTGATTTGACTTTCGTTTTTCTTCAATGATCCAGCTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGA-ACCTGGA</genome_strand>
        <mrna_strand>AAGCTTGGAAGGATATGTCTTGATATTCTTAAAGACAAATGGAGTCCTGCTCTTCAGATCCGTACAGTACTTTTGAG......................................................................................................................................CATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAAGTTGAAGCTGTTGAAACGG.................................................................................................................................CTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATATTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGACGCCCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>226</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8275" PGL_stop="8821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8275" e_stop="8821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="8275" e_stop="8821" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8275" stop="8821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTATTCTCAAATTCTATTACACATATAGTCCTCTATCATGTCCACATTTAGCAACAAAATGGAACTTATACTCATGTTATTATGTACGTTGATTGTTACGTTGATGATTCAAGGATGTTGTCATGAGGTGATAAAAGGGCCAATTATTAGGCCTCATGGTCTAAGTTTACGCGAATTTGGTTACGATGAATCAACATTGGAGTATTACAAAAGAAGGGCAATGTTGTTAGATGTAGGAACCATGAGGGTTGCTCCACAAGGACCAGATGCTCAACATCACTCGCAATCACCAACAATGTCATAAGACACGAGGATGAATAAAATAGTGTGTATCTAAATTGATTAAGACATATGTTAGTACATGTGTGTGTGTTTATTGCAACTACGAGTAAAATTTAATATGTTATAGCAAGTTATCGCTCTATCTTTTTTGGGTTACGATATGTTATTATGTTGATATGCTTATTGTCTATGGCAGAATTGTGCCTGCCTTTTTGTTCCCTTTCATGTTGGCTTGTTGATCCATGCAATAAAAGTAGTTGAA</gDNA_template>
            <first_frame> I  L  F  S  N  S  I  T  H  I  V  L  Y  H  V  H  I  *  Q  Q  N  G  T  Y  T  H  V  I  M  Y  V  D  C  Y  V  D  D  S  R  M  L  S  *  G  D  K  R  A  N  Y  *  A  S  W  S  K  F  T  R  I  W  L  R  *  I  N  I  G  V  L  Q  K  K  G  N  V  V  R  C  R  N  H  E  G  C  S  T  R  T  R  C  S  T  S  L  A  I  T  N  N  V  I  R  H  E  D  E  *  N  S  V  Y  L  N  *  L  R  H  M  L  V  H  V  C  V  F  I  A  T  T  S  K  I  *  Y  V  I  A  S  Y  R  S  I  F  F  G  L  R  Y  V  I  M  L  I  C  L  L  S  M  A  E  L  C  L  P  F  C  S  L  S  C  W  L  V  D  P  C  N  K  S  S  *  </first_frame>
            <second_frame>  F  Y  S  Q  I  L  L  H  I  *  S  S  I  M  S  T  F  S  N  K  M  E  L  I  L  M  L  L  C  T  L  I  V  T  L  M  I  Q  G  C  C  H  E  V  I  K  G  P  I  I  R  P  H  G  L  S  L  R  E  F  G  Y  D  E  S  T  L  E  Y  Y  K  R  R  A  M  L  L  D  V  G  T  M  R  V  A  P  Q  G  P  D  A  Q  H  H  S  Q  S  P  T  M  S  *  D  T  R  M  N  K  I  V  C  I  *  I  D  *  D  I  C  *  Y  M  C  V  C  L  L  Q  L  R  V  K  F  N  M  L  *  Q  V  I  A  L  S  F  L  G  Y  D  M  L  L  C  *  Y  A  Y  C  L  W  Q  N  C  A  C  L  F  V  P  F  H  V  G  L  L  I  H  A  I  K  V  V  E </second_frame>
            <third_frame>   F  I  L  K  F  Y  Y  T  Y  S  P  L  S  C  P  H  L  A  T  K  W  N  L  Y  S  C  Y  Y  V  R  *  L  L  R  *  *  F  K  D  V  V  M  R  *  *  K  G  Q  L  L  G  L  M  V  *  V  Y  A  N  L  V  T  M  N  Q  H  W  S  I  T  K  E  G  Q  C  C  *  M  *  E  P  *  G  L  L  H  K  D  Q  M  L  N  I  T  R  N  H  Q  Q  C  H  K  T  R  G  *  I  K  *  C  V  S  K  L  I  K  T  Y  V  S  T  C  V  C  V  Y  C  N  Y  E  *  N  L  I  C  Y  S  K  L  S  L  Y  L  F  W  V  T  I  C  Y  Y  V  D  M  L  I  V  Y  G  R  I  V  P  A  F  L  F  P  F  M  L  A  C  *  S  M  Q  *  K  *  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8306" stop="8581"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSIMSTFSNKMELILMLLCTLIVTLMIQGCCHEVIKGPIIRPHGLSLREFGYDESTLEYYKRRAMLLDVGTMRVAPQGPDAQHHSQSPTMS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="11547" PGL_stop="12220"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11547" e_stop="12220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="11547" e_stop="12220" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11547" stop="12220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11547" stop="12184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11669" stop="12130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11830" stop="12176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11920" stop="12213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584217" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCAATTGCTTTTTCCTCTTTTTCCCTGAAAAAGATAAAATCTCCAATCCCACTCCCCAAATTTACAAAATCCTCAAAATTTAATTTTCTTATTTTCTCAATAGATCCTTCAACTTTTCGTAATTTTTGTTTTTGTCTCTCTCTTCGGAAAAACCCTAGTTCCCTACTTCTTCCATTTTCCCTGAAAATATCGATTTCGATCCAGCTAAGGTTTTCCAGTTTTTCCTTTCAAATTCATGGGGTTTTAGGAGGAAAGTTTCGATTTTTTCTGTTTTTTTACAATCCCAGTTGTTGTGTTTTGTGCTTCGTGTTTCGTTTGTTTTAGGGTTAGGGTTTAGTTTTTTCATCCCTTTTGGTGGTTGTTGGGTTGTGATTACATGTATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATCACAAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGCTCCGGCCGCCACAGCCGCTGTTAGCTCAGCCGCAGCTGCACCGGAGGTTATTTCGAATAGCGGGAGGGATACGAACGAGAATGATGAGGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGTTCGATTGTTAAAGGTGTGATAGGGGGTGAGCAAGTAGCTCTGAGTAATG</gDNA_template>
            <first_frame> S  Q  L  L  F  P  L  F  P  *  K  R  *  N  L  Q  S  H  S  P  N  L  Q  N  P  Q  N  L  I  F  L  F  S  Q  *  I  L  Q  L  F  V  I  F  V  F  V  S  L  F  G  K  T  L  V  P  Y  F  F  H  F  P  *  K  Y  R  F  R  S  S  *  G  F  P  V  F  P  F  K  F  M  G  F  *  E  E  S  F  D  F  F  C  F  F  T  I  P  V  V  V  F  C  A  S  C  F  V  C  F  R  V  R  V  *  F  F  H  P  F  W  W  L  L  G  C  D  Y  M  Y  G  F  R  C  K  R  F  E  F  K  K  *  V  A  L  G  R  *  S  Q  S  L  Y  P  E  A  P  *  N  P  R  E  Y  *  Y  *  R  C  S  G  R  H  S  R  C  *  L  S  R  S  C  T  G  G  Y  F  E  *  R  E  G  Y  E  R  E  *  *  G  A  G  A  V  F  A  N  P  I  S  G  L  F  D  C  *  R  C  D  R  G  *  A  S  S  S  E  *   </first_frame>
            <second_frame>  L  N  C  F  F  L  F  F  P  E  K  D  K  I  S  N  P  T  P  Q  I  Y  K  I  L  K  I  *  F  S  Y  F  L  N  R  S  F  N  F  S  *  F  L  F  L  S  L  S  S  E  K  P  *  F  P  T  S  S  I  F  P  E  N  I  D  F  D  P  A  K  V  F  Q  F  F  L  S  N  S  W  G  F  R  R  K  V  S  I  F  S  V  F  L  Q  S  Q  L  L  C  F  V  L  R  V  S  F  V  L  G  L  G  F  S  F  F  I  P  F  G  G  C  W  V  V  I  T  C  M  D  S  D  A  N  D  L  N  S  R  N  R  L  R  W  G  D  N  H  K  V  Y  T  R  K  R  R  R  T  L  E  N  T  S  T  D  V  A  P  A  A  T  A  A  V  S  S  A  A  A  A  P  E  V  I  S  N  S  G  R  D  T  N  E  N  D  E  V  P  E  P  S  L  Q  T  Q  F  R  D  C  S  I  V  K  G  V  I  G  G  E  Q  V  A  L  S  N  </second_frame>
            <third_frame>   S  I  A  F  S  S  F  S  L  K  K  I  K  S  P  I  P  L  P  K  F  T  K  S  S  K  F  N  F  L  I  F  S  I  D  P  S  T  F  R  N  F  C  F  C  L  S  L  R  K  N  P  S  S  L  L  L  P  F  S  L  K  I  S  I  S  I  Q  L  R  F  S  S  F  S  F  Q  I  H  G  V  L  G  G  K  F  R  F  F  L  F  F  Y  N  P  S  C  C  V  L  C  F  V  F  R  L  F  *  G  *  G  L  V  F  S  S  L  L  V  V  V  G  L  *  L  H  V  W  I  Q  M  Q  T  I  *  I  Q  E  I  G  C  V  G  A  I  I  T  K  F  I  P  G  S  A  V  E  P  *  R  I  L  V  L  T  L  L  R  P  P  Q  P  L  L  A  Q  P  Q  L  H  R  R  L  F  R  I  A  G  G  I  R  T  R  M  M  R  C  R  S  R  L  C  K  P  N  F  G  I  V  R  L  L  K  V  *  *  G  V  S  K  *  L  *  V  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11707" stop="12219"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPTSSIFPENIDFDPAKVFQFFLSNSWGFRRKVSIFSVFLQSQLLCFVLRVSFVLGLGFSFFIPFGGCWVVITCMDSDANDLNSRNRLRWGDNHKVYTRKRRRTLENTSTDVAPAATAAVSSAAAAPEVISNSGRDTNENDEVPEPSLQTQFRDCSIVKGVIGGEQVALSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="12420" PGL_stop="17716"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13082" e_stop="13956"/>
            <exon e_start="14063" e_stop="14108"/>
            <exon e_start="14204" e_stop="14308"/>
            <exon e_start="14429" e_stop="14502"/>
            <exon e_start="17185" e_stop="17716"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.999" e_score="0.999"/>
          <exon-intron don_prob="0.766" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.662" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="13082" e_stop="13956" e_length="875"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14063" e_stop="14108" e_length="46"/>
          </exon>
          <intron i_serial="2" don_prob="0.766" acc_prob="0.999">
            <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14204" e_stop="14308" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="14429" e_stop="14502" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.662" acc_prob="0.998">
            <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17185" e_stop="17716" e_length="532"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13082" stop="13816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13956"/>
              <exon start="14063" stop="14094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13956"/>
              <exon start="14063" stop="14084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13525" stop="13956"/>
              <exon start="14063" stop="14108"/>
              <exon start="14204" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13634" stop="13956"/>
              <exon start="14063" stop="14108"/>
              <exon start="14204" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13907" stop="13956"/>
              <exon start="14063" stop="14108"/>
              <exon start="14204" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14205" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389479" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14229" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550095" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17245" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17252" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17253" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237071" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTG : AACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTG : GTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG : ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT : GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCGGCAAGTTATTAACTGACGCA</gDNA_template>
            <first_frame> L  I  S  T  D  F  R  F  L  G  I  V  A  A  C  F  R  G  *  *  N  T  S  M  V  G  C  L  M  S  Q  *  T  *  N  L  L  G  Y  M  I  I  M  T  S  L  S  I  L  W  I  W  A  P  L  R  L  G  Y  L  M  I  G  T  S  L  Q  W  N  L  R  R  M  Y  D  S  S  F  V  M  P  *  L  I  I  L  E  G  K  M  Y  M  L  W  L  N  S  Y  Q  R  S  S  K  R  D  G  Q  L  *  R  L  S  T  I  Q  I  G  G  T  K  C  I  M  M  L  V  L  P  L  P  P  Q  E  *  P  L  I  L  L  L  F  S  T  P  Q  C  L  L  V  L  L  L  H  M  P  V  N  C  I  R  W  I  D  L  S  Q  *  L  G  R  L  I  P  R  *  R  L  Q  I  *  L  M  L  L  G  H  Q  F  L  R  N  R  R  Q  K  I  S  I  R  E  T  *  R  M  R  K  S  R  S  L  A  L  I  F  R  I  Y  L  Q  K  S  L  M  Q  L  F  R  *  L  R  R  G  T  P  H  L  V  K  T  T  M  R  L  K  *  I  *  I  V  L  M  Q  K  H  S  G  S  L  I  D  L  *  Q  I  S  K  R  V  L  A  S  I  R  E  K  L  N  F  F  E  P  G  K  E  L  L  R  L  L  E  M  * :   T  L  H  Q  W  L  L  M  H  *  K  K  M  E  L  :  V  K  K  I  Q  L  L  L  P  L  K  V  E  D  R  R  I  V  Q  V  A  A  Q  V  V  P  A  V  I  Q  A  H  P  L  V  :  I  L  I  V  I  V  L  Q  H  L  D  Q  R  R  R  N  H  P  G  H  D  K  L  L  M :   K  F  G  L  *  M  H  Q  S  R  R  L  F  K  H  S  S  E  R  R  R  V  A  L  A  *  *  V  S  F  K  N  F  K  Y  G  R  K  *  S  P  S  E  F  G  S  M  L  A  V  G  A  H  I  L  L  C  H  I  A  C  H  R  Q  A  I  Y  R  G  R  W  L  W  W  *  Y  C  E  G  I  *  H  L  F  V  E  L  K  Y  C  V  L  K  K  S  M  F  S  V  S  L  S  T  I  W  Q  D  H  D  S  C  K  V  L  Q  L  *  P  G  C  T  K  S  I  I  G  *  *  C  V  L  F  V  C  F  G  S  I  Y  C  I  V  I  S  P  S  G  I  Y  M  E  I  T  V  G  G  C  T  Y  F  L  N  F  L  S  G  I  I  I  C  G  K  L  L  T  D  A </first_frame>
            <second_frame>  *  *  A  Q  T  S  G  F  *  E  L  *  Q  L  A  S  E  V  N  E  T  Q  A  W  L  G  V  *  *  A  S  E  R  E  I  S  W  A  T  *  L  S  *  H  H  *  A  S  Y  G  F  G  H  H  *  D  *  V  I  *  *  L  V  Q  V  S  N  G  I  C  G  G  C  T  T  R  L  S  *  C  H  D  L  *  S  *  R  A  R  C  T  C  Y  G  *  T  V  I  R  D  L  R  R  E  M  G  S  Y  R  G  *  V  P  F  R  L  E  V  P  N  V  S  *  C  W  C  S  H  S  H  L  K  N  D  L  L  S  S  S  F  S  P  H  P  S  V  F  S  F  S  C  S  T  C  P  S  T  A  S  V  G  *  I  *  V  N  D  *  A  G  *  S  Q  D  E  D  F  K  Y  S  S  C  Y  *  D  T  S  S  *  E  T  E  G  K  R  S  Q  *  E  R  H  D  V  *  G  K  A  E  A  *  H  *  S  S  E  F  T  F  R  K  A  *  C  N  C  S  D  N  *  E  E  E  H  R  T  *  S  R  Q  R  *  D  *  S  R  Y  R  *  C  *  C  R  N  T  L  G  A  *  *  I  C  N  K  F  Q  K  E  F  *  Q  V  *  E  K  S  *  T  S  S  S  Q  G  R  S  C  S  G  C  S  K  C   : E  P  Y  I  N  G  C  *  C  T  E  R  K  W  N  W :   *  K  R  Y  S  S  C  Y  P  *  R  W  K  T  G  G  *  C  K  *  Q  L  K  *  F  Q  Q  *  F  R  L  I  L  *  * :   F  *  *  *  *  F  F  S  I  W  I  R  G  G  A  I  T  Q  D  M  T  S  S  *   : *  N  L  D  Y  E  C  I  R  A  D  G  C  S  N  T  H  L  K  D  V  V  W  L  L  H  D  K  F  L  S  R  T  S  S  M  G  G  S  E  V  L  V  N  L  G  A  C  *  L  L  A  L  T  F  F  S  V  I  *  L  V  I  D  K  L  Y  T  E  G  G  G  Y  G  G  S  T  V  R  V  F  N  T  C  L  L  N  *  N  I  V  C  *  K  N  L  C  F  Q  C  H  C  Q  Q  F  G  R  I  M  I  H  A  R  S  C  S  C  N  L  D  V  Q  R  A  *  *  A  D  D  V  Y  C  L  F  A  L  G  V  F  I  A  L  *  Y  H  H  Q  G  F  I  W  K  *  Q  *  E  G  V  H  T  F  S  I  S  C  L  A  S  *  Y  A  A  S  Y  *  L  T   </second_frame>
            <third_frame>   D  K  H  R  L  Q  V  F  R  N  C  S  S  L  L  Q  R  L  M  K  H  K  H  G  W  V  F  N  E  P  V  N  V  K  S  L  G  L  H  D  Y  H  D  I  I  K  H  P  M  D  L  G  T  I  K  T  R  L  S  D  D  W  Y  K  S  P  M  E  F  A  E  D  V  R  L  V  F  R  N  A  M  T  Y  N  P  R  G  Q  D  V  H  V  M  A  E  Q  L  S  E  I  F  E  E  R  W  A  V  I  E  A  E  Y  H  S  D  W  R  Y  Q  M  Y  H  D  V  G  A  P  T  P  T  S  R  M  T  S  Y  P  P  P  F  L  H  T  P  V  S  S  R  S  L  A  P  H  A  R  Q  L  H  P  L  D  R  S  E  S  M  T  R  P  V  N  P  K  M  K  T  S  N  I  A  H  V  T  R  T  P  V  P  K  K  P  K  A  K  D  L  N  K  R  D  M  T  Y  E  E  K  Q  K  L  S  T  N  L  Q  N  L  P  S  E  K  L  D  A  I  V  Q  I  I  K  K  R  N  T  A  L  S  Q  D  N  D  E  I  E  V  D  I  D  S  V  D  A  E  T  L  W  E  L  D  R  F  V  T  N  F  K  K  S  F  S  K  Y  K  R  K  A  E  L  L  R  A  R  E  G  A  A  Q  A  A  R  N  V  :  N  P  T  S  M  V  A  D  A  L  K  E  N  G  T   : G  E  K  D  T  A  P  A  T  L  E  G  G  R  P  A  D  S  A  S  S  S  S  S  S  S  S  S  D  S  G  S  S  S  S   : D  S  D  S  D  S  S  S  A  S  G  S  E  A  A  Q  S  P  R  T  *  Q  A  L  D  :  E  I  W  I  M  N  A  S  E  Q  T  A  V  Q  T  L  I  *  K  T  S  C  G  S  C  M  I  S  F  F  Q  E  L  Q  V  W  E  E  V  K  S  *  *  I  W  E  H  V  S  C  W  R  S  H  S  S  L  S  Y  S  L  S  S  T  S  Y  I  Q  R  E  V  V  M  V  V  V  L  *  G  Y  L  T  P  V  C  *  I  K  I  L  C  A  E  K  I  Y  V  F  S  V  I  V  N  N  L  A  G  S  *  F  M  Q  G  P  A  A  V  T  W  M  Y  K  E  H  N  R  L  M  M  C  I  V  C  L  L  W  E  Y  L  L  H  C  N  I  T  I  R  D  L  Y  G  N  N  S  R  R  V  Y  I  L  S  Q  F  L  V  W  H  H  N  M  R  Q  V  I  N  *  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13084" stop="13956"/>
                    <exon start="14063" stop="14108"/>
                    <exon start="14204" stop="14308"/>
                    <exon start="14429" stop="14490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1083</number_coding_nucleotides>
                  <number_encoded_amino_acids>361</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKHRLQVFRNCSSLLQRLMKHKHGWVFNEPVNVKSLGLHDYHDIIKHPMDLGTIKTRLSDDWYKSPMEFAEDVRLVFRNAMTYNPRGQDVHVMAEQLSEIFEERWAVIEAEYHSDWRYQMYHDVGAPTPTSRMTSYPPPFLHTPVSSRSLAPHARQLHPLDRSESMTRPVNPKMKTSNIAHVTRTPVPKKPKAKDLNKRDMTYEEKQKLSTNLQNLPSEKLDAIVQIIKKRNTALSQDNDEIEVDIDSVDAETLWELDRFVTNFKKSFSKYKRKAELLRAREGAAQAARNVNPTSMVADALKENGTGEKDTAPATLEGGRPADSASSSSSSSSSDSGSSSSDSDSDSSSASGSEAAQSPRT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17512" stop="17712"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FMQGPAAVTWMYKEHNRLMMCIVCLLWEYLLHCNITIRDLYGNNSRRVYILSQFLVWHHNMRQVIN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="13082" e_stop="13956"/>
            <exon e_start="14063" e_stop="14108"/>
            <exon e_start="14204" e_stop="14308"/>
            <exon e_start="14429" e_stop="14502"/>
            <exon e_start="17185" e_stop="17359"/>
            <exon e_start="17393" e_stop="17696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.999" e_score="0.999"/>
          <exon-intron don_prob="0.766" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="0.962"/>
          <exon-intron don_prob="0.662" acc_prob="0.998" e_score="0.973"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.891"/>
          <exon-only e_score="0.878"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="13082" e_stop="13956" e_length="875"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13957" i_stop="14062" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14063" e_stop="14108" e_length="46"/>
          </exon>
          <intron i_serial="2" don_prob="0.766" acc_prob="0.999">
            <gDNA_intron_boundary i_start="14109" i_stop="14203" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.962">
            <gDNA_exon_boundary e_start="14204" e_stop="14308" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="14309" i_stop="14428" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="0.973">
            <gDNA_exon_boundary e_start="14429" e_stop="14502" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.662" acc_prob="0.998">
            <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682"/>
          </intron>
          <exon e_serial="5" e_score="0.891">
            <gDNA_exon_boundary e_start="17185" e_stop="17359" e_length="175"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17360" i_stop="17392" i_length="33"/>
          </intron>
          <exon e_serial="6" e_score="0.878">
            <gDNA_exon_boundary e_start="17393" e_stop="17696" e_length="304"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13082" stop="13816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13956"/>
              <exon start="14063" stop="14094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13956"/>
              <exon start="14063" stop="14084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13273" stop="13749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14094" stop="14108"/>
              <exon start="14204" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17359"/>
              <exon start="17393" stop="17696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420910" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14246" stop="14308"/>
              <exon start="14429" stop="14502"/>
              <exon start="17185" stop="17359"/>
              <exon start="17393" stop="17696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420883" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGATAAGCACAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAACACAAGCATGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCTCTTGGGCTACATGATTATCATGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGATGATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTCGTCTTTCGTAATGCCATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATCTTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACCATTCAGATTGGAGGTACCAAATGTATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATCCTCCTCCTTTTCTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCGTTGGATAGATCTGAGTCAATGACTAGGCCGGTTAATCCCAAGATGAAGACTTCAAATATAGCTCATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGACATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAGCTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACCGCACTTAGTCAAGACAACGATGAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTTGTAACAAATTTCAAAAAGAGTTTTAGCAAGTATAAGAGAAAAGCTGAACTTCTTCGAGCCAGGGAAGGAGCTGCTCAGGCTGCTCGAAATGTG : AACCCTACATCAATGGTTGCTGATGCACTGAAAGAAAATGGAACTG : GTGAAAAAGATACAGCTCCTGCTACCCTTGAAGGTGGAAGACCGGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCTAGTG : ATTCTGATAGTGATAGTTCTTCAGCATCTGGATCAGAGGCGGCGCAATCACCCAGGACATGACAAGCTCTTGAT : GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCAT : AGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCAATTTCTTGTCTGGCATCATAATATGCG</gDNA_template>
            <first_frame> L  I  S  T  D  F  R  F  L  G  I  V  A  A  C  F  R  G  *  *  N  T  S  M  V  G  C  L  M  S  Q  *  T  *  N  L  L  G  Y  M  I  I  M  T  S  L  S  I  L  W  I  W  A  P  L  R  L  G  Y  L  M  I  G  T  S  L  Q  W  N  L  R  R  M  Y  D  S  S  F  V  M  P  *  L  I  I  L  E  G  K  M  Y  M  L  W  L  N  S  Y  Q  R  S  S  K  R  D  G  Q  L  *  R  L  S  T  I  Q  I  G  G  T  K  C  I  M  M  L  V  L  P  L  P  P  Q  E  *  P  L  I  L  L  L  F  S  T  P  Q  C  L  L  V  L  L  L  H  M  P  V  N  C  I  R  W  I  D  L  S  Q  *  L  G  R  L  I  P  R  *  R  L  Q  I  *  L  M  L  L  G  H  Q  F  L  R  N  R  R  Q  K  I  S  I  R  E  T  *  R  M  R  K  S  R  S  L  A  L  I  F  R  I  Y  L  Q  K  S  L  M  Q  L  F  R  *  L  R  R  G  T  P  H  L  V  K  T  T  M  R  L  K  *  I  *  I  V  L  M  Q  K  H  S  G  S  L  I  D  L  *  Q  I  S  K  R  V  L  A  S  I  R  E  K  L  N  F  F  E  P  G  K  E  L  L  R  L  L  E  M  * :   T  L  H  Q  W  L  L  M  H  *  K  K  M  E  L  :  V  K  K  I  Q  L  L  L  P  L  K  V  E  D  R  R  I  V  Q  V  A  A  Q  V  V  P  A  V  I  Q  A  H  P  L  V  :  I  L  I  V  I  V  L  Q  H  L  D  Q  R  R  R  N  H  P  G  H  D  K  L  L  M :   K  F  G  L  *  M  H  Q  S  R  R  L  F  K  H  S  S  E  R  R  R  V  A  L  A  *  *  V  S  F  K  N  F  K  Y  G  R  K  *  S  P  S  E  F  G  S  M  L  A  V  G  A  H  I  L  L  C  H  :  R  W  L  W  W  *  Y  C  E  G  I  *  H  L  F  V  E  L  K  Y  C  V  L  K  K  S  M  F  S  V  S  L  S  T  I  W  Q  D  H  D  S  C  K  V  L  Q  L  *  P  G  C  T  K  S  I  I  G  *  *  C  V  L  F  V  C  F  G  S  I  Y  C  I  V  I  S  P  S  G  I  Y  M  E  I  T  V  G  G  C  T  Y  F  L  N  F  L  S  G  I  I  I  C  </first_frame>
            <second_frame>  *  *  A  Q  T  S  G  F  *  E  L  *  Q  L  A  S  E  V  N  E  T  Q  A  W  L  G  V  *  *  A  S  E  R  E  I  S  W  A  T  *  L  S  *  H  H  *  A  S  Y  G  F  G  H  H  *  D  *  V  I  *  *  L  V  Q  V  S  N  G  I  C  G  G  C  T  T  R  L  S  *  C  H  D  L  *  S  *  R  A  R  C  T  C  Y  G  *  T  V  I  R  D  L  R  R  E  M  G  S  Y  R  G  *  V  P  F  R  L  E  V  P  N  V  S  *  C  W  C  S  H  S  H  L  K  N  D  L  L  S  S  S  F  S  P  H  P  S  V  F  S  F  S  C  S  T  C  P  S  T  A  S  V  G  *  I  *  V  N  D  *  A  G  *  S  Q  D  E  D  F  K  Y  S  S  C  Y  *  D  T  S  S  *  E  T  E  G  K  R  S  Q  *  E  R  H  D  V  *  G  K  A  E  A  *  H  *  S  S  E  F  T  F  R  K  A  *  C  N  C  S  D  N  *  E  E  E  H  R  T  *  S  R  Q  R  *  D  *  S  R  Y  R  *  C  *  C  R  N  T  L  G  A  *  *  I  C  N  K  F  Q  K  E  F  *  Q  V  *  E  K  S  *  T  S  S  S  Q  G  R  S  C  S  G  C  S  K  C   : E  P  Y  I  N  G  C  *  C  T  E  R  K  W  N  W :   *  K  R  Y  S  S  C  Y  P  *  R  W  K  T  G  G  *  C  K  *  Q  L  K  *  F  Q  Q  *  F  R  L  I  L  *  * :   F  *  *  *  *  F  F  S  I  W  I  R  G  G  A  I  T  Q  D  M  T  S  S  *   : *  N  L  D  Y  E  C  I  R  A  D  G  C  S  N  T  H  L  K  D  V  V  W  L  L  H  D  K  F  L  S  R  T  S  S  M  G  G  S  E  V  L  V  N  L  G  A  C  *  L  L  A  L  T  F  F  S  V  I :   G  G  Y  G  G  S  T  V  R  V  F  N  T  C  L  L  N  *  N  I  V  C  *  K  N  L  C  F  Q  C  H  C  Q  Q  F  G  R  I  M  I  H  A  R  S  C  S  C  N  L  D  V  Q  R  A  *  *  A  D  D  V  Y  C  L  F  A  L  G  V  F  I  A  L  *  Y  H  H  Q  G  F  I  W  K  *  Q  *  E  G  V  H  T  F  S  I  S  C  L  A  S  *  Y  A </second_frame>
            <third_frame>   D  K  H  R  L  Q  V  F  R  N  C  S  S  L  L  Q  R  L  M  K  H  K  H  G  W  V  F  N  E  P  V  N  V  K  S  L  G  L  H  D  Y  H  D  I  I  K  H  P  M  D  L  G  T  I  K  T  R  L  S  D  D  W  Y  K  S  P  M  E  F  A  E  D  V  R  L  V  F  R  N  A  M  T  Y  N  P  R  G  Q  D  V  H  V  M  A  E  Q  L  S  E  I  F  E  E  R  W  A  V  I  E  A  E  Y  H  S  D  W  R  Y  Q  M  Y  H  D  V  G  A  P  T  P  T  S  R  M  T  S  Y  P  P  P  F  L  H  T  P  V  S  S  R  S  L  A  P  H  A  R  Q  L  H  P  L  D  R  S  E  S  M  T  R  P  V  N  P  K  M  K  T  S  N  I  A  H  V  T  R  T  P  V  P  K  K  P  K  A  K  D  L  N  K  R  D  M  T  Y  E  E  K  Q  K  L  S  T  N  L  Q  N  L  P  S  E  K  L  D  A  I  V  Q  I  I  K  K  R  N  T  A  L  S  Q  D  N  D  E  I  E  V  D  I  D  S  V  D  A  E  T  L  W  E  L  D  R  F  V  T  N  F  K  K  S  F  S  K  Y  K  R  K  A  E  L  L  R  A  R  E  G  A  A  Q  A  A  R  N  V  :  N  P  T  S  M  V  A  D  A  L  K  E  N  G  T   : G  E  K  D  T  A  P  A  T  L  E  G  G  R  P  A  D  S  A  S  S  S  S  S  S  S  S  S  D  S  G  S  S  S  S   : D  S  D  S  D  S  S  S  A  S  G  S  E  A  A  Q  S  P  R  T  *  Q  A  L  D  :  E  I  W  I  M  N  A  S  E  Q  T  A  V  Q  T  L  I  *  K  T  S  C  G  S  C  M  I  S  F  F  Q  E  L  Q  V  W  E  E  V  K  S  *  *  I  W  E  H  V  S  C  W  R  S  H  S  S  L  S   : *  V  V  M  V  V  V  L  *  G  Y  L  T  P  V  C  *  I  K  I  L  C  A  E  K  I  Y  V  F  S  V  I  V  N  N  L  A  G  S  *  F  M  Q  G  P  A  A  V  T  W  M  Y  K  E  H  N  R  L  M  M  C  I  V  C  L  L  W  E  Y  L  L  H  C  N  I  T  I  R  D  L  Y  G  N  N  S  R  R  V  Y  I  L  S  Q  F  L  V  W  H  H  N  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13084" stop="13956"/>
                    <exon start="14063" stop="14108"/>
                    <exon start="14204" stop="14308"/>
                    <exon start="14429" stop="14490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1083</number_coding_nucleotides>
                  <number_encoded_amino_acids>361</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKHRLQVFRNCSSLLQRLMKHKHGWVFNEPVNVKSLGLHDYHDIIKHPMDLGTIKTRLSDDWYKSPMEFAEDVRLVFRNAMTYNPRGQDVHVMAEQLSEIFEERWAVIEAEYHSDWRYQMYHDVGAPTPTSRMTSYPPPFLHTPVSSRSLAPHARQLHPLDRSESMTRPVNPKMKTSNIAHVTRTPVPKKPKAKDLNKRDMTYEEKQKLSTNLQNLPSEKLDAIVQIIKKRNTALSQDNDEIEVDIDSVDAETLWELDRFVTNFKKSFSKYKRKAELLRAREGAAQAARNVNPTSMVADALKENGTGEKDTAPATLEGGRPADSASSSSSSSSSDSGSSSSDSDSDSSSASGSEAAQSPRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="12420" e_stop="12821"/>
            <exon e_start="14472" e_stop="14502"/>
            <exon e_start="17185" e_stop="17669"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.948"/>
          <exon-intron don_prob="0.662" acc_prob="0.998" e_score="0.968"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="12420" e_stop="12821" e_length="402"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12822" i_stop="14471" i_length="1650"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="14472" e_stop="14502" e_length="31"/>
          </exon>
          <intron i_serial="2" don_prob="0.662" acc_prob="0.998">
            <gDNA_intron_boundary i_start="14503" i_stop="17184" i_length="2682"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17185" e_stop="17669" e_length="485"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12420" stop="12821"/>
              <exon start="14472" stop="14502"/>
              <exon start="17185" stop="17338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E411375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12420" stop="12821"/>
              <exon start="14472" stop="14502"/>
              <exon start="17185" stop="17324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17245" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17252" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17253" stop="17669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237071" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGAAGTCAGCCAGCAATGCAGAATCATAGAGATGAACCACAAAGTGACAATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTCAAGATAGAATTAGGATTAATTTAACTGGAGTGAGGTCCAGTGATGAGATTAGAGAGCTCGGTATGAGCTTAGAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAGCTGACAACATATAGGACTAGTATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACTTTCCCTGGTAGTATTAATGCTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATACACAGTATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGC : GCAATCACCCAGGACATGACAAGCTCTTGAT : GAAATTTGGATTATGAATGCATCAGAGCAGACGGCTGTTCAAACACTCATCTGAAAGACGTCGTGTGGCTCTTGCATGATAAGTTTCTTTCAAGAACTTCAAGTATGGGAGGAAGTGAAGTCCTAGTGAATTTGGGAGCATGTTAGCTGTTGGCGCTCACATTCTTCTCTGTCATATAGCTTGTCATCGACAAGCTATATACAGAGGGAGGTGGTTATGGTGGTAGTACTGTGAGGGTATTTAACACCTGTTTGTTGAATTAAAATATTGTGTGCTGAAAAAATCTATGTTTTCAGTGTCATTGTCAACAATTTGGCAGGATCATGATTCATGCAAGGTCCTGCAGCTGTAACCTGGATGTACAAAGAGCATAATAGGCTGATGATGTGTATTGTTTGTTTGCTTTGGGAGTATTTATTGCATTGTAATATCACCATCAGGGATTTATATGGAAATAACAGTAGGAGGGTGTACATACTTTCTCA</gDNA_template>
            <first_frame> R  K  S  A  S  N  A  E  S  *  R  *  T  T  K  *  Q  S  *  N  G  E  W  V  W  *  A  G  Y  F  K  N  S  R  *  N  *  D  *  F  N  W  S  E  V  Q  *  *  D  *  R  A  R  Y  E  L  R  E  *  A  *  S  S  *  G  L  G  K  A  A  *  S  *  T  A  S  A  D  N  I  *  D  *  Y  K  W  W  *  Y  *  C  W  *  C  Y  Y  F  P  W  *  Y  *  C  W  *  Y  Y  Y  C  P  W  W  F  Y  *  L  L  Q  S  Y  T  V  Y  G  *  W  C  D  Q  E  *  V  F  S  :  A  I  T  Q  D  M  T  S  S  *   : *  N  L  D  Y  E  C  I  R  A  D  G  C  S  N  T  H  L  K  D  V  V  W  L  L  H  D  K  F  L  S  R  T  S  S  M  G  G  S  E  V  L  V  N  L  G  A  C  *  L  L  A  L  T  F  F  S  V  I  *  L  V  I  D  K  L  Y  T  E  G  G  G  Y  G  G  S  T  V  R  V  F  N  T  C  L  L  N  *  N  I  V  C  *  K  N  L  C  F  Q  C  H  C  Q  Q  F  G  R  I  M  I  H  A  R  S  C  S  C  N  L  D  V  Q  R  A  *  *  A  D  D  V  Y  C  L  F  A  L  G  V  F  I  A  L  *  Y  H  H  Q  G  F  I  W  K  *  Q  *  E  G  V  H  T  F  S </first_frame>
            <second_frame>  G  S  Q  P  A  M  Q  N  H  R  D  E  P  Q  S  D  N  L  E  M  E  N  G  Y  G  K  P  V  I  S  R  I  Q  D  R  I  R  I  N  L  T  G  V  R  S  S  D  E  I  R  E  L  G  M  S  L  E  S  E  L  D  Q  V  R  G  L  V  K  Q  L  E  A  K  Q  L  Q  L  T  T  Y  R  T  S  I  N  G  G  N  I  N  A  G  S  V  T  T  F  P  G  S  I  N  A  G  S  I  T  T  V  P  G  G  S  I  S  S  Y  S  H  T  Q  Y  M  D  D  G  V  I  K  N  R  S  L  A :   Q  S  P  R  T  *  Q  A  L  D  :  E  I  W  I  M  N  A  S  E  Q  T  A  V  Q  T  L  I  *  K  T  S  C  G  S  C  M  I  S  F  F  Q  E  L  Q  V  W  E  E  V  K  S  *  *  I  W  E  H  V  S  C  W  R  S  H  S  S  L  S  Y  S  L  S  S  T  S  Y  I  Q  R  E  V  V  M  V  V  V  L  *  G  Y  L  T  P  V  C  *  I  K  I  L  C  A  E  K  I  Y  V  F  S  V  I  V  N  N  L  A  G  S  *  F  M  Q  G  P  A  A  V  T  W  M  Y  K  E  H  N  R  L  M  M  C  I  V  C  L  L  W  E  Y  L  L  H  C  N  I  T  I  R  D  L  Y  G  N  N  S  R  R  V  Y  I  L  S   </second_frame>
            <third_frame>   E  V  S  Q  Q  C  R  I  I  E  M  N  H  K  V  T  I  L  K  W  R  M  G  M  V  S  R  L  F  Q  E  F  K  I  E  L  G  L  I  *  L  E  *  G  P  V  M  R  L  E  S  S  V  *  A  *  R  V  S  L  I  K  L  G  A  W  *  S  S  L  K  L  N  S  F  S  *  Q  H  I  G  L  V  *  M  V  V  I  L  M  L  V  V  L  L  L  S  L  V  V  L  M  L  V  V  L  L  L  S  L  V  V  L  L  A  L  T  V  I  H  S  I  W  M  M  V  *  S  R  I  G  L  *   : R  N  H  P  G  H  D  K  L  L  M :   K  F  G  L  *  M  H  Q  S  R  R  L  F  K  H  S  S  E  R  R  R  V  A  L  A  *  *  V  S  F  K  N  F  K  Y  G  R  K  *  S  P  S  E  F  G  S  M  L  A  V  G  A  H  I  L  L  C  H  I  A  C  H  R  Q  A  I  Y  R  G  R  W  L  W  W  *  Y  C  E  G  I  *  H  L  F  V  E  L  K  Y  C  V  L  K  K  S  M  F  S  V  S  L  S  T  I  W  Q  D  H  D  S  C  K  V  L  Q  L  *  P  G  C  T  K  S  I  I  G  *  *  C  V  L  F  V  C  F  G  S  I  Y  C  I  V  I  S  P  S  G  I  Y  M  E  I  T  V  G  G  C  T  Y  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12421" stop="12821"/>
                    <exon start="14472" stop="14490"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSQPAMQNHRDEPQSDNLEMENGYGKPVISRIQDRIRINLTGVRSSDEIRELGMSLESELDQVRGLVKQLEAKQLQLTTYRTSINGGNINAGSVTTFPGSINAGSITTVPGGSISSYSHTQYMDDGVIKNRSLAQSPRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="20979" PGL_stop="17793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20979" e_stop="20586"/>
            <exon e_start="20009" e_stop="19836"/>
            <exon e_start="19726" e_stop="19558"/>
            <exon e_start="19440" e_stop="19379"/>
            <exon e_start="19195" e_stop="19074"/>
            <exon e_start="18829" e_stop="18712"/>
            <exon e_start="18230" e_stop="17793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.987"/>
          <exon-intron don_prob="0.718" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="20979" e_stop="20586" e_length="394"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20009" e_stop="19836" e_length="174"/>
          </exon>
          <intron i_serial="2" don_prob="0.718" acc_prob="0.960">
            <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19726" e_stop="19558" e_length="169"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19440" e_stop="19379" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19195" e_stop="19074" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18829" e_stop="18712" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="18230" e_stop="17793" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20979" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20900" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321304" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20896" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20893" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729478" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20893" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20890" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20888" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20888" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20888" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20886" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20885" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20881" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20879" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19610"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20879" stop="20586"/>
              <exon start="20009" stop="19915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20876" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20876" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20876" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320360" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20876" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20876" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20875" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20875" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20874" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20874" stop="20588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20873" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20869" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20869" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20869" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19610"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20863" stop="20586"/>
              <exon start="20009" stop="19880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20861" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20861" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20861" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444638" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20855" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20853" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20846" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20845" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20845" stop="20586"/>
              <exon start="20009" stop="19903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20844" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19430"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20844" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20843" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20841" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20840" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20840" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20840" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20840" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20839" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20839" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20838" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20836" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20833" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20830" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20830" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442833" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20830" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20830" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20829" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207294" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20826" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259678" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20823" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20811" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20808" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20806" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20764" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20739" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20735" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20685" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20651" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20601" stop="20586"/>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19991" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19950" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19931" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19929" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19927" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19903" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19902" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19862" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19844" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19712" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19698" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19697" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19690" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19661" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19654" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19617" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19605" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19591" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19573" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373527" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19428" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420411" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19173" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19166" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19108" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267881" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292054" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18824" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18809" stop="18712"/>
              <exon start="18230" stop="17932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18799" stop="18712"/>
              <exon start="18230" stop="17793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18798" stop="18712"/>
              <exon start="18230" stop="17811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18780" stop="18712"/>
              <exon start="18230" stop="17827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18776" stop="18712"/>
              <exon start="18230" stop="17824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18772" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217002" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18766" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220922" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18765" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18763" stop="18712"/>
              <exon start="18230" stop="17822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238662" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18757" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18752" stop="18712"/>
              <exon start="18230" stop="17812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18747" stop="18712"/>
              <exon start="18230" stop="17881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18166" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227414" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18103" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354625" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGTTATCACAAATGAAAGTTTTGACAGGCTTTTTTTGTTGCCAATAAATAGTGCCCACACAGTAACACACCACAACTCCTAATTTATTTTCTCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG : GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT : GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG : AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA : GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC : CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG : GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</gDNA_template>
            <first_frame> S  L  S  Q  M  K  V  L  T  G  F  F  C  C  Q  *  I  V  P  T  Q  *  H  T  T  T  P  N  L  F  S  P  P  *  L  L  P  F  P  H  F  F  C  I  F  R  N  E  D  L  H  V  E  I  H  R  P  P  E  L  H  C  R  S  I  L  C  I  S  P  W  I  R  I  G  I  R  A  G  E  E  S  C  S  F  G  G  S  R  R  D  W  T  A  F  I  S  S  N  E  A  *  P  F  S  I  Q  P  F  T  L  R  Y  R  R  Y  S  R  C  C  R  R  C  *  S  H  Q  H  Q  I  *   : G  C  R  F  C  R  R  R  A  A  R  A  G  T  G  R  S  *  C  C  Y  H  S  C  W  C  A  P  K  A  W  Y  D  P  R  *  S  V  Q  H  *  C  G  Y  C  *  I  S  M  H  G  H  C  *  V  L  P  Q   : C  S  G  Q  Y  D  K  Q  P  S  E  F  H  C  P  Y  C  C  *  G  V  *  E  S  W  N  L  *  *  K  E  A  L  W  S  Y  H  A  *  C  G  *  G  Q  D  I  L  C  W  K  S  *  S  K  C  C  * :   G  Q  S  P  S  S  W  W  S  C  W  H  N  Y  P  P  I  I  F  S   : S  H  S  K  G  K  S  I  R  *  G  N  C  C  T  H  K  A  N  P  R  W  W  D  R  S  C  R  G  Q  G  W  K  G  F  S  H  P  L  N  G  :  L  C  W  G  Y  F  C  R  C  L  L  E  G  V  E  W  S  S  R  C  C  *  M  C  F  C  A  V  Q  C  H  R  A  S  L  L  R  I  Q   : G  K  T  W  E  K  W  S  G  G  S  P  R  V  G  S  T  *  R  L  R  E  A  R  T  *  G  S  *  A  R  A  A  L  L  H  *  K  G  N  Q  V  C  Q  R  K  L  K  K  Q  N  Y  G  L  V  F  Y  S  D  S  F  G  S  F  W  V  N  C  F  C  I  L  C  K  F  L  A  A  G  G  L  D  L  A  L  L  I  L  Y  P  T  F  L  Q  N  N  V  W  Q  T  G  G  L  S  H  L  P  *  C  G  G  V  I  L  T  *  I  V  F  Q  L  W  L  V  A  D  N  *  C  K  M  K  K  C  S  *  P  I  T  A  S  F  C  N  S  L  </first_frame>
            <second_frame>  R  Y  H  K  *  K  F  *  Q  A  F  F  V  A  N  K  *  C  P  H  S  N  T  P  Q  L  L  I  Y  F  L  R  R  S  F  Y  L  F  L  I  S  F  V  Y  S  E  M  R  T  S  M  L  K  S  I  V  R  R  S  S  T  A  G  A  S  Y  V  S  R  R  G  F  A  S  G  S  A  P  E  R  K  V  A  V  L  G  A  A  G  G  I  G  Q  P  L  S  L  L  M  K  L  N  P  L  V  S  S  L  S  L  Y  D  I  A  G  T  P  G  V  A  A  D  V  S  H  I  N  T  R  S  E  :  V  A  G  F  A  G  E  E  Q  L  G  Q  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  A  I  A  K  Y  C  P  N  :  A  L  V  N  M  I  S  N  P  V  N  S  T  V  P  I  A  A  E  V  F  K  K  A  G  T  Y  D  E  K  K  L  F  G  V  T  M  L  D  V  V  R  A  K  T  F  Y  A  G  K  A  K  V  N  V  A   : E  V  N  L  P  V  V  G  G  H  A  G  I  T  I  L  P  L  F  S  Q  :  A  T  P  K  A  N  L  S  D  E  E  I  V  A  L  T  K  R  T  Q  D  G  G  T  E  V  V  E  A  K  A  G  K  G  S  A  T  L  S  M  A :   Y  A  G  A  I  F  A  D  A  C  L  K  G  L  N  G  V  P  D  V  V  E  C  A  F  V  Q  S  N  V  T  E  L  P  F  F  A  S  K  :  V  R  L  G  K  N  G  V  E  E  V  L  G  L  G  P  L  N  D  Y  E  K  Q  G  L  E  A  L  K  P  E  L  L  S  S  I  E  K  G  I  K  F  A  K  E  N  *  K  N  K  I  M  V  *  F  S  I  V  T  V  L  D  L  F  G  S  I  V  F  V  S  F  A  S  F  L  Q  P  E  A  *  I  *  L  F  *  Y  Y  T  Q  H  F  Y  K  I  M  Y  G  K  L  G  A  Y  P  I  C  L  S  V  E  V  L  F  S  H  E  S  F  S  N  Y  G  *  *  Q  T  I  D  A  K  *  R  N  V  H  D  Q  L  L  H  R  F  A  I  H  * </second_frame>
            <third_frame>   V  I  T  N  E  S  F  D  R  L  F  L  L  P  I  N  S  A  H  T  V  T  H  H  N  S  *  F  I  F  S  A  V  A  F  T  F  S  S  F  L  L  Y  I  P  K  *  G  P  P  C  *  N  P  S  S  A  G  A  P  L  P  E  H  P  M  Y  L  A  V  D  S  H  R  D  P  R  R  R  G  K  L  Q  F  W  G  Q  P  E  G  L  D  S  L  Y  L  F  *  *  S  L  T  L  *  Y  P  A  F  H  S  T  I  S  P  V  L  P  V  L  P  P  M  L  V  T  S  T  P  D  L  R :   L  P  V  L  Q  E  K  S  S  *  G  R  H  W  K  E  L  M  L  L  S  F  L  L  V  C  P  E  S  L  V  *  P  E  M  I  C  S  T  L  M  R  V  L  L  N  L  Y  A  R  P  L  L  S  T  A  P  M :   L  W  S  I  *  *  A  T  Q  *  I  P  L  S  L  L  L  L  R  C  L  R  K  L  E  L  M  M  K  R  S  S  L  E  L  P  C  L  M  W  L  G  P  R  H  F  M  L  E  K  L  K  *  M  L  L  :  R  S  I  S  Q  *  L  V  V  M  L  A  *  L  S  S  H  Y  F  L  K :   P  L  Q  R  Q  I  Y  Q  M  R  K  L  L  H  S  Q  S  E  P  K  M  V  G  Q  K  L  *  R  P  R  L  E  R  V  Q  P  P  S  Q  W   : P  M  L  G  L  F  L  P  M  L  A  *  R  G  *  M  E  F  P  M  L  L  N  V  L  L  C  S  P  M  S  P  S  F  P  S  S  H  P  R :   *  D  L  G  K  M  E  W  R  K  S  *  G  W  V  H  L  T  T  T  R  S  K  D  L  R  L  L  S  Q  S  C  S  P  P  L  K  R  E  S  S  L  P  K  K  T  K  K  T  K  L  W  S  S  F  L  *  *  Q  F  W  I  F  L  G  Q  L  F  L  Y  P  L  Q  V  S  C  S  R  R  L  R  F  S  S  F  D  I  I  P  N  I  S  T  K  *  C  M  A  N  W  G  P  I  P  F  A  L  V  W  R  C  Y  S  H  M  N  R  F  P  I  M  V  S  S  R  Q  L  M  Q  N  E  E  M  F  M  T  N  Y  C  I  V  L  Q  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20927" stop="20586"/>
                    <exon start="20009" stop="19836"/>
                    <exon start="19726" stop="19558"/>
                    <exon start="19440" stop="19379"/>
                    <exon start="19195" stop="19074"/>
                    <exon start="18829" stop="18712"/>
                    <exon start="18230" stop="18090"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1125</number_coding_nucleotides>
                  <number_encoded_amino_acids>375</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPHSNTPQLLIYFLRRSFYLFLISFVYSEMRTSMLKSIVRRSSTAGASYVSRRGFASGSAPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVAGFAGEEQLGQALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTMLDVVRAKTFYAGKAKVNVAEVNLPVVGGHAGITILPLFSQATPKANLSDEEIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECAFVQSNVTELPFFASKVRLGKNGVEEVLGLGPLNDYEKQGLEALKPELLSSIEKGIKFAKEN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18120" stop="17908"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGNQVCQRKLKKQNYGLVFYSDSFGSFWVNCFCILCKFLAAGGLDLALLILYPTFLQNNVWQTGGLSHLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="20015" e_stop="19836"/>
            <exon e_start="19726" e_stop="19558"/>
            <exon e_start="19440" e_stop="19379"/>
            <exon e_start="19195" e_stop="19074"/>
            <exon e_start="18829" e_stop="18712"/>
            <exon e_start="18230" e_stop="17793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.718" acc_prob="0.960" e_score="0.989"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="20015" e_stop="19836" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.718" acc_prob="0.960">
            <gDNA_intron_boundary i_start="19835" i_stop="19727" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19726" e_stop="19558" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19440" e_stop="19379" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19195" e_stop="19074" e_length="122"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18829" e_stop="18712" e_length="118"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18230" e_stop="17793" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20015" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20009" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19991" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19950" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19931" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19929" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19927" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19903" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19902" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19862" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19844" stop="19836"/>
              <exon start="19726" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19712" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19698" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19697" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19690" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19661" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19654" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19617" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19605" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19591" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19573" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373527" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19428" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420411" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19173" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19166" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19108" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267881" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292054" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18824" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18809" stop="18712"/>
              <exon start="18230" stop="17932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18799" stop="18712"/>
              <exon start="18230" stop="17793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18798" stop="18712"/>
              <exon start="18230" stop="17811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18780" stop="18712"/>
              <exon start="18230" stop="17827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18776" stop="18712"/>
              <exon start="18230" stop="17824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18772" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217002" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18766" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220922" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18765" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18763" stop="18712"/>
              <exon start="18230" stop="17822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238662" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18757" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18752" stop="18712"/>
              <exon start="18230" stop="17812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18747" stop="18712"/>
              <exon start="18230" stop="17881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18166" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227414" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18103" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354625" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGCAGGTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAAT : GCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG : AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA : GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC : CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG : GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</gDNA_template>
            <first_frame> L  Q  V  A  G  F  A  G  E  E  Q  L  G  Q  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  A  I  A  K  Y  C  P  N  :  A  L  V  N  M  I  S  N  P  V  N  S  T  V  P  I  A  A  E  V  F  K  K  A  G  T  Y  D  E  K  K  L  F  G  V  T  M  L  D  V  V  R  A  K  T  F  Y  A  G  K  A  K  V  N  V  A   : E  V  N  L  P  V  V  G  G  H  A  G  I  T  I  L  P  L  F  S  Q  :  A  T  P  K  A  N  L  S  D  E  E  I  V  A  L  T  K  R  T  Q  D  G  G  T  E  V  V  E  A  K  A  G  K  G  S  A  T  L  S  M  A :   Y  A  G  A  I  F  A  D  A  C  L  K  G  L  N  G  V  P  D  V  V  E  C  A  F  V  Q  S  N  V  T  E  L  P  F  F  A  S  K  :  V  R  L  G  K  N  G  V  E  E  V  L  G  L  G  P  L  N  D  Y  E  K  Q  G  L  E  A  L  K  P  E  L  L  S  S  I  E  K  G  I  K  F  A  K  E  N  *  K  N  K  I  M  V  *  F  S  I  V  T  V  L  D  L  F  G  S  I  V  F  V  S  F  A  S  F  L  Q  P  E  A  *  I  *  L  F  *  Y  Y  T  Q  H  F  Y  K  I  M  Y  G  K  L  G  A  Y  P  I  C  L  S  V  E  V  L  F  S  H  E  S  F  S  N  Y  G  *  *  Q  T  I  D  A  K  *  R  N  V  H  D  Q  L  L  H  R  F  A  I  H  * </first_frame>
            <second_frame>  C  R  L  P  V  L  Q  E  K  S  S  *  G  R  H  W  K  E  L  M  L  L  S  F  L  L  V  C  P  E  S  L  V  *  P  E  M  I  C  S  T  L  M  R  V  L  L  N  L  Y  A  R  P  L  L  S  T  A  P  M :   L  W  S  I  *  *  A  T  Q  *  I  P  L  S  L  L  L  L  R  C  L  R  K  L  E  L  M  M  K  R  S  S  L  E  L  P  C  L  M  W  L  G  P  R  H  F  M  L  E  K  L  K  *  M  L  L  :  R  S  I  S  Q  *  L  V  V  M  L  A  *  L  S  S  H  Y  F  L  K :   P  L  Q  R  Q  I  Y  Q  M  R  K  L  L  H  S  Q  S  E  P  K  M  V  G  Q  K  L  *  R  P  R  L  E  R  V  Q  P  P  S  Q  W   : P  M  L  G  L  F  L  P  M  L  A  *  R  G  *  M  E  F  P  M  L  L  N  V  L  L  C  S  P  M  S  P  S  F  P  S  S  H  P  R :   *  D  L  G  K  M  E  W  R  K  S  *  G  W  V  H  L  T  T  T  R  S  K  D  L  R  L  L  S  Q  S  C  S  P  P  L  K  R  E  S  S  L  P  K  K  T  K  K  T  K  L  W  S  S  F  L  *  *  Q  F  W  I  F  L  G  Q  L  F  L  Y  P  L  Q  V  S  C  S  R  R  L  R  F  S  S  F  D  I  I  P  N  I  S  T  K  *  C  M  A  N  W  G  P  I  P  F  A  L  V  W  R  C  Y  S  H  M  N  R  F  P  I  M  V  S  S  R  Q  L  M  Q  N  E  E  M  F  M  T  N  Y  C  I  V  L  Q  F  I   </second_frame>
            <third_frame>   A  G  C  R  F  C  R  R  R  A  A  R  A  G  T  G  R  S  *  C  C  Y  H  S  C  W  C  A  P  K  A  W  Y  D  P  R  *  S  V  Q  H  *  C  G  Y  C  *  I  S  M  H  G  H  C  *  V  L  P  Q   : C  S  G  Q  Y  D  K  Q  P  S  E  F  H  C  P  Y  C  C  *  G  V  *  E  S  W  N  L  *  *  K  E  A  L  W  S  Y  H  A  *  C  G  *  G  Q  D  I  L  C  W  K  S  *  S  K  C  C  * :   G  Q  S  P  S  S  W  W  S  C  W  H  N  Y  P  P  I  I  F  S   : S  H  S  K  G  K  S  I  R  *  G  N  C  C  T  H  K  A  N  P  R  W  W  D  R  S  C  R  G  Q  G  W  K  G  F  S  H  P  L  N  G  :  L  C  W  G  Y  F  C  R  C  L  L  E  G  V  E  W  S  S  R  C  C  *  M  C  F  C  A  V  Q  C  H  R  A  S  L  L  R  I  Q   : G  K  T  W  E  K  W  S  G  G  S  P  R  V  G  S  T  *  R  L  R  E  A  R  T  *  G  S  *  A  R  A  A  L  L  H  *  K  G  N  Q  V  C  Q  R  K  L  K  K  Q  N  Y  G  L  V  F  Y  S  D  S  F  G  S  F  W  V  N  C  F  C  I  L  C  K  F  L  A  A  G  G  L  D  L  A  L  L  I  L  Y  P  T  F  L  Q  N  N  V  W  Q  T  G  G  L  S  H  L  P  *  C  G  G  V  I  L  T  *  I  V  F  Q  L  W  L  V  A  D  N  *  C  K  M  K  K  C  S  *  P  I  T  A  S  F  C  N  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20015" stop="19836"/>
                    <exon start="19726" stop="19558"/>
                    <exon start="19440" stop="19379"/>
                    <exon start="19195" stop="19074"/>
                    <exon start="18829" stop="18712"/>
                    <exon start="18230" stop="18090"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQVAGFAGEEQLGQALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTMLDVVRAKTFYAGKAKVNVAEVNLPVVGGHAGITILPLFSQATPKANLSDEEIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECAFVQSNVTELPFFASKVRLGKNGVEEVLGLGPLNDYEKQGLEALKPELLSSIEKGIKFAKEN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18120" stop="17908"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGNQVCQRKLKKQNYGLVFYSDSFGSFWVNCFCILCKFLAAGGLDLALLILYPTFLQNNVWQTGGLSHLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="20887" e_stop="20586"/>
            <exon e_start="20009" e_stop="19558"/>
            <exon e_start="19440" e_stop="19379"/>
            <exon e_start="19195" e_stop="19074"/>
            <exon e_start="18829" e_stop="18712"/>
            <exon e_start="18230" e_stop="17793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="0.996"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20887" e_stop="20586" e_length="302"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="20009" e_stop="19558" e_length="452"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19440" e_stop="19379" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19195" e_stop="19074" e_length="122"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18829" e_stop="18712" e_length="118"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18230" e_stop="17793" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20879" stop="20586"/>
              <exon start="20009" stop="19915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19558"/>
              <exon start="19440" stop="19380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20874" stop="20588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20863" stop="20586"/>
              <exon start="20009" stop="19880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444638" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20845" stop="20586"/>
              <exon start="20009" stop="19903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20839" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19712" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19698" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19697" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19690" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19661" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19654" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19641" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19617" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19605" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19591" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="18155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19573" stop="19558"/>
              <exon start="19440" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373527" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19428" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420411" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19173" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19166" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19108" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267881" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292054" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18824" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18809" stop="18712"/>
              <exon start="18230" stop="17932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18799" stop="18712"/>
              <exon start="18230" stop="17793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18798" stop="18712"/>
              <exon start="18230" stop="17811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18780" stop="18712"/>
              <exon start="18230" stop="17827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18776" stop="18712"/>
              <exon start="18230" stop="17824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18772" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217002" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18766" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220922" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18765" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18763" stop="18712"/>
              <exon start="18230" stop="17822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238662" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18757" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18752" stop="18712"/>
              <exon start="18230" stop="17812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18747" stop="18712"/>
              <exon start="18230" stop="17881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18166" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227414" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18103" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354625" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG : GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG : AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAA : GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC : CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG : GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</gDNA_template>
            <first_frame> S  A  V  A  F  T  F  S  S  F  L  L  Y  I  P  K  *  G  P  P  C  *  N  P  S  S  A  G  A  P  L  P  E  H  P  M  Y  L  A  V  D  S  H  R  D  P  R  R  R  G  K  L  Q  F  W  G  Q  P  E  G  L  D  S  L  Y  L  F  *  *  S  L  T  L  *  Y  P  A  F  H  S  T  I  S  P  V  L  P  V  L  P  P  M  L  V  T  S  T  P  D  L  R :   L  P  V  L  Q  E  K  S  S  *  G  R  H  W  K  E  L  M  L  L  S  F  L  L  V  C  P  E  S  L  V  *  P  E  M  I  C  S  T  L  M  R  V  L  L  N  L  Y  A  R  P  L  L  S  T  A  P  M  *  V  C  L  C  N  Y  L  C  I  W  G  L  Y  I  G  D  S  R  K  S  F  *  L  I  F  S  F  A  A  C  S  D  N  L  K  A  L  V  N  M  I  S  N  P  V  N  S  T  V  P  I  A  A  E  V  F  K  K  A  G  T  Y  D  E  K  K  L  F  G  V  T  M  L  D  V  V  R  A  K  T  F  Y  A  G  K  A  K  V  N  V  A   : E  V  N  L  P  V  V  G  G  H  A  G  I  T  I  L  P  L  F  S  Q  :  A  T  P  K  A  N  L  S  D  E  E  I  V  A  L  T  K  R  T  Q  D  G  G  T  E  V  V  E  A  K  A  G  K  G  S  A  T  L  S  M  A :   Y  A  G  A  I  F  A  D  A  C  L  K  G  L  N  G  V  P  D  V  V  E  C  A  F  V  Q  S  N  V  T  E  L  P  F  F  A  S  K  :  V  R  L  G  K  N  G  V  E  E  V  L  G  L  G  P  L  N  D  Y  E  K  Q  G  L  E  A  L  K  P  E  L  L  S  S  I  E  K  G  I  K  F  A  K  E  N  *  K  N  K  I  M  V  *  F  S  I  V  T  V  L  D  L  F  G  S  I  V  F  V  S  F  A  S  F  L  Q  P  E  A  *  I  *  L  F  *  Y  Y  T  Q  H  F  Y  K  I  M  Y  G  K  L  G  A  Y  P  I  C  L  S  V  E  V  L  F  S  H  E  S  F  S  N  Y  G  *  *  Q  T  I  D  A  K  *  R  N  V  H  D  Q  L  L  H  R  F  A  I  H  * </first_frame>
            <second_frame>  P  P  *  L  L  P  F  P  H  F  F  C  I  F  R  N  E  D  L  H  V  E  I  H  R  P  P  E  L  H  C  R  S  I  L  C  I  S  P  W  I  R  I  G  I  R  A  G  E  E  S  C  S  F  G  G  S  R  R  D  W  T  A  F  I  S  S  N  E  A  *  P  F  S  I  Q  P  F  T  L  R  Y  R  R  Y  S  R  C  C  R  R  C  *  S  H  Q  H  Q  I  *   : G  C  R  F  C  R  R  R  A  A  R  A  G  T  G  R  S  *  C  C  Y  H  S  C  W  C  A  P  K  A  W  Y  D  P  R  *  S  V  Q  H  *  C  G  Y  C  *  I  S  M  H  G  H  C  *  V  L  P  Q  C  E  Y  A  C  V  I  I  S  V  Y  G  G  Y  I  *  E  I  L  E  K  V  S  D  *  F  S  H  L  L  L  V  L  I  T  *  R  L  W  S  I  *  *  A  T  Q  *  I  P  L  S  L  L  L  L  R  C  L  R  K  L  E  L  M  M  K  R  S  S  L  E  L  P  C  L  M  W  L  G  P  R  H  F  M  L  E  K  L  K  *  M  L  L  :  R  S  I  S  Q  *  L  V  V  M  L  A  *  L  S  S  H  Y  F  L  K :   P  L  Q  R  Q  I  Y  Q  M  R  K  L  L  H  S  Q  S  E  P  K  M  V  G  Q  K  L  *  R  P  R  L  E  R  V  Q  P  P  S  Q  W   : P  M  L  G  L  F  L  P  M  L  A  *  R  G  *  M  E  F  P  M  L  L  N  V  L  L  C  S  P  M  S  P  S  F  P  S  S  H  P  R :   *  D  L  G  K  M  E  W  R  K  S  *  G  W  V  H  L  T  T  T  R  S  K  D  L  R  L  L  S  Q  S  C  S  P  P  L  K  R  E  S  S  L  P  K  K  T  K  K  T  K  L  W  S  S  F  L  *  *  Q  F  W  I  F  L  G  Q  L  F  L  Y  P  L  Q  V  S  C  S  R  R  L  R  F  S  S  F  D  I  I  P  N  I  S  T  K  *  C  M  A  N  W  G  P  I  P  F  A  L  V  W  R  C  Y  S  H  M  N  R  F  P  I  M  V  S  S  R  Q  L  M  Q  N  E  E  M  F  M  T  N  Y  C  I  V  L  Q  F  I   </second_frame>
            <third_frame>   R  R  S  F  Y  L  F  L  I  S  F  V  Y  S  E  M  R  T  S  M  L  K  S  I  V  R  R  S  S  T  A  G  A  S  Y  V  S  R  R  G  F  A  S  G  S  A  P  E  R  K  V  A  V  L  G  A  A  G  G  I  G  Q  P  L  S  L  L  M  K  L  N  P  L  V  S  S  L  S  L  Y  D  I  A  G  T  P  G  V  A  A  D  V  S  H  I  N  T  R  S  E  :  V  A  G  F  A  G  E  E  Q  L  G  Q  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  A  I  A  K  Y  C  P  N  V  S  M  L  V  *  L  S  L  Y  M  G  V  I  Y  R  R  F  *  K  K  F  L  I  N  F  L  I  C  C  L  F  *  *  L  K  G  S  G  Q  Y  D  K  Q  P  S  E  F  H  C  P  Y  C  C  *  G  V  *  E  S  W  N  L  *  *  K  E  A  L  W  S  Y  H  A  *  C  G  *  G  Q  D  I  L  C  W  K  S  *  S  K  C  C  * :   G  Q  S  P  S  S  W  W  S  C  W  H  N  Y  P  P  I  I  F  S   : S  H  S  K  G  K  S  I  R  *  G  N  C  C  T  H  K  A  N  P  R  W  W  D  R  S  C  R  G  Q  G  W  K  G  F  S  H  P  L  N  G  :  L  C  W  G  Y  F  C  R  C  L  L  E  G  V  E  W  S  S  R  C  C  *  M  C  F  C  A  V  Q  C  H  R  A  S  L  L  R  I  Q   : G  K  T  W  E  K  W  S  G  G  S  P  R  V  G  S  T  *  R  L  R  E  A  R  T  *  G  S  *  A  R  A  A  L  L  H  *  K  G  N  Q  V  C  Q  R  K  L  K  K  Q  N  Y  G  L  V  F  Y  S  D  S  F  G  S  F  W  V  N  C  F  C  I  L  C  K  F  L  A  A  G  G  L  D  L  A  L  L  I  L  Y  P  T  F  L  Q  N  N  V  W  Q  T  G  G  L  S  H  L  P  *  C  G  G  V  I  L  T  *  I  V  F  Q  L  W  L  V  A  D  N  *  C  K  M  K  K  C  S  *  P  I  T  A  S  F  C  N  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19765" stop="19558"/>
                    <exon start="19440" stop="19379"/>
                    <exon start="19195" stop="19074"/>
                    <exon start="18829" stop="18712"/>
                    <exon start="18230" stop="18090"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIFSFAACSDNLKALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTMLDVVRAKTFYAGKAKVNVAEVNLPVVGGHAGITILPLFSQATPKANLSDEEIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECAFVQSNVTELPFFASKVRLGKNGVEEVLGLGPLNDYEKQGLEALKPELLSSIEKGIKFAKEN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20885" stop="20586"/>
                    <exon start="20009" stop="19818"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRSFYLFLISFVYSEMRTSMLKSIVRRSSTAGASYVSRRGFASGSAPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVAGFAGEEQLGQALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNVSMLV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18120" stop="17908"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGNQVCQRKLKKQNYGLVFYSDSFGSFWVNCFCILCKFLAAGGLDLALLILYPTFLQNNVWQTGGLSHLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="20879" e_stop="20586"/>
            <exon e_start="20009" e_stop="19860"/>
            <exon e_start="19394" e_stop="19379"/>
            <exon e_start="19195" e_stop="19074"/>
            <exon e_start="18829" e_stop="18712"/>
            <exon e_start="18230" e_stop="17793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.938"/>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20879" e_stop="20586" e_length="294"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20009" e_stop="19860" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.970" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19859" i_stop="19395" i_length="465"/>
          </intron>
          <exon e_serial="3" e_score="0.938">
            <gDNA_exon_boundary e_start="19394" e_stop="19379" e_length="16"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19378" i_stop="19196" i_length="183"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19195" e_stop="19074" e_length="122"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="19073" i_stop="18830" i_length="244"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18829" e_stop="18712" e_length="118"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18711" i_stop="18231" i_length="481"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18230" e_stop="17793" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20879" stop="20586"/>
              <exon start="20009" stop="19915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20874" stop="20588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20863" stop="20586"/>
              <exon start="20009" stop="19880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444638" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20845" stop="20586"/>
              <exon start="20009" stop="19903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20839" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19928" stop="19860"/>
              <exon start="19394" stop="19379"/>
              <exon start="19195" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19173" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19166" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19108" stop="19074"/>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267881" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18829" stop="18712"/>
              <exon start="18230" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292054" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18824" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18809" stop="18712"/>
              <exon start="18230" stop="17932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18799" stop="18712"/>
              <exon start="18230" stop="17793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18798" stop="18712"/>
              <exon start="18230" stop="17811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18780" stop="18712"/>
              <exon start="18230" stop="17827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230679" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18776" stop="18712"/>
              <exon start="18230" stop="17824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18772" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217002" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18766" stop="18712"/>
              <exon start="18230" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220922" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18765" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18763" stop="18712"/>
              <exon start="18230" stop="17822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238662" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18760" stop="18712"/>
              <exon start="18230" stop="17813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18757" stop="18712"/>
              <exon start="18230" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18752" stop="18712"/>
              <exon start="18230" stop="17812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18747" stop="18712"/>
              <exon start="18230" stop="17881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18212" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18206" stop="17821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18196" stop="17809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18166" stop="17901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227414" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18103" stop="17884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354625" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG : GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACG : CCCATTATTTTCTCAA : GCCACTCCAAAGGCAAATCTATCAGATGAGGAAATTGTTGCACTCACAAAGCGAACCCAAGATGGTGGGACAGAAGTTGTAGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCAATGGC : CTATGCTGGGGCTATTTTTGCCGATGCTTGCTTGAAGGGGTTGAATGGAGTTCCCGATGTTGTTGAATGTGCTTTTGTGCAGTCCAATGTCACCGAGCTTCCCTTCTTCGCATCCAAG : GTAAGACTTGGGAAAAATGGAGTGGAGGAAGTCCTAGGGTTGGGTCCACTTAACGACTACGAGAAGCAAGGACTTGAGGCTCTTAAGCCAGAGCTGCTCTCCTCCATTGAAAAGGGAATCAAGTTTGCCAAAGAAAACTAAAAAAACAAAATTATGGTCTAGTTTTCTATAGTGACAGTTTTGGATCTTTTTGGGTCAATTGTTTTTGTATCCTTTGCAAGTTTCTTGCAGCCGGAGGCTTAGATTTAGCTCTTTTGATATTATACCCAACATTTCTACAAAATAATGTATGGCAAACTGGGGGCCTATCCCATTTGCCTTAGTGTGGAGGTGTTATTCTCACATGAATCGTTTTCCAATTATGGTTAGTAGCAGACAATTGATGCAAAATGAAGAAATGTTCATGACCAATTACTGCATCGTTTTGCAATTCATTAA</gDNA_template>
            <first_frame> S  F  Y  L  F  L  I  S  F  V  Y  S  E  M  R  T  S  M  L  K  S  I  V  R  R  S  S  T  A  G  A  S  Y  V  S  R  R  G  F  A  S  G  S  A  P  E  R  K  V  A  V  L  G  A  A  G  G  I  G  Q  P  L  S  L  L  M  K  L  N  P  L  V  S  S  L  S  L  Y  D  I  A  G  T  P  G  V  A  A  D  V  S  H  I  N  T  R  S  E  :  V  A  G  F  A  G  E  E  Q  L  G  Q  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  :  P  I  I  F  S   : S  H  S  K  G  K  S  I  R  *  G  N  C  C  T  H  K  A  N  P  R  W  W  D  R  S  C  R  G  Q  G  W  K  G  F  S  H  P  L  N  G  :  L  C  W  G  Y  F  C  R  C  L  L  E  G  V  E  W  S  S  R  C  C  *  M  C  F  C  A  V  Q  C  H  R  A  S  L  L  R  I  Q   : G  K  T  W  E  K  W  S  G  G  S  P  R  V  G  S  T  *  R  L  R  E  A  R  T  *  G  S  *  A  R  A  A  L  L  H  *  K  G  N  Q  V  C  Q  R  K  L  K  K  Q  N  Y  G  L  V  F  Y  S  D  S  F  G  S  F  W  V  N  C  F  C  I  L  C  K  F  L  A  A  G  G  L  D  L  A  L  L  I  L  Y  P  T  F  L  Q  N  N  V  W  Q  T  G  G  L  S  H  L  P  *  C  G  G  V  I  L  T  *  I  V  F  Q  L  W  L  V  A  D  N  *  C  K  M  K  K  C  S  *  P  I  T  A  S  F  C  N  S  L  </first_frame>
            <second_frame>  A  F  T  F  S  S  F  L  L  Y  I  P  K  *  G  P  P  C  *  N  P  S  S  A  G  A  P  L  P  E  H  P  M  Y  L  A  V  D  S  H  R  D  P  R  R  R  G  K  L  Q  F  W  G  Q  P  E  G  L  D  S  L  Y  L  F  *  *  S  L  T  L  *  Y  P  A  F  H  S  T  I  S  P  V  L  P  V  L  P  P  M  L  V  T  S  T  P  D  L  R :   L  P  V  L  Q  E  K  S  S  *  G  R  H  W  K  E  L  M  L  L  S  F  L  L  V  C  P  E  S  L  V  *  P  E  M  I  C  S  T  L  M  R  V  L  L  N  L  Y  A  R :   P  L  F  S  Q  :  A  T  P  K  A  N  L  S  D  E  E  I  V  A  L  T  K  R  T  Q  D  G  G  T  E  V  V  E  A  K  A  G  K  G  S  A  T  L  S  M  A :   Y  A  G  A  I  F  A  D  A  C  L  K  G  L  N  G  V  P  D  V  V  E  C  A  F  V  Q  S  N  V  T  E  L  P  F  F  A  S  K  :  V  R  L  G  K  N  G  V  E  E  V  L  G  L  G  P  L  N  D  Y  E  K  Q  G  L  E  A  L  K  P  E  L  L  S  S  I  E  K  G  I  K  F  A  K  E  N  *  K  N  K  I  M  V  *  F  S  I  V  T  V  L  D  L  F  G  S  I  V  F  V  S  F  A  S  F  L  Q  P  E  A  *  I  *  L  F  *  Y  Y  T  Q  H  F  Y  K  I  M  Y  G  K  L  G  A  Y  P  I  C  L  S  V  E  V  L  F  S  H  E  S  F  S  N  Y  G  *  *  Q  T  I  D  A  K  *  R  N  V  H  D  Q  L  L  H  R  F  A  I  H  * </second_frame>
            <third_frame>   L  L  P  F  P  H  F  F  C  I  F  R  N  E  D  L  H  V  E  I  H  R  P  P  E  L  H  C  R  S  I  L  C  I  S  P  W  I  R  I  G  I  R  A  G  E  E  S  C  S  F  G  G  S  R  R  D  W  T  A  F  I  S  S  N  E  A  *  P  F  S  I  Q  P  F  T  L  R  Y  R  R  Y  S  R  C  C  R  R  C  *  S  H  Q  H  Q  I  *   : G  C  R  F  C  R  R  R  A  A  R  A  G  T  G  R  S  *  C  C  Y  H  S  C  W  C  A  P  K  A  W  Y  D  P  R  *  S  V  Q  H  *  C  G  Y  C  *  I  S  M  H   : A  H  Y  F  L  K :   P  L  Q  R  Q  I  Y  Q  M  R  K  L  L  H  S  Q  S  E  P  K  M  V  G  Q  K  L  *  R  P  R  L  E  R  V  Q  P  P  S  Q  W   : P  M  L  G  L  F  L  P  M  L  A  *  R  G  *  M  E  F  P  M  L  L  N  V  L  L  C  S  P  M  S  P  S  F  P  S  S  H  P  R :   *  D  L  G  K  M  E  W  R  K  S  *  G  W  V  H  L  T  T  T  R  S  K  D  L  R  L  L  S  Q  S  C  S  P  P  L  K  R  E  S  S  L  P  K  K  T  K  K  T  K  L  W  S  S  F  L  *  *  Q  F  W  I  F  L  G  Q  L  F  L  Y  P  L  Q  V  S  C  S  R  R  L  R  F  S  S  F  D  I  I  P  N  I  S  T  K  *  C  M  A  N  W  G  P  I  P  F  A  L  V  W  R  C  Y  S  H  M  N  R  F  P  I  M  V  S  S  R  Q  L  M  Q  N  E  E  M  F  M  T  N  Y  C  I  V  L  Q  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20879" stop="20586"/>
                    <exon start="20009" stop="19860"/>
                    <exon start="19394" stop="19379"/>
                    <exon start="19195" stop="19167"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>486</number_coding_nucleotides>
                  <number_encoded_amino_acids>162</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFYLFLISFVYSEMRTSMLKSIVRRSSTAGASYVSRRGFASGSAPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVAGFAGEEQLGQALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTPIIFSSHSKGKSIR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19912" stop="19860"/>
                    <exon start="19394" stop="19379"/>
                    <exon start="19195" stop="19074"/>
                    <exon start="18829" stop="18712"/>
                    <exon start="18230" stop="18090"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PEMICSTLMRVLLNLYARPLFSQATPKANLSDEEIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECAFVQSNVTELPFFASKVRLGKNGVEEVLGLGPLNDYEKQGLEALKPELLSSIEKGIKFAKEN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18120" stop="17908"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGNQVCQRKLKKQNYGLVFYSDSFGSFWVNCFCILCKFLAAGGLDLALLILYPTFLQNNVWQTGGLSHLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="20887" e_stop="20586"/>
            <exon e_start="20009" e_stop="19558"/>
            <exon e_start="19440" e_stop="19314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20887" e_stop="20586" e_length="302"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20585" i_stop="20010" i_length="576"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20009" e_stop="19558" e_length="452"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19557" i_stop="19441" i_length="117"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="19440" e_stop="19314" e_length="127"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20887" stop="20586"/>
              <exon start="20009" stop="19854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20879" stop="20586"/>
              <exon start="20009" stop="19915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20878" stop="20586"/>
              <exon start="20009" stop="19860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19558"/>
              <exon start="19440" stop="19314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20877" stop="20586"/>
              <exon start="20009" stop="19558"/>
              <exon start="19440" stop="19380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20874" stop="20588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20870" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20863" stop="20586"/>
              <exon start="20009" stop="19880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20857" stop="20586"/>
              <exon start="20009" stop="19864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444638" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20845" stop="20586"/>
              <exon start="20009" stop="19903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20839" stop="20586"/>
              <exon start="20009" stop="19887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269866" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCGCCGTAGCTTTTACCTTTTCCTCATTTCTTTTGTATATTCCGAAATGAGGACCTCCATGTTGAAATCCATCGTCCGCCGGAGCTCCACTGCCGGAGCATCCTATGTATCTCGCCGTGGATTCGCATCGGGATCCGCGCCGGAGAGGAAAGTTGCAGTTTTGGGGGCAGCCGGAGGGATTGGACAGCCTTTATCTCTTCTAATGAAGCTTAACCCTTTAGTATCCAGCCTTTCACTCTACGATATCGCCGGTACTCCCGGTGTTGCCGCCGATGTTAGTCACATCAACACCAGATCTGAG : GTTGCCGGTTTTGCAGGAGAAGAGCAGCTAGGGCAGGCACTGGAAGGAGCTGATGTTGTTATCATTCCTGCTGGTGTGCCCCGAAAGCCTGGTATGACCCGAGATGATCTGTTCAACATTAATGCGGGTATTGTTAAATCTCTATGCACGGCCATTGCTAAGTACTGCCCCAATGTGAGTATGCTTGTGTAATTATCTCTGTATATGGGGGTTATATATAGGAGATTCTAGAAAAAGTTTCTGATTAATTTTCTCATTTGCTGCTTGTTCTGATAACTTAAAGGCTCTGGTCAATATGATAAGCAACCCAGTGAATTCCACTGTCCCTATTGCTGCTGAGGTGTTTAAGAAAGCTGGAACTTATGATGAAAAGAAGCTCTTTGGAGTTACCATGCTTGATGTGGTTAGGGCCAAGACATTTTATGCTGGAAAAGCTAAAGTAAATGTTGCTG : AGGTCAATCTCCCAGTAGTTGGTGGTCATGCTGGCATAACTATCCTCCCATTATTTTCTCAAGTAATTTTTCTTTTCTTGTCCCTTGTTATAAAGCTTTTTCTTTTTTTAGTATCTATTATTATCTT</gDNA_template>
            <first_frame> S  A  V  A  F  T  F  S  S  F  L  L  Y  I  P  K  *  G  P  P  C  *  N  P  S  S  A  G  A  P  L  P  E  H  P  M  Y  L  A  V  D  S  H  R  D  P  R  R  R  G  K  L  Q  F  W  G  Q  P  E  G  L  D  S  L  Y  L  F  *  *  S  L  T  L  *  Y  P  A  F  H  S  T  I  S  P  V  L  P  V  L  P  P  M  L  V  T  S  T  P  D  L  R :   L  P  V  L  Q  E  K  S  S  *  G  R  H  W  K  E  L  M  L  L  S  F  L  L  V  C  P  E  S  L  V  *  P  E  M  I  C  S  T  L  M  R  V  L  L  N  L  Y  A  R  P  L  L  S  T  A  P  M  *  V  C  L  C  N  Y  L  C  I  W  G  L  Y  I  G  D  S  R  K  S  F  *  L  I  F  S  F  A  A  C  S  D  N  L  K  A  L  V  N  M  I  S  N  P  V  N  S  T  V  P  I  A  A  E  V  F  K  K  A  G  T  Y  D  E  K  K  L  F  G  V  T  M  L  D  V  V  R  A  K  T  F  Y  A  G  K  A  K  V  N  V  A   : E  V  N  L  P  V  V  G  G  H  A  G  I  T  I  L  P  L  F  S  Q  V  I  F  L  F  L  S  L  V  I  K  L  F  L  F  L  V  S  I  I  I   </first_frame>
            <second_frame>  P  P  *  L  L  P  F  P  H  F  F  C  I  F  R  N  E  D  L  H  V  E  I  H  R  P  P  E  L  H  C  R  S  I  L  C  I  S  P  W  I  R  I  G  I  R  A  G  E  E  S  C  S  F  G  G  S  R  R  D  W  T  A  F  I  S  S  N  E  A  *  P  F  S  I  Q  P  F  T  L  R  Y  R  R  Y  S  R  C  C  R  R  C  *  S  H  Q  H  Q  I  *   : G  C  R  F  C  R  R  R  A  A  R  A  G  T  G  R  S  *  C  C  Y  H  S  C  W  C  A  P  K  A  W  Y  D  P  R  *  S  V  Q  H  *  C  G  Y  C  *  I  S  M  H  G  H  C  *  V  L  P  Q  C  E  Y  A  C  V  I  I  S  V  Y  G  G  Y  I  *  E  I  L  E  K  V  S  D  *  F  S  H  L  L  L  V  L  I  T  *  R  L  W  S  I  *  *  A  T  Q  *  I  P  L  S  L  L  L  L  R  C  L  R  K  L  E  L  M  M  K  R  S  S  L  E  L  P  C  L  M  W  L  G  P  R  H  F  M  L  E  K  L  K  *  M  L  L  :  R  S  I  S  Q  *  L  V  V  M  L  A  *  L  S  S  H  Y  F  L  K  *  F  F  F  S  C  P  L  L  *  S  F  F  F  F  *  Y  L  L  L  S  </second_frame>
            <third_frame>   R  R  S  F  Y  L  F  L  I  S  F  V  Y  S  E  M  R  T  S  M  L  K  S  I  V  R  R  S  S  T  A  G  A  S  Y  V  S  R  R  G  F  A  S  G  S  A  P  E  R  K  V  A  V  L  G  A  A  G  G  I  G  Q  P  L  S  L  L  M  K  L  N  P  L  V  S  S  L  S  L  Y  D  I  A  G  T  P  G  V  A  A  D  V  S  H  I  N  T  R  S  E  :  V  A  G  F  A  G  E  E  Q  L  G  Q  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  A  I  A  K  Y  C  P  N  V  S  M  L  V  *  L  S  L  Y  M  G  V  I  Y  R  R  F  *  K  K  F  L  I  N  F  L  I  C  C  L  F  *  *  L  K  G  S  G  Q  Y  D  K  Q  P  S  E  F  H  C  P  Y  C  C  *  G  V  *  E  S  W  N  L  *  *  K  E  A  L  W  S  Y  H  A  *  C  G  *  G  Q  D  I  L  C  W  K  S  *  S  K  C  C  * :   G  Q  S  P  S  S  W  W  S  C  W  H  N  Y  P  P  I  I  F  S  S  N  F  S  F  L  V  P  C  Y  K  A  F  S  F  F  S  I  Y  Y  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20885" stop="20586"/>
                    <exon start="20009" stop="19818"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRSFYLFLISFVYSEMRTSMLKSIVRRSSTAGASYVSRRGFASGSAPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVAGFAGEEQLGQALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNVSMLV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19765" stop="19558"/>
                    <exon start="19440" stop="19316"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIFSFAACSDNLKALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTMLDVVRAKTFYAGKAKVNVAEVNLPVVGGHAGITILPLFSQVIFLFLSLVIKLFLFLVSIII</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="17822" PGL_stop="18232"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17822" e_stop="18232"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="17822" e_stop="18232" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17822" stop="18232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17827" stop="18218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230609" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTCATGAACATTTCTTCATTTTGCATCAATTGTCTGCTACTAACCATAATTGGAAAACGATTCATGTGAGAATAACACCTCCACACTAAGGCAAATGGGATAGGCCCCCAGTTTGCCATACATTATTTTGTAGAAATGTTGGGTATAATATCAAAAGAGCTAAATCTAAGCCTCCGGCTGCAAGAAACTTGCAAAGGATACAAAAACAATTGACCCAAAAAGATCCAAAACTGTCACTATAGAAAACTAGACCATAATTTTGTTTTTTTAGTTTTCTTTGGCAAACTTGATTCCCTTTTCAATGGAGGAGAGCAGCTCTGGCTTAAGAGCCTCAAGTCCTTGCTTCTCGTAGTCGTTAAGTGGACCCAACCCTAGGACTTCCTCCACTCCATTTTTCCCAAGTCTTACCT</gDNA_template>
            <first_frame> G  H  E  H  F  F  I  L  H  Q  L  S  A  T  N  H  N  W  K  T  I  H  V  R  I  T  P  P  H  *  G  K  W  D  R  P  P  V  C  H  T  L  F  C  R  N  V  G  Y  N  I  K  R  A  K  S  K  P  P  A  A  R  N  L  Q  R  I  Q  K  Q  L  T  Q  K  D  P  K  L  S  L  *  K  T  R  P  *  F  C  F  F  S  F  L  W  Q  T  *  F  P  F  Q  W  R  R  A  A  L  A  *  E  P  Q  V  L  A  S  R  S  R  *  V  D  P  T  L  G  L  P  P  L  H  F  S  Q  V  L  P </first_frame>
            <second_frame>  V  M  N  I  S  S  F  C  I  N  C  L  L  L  T  I  I  G  K  R  F  M  *  E  *  H  L  H  T  K  A  N  G  I  G  P  Q  F  A  I  H  Y  F  V  E  M  L  G  I  I  S  K  E  L  N  L  S  L  R  L  Q  E  T  C  K  G  Y  K  N  N  *  P  K  K  I  Q  N  C  H  Y  R  K  L  D  H  N  F  V  F  L  V  F  F  G  K  L  D  S  L  F  N  G  G  E  Q  L  W  L  K  S  L  K  S  L  L  L  V  V  V  K  W  T  Q  P  *  D  F  L  H  S  I  F  P  K  S  Y   </second_frame>
            <third_frame>   S  *  T  F  L  H  F  A  S  I  V  C  Y  *  P  *  L  E  N  D  S  C  E  N  N  T  S  T  L  R  Q  M  G  *  A  P  S  L  P  Y  I  I  L  *  K  C  W  V  *  Y  Q  K  S  *  I  *  A  S  G  C  K  K  L  A  K  D  T  K  T  I  D  P  K  R  S  K  T  V  T  I  E  N  *  T  I  I  L  F  F  *  F  S  L  A  N  L  I  P  F  S  M  E  E  S  S  S  G  L  R  A  S  S  P  C  F  S  *  S  L  S  G  P  N  P  R  T  S  S  T  P  F  F  P  S  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0308M01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="20990" PGL_stop="21908"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20990" e_stop="21061"/>
            <exon e_start="21172" e_stop="21230"/>
            <exon e_start="21338" e_stop="21908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.917"/>
          <exon-intron don_prob="0.826" acc_prob="0.580" e_score="0.915"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="20990" e_stop="21061" e_length="72"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21062" i_stop="21171" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.915">
            <gDNA_exon_boundary e_start="21172" e_stop="21230" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.826" acc_prob="0.580">
            <gDNA_intron_boundary i_start="21231" i_stop="21337" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="0.912">
            <gDNA_exon_boundary e_start="21338" e_stop="21908" e_length="571"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20990" stop="21061"/>
              <exon start="21172" stop="21230"/>
              <exon start="21338" stop="21908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTCTTTTATCATATTAGATCTCGATTAAATTTGAAACTTTTTTATTGAATAGTAGACTCTTGAATTCAAA : CATGTGATTAAAGACGATTGTTCGTATGTCCAGGGGATGAATCTTGTTTGAAACAAATG : ATGATATAAATTTATCAAACATGCAACAAGAAATTCTTCGTGATCATGCATAATTATTTTCAAGAATGTGACTAAATACGATTGTTCGTATGTCTGGGAGATGAATCTTGTCTGAAATAGATAGTATGAATTTATCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTGTCAAGCATGTGATTAAAGACGATTGTTCATATATTCAGGGGATGAATGTTTTTTTTTTGAAATAGATGGTATGAATTTGTCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGGATGTGACTAAAGACGATTGTTCGTATGTATGGGGAATAAATCTTGTCTGAAATAGATGGTATGAATTTATCAAATATTCAGCAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGATTAAAGACGATTGTTCATATATTCAGGGGATGAATCTTTTTTTTGAAATAGATGGTATGAATTTGTCAAATATTCAACAAGAAATTCTTCGTGATCATACATAATTATTTTCAAGCATGTGATTAAAGACGGTTGT</gDNA_template>
            <first_frame> I  S  F  I  I  L  D  L  D  *  I  *  N  F  F  I  E  *  *  T  L  E  F  K  :  H  V  I  K  D  D  C  S  Y  V  Q  G  M  N  L  V  *  N  K  * :   *  Y  K  F  I  K  H  A  T  R  N  S  S  *  S  C  I  I  I  F  K  N  V  T  K  Y  D  C  S  Y  V  W  E  M  N  L  V  *  N  R  *  Y  E  F  I  K  Y  S  T  R  N  S  S  *  S  Y  I  I  I  V  K  H  V  I  K  D  D  C  S  Y  I  Q  G  M  N  V  F  F  L  K  *  M  V  *  I  C  Q  I  F  N  K  K  F  F  V  I  I  H  N  Y  F  Q  G  C  D  *  R  R  L  F  V  C  M  G  N  K  S  C  L  K  *  M  V  *  I  Y  Q  I  F  S  K  K  F  F  V  I  I  H  N  Y  F  Q  A  C  D  *  R  R  L  F  I  Y  S  G  D  E  S  F  F  *  N  R  W  Y  E  F  V  K  Y  S  T  R  N  S  S  *  S  Y  I  I  I  F  K  H  V  I  K  D  G  C </first_frame>
            <second_frame>  F  L  L  S  Y  *  I  S  I  K  F  E  T  F  L  L  N  S  R  L  L  N  S  N :   M  *  L  K  T  I  V  R  M  S  R  G  *  I  L  F  E  T  N   : D  D  I  N  L  S  N  M  Q  Q  E  I  L  R  D  H  A  *  L  F  S  R  M  *  L  N  T  I  V  R  M  S  G  R  *  I  L  S  E  I  D  S  M  N  L  S  N  I  Q  Q  E  I  L  R  D  H  T  *  L  L  S  S  M  *  L  K  T  I  V  H  I  F  R  G  *  M  F  F  F  *  N  R  W  Y  E  F  V  K  Y  S  T  R  N  S  S  *  S  Y  I  I  I  F  K  D  V  T  K  D  D  C  S  Y  V  W  G  I  N  L  V  *  N  R  W  Y  E  F  I  K  Y  S  A  R  N  S  S  *  S  Y  I  I  I  F  K  H  V  I  K  D  D  C  S  Y  I  Q  G  M  N  L  F  F  E  I  D  G  M  N  L  S  N  I  Q  Q  E  I  L  R  D  H  T  *  L  F  S  S  M  *  L  K  T  V   </second_frame>
            <third_frame>   F  F  Y  H  I  R  S  R  L  N  L  K  L  F  Y  *  I  V  D  S  *  I  Q   : T  C  D  *  R  R  L  F  V  C  P  G  D  E  S  C  L  K  Q  M  :  M  I  *  I  Y  Q  T  C  N  K  K  F  F  V  I  M  H  N  Y  F  Q  E  C  D  *  I  R  L  F  V  C  L  G  D  E  S  C  L  K  *  I  V  *  I  Y  Q  I  F  N  K  K  F  F  V  I  I  H  N  Y  C  Q  A  C  D  *  R  R  L  F  I  Y  S  G  D  E  C  F  F  F  E  I  D  G  M  N  L  S  N  I  Q  Q  E  I  L  R  D  H  T  *  L  F  S  R  M  *  L  K  T  I  V  R  M  Y  G  E  *  I  L  S  E  I  D  G  M  N  L  S  N  I  Q  Q  E  I  L  R  D  H  T  *  L  F  S  S  M  *  L  K  T  I  V  H  I  F  R  G  *  I  F  F  L  K  *  M  V  *  I  C  Q  I  F  N  K  K  F  F  V  I  I  H  N  Y  F  Q  A  C  D  *  R  R  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0308M01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="28056" PGL_stop="22527"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28056" e_stop="27916"/>
            <exon e_start="26328" e_stop="26141"/>
            <exon e_start="25960" e_stop="24562"/>
            <exon e_start="24426" e_stop="24322"/>
            <exon e_start="23300" e_stop="23152"/>
            <exon e_start="23070" e_stop="22527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.257" acc_prob="0.997" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.974" e_score="0.998"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="28056" e_stop="27916" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.257" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27915" i_stop="26329" i_length="1587"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26328" e_stop="26141" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.983">
            <gDNA_intron_boundary i_start="26140" i_stop="25961" i_length="180"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="25960" e_stop="24562" e_length="1399"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.974">
            <gDNA_intron_boundary i_start="24561" i_stop="24427" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24426" e_stop="24322" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24321" i_stop="23301" i_length="1021"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23300" e_stop="23152" e_length="149"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.979">
            <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="23070" e_stop="22527" e_length="544"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28056" stop="27916"/>
              <exon start="26328" stop="26141"/>
              <exon start="25960" stop="24562"/>
              <exon start="24426" stop="24322"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745776" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27993" stop="27916"/>
              <exon start="26328" stop="26141"/>
              <exon start="25960" stop="25485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27992" stop="27916"/>
              <exon start="26328" stop="26141"/>
              <exon start="25960" stop="25613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26328" stop="26141"/>
              <exon start="25960" stop="25674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25906" stop="25426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25296" stop="24609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24695" stop="24562"/>
              <exon start="24426" stop="24322"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544555" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23010" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22990" stop="22698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22979" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22963" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226863" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22934" stop="22527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353555" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22899" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219942" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACTGTGCTTGTCACCATTAATAATATTTTTTCTCTTTTTATATGTATATGCATCTCCTTCATCTTTTTAGCTCAGTGCTTTTGCTTCAGCGTTTAATCTTTGCCTATTGATCAAATTTATGTCTTCTTTGTGCATCTTCG : GTGACACTGCTATTTTGGATAAAGACATTGCCTAGTCTTTAAATGATCATGAAGTGTTATCAGGATATAGTTTCCTGATTGATTCATAGATTGCACCAATGGAGAAATCCAGAAGCAAAAGTTGGGTTGGGAGCATTTACCACAAGTTTGAGGTTGTGTGTCAGGAGGTCGATGAATTTGTAACTAAG : GACACAGTTAAGTATGTCGAGAATCAGGTGCAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGAGTTTCTTATCCCTGTGGACAGTCATGTAAAAAAAGAAGCACAGGCTGTCAATGAGAAGCCAAAGCACGCCAGTGACACTCATACTAGTTCAGTGGCCAACACTACTCAGAACCCTATCCAAGAGAAATCATGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGTGTAGCTTCTGAAGAAGCAGAAATTGATCTTTCTGTAGGAAATGAGTGTGCCACTGCGATTTGTAAGAACTCATGTAATGTTTTTAAAGAGAATATGACAAGGGAGGAAGCACTGGTAGTTGACAAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGATTCGAAAGATACCATGTGCTATAGCTTTTCAGATGATGGTAAGTGTTTTTCTGATGTATCAAGCTCTCAGATTATACGACAAGATGATATGGTCGGGGAGGAACAACCACTTGCTAAGGGATCAAGTTCATTTTTGGATAATTTGTCTACATCACAACTCACGGCCTCTATTAATGAAAAAATGTTTGATACTTCTCCTGATGCTATCAACTGTATTTCTAATGTATCAAGTAGTCAAATGGTTTTGCAACGGAACATCACTAGGGAGGTGGAACCTGTCACTGATCAATCAATTTCCTTTGGAGATATGGCTCTATCAAAGTCATTATCATTTTCAATGGAGGAAAGTGAAGGAAATCCCACCATGACTAAGTTACAACGTCCAACTTCAGTTTATGATACAGAACTTAGGACCAACCCAGAGGATGAGAGCATTTCCAATGCTTCAATAACTCTGACGAATTTGCAAGACAATATCATCAGTGAGGATCGACTTGCATCCAAGGAATCAAGTTTTGTCAAAGATAAAAGTTTGCCACTAACCCCAGCATTTGCATCTGTTATACCTCCTTCACGAAATGATGCAGGATTTGGGGCGTCCATTGCCGCGAGTAAGAGTTTTTTGGGTGATGTTACTTTTGTATCTGAAGAGTCTAGTACAACCTTGGCATTAGAAGATGCTCCAAGCGCACTTCAGTCATCTGAACTTGTACTTTCTCGTGTTATGGAGAACAAAAGTATGGATGTTGACACTGGAATATCAAACTGTTCTCTGTTAAAAGAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCCGAGTCTGATTTAAGTATCTTCACTGGCCACTCATCTGCCTTGCCTACTTCCTTAGTGAGTGCAAACAATGTTGTTTCTGCCAATCCAGTTCTCTCAAGTACTCTGTTGACAGATTTCAGTG : AAGTAAATGCCTCTAGTTCTCACGAGTTGGTTGGAAATGGTAGGTCCGTTCAAAATGACCTCGAGTGTTGTCCAAGCCCTCAGCTGATATATCCCGCAGAAATAG : GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG : GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCAATCTATATGCAGTGGTTGTTTTGTTCTC</gDNA_template>
            <first_frame> Y  C  A  C  H  H  *  *  Y  F  F  S  F  Y  M  Y  M  H  L  L  H  L  F  S  S  V  L  L  L  Q  R  L  I  F  A  Y  *  S  N  L  C  L  L  C  A  S  S  :  V  T  L  L  F  W  I  K  T  L  P  S  L  *  M  I  M  K  C  Y  Q  D  I  V  S  *  L  I  H  R  L  H  Q  W  R  N  P  E  A  K  V  G  L  G  A  F  T  T  S  L  R  L  C  V  R  R  S  M  N  L  *  L  R :   T  Q  L  S  M  S  R  I  R  C  K  L  L  V  Q  T  *  K  S  F  T  L  V  W  C  Q  S  F  L  S  L  W  T  V  M  *  K  K  K  H  R  L  S  M  R  S  Q  S  T  P  V  T  L  I  L  V  Q  W  P  T  L  L  R  T  L  S  K  R  N  H  V  R  I  R  I  P  L  K  V  M  L  L  Q  L  Q  L  N  L  M  V  *  L  L  K  K  Q  K  L  I  F  L  *  E  M  S  V  P  L  R  F  V  R  T  H  V  M  F  L  K  R  I  *  Q  G  R  K  H  W  *  L  T  N  Q  V  L  Q  K  T  E  F  H  L  N  P  V  L  T  K  I  R  K  I  P  C  A  I  A  F  Q  M  M  V  S  V  F  L  M  Y  Q  A  L  R  L  Y  D  K  M  I  W  S  G  R  N  N  H  L  L  R  D  Q  V  H  F  W  I  I  C  L  H  H  N  S  R  P  L  L  M  K  K  C  L  I  L  L  L  M  L  S  T  V  F  L  M  Y  Q  V  V  K  W  F  C  N  G  T  S  L  G  R  W  N  L  S  L  I  N  Q  F  P  L  E  I  W  L  Y  Q  S  H  Y  H  F  Q  W  R  K  V  K  E  I  P  P  *  L  S  Y  N  V  Q  L  Q  F  M  I  Q  N  L  G  P  T  Q  R  M  R  A  F  P  M  L  Q  *  L  *  R  I  C  K  T  I  S  S  V  R  I  D  L  H  P  R  N  Q  V  L  S  K  I  K  V  C  H  *  P  Q  H  L  H  L  L  Y  L  L  H  E  M  M  Q  D  L  G  R  P  L  P  R  V  R  V  F  W  V  M  L  L  L  Y  L  K  S  L  V  Q  P  W  H  *  K  M  L  Q  A  H  F  S  H  L  N  L  Y  F  L  V  L  W  R  T  K  V  W  M  L  T  L  E  Y  Q  T  V  L  C  *  K  N  L  Q  A  C  Q  L  P  Q  L  E  T  V  C  R  K  P  S  L  I  *  V  S  S  L  A  T  H  L  P  C  L  L  P  *  *  V  Q  T  M  L  F  L  P  I  Q  F  S  Q  V  L  C  *  Q  I  S  V  :  K  *  M  P  L  V  L  T  S  W  L  E  M  V  G  P  F  K  M  T  S  S  V  V  Q  A  L  S  *  Y  I  P  Q  K  *  :  D  V  *  M  I  A  P  L  I  F  R  A  W  K  Q  L  I  *  L  I  R  N  C  P  R  K  V  V  P  S  L  T  T  N  Y  T  I  S  F  L  L  G  Q  E  N  I  S  R  T  R :   N  *  Y  R  R  H  L  L  L  E  R  E  E  *  R  N  T  S  N  W  L  F  C  M  Q  T  W  M  L  K  R  A  S  T  L  S  S  L  N  Y  L  L  F  L  H  H  V  Y  T  Q  R  N  R  P  H  A  T  S  V  N  L  S  G  S  S  C  K  *  A  F  F  P  V  K  T  T  P  *  *  *  F  L  L  R  S  L  S  L  *  R  F  R  Y  N  G  *  H  N  *  A  N  H  *  S  Y  C  E  I  N  G  R  N  Y  I  L  F  F  P  F  I  *  *  D  N  N  F  *  *  I  F  *  S  L  L  F  T  C  D  I  V  S  A  L  R  F  W  R  H  D  Q  R  A  Q  L  V  L  S  V  I  S  *  F  *  A  M  Y  P  N  F  *  C  Q  S  I  C  S  G  C  F  V  L </first_frame>
            <second_frame>  T  V  L  V  T  I  N  N  I  F  S  L  F  I  C  I  C  I  S  F  I  F  L  A  Q  C  F  C  F  S  V  *  S  L  P  I  D  Q  I  Y  V  F  F  V  H  L  R :   *  H  C  Y  F  G  *  R  H  C  L  V  F  K  *  S  *  S  V  I  R  I  *  F  P  D  *  F  I  D  C  T  N  G  E  I  Q  K  Q  K  L  G  W  E  H  L  P  Q  V  *  G  C  V  S  G  G  R  *  I  C  N  *   : G  H  S  *  V  C  R  E  S  G  A  N  C  W  C  K  H  E  K  V  L  L  W  C  G  A  R  V  S  Y  P  C  G  Q  S  C  K  K  R  S  T  G  C  Q  *  E  A  K  A  R  Q  *  H  S  Y  *  F  S  G  Q  H  Y  S  E  P  Y  P  R  E  I  M  S  E  S  E  F  P  *  K  S  C  C  F  N  F  N  *  T  *  W  C  S  F  *  R  S  R  N  *  S  F  C  R  K  *  V  C  H  C  D  L  *  E  L  M  *  C  F  *  R  E  Y  D  K  G  G  S  T  G  S  *  Q  T  K  Y  F  R  R  Q  S  F  I  *  I  L  F  *  Q  R  F  E  R  Y  H  V  L  *  L  F  R  *  W  *  V  F  F  *  C  I  K  L  S  D  Y  T  T  R  *  Y  G  R  G  G  T  T  T  C  *  G  I  K  F  I  F  G  *  F  V  Y  I  T  T  H  G  L  Y  *  *  K  N  V  *  Y  F  S  *  C  Y  Q  L  Y  F  *  C  I  K  *  S  N  G  F  A  T  E  H  H  *  G  G  G  T  C  H  *  S  I  N  F  L  W  R  Y  G  S  I  K  V  I  I  I  F  N  G  G  K  *  R  K  S  H  H  D  *  V  T  T  S  N  F  S  L  *  Y  R  T  *  D  Q  P  R  G  *  E  H  F  Q  C  F  N  N  S  D  E  F  A  R  Q  Y  H  Q  *  G  S  T  C  I  Q  G  I  K  F  C  Q  R  *  K  F  A  T  N  P  S  I  C  I  C  Y  T  S  F  T  K  *  C  R  I  W  G  V  H  C  R  E  *  E  F  F  G  *  C  Y  F  C  I  *  R  V  *  Y  N  L  G  I  R  R  C  S  K  R  T  S  V  I  *  T  C  T  F  S  C  Y  G  E  Q  K  Y  G  C  *  H  W  N  I  K  L  F  S  V  K  R  I  F  K  P  V  N  F  L  N  W  K  L  Y  A  G  S  R  V  *  F  K  Y  L  H  W  P  L  I  C  L  A  Y  F  L  S  E  C  K  Q  C  C  F  C  Q  S  S  S  L  K  Y  S  V  D  R  F  Q  * :   S  K  C  L  *  F  S  R  V  G  W  K  W  *  V  R  S  K  *  P  R  V  L  S  K  P  S  A  D  I  S  R  R  N  R :   M  Y  E  *  *  L  H  *  S  S  G  H  G  N  N  *  S  N  *  *  G  I  A  Q  G  K  L  C  L  H  *  L  Q  I  T  P  S  R  F  F  *  A  K  K  I  *  V  V  Q   : G  I  D  T  G  G  I  C  S  S  K  E  K  N  K  G  I  R  A  I  G  C  F  V  C  R  R  G  C  *  N  E  P  A  R  *  A  L  S  I  T  F  S  S  F  T  M  F  T  L  N  G  I  V  H  M  Q  H  L  *  T  *  V  G  A  P  V  N  E  P  F  F  L  *  K  Q  P  H  D  N  N  F  C  *  E  V  S  L  C  K  G  S  A  I  T  V  S  I  I  E  L  I  I  S  P  T  V  R  L  M  V  E  T  T  S  Y  F  S  L  S  Y  N  K  I  T  I  F  D  K  Y  F  D  L  F  C  S  L  V  T  L  S  Q  H  *  G  F  G  D  M  I  K  E  P  S  W  F  *  V  L  F  L  D  S  K  Q  C  T  Q  I  S  N  V  N  L  Y  A  V  V  V  L  F   </second_frame>
            <third_frame>   L  C  L  S  P  L  I  I  F  F  L  F  L  Y  V  Y  A  S  P  S  S  F  *  L  S  A  F  A  S  A  F  N  L  C  L  L  I  K  F  M  S  S  L  C  I  F   : G  D  T  A  I  L  D  K  D  I  A  *  S  L  N  D  H  E  V  L  S  G  Y  S  F  L  I  D  S  *  I  A  P  M  E  K  S  R  S  K  S  W  V  G  S  I  Y  H  K  F  E  V  V  C  Q  E  V  D  E  F  V  T  K  :  D  T  V  K  Y  V  E  N  Q  V  Q  T  V  G  A  N  M  K  K  F  Y  S  G  V  V  P  E  F  L  I  P  V  D  S  H  V  K  K  E  A  Q  A  V  N  E  K  P  K  H  A  S  D  T  H  T  S  S  V  A  N  T  T  Q  N  P  I  Q  E  K  S  C  Q  N  Q  N  S  L  E  S  H  A  A  S  T  S  T  E  L  D  G  V  A  S  E  E  A  E  I  D  L  S  V  G  N  E  C  A  T  A  I  C  K  N  S  C  N  V  F  K  E  N  M  T  R  E  E  A  L  V  V  D  K  P  S  T  S  E  D  R  V  S  S  E  S  C  S  D  K  D  S  K  D  T  M  C  Y  S  F  S  D  D  G  K  C  F  S  D  V  S  S  S  Q  I  I  R  Q  D  D  M  V  G  E  E  Q  P  L  A  K  G  S  S  S  F  L  D  N  L  S  T  S  Q  L  T  A  S  I  N  E  K  M  F  D  T  S  P  D  A  I  N  C  I  S  N  V  S  S  S  Q  M  V  L  Q  R  N  I  T  R  E  V  E  P  V  T  D  Q  S  I  S  F  G  D  M  A  L  S  K  S  L  S  F  S  M  E  E  S  E  G  N  P  T  M  T  K  L  Q  R  P  T  S  V  Y  D  T  E  L  R  T  N  P  E  D  E  S  I  S  N  A  S  I  T  L  T  N  L  Q  D  N  I  I  S  E  D  R  L  A  S  K  E  S  S  F  V  K  D  K  S  L  P  L  T  P  A  F  A  S  V  I  P  P  S  R  N  D  A  G  F  G  A  S  I  A  A  S  K  S  F  L  G  D  V  T  F  V  S  E  E  S  S  T  T  L  A  L  E  D  A  P  S  A  L  Q  S  S  E  L  V  L  S  R  V  M  E  N  K  S  M  D  V  D  T  G  I  S  N  C  S  L  L  K  E  S  S  S  L  S  T  S  S  I  G  N  C  M  Q  E  A  E  S  D  L  S  I  F  T  G  H  S  S  A  L  P  T  S  L  V  S  A  N  N  V  V  S  A  N  P  V  L  S  S  T  L  L  T  D  F  S   : E  V  N  A  S  S  S  H  E  L  V  G  N  G  R  S  V  Q  N  D  L  E  C  C  P  S  P  Q  L  I  Y  P  A  E  I   : G  C  M  N  D  S  S  I  D  L  P  G  M  E  T  I  D  L  T  D  K  E  L  P  K  E  S  C  A  F  I  D  Y  K  L  H  H  L  V  S  S  R  P  R  K  Y  K  S  Y  K  :  E  L  I  Q  E  A  F  A  P  R  K  R  R  I  K  E  Y  E  Q  L  A  V  L  Y  A  D  V  D  A  E  T  S  Q  H  V  E  L  S  Q  L  P  S  L  P  S  P  C  L  H  S  T  E  S  S  T  C  N  I  C  E  P  E  W  E  L  L  *  M  S  L  F  S  C  E  N  N  P  M  I  I  I  S  A  E  K  S  L  F  V  K  V  P  L  *  R  L  A  *  L  S  *  S  L  V  L  L  *  D  *  W  *  K  L  H  L  I  F  P  F  H  I  I  R  *  Q  F  L  I  N  I  L  I  S  F  V  H  L  *  H  C  L  S  I  K  V  L  E  T  *  S  K  S  P  A  G  F  E  C  Y  F  L  I  L  S  N  V  P  K  F  L  M  S  I  Y  M  Q  W  L  F  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26239" stop="26141"/>
                    <exon start="25960" stop="24562"/>
                    <exon start="24426" stop="24322"/>
                    <exon start="23300" stop="23152"/>
                    <exon start="23070" stop="22870"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1950</number_coding_nucleotides>
                  <number_encoded_amino_acids>650</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IAPMEKSRSKSWVGSIYHKFEVVCQEVDEFVTKDTVKYVENQVQTVGANMKKFYSGVVPEFLIPVDSHVKKEAQAVNEKPKHASDTHTSSVANTTQNPIQEKSCQNQNSLESHAASTSTELDGVASEEAEIDLSVGNECATAICKNSCNVFKENMTREEALVVDKPSTSEDRVSSESCSDKDSKDTMCYSFSDDGKCFSDVSSSQIIRQDDMVGEEQPLAKGSSSFLDNLSTSQLTASINEKMFDTSPDAINCISNVSSSQMVLQRNITREVEPVTDQSISFGDMALSKSLSFSMEESEGNPTMTKLQRPTSVYDTELRTNPEDESISNASITLTNLQDNIISEDRLASKESSFVKDKSLPLTPAFASVIPPSRNDAGFGASIAASKSFLGDVTFVSEESSTTLALEDAPSALQSSELVLSRVMENKSMDVDTGISNCSLLKESSSLSTSSIGNCMQEAESDLSIFTGHSSALPTSLVSANNVVSANPVLSSTLLTDFSEVNASSSHELVGNGRSVQNDLECCPSPQLIYPAEIGCMNDSSIDLPGMETIDLTDKELPKESCAFIDYKLHHLVSSRPRKYKSYKELIQEAFAPRKRRIKEYEQLAVLYADVDAETSQHVELSQLPSLPSPCLHSTESSTCNICEPEWELL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="23834" e_stop="23793"/>
            <exon e_start="23300" e_stop="23152"/>
            <exon e_start="23070" e_stop="22527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23834" e_stop="23793" e_length="42"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="23792" i_stop="23301" i_length="492"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23300" e_stop="23152" e_length="149"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.979">
            <gDNA_intron_boundary i_start="23151" i_stop="23071" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="23070" e_stop="22527" e_length="544"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23834" stop="23793"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23834" stop="23793"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23834" stop="23793"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23834" stop="23793"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23834" stop="23793"/>
              <exon start="23300" stop="23152"/>
              <exon start="23070" stop="22836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23010" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22990" stop="22698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22979" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22963" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226863" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22934" stop="22527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353555" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22899" stop="22555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219942" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAATAAAAGGGTTGTGGGATTTCACTAGAGGAACCTCTGTG : GATGTATGAATGATAGCTCCATTGATCTTCCGGGCATGGAAACAATTGATCTAACTGATAAGGAATTGCCCAAGGAAAGTTGTGCCTTCATTGACTACAAATTACACCATCTCGTTTCTTCTAGGCCAAGAAAATATAAGTCGTACAAG : GAATTGATACAGGAGGCATTTGCTCCTCGAAAGAGAAGAATAAAGGAATACGAGCAATTGGCTGTTTTGTATGCAGACGTGGATGCTGAAACGAGCCAGCACGTTGAGCTCTCTCAATTACCTTCTCTTCCTTCACCATGTTTACACTCAACGGAATCGTCCACATGCAACATCTGTGAACCTGAGTGGGAGCTCCTGTAAATGAGCCTTTTTTCCTGTGAAAACAACCCCATGATAATAATTTCTGCTGAGAAGTCTCTCTTTGTAAAGGTTCCGCTATAACGGTTAGCATAATTGAGCTAATCATTAGTCCTACTGTGAGATTAATGGTAGAAACTACATCTTATTTTTCCCTTTCATATAATAAGATAACAATTTTTGATAAATATTTTGATCTCTTTTGTTCACTTGTGACATTGTCTCAGCATTAAGGTTTTGGAGACATGATCAAAGAGCCCAGCTGGTTTTGAGTGTTATTTCTTGATTCTAAGCAATGTACCCAAATTTCTAATGTCAATCTATATGCAGTGGTTGTTTTGTTCTC</gDNA_template>
            <first_frame> R  I  K  G  L  W  D  F  T  R  G  T  S  V  :  D  V  *  M  I  A  P  L  I  F  R  A  W  K  Q  L  I  *  L  I  R  N  C  P  R  K  V  V  P  S  L  T  T  N  Y  T  I  S  F  L  L  G  Q  E  N  I  S  R  T  R :   N  *  Y  R  R  H  L  L  L  E  R  E  E  *  R  N  T  S  N  W  L  F  C  M  Q  T  W  M  L  K  R  A  S  T  L  S  S  L  N  Y  L  L  F  L  H  H  V  Y  T  Q  R  N  R  P  H  A  T  S  V  N  L  S  G  S  S  C  K  *  A  F  F  P  V  K  T  T  P  *  *  *  F  L  L  R  S  L  S  L  *  R  F  R  Y  N  G  *  H  N  *  A  N  H  *  S  Y  C  E  I  N  G  R  N  Y  I  L  F  F  P  F  I  *  *  D  N  N  F  *  *  I  F  *  S  L  L  F  T  C  D  I  V  S  A  L  R  F  W  R  H  D  Q  R  A  Q  L  V  L  S  V  I  S  *  F  *  A  M  Y  P  N  F  *  C  Q  S  I  C  S  G  C  F  V  L </first_frame>
            <second_frame>  E  *  K  G  C  G  I  S  L  E  E  P  L  W :   M  Y  E  *  *  L  H  *  S  S  G  H  G  N  N  *  S  N  *  *  G  I  A  Q  G  K  L  C  L  H  *  L  Q  I  T  P  S  R  F  F  *  A  K  K  I  *  V  V  Q   : G  I  D  T  G  G  I  C  S  S  K  E  K  N  K  G  I  R  A  I  G  C  F  V  C  R  R  G  C  *  N  E  P  A  R  *  A  L  S  I  T  F  S  S  F  T  M  F  T  L  N  G  I  V  H  M  Q  H  L  *  T  *  V  G  A  P  V  N  E  P  F  F  L  *  K  Q  P  H  D  N  N  F  C  *  E  V  S  L  C  K  G  S  A  I  T  V  S  I  I  E  L  I  I  S  P  T  V  R  L  M  V  E  T  T  S  Y  F  S  L  S  Y  N  K  I  T  I  F  D  K  Y  F  D  L  F  C  S  L  V  T  L  S  Q  H  *  G  F  G  D  M  I  K  E  P  S  W  F  *  V  L  F  L  D  S  K  Q  C  T  Q  I  S  N  V  N  L  Y  A  V  V  V  L  F   </second_frame>
            <third_frame>   N  K  R  V  V  G  F  H  *  R  N  L  C   : G  C  M  N  D  S  S  I  D  L  P  G  M  E  T  I  D  L  T  D  K  E  L  P  K  E  S  C  A  F  I  D  Y  K  L  H  H  L  V  S  S  R  P  R  K  Y  K  S  Y  K  :  E  L  I  Q  E  A  F  A  P  R  K  R  R  I  K  E  Y  E  Q  L  A  V  L  Y  A  D  V  D  A  E  T  S  Q  H  V  E  L  S  Q  L  P  S  L  P  S  P  C  L  H  S  T  E  S  S  T  C  N  I  C  E  P  E  W  E  L  L  *  M  S  L  F  S  C  E  N  N  P  M  I  I  I  S  A  E  K  S  L  F  V  K  V  P  L  *  R  L  A  *  L  S  *  S  L  V  L  L  *  D  *  W  *  K  L  H  L  I  F  P  F  H  I  I  R  *  Q  F  L  I  N  I  L  I  S  F  V  H  L  *  H  C  L  S  I  K  V  L  E  T  *  S  K  S  P  A  G  F  E  C  Y  F  L  I  L  S  N  V  P  K  F  L  M  S  I  Y  M  Q  W  L  F  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23805" stop="23793"/>
                    <exon start="23300" stop="23152"/>
                    <exon start="23070" stop="22870"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNLCGCMNDSSIDLPGMETIDLTDKELPKESCAFIDYKLHHLVSSRPRKYKSYKELIQEAFAPRKRRIKEYEQLAVLYADVDAETSQHVELSQLPSLPSPCLHSTESSTCNICEPEWELL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="40371" PGL_stop="41031"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40371" e_stop="41031"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="40371" e_stop="41031" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40371" stop="41031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40439" stop="40914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341404" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGGAAGCTTTATGCTTACAAGTTACAAATGATTGCATTTCCAAAAAAAAACTCTCATGGTACAATTGCGACATTTACTTAAATAGAAAGAAAAAGGAAATAGTCTCAATGAATACCTAATCTAATTATACGTATTCCAGGTCATATGTACATCTTAAAATATAAATGAAGTGAAAAAGCTCCTAATTCCACACGCTATGGAGCAAAATCCTACAAAGAAATAAATTCAACAGATATAAGGAAGATAGTCGAGGAAATTTGATTTACCATGATGTGTTTGACTCAGCTTTTACGATCATCTATTGTAGTAAAAGTCATTGTTCCATGTGTCGCTGTTGTGTTCGCAGATGAAGAAGAATCAACTTGTTTACCCGAGCCAGCAGATAGCGTGTCTGATGATGTATTTTTCTGATTCCTGAGACTTACTAGATCGGATAACATGCCTGGCTCAGATATCTCTTCATCATTCACTTGCATCTCACCAGTCAGCAATTTCACCACAGTGGACATCGATGGTCGGCTTTTGGGCATGACTTGGGTGCATAAGAGAGACACCTTCAAGAATTTGCAAGCATCAACAACATCGAAGTCATCTCCCAATAATGCATCTACCAATTGAATGAGCTCCCCCTTCTTGAACAGTCTCCATGCCTGCATATCA</gDNA_template>
            <first_frame> M  E  A  L  C  L  Q  V  T  N  D  C  I  S  K  K  K  L  S  W  Y  N  C  D  I  Y  L  N  R  K  K  K  E  I  V  S  M  N  T  *  S  N  Y  T  Y  S  R  S  Y  V  H  L  K  I  *  M  K  *  K  S  S  *  F  H  T  L  W  S  K  I  L  Q  R  N  K  F  N  R  Y  K  E  D  S  R  G  N  L  I  Y  H  D  V  F  D  S  A  F  T  I  I  Y  C  S  K  S  H  C  S  M  C  R  C  C  V  R  R  *  R  R  I  N  L  F  T  R  A  S  R  *  R  V  *  *  C  I  F  L  I  P  E  T  Y  *  I  G  *  H  A  W  L  R  Y  L  F  I  I  H  L  H  L  T  S  Q  Q  F  H  H  S  G  H  R  W  S  A  F  G  H  D  L  G  A  *  E  R  H  L  Q  E  F  A  S  I  N  N  I  E  V  I  S  Q  *  C  I  Y  Q  L  N  E  L  P  L  L  E  Q  S  P  C  L  H  I  </first_frame>
            <second_frame>  W  K  L  Y  A  Y  K  L  Q  M  I  A  F  P  K  K  N  S  H  G  T  I  A  T  F  T  *  I  E  R  K  R  K  *  S  Q  *  I  P  N  L  I  I  R  I  P  G  H  M  Y  I  L  K  Y  K  *  S  E  K  A  P  N  S  T  R  Y  G  A  K  S  Y  K  E  I  N  S  T  D  I  R  K  I  V  E  E  I  *  F  T  M  M  C  L  T  Q  L  L  R  S  S  I  V  V  K  V  I  V  P  C  V  A  V  V  F  A  D  E  E  E  S  T  C  L  P  E  P  A  D  S  V  S  D  D  V  F  F  *  F  L  R  L  T  R  S  D  N  M  P  G  S  D  I  S  S  S  F  T  C  I  S  P  V  S  N  F  T  T  V  D  I  D  G  R  L  L  G  M  T  W  V  H  K  R  D  T  F  K  N  L  Q  A  S  T  T  S  K  S  S  P  N  N  A  S  T  N  *  M  S  S  P  F  L  N  S  L  H  A  C  I  S </second_frame>
            <third_frame>   G  S  F  M  L  T  S  Y  K  *  L  H  F  Q  K  K  T  L  M  V  Q  L  R  H  L  L  K  *  K  E  K  G  N  S  L  N  E  Y  L  I  *  L  Y  V  F  Q  V  I  C  T  S  *  N  I  N  E  V  K  K  L  L  I  P  H  A  M  E  Q  N  P  T  K  K  *  I  Q  Q  I  *  G  R  *  S  R  K  F  D  L  P  *  C  V  *  L  S  F  Y  D  H  L  L  *  *  K  S  L  F  H  V  S  L  L  C  S  Q  M  K  K  N  Q  L  V  Y  P  S  Q  Q  I  A  C  L  M  M  Y  F  S  D  S  *  D  L  L  D  R  I  T  C  L  A  Q  I  S  L  H  H  S  L  A  S  H  Q  S  A  I  S  P  Q  W  T  S  M  V  G  F  W  A  *  L  G  C  I  R  E  T  P  S  R  I  C  K  H  Q  Q  H  R  S  H  L  P  I  M  H  L  P  I  E  *  A  P  P  S  *  T  V  S  M  P  A  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40783" stop="40989"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLRLTRSDNMPGSDISSSFTCISPVSNFTTVDIDGRLLGMTWVHKRDTFKNLQASTTSKSSPNNASTN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="40788" PGL_stop="40374"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40788" e_stop="40374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="40788" e_stop="40374" e_length="415"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40788" stop="40374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614309" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGAATCAGAAAAATACATCATCAGACACGCTATCTGCTGGCTCGGGTAAACAAGTTGATTCTTCTTCATCTGCGAACACAACAGCGACACATGGAACAATGACTTTTACTACAATAGATGATCGTAAAAGCTGAGTCAAACACATCATGGTAAATCAAATTTCCTCGACTATCTTCCTTATATCTGTTGAATTTATTTCTTTGTAGGATTTTGCTCCATAGCGTGTGGAATTAGGAGCTTTTTCACTTCATTTATATTTTAAGATGTACATATGACCTGGAATACGTATAATTAGATTAGGTATTCATTGAGACTATTTCCTTTTTCTTTCTATTTAAGTAAATGTCGCAATTGTACCATGAGAGTTTTTTTTTGGAAATGCAATCATTTGTAACTTGTAAGCATAAAGCTTC</gDNA_template>
            <first_frame> Q  E  S  E  K  Y  I  I  R  H  A  I  C  W  L  G  *  T  S  *  F  F  F  I  C  E  H  N  S  D  T  W  N  N  D  F  Y  Y  N  R  *  S  *  K  L  S  Q  T  H  H  G  K  S  N  F  L  D  Y  L  P  Y  I  C  *  I  Y  F  F  V  G  F  C  S  I  A  C  G  I  R  S  F  F  T  S  F  I  F  *  D  V  H  M  T  W  N  T  Y  N  *  I  R  Y  S  L  R  L  F  P  F  S  F  Y  L  S  K  C  R  N  C  T  M  R  V  F  F  W  K  C  N  H  L  *  L  V  S  I  K  L  </first_frame>
            <second_frame>  R  N  Q  K  N  T  S  S  D  T  L  S  A  G  S  G  K  Q  V  D  S  S  S  S  A  N  T  T  A  T  H  G  T  M  T  F  T  T  I  D  D  R  K  S  *  V  K  H  I  M  V  N  Q  I  S  S  T  I  F  L  I  S  V  E  F  I  S  L  *  D  F  A  P  *  R  V  E  L  G  A  F  S  L  H  L  Y  F  K  M  Y  I  *  P  G  I  R  I  I  R  L  G  I  H  *  D  Y  F  L  F  L  S  I  *  V  N  V  A  I  V  P  *  E  F  F  F  G  N  A  I  I  C  N  L  *  A  *  S  F </second_frame>
            <third_frame>   G  I  R  K  I  H  H  Q  T  R  Y  L  L  A  R  V  N  K  L  I  L  L  H  L  R  T  Q  Q  R  H  M  E  Q  *  L  L  L  Q  *  M  I  V  K  A  E  S  N  T  S  W  *  I  K  F  P  R  L  S  S  L  Y  L  L  N  L  F  L  C  R  I  L  L  H  S  V  W  N  *  E  L  F  H  F  I  Y  I  L  R  C  T  Y  D  L  E  Y  V  *  L  D  *  V  F  I  E  T  I  S  F  F  F  L  F  K  *  M  S  Q  L  Y  H  E  S  F  F  L  E  M  Q  S  F  V  T  C  K  H  K  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0308M01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="44499" PGL_stop="41773"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43498" e_stop="43345"/>
            <exon e_start="42912" e_stop="42797"/>
            <exon e_start="42715" e_stop="42505"/>
            <exon e_start="42414" e_stop="42177"/>
            <exon e_start="41845" e_stop="41773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43498" e_stop="43345" e_length="154"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.918">
            <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42912" e_stop="42797" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.981">
            <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42715" e_stop="42505" e_length="211"/>
          </exon>
          <intron i_serial="3" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42414" e_stop="42177" e_length="238"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="42176" i_stop="41846" i_length="331"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="41845" e_stop="41773" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43498" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43497" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43492" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466703" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43475" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42177"/>
              <exon start="41845" stop="41773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43475" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42852" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42177"/>
              <exon start="41845" stop="41811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGTAACAGGATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG : AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG : GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG : GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACT : AGGTTATTTGGCCCCTGAATATGCAATGAGAGGGCAGTTGACACGGAAAGCAGATGTATACAGTTTTGGGATT</gDNA_template>
            <first_frame> M  *  Q  D  W  Q  G  S  S  F  F  C  G  L  T  C  F  S  F  C  *  N  K  N  T  G  V  M  T  C  F  G  L  C  L  G  G  K  A  S  P  R  H  N  H  V  V  E  I  D  E   : E  I  S  T  I  E  N  A  R  V  Y  S  Y  R  E  L  R  A  A  T  E  D  F  C  P  V  N  K  I  G  K  G  G  F  G  S  V  Y  K  :  G  R  L  R  D  G  K  M  A  A  I  K  V  L  S  V  E  S  K  Q  G  V  K  E  F  L  T  E  I  K  V  I  S  N  I  E  H  E  N  L  V  K  L  Y  G  C  C  A  E  G  D  H  R  I  L  V  Y  N  Y  L  E  N  N  S  L  S  Q  T  L  L   : G  G  A  H  S  S  L  Q  F  S  W  I  T  R  T  K  I  C  I  G  V  A  R  G  L  A  F  L  H  E  E  V  Q  P  Y  I  V  H  R  D  I  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  L  A  K  L  I  P  A  D  L  T  H  V  S  T  R  V  A  G  T  L :   G  Y  L  A  P  E  Y  A  M  R  G  Q  L  T  R  K  A  D  V  Y  S  F  G  I </first_frame>
            <second_frame>  C  N  R  I  G  R  G  V  L  F  S  V  G  *  P  A  F  L  S  V  E  T  K  T  L  V  *  *  L  V  L  V  S  A  *  E  G  R  H  L  P  V  T  T  M  *  *  K  L  M  K  :  K  F  Q  P  L  R  M  Q  G  C  T  A  T  G  N  C  V  L  Q  P  K  I  F  A  L  *  T  K  *  G  K  E  G  L  V  L  S  T  R :   G  G  *  E  M  E  K  W  L  L  L  R  Y  F  L  L  N  Q  N  K  V  *  R  S  F  *  Q  K  *  R  *  S  Q  I  *  N  M  K  T  W  *  S  C  M  V  V  V  R  K  G  I  I  E  Y  W  C  I  T  T  W  K  I  I  V  F  P  K  L  C  L  :  V  V  H  I  V  A  S  S  L  A  G  *  H  E  L  R  Y  A  L  V  L  H  E  D  L  H  S  S  T  K  K  S  S  L  I  *  F  I  E  T  L  K  Q  V  T  Y  F  S  T  K  T  L  P  Q  K  F  Q  I  L  V  L  L  S  L  F  Q  L  I  *  P  M  L  A  P  V  W  Q  E  H   : *  V  I  W  P  L  N  M  Q  *  E  G  S  *  H  G  K  Q  M  Y  T  V  L  G   </second_frame>
            <third_frame>   V  T  G  L  A  G  E  F  F  F  L  W  V  D  L  L  F  F  L  L  K  Q  K  H  W  C  N  D  L  F  W  S  L  L  R  R  E  G  I  S  P  S  Q  P  C  S  R  N  *  *  R :   N  F  N  H  *  E  C  K  G  V  Q  L  P  G  I  A  C  C  N  R  R  F  L  P  C  K  Q  N  R  E  R  R  V  W  F  C  L  Q   : G  E  A  K  R  W  K  N  G  C  Y  *  G  T  F  C  *  I  K  T  R  C  K  G  V  F  D  R  N  K  G  D  L  K  Y  R  T  *  K  P  G  E  V  V  W  L  L  C  G  R  G  S  *  N  I  G  V  *  L  P  G  K  *  *  S  F  P  N  S  A  W :   W  C  T  *  *  P  P  V  *  L  D  N  T  N  *  D  M  H  W  C  C  T  R  T  C  I  P  P  R  R  S  P  A  L  Y  S  S  *  R  H  *  S  K  *  H  T  S  R  Q  R  P  Y  P  K  N  F  R  F  W  S  C  *  A  Y  S  S  *  F  D  P  C  *  H  P  C  G  R  N  T  :  R  L  F  G  P  *  I  C  N  E  R  A  V  D  T  E  S  R  C  I  Q  F  W  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43435" stop="43345"/>
                    <exon start="42912" stop="42797"/>
                    <exon start="42715" stop="42505"/>
                    <exon start="42414" stop="42177"/>
                    <exon start="41845" stop="41773"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKNTGVMTCFGLCLGGKASPRHNHVVEIDEEISTIENARVYSYRELRAATEDFCPVNKIGKGGFGSVYKGRLRDGKMAAIKVLSVESKQGVKEFLTEIKVISNIEHENLVKLYGCCAEGDHRILVYNYLENNSLSQTLLGGAHSSLQFSWITRTKICIGVARGLAFLHEEVQPYIVHRDIKASNILLDKDLTPKISDFGLAKLIPADLTHVSTRVAGTLGYLAPEYAMRGQLTRKADVYSFGI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44499" e_stop="44447"/>
            <exon e_start="43489" e_stop="43345"/>
            <exon e_start="42912" e_stop="42797"/>
            <exon e_start="42715" e_stop="42505"/>
            <exon e_start="42414" e_stop="42177"/>
            <exon e_start="41845" e_stop="41773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44499" e_stop="44447" e_length="53"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="44446" i_stop="43490" i_length="957"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43489" e_stop="43345" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.918">
            <gDNA_intron_boundary i_start="43344" i_stop="42913" i_length="432"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42912" e_stop="42797" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.981">
            <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42715" e_stop="42505" e_length="211"/>
          </exon>
          <intron i_serial="4" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="42414" e_stop="42177" e_length="238"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="42176" i_stop="41846" i_length="331"/>
          </intron>
          <exon e_serial="6" e_score="0.986">
            <gDNA_exon_boundary e_start="41845" e_stop="41773" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44499" stop="44447"/>
              <exon start="43489" stop="43345"/>
              <exon start="42912" stop="42824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43475" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42177"/>
              <exon start="41845" stop="41773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43475" stop="43345"/>
              <exon start="42912" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42852" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42177"/>
              <exon start="41845" stop="41811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATCTCTCCCAAAGTCATCTCTTCCATTTTCTTCTGCTGCCTGCTTCAACAA : GATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAG : AAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG : GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG : GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACT : AGGTTATTTGGCCCCTGAATATGCAATGAGAGGGCAGTTGACACGGAAAGCAGATGTATACAGTTTTGGGATT</gDNA_template>
            <first_frame> S  S  L  P  K  S  S  L  P  F  S  S  A  A  C  F  N  K :   I  G  R  G  V  L  F  S  V  G  *  P  A  F  L  S  V  E  T  K  T  L  V  *  *  L  V  L  V  S  A  *  E  G  R  H  L  P  V  T  T  M  *  *  K  L  M  K  :  K  F  Q  P  L  R  M  Q  G  C  T  A  T  G  N  C  V  L  Q  P  K  I  F  A  L  *  T  K  *  G  K  E  G  L  V  L  S  T  R :   G  G  *  E  M  E  K  W  L  L  L  R  Y  F  L  L  N  Q  N  K  V  *  R  S  F  *  Q  K  *  R  *  S  Q  I  *  N  M  K  T  W  *  S  C  M  V  V  V  R  K  G  I  I  E  Y  W  C  I  T  T  W  K  I  I  V  F  P  K  L  C  L  :  V  V  H  I  V  A  S  S  L  A  G  *  H  E  L  R  Y  A  L  V  L  H  E  D  L  H  S  S  T  K  K  S  S  L  I  *  F  I  E  T  L  K  Q  V  T  Y  F  S  T  K  T  L  P  Q  K  F  Q  I  L  V  L  L  S  L  F  Q  L  I  *  P  M  L  A  P  V  W  Q  E  H   : *  V  I  W  P  L  N  M  Q  *  E  G  S  *  H  G  K  Q  M  Y  T  V  L  G   </first_frame>
            <second_frame>  H  L  S  Q  S  H  L  F  H  F  L  L  L  P  A  S  T   : R  L  A  G  E  F  F  F  L  W  V  D  L  L  F  F  L  L  K  Q  K  H  W  C  N  D  L  F  W  S  L  L  R  R  E  G  I  S  P  S  Q  P  C  S  R  N  *  *  R :   N  F  N  H  *  E  C  K  G  V  Q  L  P  G  I  A  C  C  N  R  R  F  L  P  C  K  Q  N  R  E  R  R  V  W  F  C  L  Q   : G  E  A  K  R  W  K  N  G  C  Y  *  G  T  F  C  *  I  K  T  R  C  K  G  V  F  D  R  N  K  G  D  L  K  Y  R  T  *  K  P  G  E  V  V  W  L  L  C  G  R  G  S  *  N  I  G  V  *  L  P  G  K  *  *  S  F  P  N  S  A  W :   W  C  T  *  *  P  P  V  *  L  D  N  T  N  *  D  M  H  W  C  C  T  R  T  C  I  P  P  R  R  S  P  A  L  Y  S  S  *  R  H  *  S  K  *  H  T  S  R  Q  R  P  Y  P  K  N  F  R  F  W  S  C  *  A  Y  S  S  *  F  D  P  C  *  H  P  C  G  R  N  T  :  R  L  F  G  P  *  I  C  N  E  R  A  V  D  T  E  S  R  C  I  Q  F  W  D  </second_frame>
            <third_frame>   I  S  P  K  V  I  S  S  I  F  F  C  C  L  L  Q  Q  :  D  W  Q  G  S  S  F  F  C  G  L  T  C  F  S  F  C  *  N  K  N  T  G  V  M  T  C  F  G  L  C  L  G  G  K  A  S  P  R  H  N  H  V  V  E  I  D  E   : E  I  S  T  I  E  N  A  R  V  Y  S  Y  R  E  L  R  A  A  T  E  D  F  C  P  V  N  K  I  G  K  G  G  F  G  S  V  Y  K  :  G  R  L  R  D  G  K  M  A  A  I  K  V  L  S  V  E  S  K  Q  G  V  K  E  F  L  T  E  I  K  V  I  S  N  I  E  H  E  N  L  V  K  L  Y  G  C  C  A  E  G  D  H  R  I  L  V  Y  N  Y  L  E  N  N  S  L  S  Q  T  L  L   : G  G  A  H  S  S  L  Q  F  S  W  I  T  R  T  K  I  C  I  G  V  A  R  G  L  A  F  L  H  E  E  V  Q  P  Y  I  V  H  R  D  I  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  L  A  K  L  I  P  A  D  L  T  H  V  S  T  R  V  A  G  T  L :   G  Y  L  A  P  E  Y  A  M  R  G  Q  L  T  R  K  A  D  V  Y  S  F  G  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43435" stop="43345"/>
                    <exon start="42912" stop="42797"/>
                    <exon start="42715" stop="42505"/>
                    <exon start="42414" stop="42177"/>
                    <exon start="41845" stop="41773"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKNTGVMTCFGLCLGGKASPRHNHVVEIDEEISTIENARVYSYRELRAATEDFCPVNKIGKGGFGSVYKGRLRDGKMAAIKVLSVESKQGVKEFLTEIKVISNIEHENLVKLYGCCAEGDHRILVYNYLENNSLSQTLLGGAHSSLQFSWITRTKICIGVARGLAFLHEEVQPYIVHRDIKASNILLDKDLTPKISDFGLAKLIPADLTHVSTRVAGTLGYLAPEYAMRGQLTRKADVYSFGI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="43489" e_stop="42797"/>
            <exon e_start="42715" e_stop="42505"/>
            <exon e_start="42414" e_stop="42177"/>
            <exon e_start="41845" e_stop="41811"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.981" e_score="0.999"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="43489" e_stop="42797" e_length="693"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.981">
            <gDNA_intron_boundary i_start="42796" i_stop="42716" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42715" e_stop="42505" e_length="211"/>
          </exon>
          <intron i_serial="2" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42504" i_stop="42415" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42414" e_stop="42177" e_length="238"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="42176" i_stop="41846" i_length="331"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41845" e_stop="41811" e_length="35"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43489" stop="42797"/>
              <exon start="42715" stop="42592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42852" stop="42797"/>
              <exon start="42715" stop="42505"/>
              <exon start="42414" stop="42177"/>
              <exon start="41845" stop="41811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTGGCAGGGGAGTTCTTTTTTCTGTGGGTTGACCTGCTTTTCTTTCTGTTGAAACAAAAACACTGGTGTAATGACTTGTTTTGGTCTCTGCTTAGGAGGGAAGGCATCTCCCCGTCACAACCATGTAGTAGAAATTGATGAAGGTTAAAATTTTCAGCGTTTTCTCAACTTTTACTTCTCTTTATGTAAATTGTTGCCAGCTTCTATGATAATATAGCATACTTGAGCATGTTGTCACAATTAGGATTCTTTGTTCTTCTTAAGCATGGACAGACATTGCCTTTTCCATACATGATTTCTCCATAGCGATCCAAGTTGTTGTGGTCTAGTGGTGTGGAGGAGAACCACAAGGTCTCATGTTTAAATTCCAATTGAGGCCAAAAATCACTAGGTGCCACCATCTTCTTATCTGCCTCGTTGGTGGGCAGAGTCATCTGGTACCTGTGTTGGTGGGAGGTAGCAGGTACTCGGTGGAATAATCGAGGTGCAGAGTACCACCTTCATATAAATGATTTAAGTTGTTGCAATTAATCAAGACATGTTAAGGTTTGTCACTATATTTAGAATTGTTGCAGAAATTTCAACCATTGAGAATGCAAGGGTGTACAGCTACCGGGAATTGCGTGCTGCAACCGAAGATTTTTGCCCTGTAAACAAAATAGGGAAAGGAGGGTTTGGTTCTGTCTACAAG : GGGAGGCTAAGAGATGGAAAAATGGCTGCTATTAAGGTACTTTCTGTTGAATCAAAACAAGGTGTAAAGGAGTTTTTGACAGAAATAAAGGTGATCTCAAATATAGAACATGAAAACCTGGTGAAGTTGTATGGTTGTTGTGCGGAAGGGGATCATAGAATATTGGTGTATAACTACCTGGAAAATAATAGTCTTTCCCAAACTCTGCTTG : GTGGTGCACATAGTAGCCTCCAGTTTAGCTGGATAACACGAACTAAGATATGCATTGGTGTTGCACGAGGACTTGCATTCCTCCACGAAGAAGTCCAGCCTTATATAGTTCATAGAGACATTAAAGCAAGTAACATACTTCTCGACAAAGACCTTACCCCAAAAATTTCAGATTTTGGTCTTGCTAAGCTTATTCCAGCTGATTTGACCCATGTTAGCACCCGTGTGGCAGGAACACT : AGGTTATTTGGCCCCTGAATATGCAATGAGAGGGC</gDNA_template>
            <first_frame> D  W  Q  G  S  S  F  F  C  G  L  T  C  F  S  F  C  *  N  K  N  T  G  V  M  T  C  F  G  L  C  L  G  G  K  A  S  P  R  H  N  H  V  V  E  I  D  E  G  *  N  F  Q  R  F  L  N  F  Y  F  S  L  C  K  L  L  P  A  S  M  I  I  *  H  T  *  A  C  C  H  N  *  D  S  L  F  F  L  S  M  D  R  H  C  L  F  H  T  *  F  L  H  S  D  P  S  C  C  G  L  V  V  W  R  R  T  T  R  S  H  V  *  I  P  I  E  A  K  N  H  *  V  P  P  S  S  Y  L  P  R  W  W  A  E  S  S  G  T  C  V  G  G  R  *  Q  V  L  G  G  I  I  E  V  Q  S  T  T  F  I  *  M  I  *  V  V  A  I  N  Q  D  M  L  R  F  V  T  I  F  R  I  V  A  E  I  S  T  I  E  N  A  R  V  Y  S  Y  R  E  L  R  A  A  T  E  D  F  C  P  V  N  K  I  G  K  G  G  F  G  S  V  Y  K  :  G  R  L  R  D  G  K  M  A  A  I  K  V  L  S  V  E  S  K  Q  G  V  K  E  F  L  T  E  I  K  V  I  S  N  I  E  H  E  N  L  V  K  L  Y  G  C  C  A  E  G  D  H  R  I  L  V  Y  N  Y  L  E  N  N  S  L  S  Q  T  L  L   : G  G  A  H  S  S  L  Q  F  S  W  I  T  R  T  K  I  C  I  G  V  A  R  G  L  A  F  L  H  E  E  V  Q  P  Y  I  V  H  R  D  I  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  L  A  K  L  I  P  A  D  L  T  H  V  S  T  R  V  A  G  T  L :   G  Y  L  A  P  E  Y  A  M  R  G  </first_frame>
            <second_frame>  I  G  R  G  V  L  F  S  V  G  *  P  A  F  L  S  V  E  T  K  T  L  V  *  *  L  V  L  V  S  A  *  E  G  R  H  L  P  V  T  T  M  *  *  K  L  M  K  V  K  I  F  S  V  F  S  T  F  T  S  L  Y  V  N  C  C  Q  L  L  *  *  Y  S  I  L  E  H  V  V  T  I  R  I  L  C  S  S  *  A  W  T  D  I  A  F  S  I  H  D  F  S  I  A  I  Q  V  V  V  V  *  W  C  G  G  E  P  Q  G  L  M  F  K  F  Q  L  R  P  K  I  T  R  C  H  H  L  L  I  C  L  V  G  G  Q  S  H  L  V  P  V  L  V  G  G  S  R  Y  S  V  E  *  S  R  C  R  V  P  P  S  Y  K  *  F  K  L  L  Q  L  I  K  T  C  *  G  L  S  L  Y  L  E  L  L  Q  K  F  Q  P  L  R  M  Q  G  C  T  A  T  G  N  C  V  L  Q  P  K  I  F  A  L  *  T  K  *  G  K  E  G  L  V  L  S  T  R :   G  G  *  E  M  E  K  W  L  L  L  R  Y  F  L  L  N  Q  N  K  V  *  R  S  F  *  Q  K  *  R  *  S  Q  I  *  N  M  K  T  W  *  S  C  M  V  V  V  R  K  G  I  I  E  Y  W  C  I  T  T  W  K  I  I  V  F  P  K  L  C  L  :  V  V  H  I  V  A  S  S  L  A  G  *  H  E  L  R  Y  A  L  V  L  H  E  D  L  H  S  S  T  K  K  S  S  L  I  *  F  I  E  T  L  K  Q  V  T  Y  F  S  T  K  T  L  P  Q  K  F  Q  I  L  V  L  L  S  L  F  Q  L  I  *  P  M  L  A  P  V  W  Q  E  H   : *  V  I  W  P  L  N  M  Q  *  E  G </second_frame>
            <third_frame>   L  A  G  E  F  F  F  L  W  V  D  L  L  F  F  L  L  K  Q  K  H  W  C  N  D  L  F  W  S  L  L  R  R  E  G  I  S  P  S  Q  P  C  S  R  N  *  *  R  L  K  F  S  A  F  S  Q  L  L  L  L  F  M  *  I  V  A  S  F  Y  D  N  I  A  Y  L  S  M  L  S  Q  L  G  F  F  V  L  L  K  H  G  Q  T  L  P  F  P  Y  M  I  S  P  *  R  S  K  L  L  W  S  S  G  V  E  E  N  H  K  V  S  C  L  N  S  N  *  G  Q  K  S  L  G  A  T  I  F  L  S  A  S  L  V  G  R  V  I  W  Y  L  C  W  W  E  V  A  G  T  R  W  N  N  R  G  A  E  Y  H  L  H  I  N  D  L  S  C  C  N  *  S  R  H  V  K  V  C  H  Y  I  *  N  C  C  R  N  F  N  H  *  E  C  K  G  V  Q  L  P  G  I  A  C  C  N  R  R  F  L  P  C  K  Q  N  R  E  R  R  V  W  F  C  L  Q   : G  E  A  K  R  W  K  N  G  C  Y  *  G  T  F  C  *  I  K  T  R  C  K  G  V  F  D  R  N  K  G  D  L  K  Y  R  T  *  K  P  G  E  V  V  W  L  L  C  G  R  G  S  *  N  I  G  V  *  L  P  G  K  *  *  S  F  P  N  S  A  W :   W  C  T  *  *  P  P  V  *  L  D  N  T  N  *  D  M  H  W  C  C  T  R  T  C  I  P  P  R  R  S  P  A  L  Y  S  S  *  R  H  *  S  K  *  H  T  S  R  Q  R  P  Y  P  K  N  F  R  F  W  S  C  *  A  Y  S  S  *  F  D  P  C  *  H  P  C  G  R  N  T  :  R  L  F  G  P  *  I  C  N  E  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42970" stop="42797"/>
                    <exon start="42715" stop="42505"/>
                    <exon start="42414" stop="42177"/>
                    <exon start="41845" stop="41812"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVAINQDMLRFVTIFRIVAEISTIENARVYSYRELRAATEDFCPVNKIGKGGFGSVYKGRLRDGKMAAIKVLSVESKQGVKEFLTEIKVISNIEHENLVKLYGCCAEGDHRILVYNYLENNSLSQTLLGGAHSSLQFSWITRTKICIGVARGLAFLHEEVQPYIVHRDIKASNILLDKDLTPKISDFGLAKLIPADLTHVSTRVAGTLGYLAPEYAMRG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="54830" PGL_stop="50179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54830" e_stop="54611"/>
            <exon e_start="54520" e_stop="54320"/>
            <exon e_start="53560" e_stop="53411"/>
            <exon e_start="53308" e_stop="53126"/>
            <exon e_start="51890" e_stop="51810"/>
            <exon e_start="51311" e_stop="51111"/>
            <exon e_start="51034" e_stop="50894"/>
            <exon e_start="50582" e_stop="50191"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.786" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54830" e_stop="54611" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54520" e_stop="54320" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.786" acc_prob="0.997">
            <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53560" e_stop="53411" e_length="150"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.967">
            <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53308" e_stop="53126" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51890" e_stop="51810" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51311" e_stop="51111" e_length="201"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="51034" e_stop="50894" e_length="141"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311"/>
          </intron>
          <exon e_serial="8" e_score="0.992">
            <gDNA_exon_boundary e_start="50582" e_stop="50191" e_length="392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54830" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54815" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54783" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54731" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54727" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54678" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54664" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54367" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51810"/>
              <exon start="51311" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53416" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51810"/>
              <exon start="51311" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53284" stop="53126"/>
              <exon start="51890" stop="51810"/>
              <exon start="51311" stop="51111"/>
              <exon start="51034" stop="50906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51207" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576834" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51158" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E621775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50943" stop="50894"/>
              <exon start="50582" stop="50191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223890" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50942" stop="50894"/>
              <exon start="50582" stop="50191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223779" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTATTAGCCATTTCTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG : GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG : GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA : GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG : GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGG : ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCA : GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAG : GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAA</gDNA_template>
            <first_frame> F  Y  *  P  F  L  S  F  F  L  A  Q  T  Y  Y  K  N  G  S  T  N  F  A  T  P  H  Y  S  F  P  C  L  C  K  T  Q  R  N  P  Q  N  S  I  I  F  H  S  L  H  S  S  Q  L  *  K  I  L  S  R  N  F  N  F  S  F  S  H  G  F  R  Y  *  E   : G  I  G  S  D  C  E  W  N  R  A  D  *  G  Y  S  A  D  R  Y  T  A  E  S  W  C  G  G  Y  C  C  F  R  W  E  S  A  S  D  *  S  D  V  W  N  *  D  R  C  *  C  S  N  Y  G  L  C  R  Y  *  V  *  P  Y  F  A  S   : G  R  G  T  R  C  S  Q  P  W  E  L  Q  N  F  G  K  Y  C  K  K  A  S  *  K  W  K  A  I  C  C  N  M  C  C  S  C  D  S  T  W  I  M  G  A  F  E  G  A  E   : S  N  V  L  S  I  V  Y  G  G  T  V  I  S  C  H  C  C  *  V  K  S  P  K  G  C  K  S  C  D  K  S  W  T  G  N  I  H  R  V  C  C  C  V  G  *  G  V  V  W  K  R  E  G  *  *  S  F  W  P  T   : G  D  A  P  K  S  Q  *  R  I  C  I  C  G  A  *  F  S  K  L  D  P  H  E  *  A  T   : D  S  C  T  Y  C  K  W  F  *  G  N  G  S  Y  Y  Y  Y  *  C  T  S  A  S  K  R  S  S  S  C  G  I  Y  G  R  *  I  G  D  C  C  F  Q  K  S  *  T  S  C  R  C  A  P  *  *  S  C  *  T  V  L  R  S  H  C  P  T   : R  R  S  W  W  C  R  N  I  C  Q  I  R  K  V  G  *  H  A  E  E  A  E  G  I  K  Q  T  I  W  S  N  V  C  I  S  S  S  S  P  R  A  P  W  A  S  P   : G  *  K  G  Y  C  L  S  S  L  V  Q  Q  T  F  R  S  K  *  S  R  K  Q  G  G  G  R  W  K  S  R  Y  Q  Q  R  T  R  N  Y  H  G  V  R  T  G  H  C  R  *  V  Y  W  A  Q  G  N  I  R  A  S  K  G  D  D  F  L  S  I  *  L  F  C  R  Y  D  P  S  L  A  S  Y  T  L  C  Y  M  M  V  *  T  C  S  I  I  N  F  A  I  S  L  C  T  Y  S  F  V  S  V  V  V  S  Y  H  V  V  L  W  W  *  F  K  Y  K  L  S  S  G  N  D  K  K </first_frame>
            <second_frame>  F  I  S  H  F  Y  P  S  F  *  L  K  L  I  I  K  M  A  A  P  I  L  R  H  L  T  T  P  F  P  A  F  V  K  L  N  E  T  P  K  I  Q  S  F  F  T  L  S  T  H  P  N  S  R  K  F  S  R  G  T  S  I  S  V  S  A  M  A  S  A  T  K  K  :  V  L  V  P  I  A  N  G  T  E  P  I  E  A  I  V  P  I  D  I  L  R  R  A  G  A  E  V  I  V  A  S  V  G  N  Q  L  Q  I  E  V  M  Y  G  I  K  I  V  A  D  V  L  I  T  D  C  V  D  T  E  F  D  L  I  S  L  P  :  G  G  V  P  G  A  A  N  L  G  N  C  K  I  L  E  S  I  V  K  K  Q  A  E  N  G  K  L  Y  A  A  I  C  A  A  P  A  I  A  L  G  S  W  G  L  L  K  G  L  K  :  A  T  C  Y  P  S  Y  M  E  E  L  S  S  H  A  I  A  V  E  S  R  V  Q  K  D  A  K  V  V  T  S  R  G  P  A  T  S  I  E  Y  A  V  A  L  V  E  E  L  Y  G  K  E  K  A  N  E  V  S  G  P  L  :  V  M  R  P  N  H  S  E  E  F  A  F  A  E  L  N  S  V  N  W  T  L  T  S  K  P  R  :  I  L  V  P  I  A  N  G  S  E  E  M  E  A  T  I  I  I  D  V  L  R  R  A  N  A  Q  V  V  V  A  S  M  E  D  K  L  E  I  V  A  S  R  K  V  K  L  V  A  D  V  L  L  D  E  A  A  K  Q  S  Y  D  L  I  V  L  P  :  G  G  L  G  G  A  E  T  F  A  K  S  E  K  L  V  D  M  L  K  K  Q  R  E  S  S  K  P  Y  G  A  M  C  A  S  P  A  L  V  L  E  P  H  G  L  L  Q  :  G  K  K  A  T  A  F  P  A  L  C  N  K  L  S  D  P  S  E  A  E  N  R  V  V  V  D  G  N  L  V  T  S  R  G  P  G  T  T  M  E  F  A  L  A  I  A  D  K  F  I  G  H  K  E  T  L  E  L  A  K  E  M  I  F  *  V  F  N  F  F  A  A  M  I  R  L  *  H  H  I  H  F  A  I  *  W  C  K  L  V  V  *  *  T  L  L  Y  H  S  A  L  T  A  L  F  R  W  L  L  V  I  M  L  Y  C  G  G  S  L  N  T  N  Y  L  Q  V  M  T  K   </second_frame>
            <third_frame>   L  L  A  I  S  I  L  L  F  S  S  N  L  L  *  K  W  Q  H  Q  F  C  D  T  S  L  L  L  S  L  P  L  *  N  S  T  K  P  P  K  F  N  H  F  S  L  S  P  L  I  P  T  L  E  N  S  L  E  E  L  Q  F  Q  F  Q  P  W  L  P  L  L  R  R :   Y  W  F  R  L  R  M  E  Q  S  R  L  R  L  *  C  R  *  I  Y  C  G  E  L  V  R  R  L  L  L  L  P  L  G  I  S  F  R  L  K  *  C  M  E  L  R  S  L  L  M  F  *  L  R  I  V  *  I  L  S  L  T  L  F  R  F  R :   E  G  Y  Q  V  Q  P  T  L  G  T  A  K  F  W  K  V  L  *  K  S  K  L  K  M  E  S  Y  M  L  Q  Y  V  L  L  L  R  *  H  L  D  H  G  G  F  *  R  G  *  K :   Q  R  V  I  H  R  I  W  R  N  C  H  L  M  P  L  L  L  S  Q  E  S  K  R  M  Q  K  L  *  Q  V  V  D  R  Q  H  P  S  S  M  L  L  R  W  L  R  S  C  M  E  K  R  R  L  M  K  F  L  A  H  W :   *  C  A  Q  I  T  V  K  N  L  H  L  R  S  L  I  Q  *  I  G  P  S  R  V  S  H  G :   F  L  Y  L  L  Q  M  V  L  R  K  W  K  L  L  L  L  L  M  Y  F  G  E  Q  T  L  K  *  L  W  H  L  W  K  I  N  W  R  L  L  L  P  E  K  L  N  *  L  Q  M  C  S  L  M  K  L  L  N  S  L  T  I  S  L  S  Y  Q :   A  V  L  V  V  P  K  H  L  P  N  Q  K  S  W  L  T  C  *  R  S  R  G  N  Q  A  N  H  M  E  Q  C  V  H  L  Q  L  *  S  *  S  P  M  G  F  S  R :   V  K  R  L  L  P  F  Q  P  C  A  T  N  F  P  I  Q  V  K  Q  K  T  G  W  W  *  M  E  I  S  L  P  A  E  D  Q  E  L  P  W  S  S  H  W  P  L  Q  I  S  L  L  G  T  R  K  H  *  S  *  Q  R  R  *  F  S  K  Y  L  T  F  L  P  L  *  S  V  F  S  I  I  Y  T  L  L  Y  D  G  V  N  L  *  Y  N  K  L  C  Y  I  T  L  H  L  Q  L  C  F  G  G  C  *  L  S  C  C  I  V  V  V  V  *  I  Q  I  I  F  R  *  *  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54799" stop="54611"/>
                    <exon start="54520" stop="54320"/>
                    <exon start="53560" stop="53411"/>
                    <exon start="53308" stop="53126"/>
                    <exon start="51890" stop="51810"/>
                    <exon start="51311" stop="51111"/>
                    <exon start="51034" stop="50894"/>
                    <exon start="50582" stop="50385"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKLIIKMAAPILRHLTTPFPAFVKLNETPKIQSFFTLSTHPNSRKFSRGTSISVSAMASATKKVLVPIANGTEPIEAIVPIDILRRAGAEVIVASVGNQLQIEVMYGIKIVADVLITDCVDTEFDLISLPGGVPGAANLGNCKILESIVKKQAENGKLYAAICAAPAIALGSWGLLKGLKATCYPSYMEELSSHAIAVESRVQKDAKVVTSRGPATSIEYAVALVEELYGKEKANEVSGPLVMRPNHSEEFAFAELNSVNWTLTSKPRILVPIANGSEEMEATIIIDVLRRANAQVVVASMEDKLEIVASRKVKLVADVLLDEAAKQSYDLIVLPGGLGGAETFAKSEKLVDMLKKQRESSKPYGAMCASPALVLEPHGLLQGKKATAFPALCNKLSDPSEAENRVVVDGNLVTSRGPGTTMEFALAIADKFIGHKETLELAKEMIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="54830" e_stop="54611"/>
            <exon e_start="54520" e_stop="54320"/>
            <exon e_start="53560" e_stop="53411"/>
            <exon e_start="53308" e_stop="53126"/>
            <exon e_start="51890" e_stop="51809"/>
            <exon e_start="51311" e_stop="51288"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.786" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54830" e_stop="54611" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="54610" i_stop="54521" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54520" e_stop="54320" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.786" acc_prob="0.997">
            <gDNA_intron_boundary i_start="54319" i_stop="53561" i_length="759"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53560" e_stop="53411" e_length="150"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.967">
            <gDNA_intron_boundary i_start="53410" i_stop="53309" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53308" e_stop="53126" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="53125" i_stop="51891" i_length="1235"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51890" e_stop="51809" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="51808" i_stop="51312" i_length="497"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51311" e_stop="51288" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54830" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54815" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54799" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51809"/>
              <exon start="51311" stop="51288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729833" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54783" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54731" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54727" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53126"/>
              <exon start="51890" stop="51836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54678" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54664" stop="54611"/>
              <exon start="54520" stop="54320"/>
              <exon start="53560" stop="53411"/>
              <exon start="53308" stop="53254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274457" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTATTAGCCATTTCTATCCTTCTTTTTAGCTCAAACTTATTATAAAAATGGCAGCACCAATTTTGCGACACCTCACTACTCCTTTCCCTGCCTTTGTAAAACTCAACGAAACCCCCAAAATTCAATCATTTTTCACTCTCTCCACTCATCCCAACTCTAGAAAATTCTCTCGAGGAACTTCAATTTCAGTTTCAGCCATGGCTTCCGCTACTAAGAAG : GTATTGGTTCCGATTGCGAATGGAACAGAGCCGATTGAGGCTATAGTGCCGATAGATATACTGCGGAGAGCTGGTGCGGAGGTTATTGTTGCTTCCGTTGGGAATCAGCTTCAGATTGAAGTGATGTATGGAATTAAGATCGTTGCTGATGTTCTAATTACGGATTGTGTAGATACTGAGTTTGACCTTATTTCGCTTCCG : GGAGGGGTACCAGGTGCAGCCAACCTTGGGAACTGCAAAATTTTGGAAAGTATTGTAAAAAAGCAAGCTGAAAATGGAAAGCTATATGCTGCAATATGTGCTGCTCCTGCGATAGCACTTGGATCATGGGGGCTTTTGAAGGGGCTGAAA : GCAACGTGTTATCCATCGTATATGGAGGAACTGTCATCTCATGCCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGCAAAAGTTGTGACAAGTCGTGGACCGGCAACATCCATCGAGTATGCTGTTGCGTTGGTTGAGGAGTTGTATGGAAAAGAGAAGGCTAATGAAGTTTCTGGCCCACTG : GTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGGG : ATTCTTGTACCTATTGCAAATGGT</gDNA_template>
            <first_frame> F  Y  *  P  F  L  S  F  F  L  A  Q  T  Y  Y  K  N  G  S  T  N  F  A  T  P  H  Y  S  F  P  C  L  C  K  T  Q  R  N  P  Q  N  S  I  I  F  H  S  L  H  S  S  Q  L  *  K  I  L  S  R  N  F  N  F  S  F  S  H  G  F  R  Y  *  E   : G  I  G  S  D  C  E  W  N  R  A  D  *  G  Y  S  A  D  R  Y  T  A  E  S  W  C  G  G  Y  C  C  F  R  W  E  S  A  S  D  *  S  D  V  W  N  *  D  R  C  *  C  S  N  Y  G  L  C  R  Y  *  V  *  P  Y  F  A  S   : G  R  G  T  R  C  S  Q  P  W  E  L  Q  N  F  G  K  Y  C  K  K  A  S  *  K  W  K  A  I  C  C  N  M  C  C  S  C  D  S  T  W  I  M  G  A  F  E  G  A  E   : S  N  V  L  S  I  V  Y  G  G  T  V  I  S  C  H  C  C  *  V  K  S  P  K  G  C  K  S  C  D  K  S  W  T  G  N  I  H  R  V  C  C  C  V  G  *  G  V  V  W  K  R  E  G  *  *  S  F  W  P  T   : G  D  A  P  K  S  Q  *  R  I  C  I  C  G  A  *  F  S  K  L  D  P  H  E  *  A  T  G :   F  L  Y  L  L  Q  M   </first_frame>
            <second_frame>  F  I  S  H  F  Y  P  S  F  *  L  K  L  I  I  K  M  A  A  P  I  L  R  H  L  T  T  P  F  P  A  F  V  K  L  N  E  T  P  K  I  Q  S  F  F  T  L  S  T  H  P  N  S  R  K  F  S  R  G  T  S  I  S  V  S  A  M  A  S  A  T  K  K  :  V  L  V  P  I  A  N  G  T  E  P  I  E  A  I  V  P  I  D  I  L  R  R  A  G  A  E  V  I  V  A  S  V  G  N  Q  L  Q  I  E  V  M  Y  G  I  K  I  V  A  D  V  L  I  T  D  C  V  D  T  E  F  D  L  I  S  L  P  :  G  G  V  P  G  A  A  N  L  G  N  C  K  I  L  E  S  I  V  K  K  Q  A  E  N  G  K  L  Y  A  A  I  C  A  A  P  A  I  A  L  G  S  W  G  L  L  K  G  L  K  :  A  T  C  Y  P  S  Y  M  E  E  L  S  S  H  A  I  A  V  E  S  R  V  Q  K  D  A  K  V  V  T  S  R  G  P  A  T  S  I  E  Y  A  V  A  L  V  E  E  L  Y  G  K  E  K  A  N  E  V  S  G  P  L  :  V  M  R  P  N  H  S  E  E  F  A  F  A  E  L  N  S  V  N  W  T  L  T  S  K  P  R   : D  S  C  T  Y  C  K  W  </second_frame>
            <third_frame>   L  L  A  I  S  I  L  L  F  S  S  N  L  L  *  K  W  Q  H  Q  F  C  D  T  S  L  L  L  S  L  P  L  *  N  S  T  K  P  P  K  F  N  H  F  S  L  S  P  L  I  P  T  L  E  N  S  L  E  E  L  Q  F  Q  F  Q  P  W  L  P  L  L  R  R :   Y  W  F  R  L  R  M  E  Q  S  R  L  R  L  *  C  R  *  I  Y  C  G  E  L  V  R  R  L  L  L  L  P  L  G  I  S  F  R  L  K  *  C  M  E  L  R  S  L  L  M  F  *  L  R  I  V  *  I  L  S  L  T  L  F  R  F  R :   E  G  Y  Q  V  Q  P  T  L  G  T  A  K  F  W  K  V  L  *  K  S  K  L  K  M  E  S  Y  M  L  Q  Y  V  L  L  L  R  *  H  L  D  H  G  G  F  *  R  G  *  K :   Q  R  V  I  H  R  I  W  R  N  C  H  L  M  P  L  L  L  S  Q  E  S  K  R  M  Q  K  L  *  Q  V  V  D  R  Q  H  P  S  S  M  L  L  R  W  L  R  S  C  M  E  K  R  R  L  M  K  F  L  A  H  W :   *  C  A  Q  I  T  V  K  N  L  H  L  R  S  L  I  Q  *  I  G  P  S  R  V  S  H  G  :  I  L  V  P  I  A  N  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54799" stop="54611"/>
                    <exon start="54520" stop="54320"/>
                    <exon start="53560" stop="53411"/>
                    <exon start="53308" stop="53126"/>
                    <exon start="51890" stop="51809"/>
                    <exon start="51311" stop="51289"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKLIIKMAAPILRHLTTPFPAFVKLNETPKIQSFFTLSTHPNSRKFSRGTSISVSAMASATKKVLVPIANGTEPIEAIVPIDILRRAGAEVIVASVGNQLQIEVMYGIKIVADVLITDCVDTEFDLISLPGGVPGAANLGNCKILESIVKKQAENGKLYAAICAAPAIALGSWGLLKGLKATCYPSYMEELSSHAIAVESRVQKDAKVVTSRGPATSIEYAVALVEELYGKEKANEVSGPLVMRPNHSEEFAFAELNSVNWTLTSKPRDSCTYCKW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="51941" e_stop="51810"/>
            <exon e_start="51311" e_stop="51111"/>
            <exon e_start="51034" e_stop="50894"/>
            <exon e_start="50582" e_stop="50179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="51941" e_stop="51810" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="51809" i_stop="51312" i_length="498"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="51311" e_stop="51111" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51110" i_stop="51035" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51034" e_stop="50894" e_length="141"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50893" i_stop="50583" i_length="311"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="50582" e_stop="50179" e_length="404"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51941" stop="51810"/>
              <exon start="51311" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51207" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576834" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51158" stop="51111"/>
              <exon start="51034" stop="50894"/>
              <exon start="50582" stop="50367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E621775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50943" stop="50894"/>
              <exon start="50582" stop="50191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223890" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50942" stop="50894"/>
              <exon start="50582" stop="50191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223779" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATTTTGCTTTGCCATTTATTTCTGAAATTTTGGGATTATTCTTATTCAGGTGATGCGCCCAAATCACAGTGAAGAATTTGCATTTGCGGAGCTTAATTCAGTAAATTGGACCCTCACGAGTAAGCCACGG : ATTCTTGTACCTATTGCAAATGGTTCTGAGGAAATGGAAGCTACTATTATTATTGATGTACTTCGGCGAGCAAACGCTCAAGTAGTTGTGGCATCTATGGAAGATAAATTGGAGATTGTTGCTTCCAGAAAAGTTAAACTAGTTGCAGATGTGCTCCTTGATGAAGCTGCTAAACAGTCTTACGATCTCATTGTCCTACCA : GGCGGTCTTGGTGGTGCCGAAACATTTGCCAAATCAGAAAAGTTGGTTGACATGCTGAAGAAGCAGAGGGAATCAAGCAAACCATATGGAGCAATGTGTGCATCTCCAGCTCTAGTCCTAGAGCCCCATGGGCTTCTCCAG : GGTAAAAAGGCTACTGCCTTTCCAGCCTTGTGCAACAAACTTTCCGATCCAAGTGAAGCAGAAAACAGGGTGGTGGTAGATGGAAATCTCGTTACCAGCAGAGGACCAGGAACTACCATGGAGTTCGCACTGGCCATTGCAGATAAGTTTATTGGGCACAAGGAAACATTAGAGCTAGCAAAGGAGATGATTTTCTAAGTATTTAACTTTTTTGCCGCTATGATCCGTCTTTAGCATCATATACACTTTGCTATATGATGGTGTAAACTTGTAGTATAATAAACTTTGCTATATCACTCTGCACTTACAGCTTTGTTTCGGTGGTTGTTAGTTATCATGTTGTATTGTGGTGGTAGTTTAAATACAAATTATCTTCAGGTAATGACAAAAAAGTCTCAAGTTTT</gDNA_template>
            <first_frame> *  F  C  F  A  I  Y  F  *  N  F  G  I  I  L  I  Q  V  M  R  P  N  H  S  E  E  F  A  F  A  E  L  N  S  V  N  W  T  L  T  S  K  P  R  :  I  L  V  P  I  A  N  G  S  E  E  M  E  A  T  I  I  I  D  V  L  R  R  A  N  A  Q  V  V  V  A  S  M  E  D  K  L  E  I  V  A  S  R  K  V  K  L  V  A  D  V  L  L  D  E  A  A  K  Q  S  Y  D  L  I  V  L  P  :  G  G  L  G  G  A  E  T  F  A  K  S  E  K  L  V  D  M  L  K  K  Q  R  E  S  S  K  P  Y  G  A  M  C  A  S  P  A  L  V  L  E  P  H  G  L  L  Q  :  G  K  K  A  T  A  F  P  A  L  C  N  K  L  S  D  P  S  E  A  E  N  R  V  V  V  D  G  N  L  V  T  S  R  G  P  G  T  T  M  E  F  A  L  A  I  A  D  K  F  I  G  H  K  E  T  L  E  L  A  K  E  M  I  F  *  V  F  N  F  F  A  A  M  I  R  L  *  H  H  I  H  F  A  I  *  W  C  K  L  V  V  *  *  T  L  L  Y  H  S  A  L  T  A  L  F  R  W  L  L  V  I  M  L  Y  C  G  G  S  L  N  T  N  Y  L  Q  V  M  T  K  K  S  Q  V   </first_frame>
            <second_frame>  D  F  A  L  P  F  I  S  E  I  L  G  L  F  L  F  R  *  C  A  Q  I  T  V  K  N  L  H  L  R  S  L  I  Q  *  I  G  P  S  R  V  S  H  G :   F  L  Y  L  L  Q  M  V  L  R  K  W  K  L  L  L  L  L  M  Y  F  G  E  Q  T  L  K  *  L  W  H  L  W  K  I  N  W  R  L  L  L  P  E  K  L  N  *  L  Q  M  C  S  L  M  K  L  L  N  S  L  T  I  S  L  S  Y  Q :   A  V  L  V  V  P  K  H  L  P  N  Q  K  S  W  L  T  C  *  R  S  R  G  N  Q  A  N  H  M  E  Q  C  V  H  L  Q  L  *  S  *  S  P  M  G  F  S  R :   V  K  R  L  L  P  F  Q  P  C  A  T  N  F  P  I  Q  V  K  Q  K  T  G  W  W  *  M  E  I  S  L  P  A  E  D  Q  E  L  P  W  S  S  H  W  P  L  Q  I  S  L  L  G  T  R  K  H  *  S  *  Q  R  R  *  F  S  K  Y  L  T  F  L  P  L  *  S  V  F  S  I  I  Y  T  L  L  Y  D  G  V  N  L  *  Y  N  K  L  C  Y  I  T  L  H  L  Q  L  C  F  G  G  C  *  L  S  C  C  I  V  V  V  V  *  I  Q  I  I  F  R  *  *  Q  K  S  L  K  F  </second_frame>
            <third_frame>   I  L  L  C  H  L  F  L  K  F  W  D  Y  S  Y  S  G  D  A  P  K  S  Q  *  R  I  C  I  C  G  A  *  F  S  K  L  D  P  H  E  *  A  T   : D  S  C  T  Y  C  K  W  F  *  G  N  G  S  Y  Y  Y  Y  *  C  T  S  A  S  K  R  S  S  S  C  G  I  Y  G  R  *  I  G  D  C  C  F  Q  K  S  *  T  S  C  R  C  A  P  *  *  S  C  *  T  V  L  R  S  H  C  P  T   : R  R  S  W  W  C  R  N  I  C  Q  I  R  K  V  G  *  H  A  E  E  A  E  G  I  K  Q  T  I  W  S  N  V  C  I  S  S  S  S  P  R  A  P  W  A  S  P   : G  *  K  G  Y  C  L  S  S  L  V  Q  Q  T  F  R  S  K  *  S  R  K  Q  G  G  G  R  W  K  S  R  Y  Q  Q  R  T  R  N  Y  H  G  V  R  T  G  H  C  R  *  V  Y  W  A  Q  G  N  I  R  A  S  K  G  D  D  F  L  S  I  *  L  F  C  R  Y  D  P  S  L  A  S  Y  T  L  C  Y  M  M  V  *  T  C  S  I  I  N  F  A  I  S  L  C  T  Y  S  F  V  S  V  V  V  S  Y  H  V  V  L  W  W  *  F  K  Y  K  L  S  S  G  N  D  K  K  V  S  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51914" stop="51810"/>
                    <exon start="51311" stop="51111"/>
                    <exon start="51034" stop="50894"/>
                    <exon start="50582" stop="50385"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFGIILIQVMRPNHSEEFAFAELNSVNWTLTSKPRILVPIANGSEEMEATIIIDVLRRANAQVVVASMEDKLEIVASRKVKLVADVLLDEAAKQSYDLIVLPGGLGGAETFAKSEKLVDMLKKQRESSKPYGAMCASPALVLEPHGLLQGKKATAFPALCNKLSDPSEAENRVVVDGNLVTSRGPGTTMEFALAIADKFIGHKETLELAKEMIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="64966" PGL_stop="66596"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64966" e_stop="65641"/>
            <exon e_start="66498" e_stop="66596"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.995" e_score="0.993"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="64966" e_stop="65641" e_length="676"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.995">
            <gDNA_intron_boundary i_start="65642" i_stop="66497" i_length="856"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="66498" e_stop="66596" e_length="99"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64966" stop="65574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65343" stop="65641"/>
              <exon start="66498" stop="66596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTGGAGTTCATGAAGTAATTACAAGCAAACAAAACTCTGGGCCAAAGAAACGTAAGAAATGCCGTCTTAGTGACGATGATCTCTTAATTTCAGCCGTATTTAGAAACACGACATGCAAATCTGGCAACAAAAGGTCCTCTGGTAAAATCAAACCTCTAAGGAAAAGGAAGAACCAGAAAAGTGGTGGTAAGTTGCTTTTACGTAGTCTTATTAAGGGTGGAAAACACTTCCCCGAAGAAAAATGGCCTACCTTTGCCTCAAGGACTGTGTTATCCTGGTTAATTCATTCTGGGGTTGTCTCCCTAAATGAAATGATCCAGTACCAGAACTTGAAGGATGATTCTGTGGTAAAAACCGGCTATATTACCGCTGATGGAATATCGTGTAATTGCTGTGACGAGGTCCTATCCATCTCTAGCTTCAAAAAGCATGCCGGTTTTAAGCACAATCGCCCCTGTTTGAATCTTTTCATGGAGAATGGTAAGCCATTCACCTTATGTCAGCTTGAGGCTTGGTCAGATGAATACAAGGCACGGAGGGCAGTTTCTCAAACTTCCCAAGCTGAGGAAAGGGACCAAAATGATGACAGTTGCGGGCGATGTGGTGATGGAGGCGAACTGATTTGCTGTGACAATTGTCCAGCTACATTTCATCTAGCTTGTTTGTTCACACAG : GAGCTTCCTGAAGGGAGTTGGTACTGTTCACAATGCACGTGCCAGAAATGTGGGGACGTGGTTAGATGTAGTGAATCAAGTTCTCCTGGTGGATATAAA</gDNA_template>
            <first_frame> E  W  S  S  *  S  N  Y  K  Q  T  K  L  W  A  K  E  T  *  E  M  P  S  *  *  R  *  S  L  N  F  S  R  I  *  K  H  D  M  Q  I  W  Q  Q  K  V  L  W  *  N  Q  T  S  K  E  K  E  E  P  E  K  W  W  *  V  A  F  T  *  S  Y  *  G  W  K  T  L  P  R  R  K  M  A  Y  L  C  L  K  D  C  V  I  L  V  N  S  F  W  G  C  L  P  K  *  N  D  P  V  P  E  L  E  G  *  F  C  G  K  N  R  L  Y  Y  R  *  W  N  I  V  *  L  L  *  R  G  P  I  H  L  *  L  Q  K  A  C  R  F  *  A  Q  S  P  L  F  E  S  F  H  G  E  W  *  A  I  H  L  M  S  A  *  G  L  V  R  *  I  Q  G  T  E  G  S  F  S  N  F  P  S  *  G  K  G  P  K  *  *  Q  L  R  A  M  W  *  W  R  R  T  D  L  L  *  Q  L  S  S  Y  I  S  S  S  L  F  V  H  T   : G  A  S  *  R  E  L  V  L  F  T  M  H  V  P  E  M  W  G  R  G  *  M  *  *  I  K  F  S  W  W  I  *  </first_frame>
            <second_frame>  S  G  V  H  E  V  I  T  S  K  Q  N  S  G  P  K  K  R  K  K  C  R  L  S  D  D  D  L  L  I  S  A  V  F  R  N  T  T  C  K  S  G  N  K  R  S  S  G  K  I  K  P  L  R  K  R  K  N  Q  K  S  G  G  K  L  L  L  R  S  L  I  K  G  G  K  H  F  P  E  E  K  W  P  T  F  A  S  R  T  V  L  S  W  L  I  H  S  G  V  V  S  L  N  E  M  I  Q  Y  Q  N  L  K  D  D  S  V  V  K  T  G  Y  I  T  A  D  G  I  S  C  N  C  C  D  E  V  L  S  I  S  S  F  K  K  H  A  G  F  K  H  N  R  P  C  L  N  L  F  M  E  N  G  K  P  F  T  L  C  Q  L  E  A  W  S  D  E  Y  K  A  R  R  A  V  S  Q  T  S  Q  A  E  E  R  D  Q  N  D  D  S  C  G  R  C  G  D  G  G  E  L  I  C  C  D  N  C  P  A  T  F  H  L  A  C  L  F  T  Q  :  E  L  P  E  G  S  W  Y  C  S  Q  C  T  C  Q  K  C  G  D  V  V  R  C  S  E  S  S  S  P  G  G  Y  K </second_frame>
            <third_frame>   V  E  F  M  K  *  L  Q  A  N  K  T  L  G  Q  R  N  V  R  N  A  V  L  V  T  M  I  S  *  F  Q  P  Y  L  E  T  R  H  A  N  L  A  T  K  G  P  L  V  K  S  N  L  *  G  K  G  R  T  R  K  V  V  V  S  C  F  Y  V  V  L  L  R  V  E  N  T  S  P  K  K  N  G  L  P  L  P  Q  G  L  C  Y  P  G  *  F  I  L  G  L  S  P  *  M  K  *  S  S  T  R  T  *  R  M  I  L  W  *  K  P  A  I  L  P  L  M  E  Y  R  V  I  A  V  T  R  S  Y  P  S  L  A  S  K  S  M  P  V  L  S  T  I  A  P  V  *  I  F  S  W  R  M  V  S  H  S  P  Y  V  S  L  R  L  G  Q  M  N  T  R  H  G  G  Q  F  L  K  L  P  K  L  R  K  G  T  K  M  M  T  V  A  G  D  V  V  M  E  A  N  *  F  A  V  T  I  V  Q  L  H  F  I  *  L  V  C  S  H  R :   S  F  L  K  G  V  G  T  V  H  N  A  R  A  R  N  V  G  T  W  L  D  V  V  N  Q  V  L  L  V  D  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64967" stop="65641"/>
                    <exon start="66498" stop="66596"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGVHEVITSKQNSGPKKRKKCRLSDDDLLISAVFRNTTCKSGNKRSSGKIKPLRKRKNQKSGGKLLLRSLIKGGKHFPEEKWPTFASRTVLSWLIHSGVVSLNEMIQYQNLKDDSVVKTGYITADGISCNCCDEVLSISSFKKHAGFKHNRPCLNLFMENGKPFTLCQLEAWSDEYKARRAVSQTSQAEERDQNDDSCGRCGDGGELICCDNCPATFHLACLFTQELPEGSWYCSQCTCQKCGDVVRCSESSSPGGYK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="70262" PGL_stop="71266"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70262" e_stop="71266"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="70262" e_stop="71266" e_length="1005"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70262" stop="70971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70963" stop="71266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325871" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGCTTCTTCCTTTTATATATCACGAGATCCCCATCTCTGTTCCTCTCTTTCTTTTCCCCCATTTTTTCCCCTCTTTTACATGTCTTCTTCATACGATTTCTTTCAATTGTTGAGGTTCAGTTCATTATACTGAAACAATCGGTTTTCTGGGAGCTATTCAACTTCACATTTTTTTTCCGGCCAAAGAACTGAAAGGGGTTTCGGAAATGTCGGAATCTGGGAGACCCATGTCGGAAATAGGACTTGATGGGGTAACTGATCGATTGAAGAACTCATTGACTTGCGCGGAAGATGGAAATGGAGTTGAAATTAACAAGCCCGATTTTCGAGAACTCGATCTGGGTTCACCTGTTTCTCCATTACGGAATCGACCGCGTGGATTCACCGCTACTACTACTACTACGACGACGACGACTACGACTACTACAACAACTACTAGTAGCAGTTCTAATTCATCTGGATCTGGATCGGTATCGGGTCGGAATGGATCTCATTTGGGTCGGAAAAAGTCCGAATCCAGTCACTCCGGTGAGCTTTCAAGTTCAGTGGAGAGCTCACCGAAGGCGCGTGGGTTTAAGCCAGGTCACGCGCGGTCTTATTCCAGTGGTGGCATTGCTGTAAATTCACCTCCGTTAAATGTGCTTCCCACCGGGAACATCTGTCCGTCCGGGAAGATTTTGAAGACCGGCATGGCTAGTAAGTCATCGAAGACTGACGTTTTAGGTTCTGGAACGGGTTATTACGGTCACGGAAGTATAATGCGTGGAGGTACCGGTGTAAAACCTGGTGGCGGTGCTGTCGGTGGGGTTGACGCCGGTGCTACACAGACGGCGAATTTGAGAGGGGTAATGGCTGGAGACACAATGAAAAGAGGAATGTTGAATACTGATCCAGAGGAGTTGAAGAGATTAGGAAATGAGAATTACAAAAAGGGTTATTTCGTTGAAGCTTTAAATCTGTATGATAAAGCTATAGCTATTTCTCCAGGCAATGCTGCTTACCA</gDNA_template>
            <first_frame> F  A  S  S  F  Y  I  S  R  D  P  H  L  C  S  S  L  S  F  P  P  F  F  P  L  F  Y  M  S  S  S  Y  D  F  F  Q  L  L  R  F  S  S  L  Y  *  N  N  R  F  S  G  S  Y  S  T  S  H  F  F  S  G  Q  R  T  E  R  G  F  G  N  V  G  I  W  E  T  H  V  G  N  R  T  *  W  G  N  *  S  I  E  E  L  I  D  L  R  G  R  W  K  W  S  *  N  *  Q  A  R  F  S  R  T  R  S  G  F  T  C  F  S  I  T  E  S  T  A  W  I  H  R  Y  Y  Y  Y  Y  D  D  D  D  Y  D  Y  Y  N  N  Y  *  *  Q  F  *  F  I  W  I  W  I  G  I  G  S  E  W  I  S  F  G  S  E  K  V  R  I  Q  S  L  R  *  A  F  K  F  S  G  E  L  T  E  G  A  W  V  *  A  R  S  R  A  V  L  F  Q  W  W  H  C  C  K  F  T  S  V  K  C  A  S  H  R  E  H  L  S  V  R  E  D  F  E  D  R  H  G  *  *  V  I  E  D  *  R  F  R  F  W  N  G  L  L  R  S  R  K  Y  N  A  W  R  Y  R  C  K  T  W  W  R  C  C  R  W  G  *  R  R  C  Y  T  D  G  E  F  E  R  G  N  G  W  R  H  N  E  K  R  N  V  E  Y  *  S  R  G  V  E  E  I  R  K  *  E  L  Q  K  G  L  F  R  *  S  F  K  S  V  *  *  S  Y  S  Y  F  S  R  Q  C  C  L  P </first_frame>
            <second_frame>  L  L  L  P  F  I  Y  H  E  I  P  I  S  V  P  L  F  L  F  P  H  F  F  P  S  F  T  C  L  L  H  T  I  S  F  N  C  *  G  S  V  H  Y  T  E  T  I  G  F  L  G  A  I  Q  L  H  I  F  F  P  A  K  E  L  K  G  V  S  E  M  S  E  S  G  R  P  M  S  E  I  G  L  D  G  V  T  D  R  L  K  N  S  L  T  C  A  E  D  G  N  G  V  E  I  N  K  P  D  F  R  E  L  D  L  G  S  P  V  S  P  L  R  N  R  P  R  G  F  T  A  T  T  T  T  T  T  T  T  T  T  T  T  T  T  T  T  S  S  S  S  N  S  S  G  S  G  S  V  S  G  R  N  G  S  H  L  G  R  K  K  S  E  S  S  H  S  G  E  L  S  S  S  V  E  S  S  P  K  A  R  G  F  K  P  G  H  A  R  S  Y  S  S  G  G  I  A  V  N  S  P  P  L  N  V  L  P  T  G  N  I  C  P  S  G  K  I  L  K  T  G  M  A  S  K  S  S  K  T  D  V  L  G  S  G  T  G  Y  Y  G  H  G  S  I  M  R  G  G  T  G  V  K  P  G  G  G  A  V  G  G  V  D  A  G  A  T  Q  T  A  N  L  R  G  V  M  A  G  D  T  M  K  R  G  M  L  N  T  D  P  E  E  L  K  R  L  G  N  E  N  Y  K  K  G  Y  F  V  E  A  L  N  L  Y  D  K  A  I  A  I  S  P  G  N  A  A  Y   </second_frame>
            <third_frame>   C  F  F  L  L  Y  I  T  R  S  P  S  L  F  L  S  F  F  S  P  I  F  S  P  L  L  H  V  F  F  I  R  F  L  S  I  V  E  V  Q  F  I  I  L  K  Q  S  V  F  W  E  L  F  N  F  T  F  F  F  R  P  K  N  *  K  G  F  R  K  C  R  N  L  G  D  P  C  R  K  *  D  L  M  G  *  L  I  D  *  R  T  H  *  L  A  R  K  M  E  M  E  L  K  L  T  S  P  I  F  E  N  S  I  W  V  H  L  F  L  H  Y  G  I  D  R  V  D  S  P  L  L  L  L  L  R  R  R  R  L  R  L  L  Q  Q  L  L  V  A  V  L  I  H  L  D  L  D  R  Y  R  V  G  M  D  L  I  W  V  G  K  S  P  N  P  V  T  P  V  S  F  Q  V  Q  W  R  A  H  R  R  R  V  G  L  S  Q  V  T  R  G  L  I  P  V  V  A  L  L  *  I  H  L  R  *  M  C  F  P  P  G  T  S  V  R  P  G  R  F  *  R  P  A  W  L  V  S  H  R  R  L  T  F  *  V  L  E  R  V  I  T  V  T  E  V  *  C  V  E  V  P  V  *  N  L  V  A  V  L  S  V  G  L  T  P  V  L  H  R  R  R  I  *  E  G  *  W  L  E  T  Q  *  K  E  E  C  *  I  L  I  Q  R  S  *  R  D  *  E  M  R  I  T  K  R  V  I  S  L  K  L  *  I  C  M  I  K  L  *  L  F  L  Q  A  M  L  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70377" stop="71264"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSVHYTETIGFLGAIQLHIFFPAKELKGVSEMSESGRPMSEIGLDGVTDRLKNSLTCAEDGNGVEINKPDFRELDLGSPVSPLRNRPRGFTATTTTTTTTTTTTTTTTSSSSNSSGSGSVSGRNGSHLGRKKSESSHSGELSSSVESSPKARGFKPGHARSYSSGGIAVNSPPLNVLPTGNICPSGKILKTGMASKSSKTDVLGSGTGYYGHGSIMRGGTGVKPGGGAVGGVDAGATQTANLRGVMAGDTMKRGMLNTDPEELKRLGNENYKKGYFVEALNLYDKAIAISPGNAAY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="72435" PGL_stop="74247"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72435" e_stop="72470"/>
            <exon e_start="72561" e_stop="72745"/>
            <exon e_start="72822" e_stop="73155"/>
            <exon e_start="73275" e_stop="73479"/>
            <exon e_start="73567" e_stop="73673"/>
            <exon e_start="73759" e_stop="74247"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.997"/>
          <exon-intron don_prob="0.023" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72435" e_stop="72470" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="72471" i_stop="72560" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72561" e_stop="72745" e_length="185"/>
          </exon>
          <intron i_serial="2" don_prob="0.431" acc_prob="0.981">
            <gDNA_intron_boundary i_start="72746" i_stop="72821" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="72822" e_stop="73155" e_length="334"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="73156" i_stop="73274" i_length="119"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73275" e_stop="73479" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.023" acc_prob="0.987">
            <gDNA_intron_boundary i_start="73480" i_stop="73566" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="73567" e_stop="73673" e_length="107"/>
          </exon>
          <intron i_serial="5" don_prob="0.928" acc_prob="1.000">
            <gDNA_intron_boundary i_start="73674" i_stop="73758" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73759" e_stop="74247" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72435" stop="72470"/>
              <exon start="72561" stop="72745"/>
              <exon start="72822" stop="73155"/>
              <exon start="73275" stop="73479"/>
              <exon start="73567" stop="73657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73453" stop="73479"/>
              <exon start="73567" stop="73673"/>
              <exon start="73759" stop="74204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73464" stop="73479"/>
              <exon start="73567" stop="73673"/>
              <exon start="73759" stop="74206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611199" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73473" stop="73479"/>
              <exon start="73567" stop="73673"/>
              <exon start="73759" stop="73839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73796" stop="74247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73796" stop="74121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73807" stop="74201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAGCCATTGCTTCTGGAGCAGATGCGTCTCCTCAG : TTATTTGCTTGTAGAGCAGAAGCTCTTTTGAAGCTACATCAAGTAGAGGATGCAGAGTTGAGCTTATCAATTACTCGGAAGCATGAACCATCTACTGGTGGATCACCAGAGTCAAAAATTTTTGGGATGCTTTCAGAGGCATATGTGTTCTTTGTTCAAGCTCAGATTGACCTGGCTATGGGAAG : GTTTGAAAGTGCAATCAGTTCAGTAGAGAGAGCTGGACATATTGATCCTCGAAATATTGAAGTATCAGTTTTTCTCAACAATACAAGGTCGGTGGGACGGGCTCGTACCCGTGGCAATGATCTATTTAAATCCGAAAGGTATACTGAAGCATGTGCTGCTTATGGGGAAGGTCTCAGGCGTGATTCGTCAAATTCAGTTCTCTATTGTAATAGAGCAGCTTGCTGGTATAAACTCGGGCAGTGGGAAAAAGCTGTGGATGACTGCAATCGAGCGCTCACTTTCCAGCCACACTACACTAAAGCCCTTCTTCGAAGGGCTGCCTCAAATACCAAG : CTTGAGAGATGGGCTGAAGCTGTTAGAGATTATGAGGTTTTGAGGAAAGCGCTTCCATATGACACCGAGGTTGCTGAATCGTTATTCCATGCTCAAGTTGCATTAAAGAAATCACGCGGAGAAGACATTCACAATATGAAATTTGGTGGGGAGGTGGAATTAGTTTCTGGTCTCGAGCAGTTTCAAGCTGCGATTTCATCGCCTT : GTGCATCTGTGGTCCATTTCAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTGGATACTTTAACCACCAAGTATCCTTCCATAAATTTTCTTAAG : GTTGATGTGGAAGAGAGCCCGTCAATTGCTAATGCAGAGAATGTTAGAATCGTACCAACATTCAAGATTTACAAAAAGGGAAGCCGCGTGAAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATTTAAGTGCCATGATTGCAATGTCATCGTGCTTCTTCGTGTTCTCTCATCATTCCAATCACCCGGTATTCTTGCCGTTTACCTATGACAAAATTGAGCTACTACTACTACTACATAATAACAATCTCATTAAGGAGCCAATGCAGCCAAATGCCAGCAACCTTCAGAGGGATTAGTTTAGTCTCCTTTTTTCCCTTTTAATTTTATTCATTCATTGCTGTCTTGGTTCCTACTTCTTCCCACCTCCACATTAATCTTTCTCTTTTCATATCACTTATTCTTATTATATGAAAAAAAAAAATTAAAAAAATTAGGTTACATTTCCCTAGTATAAAACTTGAG</gDNA_template>
            <first_frame> A  A  I  A  S  G  A  D  A  S  P  Q  :  L  F  A  C  R  A  E  A  L  L  K  L  H  Q  V  E  D  A  E  L  S  L  S  I  T  R  K  H  E  P  S  T  G  G  S  P  E  S  K  I  F  G  M  L  S  E  A  Y  V  F  F  V  Q  A  Q  I  D  L  A  M  G  R :   F  E  S  A  I  S  S  V  E  R  A  G  H  I  D  P  R  N  I  E  V  S  V  F  L  N  N  T  R  S  V  G  R  A  R  T  R  G  N  D  L  F  K  S  E  R  Y  T  E  A  C  A  A  Y  G  E  G  L  R  R  D  S  S  N  S  V  L  Y  C  N  R  A  A  C  W  Y  K  L  G  Q  W  E  K  A  V  D  D  C  N  R  A  L  T  F  Q  P  H  Y  T  K  A  L  L  R  R  A  A  S  N  T  K  :  L  E  R  W  A  E  A  V  R  D  Y  E  V  L  R  K  A  L  P  Y  D  T  E  V  A  E  S  L  F  H  A  Q  V  A  L  K  K  S  R  G  E  D  I  H  N  M  K  F  G  G  E  V  E  L  V  S  G  L  E  Q  F  Q  A  A  I  S  S  P   : C  A  S  V  V  H  F  K  A  A  S  N  L  Q  C  K  Q  I  S  P  F  L  D  T  L  T  T  K  Y  P  S  I  N  F  L  K  :  V  D  V  E  E  S  P  S  I  A  N  A  E  N  V  R  I  V  P  T  F  K  I  Y  K  K  G  S  R  V  K  E  M  I  C  P  S  Q  E  V  L  E  S  S  V  R  H  Y  S  I  *  V  P  *  L  Q  C  H  R  A  S  S  C  S  L  I  I  P  I  T  R  Y  S  C  R  L  P  M  T  K  L  S  Y  Y  Y  Y  Y  I  I  T  I  S  L  R  S  Q  C  S  Q  M  P  A  T  F  R  G  I  S  L  V  S  F  F  P  F  *  F  Y  S  F  I  A  V  L  V  P  T  S  S  H  L  H  I  N  L  S  L  F  I  S  L  I  L  I  I  *  K  K  K  I  K  K  I  R  L  H  F  P  S  I  K  L  E </first_frame>
            <second_frame>  Q  P  L  L  L  E  Q  M  R  L  L  S :   Y  L  L  V  E  Q  K  L  F  *  S  Y  I  K  *  R  M  Q  S  *  A  Y  Q  L  L  G  S  M  N  H  L  L  V  D  H  Q  S  Q  K  F  L  G  C  F  Q  R  H  M  C  S  L  F  K  L  R  L  T  W  L  W  E   : G  L  K  V  Q  S  V  Q  *  R  E  L  D  I  L  I  L  E  I  L  K  Y  Q  F  F  S  T  I  Q  G  R  W  D  G  L  V  P  V  A  M  I  Y  L  N  P  K  G  I  L  K  H  V  L  L  M  G  K  V  S  G  V  I  R  Q  I  Q  F  S  I  V  I  E  Q  L  A  G  I  N  S  G  S  G  K  K  L  W  M  T  A  I  E  R  S  L  S  S  H  T  T  L  K  P  F  F  E  G  L  P  Q  I  P  S :   L  R  D  G  L  K  L  L  E  I  M  R  F  *  G  K  R  F  H  M  T  P  R  L  L  N  R  Y  S  M  L  K  L  H  *  R  N  H  A  E  K  T  F  T  I  *  N  L  V  G  R  W  N  *  F  L  V  S  S  S  F  K  L  R  F  H  R  L  :  V  H  L  W  S  I  S  K  Q  H  L  T  Y  N  A  S  R  Y  P  L  S  W  I  L  *  P  P  S  I  L  P  *  I  F  L  R :   L  M  W  K  R  A  R  Q  L  L  M  Q  R  M  L  E  S  Y  Q  H  S  R  F  T  K  R  E  A  A  *  R  R  *  S  A  Q  V  K  R  C  *  N  H  R  *  G  I  T  V  F  K  C  H  D  C  N  V  I  V  L  L  R  V  L  S  S  F  Q  S  P  G  I  L  A  V  Y  L  *  Q  N  *  A  T  T  T  T  T  *  *  Q  S  H  *  G  A  N  A  A  K  C  Q  Q  P  S  E  G  L  V  *  S  P  F  F  P  F  N  F  I  H  S  L  L  S  W  F  L  L  L  P  T  S  T  L  I  F  L  F  S  Y  H  L  F  L  L  Y  E  K  K  K  L  K  K  L  G  Y  I  S  L  V  *  N  L   </second_frame>
            <third_frame>   S  H  C  F  W  S  R  C  V  S  S   : V  I  C  L  *  S  R  S  S  F  E  A  T  S  S  R  G  C  R  V  E  L  I  N  Y  S  E  A  *  T  I  Y  W  W  I  T  R  V  K  N  F  W  D  A  F  R  G  I  C  V  L  C  S  S  S  D  *  P  G  Y  G  K  :  V  *  K  C  N  Q  F  S  R  E  S  W  T  Y  *  S  S  K  Y  *  S  I  S  F  S  Q  Q  Y  K  V  G  G  T  G  S  Y  P  W  Q  *  S  I  *  I  R  K  V  Y  *  S  M  C  C  L  W  G  R  S  Q  A  *  F  V  K  F  S  S  L  L  *  *  S  S  L  L  V  *  T  R  A  V  G  K  S  C  G  *  L  Q  S  S  A  H  F  P  A  T  L  H  *  S  P  S  S  K  G  C  L  K  Y  Q   : A  *  E  M  G  *  S  C  *  R  L  *  G  F  E  E  S  A  S  I  *  H  R  G  C  *  I  V  I  P  C  S  S  C  I  K  E  I  T  R  R  R  H  S  Q  Y  E  I  W  W  G  G  G  I  S  F  W  S  R  A  V  S  S  C  D  F  I  A  L :   C  I  C  G  P  F  Q  S  S  I  *  P  T  M  Q  A  D  I  P  F  L  G  Y  F  N  H  Q  V  S  F  H  K  F  S  *   : G  *  C  G  R  E  P  V  N  C  *  C  R  E  C  *  N  R  T  N  I  Q  D  L  Q  K  G  K  P  R  E  G  D  D  L  P  K  S  R  G  V  R  I  I  G  E  A  L  Q  Y  L  S  A  M  I  A  M  S  S  C  F  F  V  F  S  H  H  S  N  H  P  V  F  L  P  F  T  Y  D  K  I  E  L  L  L  L  L  H  N  N  N  L  I  K  E  P  M  Q  P  N  A  S  N  L  Q  R  D  *  F  S  L  L  F  S  L  L  I  L  F  I  H  C  C  L  G  S  Y  F  F  P  P  P  H  *  S  F  S  F  H  I  T  Y  S  Y  Y  M  K  K  K  N  *  K  N  *  V  T  F  P  *  Y  K  T  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72435" stop="72470"/>
                    <exon start="72561" stop="72745"/>
                    <exon start="72822" stop="73155"/>
                    <exon start="73275" stop="73479"/>
                    <exon start="73567" stop="73673"/>
                    <exon start="73759" stop="73911"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1017</number_coding_nucleotides>
                  <number_encoded_amino_acids>339</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAIASGADASPQLFACRAEALLKLHQVEDAELSLSITRKHEPSTGGSPESKIFGMLSEAYVFFVQAQIDLAMGRFESAISSVERAGHIDPRNIEVSVFLNNTRSVGRARTRGNDLFKSERYTEACAAYGEGLRRDSSNSVLYCNRAACWYKLGQWEKAVDDCNRALTFQPHYTKALLRRAASNTKLERWAEAVRDYEVLRKALPYDTEVAESLFHAQVALKKSRGEDIHNMKFGGEVELVSGLEQFQAAISSPCASVVHFKAASNLQCKQISPFLDTLTTKYPSINFLKVDVEESPSIANAENVRIVPTFKIYKKGSRVKEMICPSQEVLESSVRHYSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="80381" PGL_stop="79712"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80381" e_stop="80307"/>
            <exon e_start="80172" e_stop="80075"/>
            <exon e_start="79945" e_stop="79712"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.925" e_score="0.947"/>
          <exon-intron don_prob="0.942" acc_prob="0.983" e_score="0.990"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="80381" e_stop="80307" e_length="75"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.925">
            <gDNA_intron_boundary i_start="80306" i_stop="80173" i_length="134"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="80172" e_stop="80075" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.942" acc_prob="0.983">
            <gDNA_intron_boundary i_start="80074" i_stop="79946" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="79945" e_stop="79712" e_length="234"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80381" stop="80307"/>
              <exon start="80172" stop="80075"/>
              <exon start="79945" stop="79736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80381" stop="80307"/>
              <exon start="80172" stop="80075"/>
              <exon start="79945" stop="79827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80139" stop="80075"/>
              <exon start="79945" stop="79736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80117" stop="80075"/>
              <exon start="79945" stop="79712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222801" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80117" stop="80075"/>
              <exon start="79945" stop="79712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222211" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTAAGGATATGCCTTGATATTCTCAAAGACAAATGGAGTCCTGCTCTTCAGATCCGTACTGTACTTTTGAG : CATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAAAACATTGCTAAGCACTGGAAGTCAAATGAGGTTGAAGCTGTTGAAACGG : CTAAGGAGTGGACACGCCTATATGCTAGTGGTGCATGAAGATATAGCAACGAAATGTTCAAAATAACAAAAATCATGGAATGTAATCAATATTGACTGGCTTATCAATATGAACCTGGATAGCACCCTCCAAATTTGTATAATTGAATGTGACAACCCTTTAGTTTTTTAATGTTCAGGAATGAACTTTGTTACAACAAAACTGGAAATGGTAAGGATTTTGTCACTGCAAAGA</gDNA_template>
            <first_frame> K  L  K  D  M  P  *  Y  S  Q  R  Q  M  E  S  C  S  S  D  P  Y  C  T  F  E  :  H  S  S  T  F  E  C  S  K  S  R  *  S  T  L  *  K  H  C  *  A  L  E  V  K  *  G  *  S  C  *  N  G :   *  G  V  D  T  P  I  C  *  W  C  M  K  I  *  Q  R  N  V  Q  N  N  K  N  H  G  M  *  S  I  L  T  G  L  S  I  *  T  W  I  A  P  S  K  F  V  *  L  N  V  T  T  L  *  F  F  N  V  Q  E  *  T  L  L  Q  Q  N  W  K  W  *  G  F  C  H  C  K   </first_frame>
            <second_frame>  S  L  R  I  C  L  D  I  L  K  D  K  W  S  P  A  L  Q  I  R  T  V  L  L  S :   I  Q  A  L  L  S  A  P  N  P  D  D  P  L  S  E  N  I  A  K  H  W  K  S  N  E  V  E  A  V  E  T   : A  K  E  W  T  R  L  Y  A  S  G  A  *  R  Y  S  N  E  M  F  K  I  T  K  I  M  E  C  N  Q  Y  *  L  A  Y  Q  Y  E  P  G  *  H  P  P  N  L  Y  N  *  M  *  Q  P  F  S  F  L  M  F  R  N  E  L  C  Y  N  K  T  G  N  G  K  D  F  V  T  A  K  </second_frame>
            <third_frame>   A  *  G  Y  A  L  I  F  S  K  T  N  G  V  L  L  F  R  S  V  L  Y  F  *   : A  F  K  H  F  *  V  L  Q  I  Q  M  I  H  S  L  K  T  L  L  S  T  G  S  Q  M  R  L  K  L  L  K  R  :  L  R  S  G  H  A  Y  M  L  V  V  H  E  D  I  A  T  K  C  S  K  *  Q  K  S  W  N  V  I  N  I  D  W  L  I  N  M  N  L  D  S  T  L  Q  I  C  I  I  E  C  D  N  P  L  V  F  *  C  S  G  M  N  F  V  T  T  K  L  E  M  V  R  I  L  S  L  Q  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0308M01.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80380" stop="80307"/>
                    <exon start="80172" stop="80075"/>
                    <exon start="79945" stop="79908"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEVEAVETAKEWTRLYASGA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="79735" PGL_stop="79947"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79735" e_stop="79947"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="79735" e_stop="79947" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79735" stop="79947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218866" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCATTTCCAGTTTTGTTGTAACAAAGTTCATTCCTGAACATTAAAAAACTAAAGGGTTGTCACATTCAATTATACAAATTTGGAGGGTGCTATCCAGGTTCATATTGATAAGCCAGTCAATATTGATTACATTCCATGATTTTTGTTATTTTGAACATTTCGTTGCTATATCTTCATGCACCACTAGCATATAGGCGTGTCCACTCCTTAGCT</gDNA_template>
            <first_frame> P  F  P  V  L  L  *  Q  S  S  F  L  N  I  K  K  L  K  G  C  H  I  Q  L  Y  K  F  G  G  C  Y  P  G  S  Y  *  *  A  S  Q  Y  *  L  H  S  M  I  F  V  I  L  N  I  S  L  L  Y  L  H  A  P  L  A  Y  R  R  V  H  S  L  A </first_frame>
            <second_frame>  H  F  Q  F  C  C  N  K  V  H  S  *  T  L  K  N  *  R  V  V  T  F  N  Y  T  N  L  E  G  A  I  Q  V  H  I  D  K  P  V  N  I  D  Y  I  P  *  F  L  L  F  *  T  F  R  C  Y  I  F  M  H  H  *  H  I  G  V  S  T  P  *   </second_frame>
            <third_frame>   I  S  S  F  V  V  T  K  F  I  P  E  H  *  K  T  K  G  L  S  H  S  I  I  Q  I  W  R  V  L  S  R  F  I  L  I  S  Q  S  I  L  I  T  F  H  D  F  C  Y  F  E  H  F  V  A  I  S  S  C  T  T  S  I  *  A  C  P  L  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0308M01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 269 chains have been computed
$ 
$ memory statistics:
$ 476016 bytes spliced alignments in total
$ 226 spliced alignments have been stored
$ 2106 bytes was the average size of a spliced alignment
$ 30024 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1876 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 313 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-07 04:56:37
-->
