<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-13 10:01:28"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U331967" ref_strand="+" ref_description="SGN-U331967        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT1G56140.1 | Symbol: None | leucine-rich repeat family protein / protein kinase family protein, contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain | chr1:21005239-21011474 REVERSE | Aliases: T6H22.26, T6H22_26 (evalue: 2e-121, score=432) genbank/nr: gi|18405700|ref|NP_564709.1| receptor-related protein kinase -related [Arabidopsis thaliana](evalue: 2e-119, score=432)">
      <seq>tgttgctgttaaacaactgtctgtggcatcacaccaaggaaagagtcagtttgtggccgagattgctactatatcagctgtacaacaccgtaatcttgtgaagctctatggttgctgcatcgagggagacaggcgattacttgtttatgagtaccttgaaaacaagagtcttgatcaagcattatttgagaaaggatctctatatcttgattggccaacacgcttccagatatgcttgggagtagcaaagggtctggcgtatcttcatgaggaatctcgagtccgtattgtccatcgagatgtcaaggccagtaatatcctgcttgatgcagatctaaacccaaaaatttcagactttggattggcaaaactttatgatgacaaacagacgcatataaacactcgtgttgctggcacaatagggtatcttgcaccagaatatgccatgcgcggacatctgacagagaaggctgatgtgtttgggtttggagttgtagctctagaaattgtcagtggtagaacaaattctgatgagagcttggaagaagacaagatctaccttcttgagtgggcttggcagcttcatgagaacaagcgcgaaactgagctagtggatgcaaatttatctgaatttgatgtagaagaagtgaaaaaagtaatagggatagctctactatgcactcaaacatccccaggattacgaccctcaatgtcccgtgcaatagcaatgcttacaggagacgctgaggttgcggctgtgacttcgagacctggatacctgactgactggaaattcaaagatacaacccccttcatgagtgatcatttttcgcaaatgccagattcatcagtgggttcaagtagagccccaactacaaattattcaccatcaggtcaggacacaccaatgctcagtgacatcattggagagggtagatgaagtcttttgcatttttcagtcagagataaacttttccctttttgtttgcatgtattataaccatttgtgtataggttagattctttctgcatgtatattattatacccataggtaatggttgagagattgctatgccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="7921" stop="9977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8221" g_stop="8408" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8409" i_stop="8525" i_length="117">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.022" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8526" g_stop="8757" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="420" r_length="232" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8758" i_stop="8846" i_length="89">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8847" g_stop="8997" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="571" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8998" i_stop="9213" i_length="216">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9214" g_stop="9674" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="1034" r_length="463" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1078" polyA_stop="1097"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U331967" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>1032</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8221" e_stop="8408"/>
          <exon e_start="8526" e_stop="8757"/>
          <exon e_start="8847" e_stop="8997"/>
          <exon e_start="9214" e_stop="9674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGCTGTTAAACAACTGTCTGTGGCATCACACCAAGGAAAGAGTCAGTTTGTGGCCGAGATTGCTACTATATCAGCTGTACAACACCGTAATCTTGTGAAGCTCTATGGTTGCTGCATCGAGGGAGACAGGCGATTACTTGTTTATGAGTACCTTGAAAACAAGAGTCTTGATCAAGCATTATTTGGTACTAATGAAATACAATATCTTGGAATTTCTGCCTTTCCTCATATAAGAGATGAAAAAAATTAAACTTGCTGATATTTATACAATGATTATTGAGATTATAGCTTCAATTGCGCAGAGAAAGGATCTCTATATCTTGATTGGCCAACACGCTTCCAGATATGCTTGGGAGTAGCAAAGGGTCTAGCGTATCTTCATGAGGAATCTCGAGTCCGTATTGTCCATCGAGATGTGAAGGCCAGTAATATCCTGCTTGATGCAGATCTAAACCCAAAAATTTCAGACTTTGGATTGGCAAAACTTTATGATGACAAACAGACGCATATAAACACTCGTGTTGCTGGCACAATGTAAGATCCTGAAAATGGAAAATGTGTCATATTCTTAGACTCCTTTTCTTCTATAGTTTGGTTTCATTCTCATTAGCATTTTCTTGTAGAGGGTATCTTGCACCAGAATATGCCATGCGCGGACATCTGACAGAGAAGGCTGATGTGTTTGGCTTTGGAGTTGTAGCTCTAGAAATTGTCAGTGGTAGAACAAATTCTGATGAGAGCTTGGAAGAAGACAAGATCTACCTTCTTGAGTGGGTAAAGTCCTTTCCTTCTTTGCTTTTAGTAAAGTATTAGAACAATGTGCTTTCATTGCTGCTCCAAGTGCTTATCAGGAATGATATACCACTTGGATTAACGAAATGGAAGAATATCTTCCTTTGCAATTTCTATTTCTTTTTTAATCTTGAAGGATGCTCTACTGTGGTTCCTACATTTATTGTTTAGATCTAACCATATTCATTGCTCTTCTAGGCTTGGCAGCTTCATGAGAACAAGCGCGAAACTGAGCTAGTGGATGCAAATTTATCTGAATTTGATGTAGAAGAAGTGAAAAAAGTAATAGGGATAGCTCTACTATGCACTCAAACATCCCCAGGATTACGACCCTCAATGTCCCGTGCAATAGCAATGCTTACAGGAGATGCTGAGGTTGCGGCTGTGACTTCGAGACCTGGATACCTGACTGACTGGAAATTCAAAGATACAACAACCTTCATGAGTGGTCATTCTTCGCAAATGCCAGATTTATCAGTGGGTACAAGTAGAGCCCCAACTACAGGTTATTCACCATCAGGTCAGGACACACCAATGCTCAGTGACATCATTGGAGAGGGTAGATGAAATC--TTGCATTTTTCAGTCAGAGATAAACTTTTACCCTTTTGTTTGCATGTATTATAACCATTTGTGTATAGCTTAGATTCTTTCTGCATGT</genome_strand>
        <mrna_strand>TGTTGCTGTTAAACAACTGTCTGTGGCATCACACCAAGGAAAGAGTCAGTTTGTGGCCGAGATTGCTACTATATCAGCTGTACAACACCGTAATCTTGTGAAGCTCTATGGTTGCTGCATCGAGGGAGACAGGCGATTACTTGTTTATGAGTACCTTGAAAACAAGAGTCTTGATCAAGCATTATTTG.....................................................................................................................AGAAAGGATCTCTATATCTTGATTGGCCAACACGCTTCCAGATATGCTTGGGAGTAGCAAAGGGTCTGGCGTATCTTCATGAGGAATCTCGAGTCCGTATTGTCCATCGAGATGTCAAGGCCAGTAATATCCTGCTTGATGCAGATCTAAACCCAAAAATTTCAGACTTTGGATTGGCAAAACTTTATGATGACAAACAGACGCATATAAACACTCGTGTTGCTGGCACAAT.........................................................................................AGGGTATCTTGCACCAGAATATGCCATGCGCGGACATCTGACAGAGAAGGCTGATGTGTTTGGGTTTGGAGTTGTAGCTCTAGAAATTGTCAGTGGTAGAACAAATTCTGATGAGAGCTTGGAAGAAGACAAGATCTACCTTCTTGAGTGG........................................................................................................................................................................................................................GCTTGGCAGCTTCATGAGAACAAGCGCGAAACTGAGCTAGTGGATGCAAATTTATCTGAATTTGATGTAGAAGAAGTGAAAAAAGTAATAGGGATAGCTCTACTATGCACTCAAACATCCCCAGGATTACGACCCTCAATGTCCCGTGCAATAGCAATGCTTACAGGAGACGCTGAGGTTGCGGCTGTGACTTCGAGACCTGGATACCTGACTGACTGGAAATTCAAAGATACAACCCCCTTCATGAGTGATCATTTTTCGCAAATGCCAGATTCATCAGTGGGTTCAAGTAGAGCCCCAACTACAAATTATTCACCATCAGGTCAGGACACACCAATGCTCAGTGACATCATTGGAGAGGGTAGATGAAGTCTTTTGCATTTTTCAGTCAGAGATAAACTTTTCCCTTTTTGTTTGCATGTATTATAACCATTTGTGTATAGGTTAGATTCTTTCTGCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U342406" ref_strand="+" ref_description="SGN-U342406        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:4094424-4095044 REVERSE | Aliases: MJM20.1(evalue: 2e-73, score=272) genbank/nr: gi|15230623|ref|NP_187893.1| hypothetical protein [Arabidopsis thaliana] gi|6997162|gb|AAF34826.1| hypothetical protein [Arabidopsis thaliana] gi|9279771|dbj|BAB01416.1| gb|AAF34826.1~gene_id:MJM20.1~similar to unknown protein [Arabidopsis thaliana](evalue: 2e-71, score=272)">
      <seq>aacagttcaatcatggaatccaagccctcacacccacttcaccaaattgcagaaaccccaactcacaagttgcttctcaaacaatggctgaaagaagaagaactcatcctcaacagaatcgctaccaaagaaacccaaatcgattccgtccgcaatgaaatcactcagctctactgcattttcttcctgttccattcgatttcccttatgcttttattcagtgcttcctccaaatgggcctcgagaactgggctctgccaccgttcatggatcccgtcaatctgttctctcctctgttctatgggtattatttgggctgttaggtacaagacggatacagagagtcacttagagaaactgttggagagagagaaagaggatgggaaattactggcaaagtgtgtggaggagctgaagagaaaaggggtggaatttgatttgttgaaggaagttgatgctcttaggagggctaagagcttgagggttgaagctaaggtggttcgaaaatggtcagctagagactttgtgtctctgtttttcttctctgttacttgcctggtactcgctttaaccaggaccattttgtgtaattgatacttactacaactgaatcggaaaattaattgtggggaagttactcttctgctttttatattttaatttgattcttatttggcaatgaatttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="10773" stop="9482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10473" g_stop="9776" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U342406" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10473" e_stop="9776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGTTCAATCATGGAATCCAAGCCCTCACACCCACTTCACCAAATTGCAGAAACCCCAACTCACAAGTTGCTTCTCAAACAATGGCTGAAAGAAGAAGAACTCATCCTCAACAGAATCGCTACCAAAGAAACCCAAATCGATTCCGTCCGCAATGAAATCACTCAGCTCTACTGCATTTTCTTCCTGTTCCATTCGATTTCCCTTATGCTTTTATTCAGTGCTTCCTCCAAATGGGCCTCGAGAACTGGGCTCTGCCACCGTTCATGGATCCCGTCAATCTGTTCTCTCCTCTGTTCTATGGGTATTATTTGGGCTGTTAGGTACAAGACGGATACAGAGAGTCACTTAGAGAAACTGTTGGAGAGAGAGAAAGAGGATGGGAAATTACTGGCAAAGTGTGTGGAGGAGCTGAAGAGAAAAGGGGTGGAATTTGATTTGTTGAAGGAAGTTGATGCTCTTAGGAGGGCTAAGAGCTTGAGGGTTGAAGCTAAGGTGGTTCGAAAATGGTCAGCTAGAGACTTTGTGTCTCTGTTTTTCTTCTCTGTTACTTGCCTGGTACTCGCTTTAACCAGGACCATTTTGTGTAATTGATACTTACTACAACTGAATCGGAAAATTAATTGTGGGGAAGTTACTCTTCTGCTTTTTATATTTTAATTTGATTCTTATTTGGCAATGAATTTTTAACATTTTGG</genome_strand>
        <mrna_strand>AACAGTTCAATCATGGAATCCAAGCCCTCACACCCACTTCACCAAATTGCAGAAACCCCAACTCACAAGTTGCTTCTCAAACAATGGCTGAAAGAAGAAGAACTCATCCTCAACAGAATCGCTACCAAAGAAACCCAAATCGATTCCGTCCGCAATGAAATCACTCAGCTCTACTGCATTTTCTTCCTGTTCCATTCGATTTCCCTTATGCTTTTATTCAGTGCTTCCTCCAAATGGGCCTCGAGAACTGGGCTCTGCCACCGTTCATGGATCCCGTCAATCTGTTCTCTCCTCTGTTCTATGGGTATTATTTGGGCTGTTAGGTACAAGACGGATACAGAGAGTCACTTAGAGAAACTGTTGGAGAGAGAGAAAGAGGATGGGAAATTACTGGCAAAGTGTGTGGAGGAGCTGAAGAGAAAAGGGGTGGAATTTGATTTGTTGAAGGAAGTTGATGCTCTTAGGAGGGCTAAGAGCTTGAGGGTTGAAGCTAAGGTGGTTCGAAAATGGTCAGCTAGAGACTTTGTGTCTCTGTTTTTCTTCTCTGTTACTTGCCTGGTACTCGCTTTAACCAGGACCATTTTGTGTAATTGATACTTACTACAACTGAATCGGAAAATTAATTGTGGGGAAGTTACTCTTCTGCTTTTTATATTTTAATTTGATTCTTATTTGGCAATGAATTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U337710" ref_strand="+" ref_description="SGN-U337710        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | tetratricopeptide repeat (TPR)-containing protein, contains Pfam profile PF00515 TPR Domain; similar to infertility-related sperm protein (Homo sapiens) GI:10863768, TPR-containing protein involved in spermatogenesis TPIS (Mus musculus) GI:6272680 | chr1:20981360-20983014 REVERSE | Aliases: T6H22.6, T6H22_6(evalue: 4e-27, score=118) genbank/nr: OSJNBa0008M17.15(evalue: 8e-26, score=120)">
      <seq>tcaattcccccaatttttcagattcaagttactgttattcgggtaaatttcttcgaattagggtgcatacaaacatggcctcatcagctgccatcaacaacatcgaaagagctcaccagatgtacagggaaggtagatatgcccaagctctgggtttttataccgatgctctttctttggctaaaacaaactcccaaaagatcgctcttcacagtaatcgtgctgcttgtttcctcaaacttcacgatttcaaaaaggttcttggttttccttgttggttggctctttatatctcaaaatacaaggacttggatgagtagcttaagatcttaactgatttgctcatcatgaagtgaatattgtattggactctagcagaggcgtagccaggattttagtgaagggtgttcgaacttcgaagaggcagcagatgaatgcacattggtgcttgaacttgatcaaaaacacacaggcgcgctgatgttgcgcgctcaaaccttagtcaccctcaaggagtaccattcagcactttttgatgtcaacaggttaattgaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="11299" stop="14685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11599" g_stop="11855" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11856" i_stop="12235" i_length="380">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.057" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12236" g_stop="12401" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="423" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12402" i_stop="14249" i_length="1848">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14250" g_stop="14385" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="559" r_length="136" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U337710" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11599" e_stop="11855"/>
          <exon e_start="12236" e_stop="12401"/>
          <exon e_start="14250" e_stop="14385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTCCCCCAATTTTTCAGATTCAAGTTACTGTTATTCGATTAAATTTCTTCGAATTAGGGTACATACAAACATGGCCTCATCAGCTGCCATCAACAACATCGAAAGAGCTCACCAGATGTACAGGGAAGGTAGATATGCCCAAGCTCTGGGTTTTTATACCGATGCTCTTTCTTTGGCTAAAACAAACTCCCAAAAGATCGCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAGGTTACATCTTTATTTATTGAATTACATCAAACATTTGTTCAATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAACAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGCAAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTGGATTGGATACCCCCATAGATAGCAAATCATTGAATCATCTTTTTTGGTTTTCTAGGTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAGGTAAATACAAAAAAATAAAAGAAGAAAAATCATGAAAGGGCGCAATTTTTTTTAGTGAAGCTACATAATATTTAGCTAAGTCATAAAAGCACTTGTTATGATACTAACAATTGTATAAATTAAATTAACTTAAAAAGAGATGAAGTAAATTCTTCTAGTGAAAGCATAATCCAAATAATTATTCAATCCTACTTGAAAAGATTTCATATCTTGAATTTTTTTAATCGATAAACTTATTAGAAATAATACTAAATCTCTCTTCATTACATTAGGCACTACGAAATCGCCTAAAACATTATCAAATTGTATTTTAAGTGTTGAGTCCCATATCGGTGAGATGAGAAGAATTTGGACTCTTCAAGGTTTTGGGCAATACTTTCATCATGAGCTAGCATTTAGGGTTGAGTTGGGCCTAAGGTCTATTTAACGTGATAGCAGAGCTAGGCCCATTCCAATTTGTGGTTTACCGATGTTGGGTCCCCTTATAACTTGTCCATGCTCCAGGTGTCCAAATCTAAGTGTGAGGTGGGTGTTGAATCCTACATCAGTGGGATGAGGAGAATTTAGACTCTTTATATGGTCTTGAAAAGTTTTCCTTTCATGAGCTAGCTTTTGAAGTTGAGTTAGATCTCGAATAATGAAATAAGAGAGTATGTCTTGTGCTTAGTTTTGTGATGCCTATAAATAATACTCCACCCGTTTCAAATTATATGATATTTTTTGCTTTCCGAGTGTCAAGTTGACTAATCTTTGAAGCTAAGTTGGATTAAATCAACACTATGTTTGAACTCTATGAAAATTACTATAAGTTATGATATTTCTCATGTCAATATGATAAAAATAATACATTTTAAAATATTGGTGAAAATTTACATAGTTTGAATCTTGAATAATGAAAAATACTTCCCCTTTTTTTGATAGCAATAAAATATTTCTCATTGTCTTCTTGTAATAATAACACAAGAACCCGTTAAGAAGAATATTTAATATGAGAGTATATTTTCTCAGCACAAGCAGCAAGAGTTAGTGAACGACTCATCTTATTTGTTCTATTTTACTTTAAAAAAATGTACGCAGATAATAGCTGTAGGAATCGAACCCGTGCCTCTTTAGAAAGTCAGACCAGCCTTGGCCGCTGAGCTATCACTCTCAGTTGTGTCAAGAGTGAATGATTGTATGTTAAAAATGATATTTCAGCTCTACAAACAGTGTTCAGCTGACACCCTTCCAAGGCTGTAGCTCCACCAGTGGATGTTAGTAATTTGTTTTCAATGACCGGGCTGTGTACATAATTGATAACTAGGTAATTGTGAAGTTTTATGTATCCAAGATTTGCTTGATACCCGAATACAGCCAAATTTTTTTGAATACCTTGTTCGTTAATTACTAAAACTAGCATATTGTGTTTCCCATTAAAAAATAGAAATATCTAAGTTAGCTCGAACAATTTCTTTGTATTTTAGGTTTCCCTTATCGATAATGTAGTAAGCATATGAGTGAGCAGAAGAAGTAATCACTCAGTCTCATTTTTTATAAACCGTTAAACTTGAAGCAGTTGTTGATGATGATCCTAATAATGGACAGTACTCATTCTCAAAAAAATGATCCTAATAATGGACAGTACTCCAACAGCGTTGAACGTGTCTCTTGTCAGATATTTATGGCCTTCTTTCTGAGCATATTTTATCAAAAAAAAATGATGCCTGGTTGTTATAGTTTGTGTTACTGCAGTATACTGTGTGTTCCTCTTGTTATTGTTTGAAGAAAGATAAATTAGAGAAAGGAGGGAGGATTTATCTGTCCAGTGCTTTCTTTGAGCTTACTGTTGGTTATTATCTCATGTTGCAGGCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAATTGA</genome_strand>
        <mrna_strand>TCAATTCCCCCAATTTTTCAGATTCAAGTTACTGTTATTCGGGTAAATTTCTTCGAATTAGGGTGCATACAAACATGGCCTCATCAGCTGCCATCAACAACATCGAAAGAGCTCACCAGATGTACAGGGAAGGTAGATATGCCCAAGCTCTGGGTTTTTATACCGATGCTCTTTCTTTGGCTAAAACAAACTCCCAAAAGATCGCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322851" ref_strand="+" ref_description="SGN-U322851        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | tetratricopeptide repeat (TPR)-containing protein, contains Pfam profile PF00515 TPR Domain; similar to infertility-related sperm protein (Homo sapiens) GI:10863768, TPR-containing protein involved in spermatogenesis TPIS (Mus musculus) GI:6272680 | chr1:20981360-20983014 REVERSE | Aliases: T6H22.6, T6H22_6(evalue: 3e-23, score=105) genbank/nr: OSJNBa0008M17.15(evalue: 7e-23, score=110)">
      <seq>gctcttcacagtaatcgtgctgcttgtttcctcaaacttcacgatttcaaaaaggttacatctttatttattgaattacatcaaacatttgttcaattcgacctctcaaactttgaacttgatgctttgacctttctgatttcgaatggctagttgatatatagtgctgtgacaccatcacagtggtaacaaatggttgctcttttggaaattcaatcttttactcaattcagcatgggttataaagttttctcttttcagcaataacatggttcaaatgaagcaaaaagggttatcctttttcctttttaaacttaatgtttaccctacttgcttggactttaagttccaaatcaataaatcaactttctttttcttggattggatacccccatagatagcaaatcattgaatcatcttttttggttttctaggttcttggttttccttgttggttggctctttatatctcaaaatacaaggacttggatgagtagcttaagatcttaactgatttgctcatcatgaagtgaatattgtattggactctagcagaggcgtagccaggattttagtgaagggtgttcgaacttcgaagaggcagcagatgaatgcacattggtgcttgaacttgatcaaaaacacacaggcgcgctgatgttgcgcgctcaaaccttagtcaccctcaaggagtaccattcagcactttttgatgtcaacaggttaattgaaattgatccatcatcagaagtgtatcaaaacctccatgcccgtctgaagacacnattggtagtcattctgccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="11502" stop="14755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11802" g_stop="12401" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="600" r_length="600" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12402" i_stop="14249" i_length="1848">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14250" g_stop="14455" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="806" r_length="206" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U322851" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11802" e_stop="12401"/>
          <exon e_start="14250" e_stop="14455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAGGTTACATCTTTATTTATTGAATTACATCAAACATTTGTTCAATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAACAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGCAAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTGGATTGGATACCCCCATAGATAGCAAATCATTGAATCATCTTTTTTGGTTTTCTAGGTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAGGTAAATACAAAAAAATAAAAGAAGAAAAATCATGAAAGGGCGCAATTTTTTTTAGTGAAGCTACATAATATTTAGCTAAGTCATAAAAGCACTTGTTATGATACTAACAATTGTATAAATTAAATTAACTTAAAAAGAGATGAAGTAAATTCTTCTAGTGAAAGCATAATCCAAATAATTATTCAATCCTACTTGAAAAGATTTCATATCTTGAATTTTTTTAATCGATAAACTTATTAGAAATAATACTAAATCTCTCTTCATTACATTAGGCACTACGAAATCGCCTAAAACATTATCAAATTGTATTTTAAGTGTTGAGTCCCATATCGGTGAGATGAGAAGAATTTGGACTCTTCAAGGTTTTGGGCAATACTTTCATCATGAGCTAGCATTTAGGGTTGAGTTGGGCCTAAGGTCTATTTAACGTGATAGCAGAGCTAGGCCCATTCCAATTTGTGGTTTACCGATGTTGGGTCCCCTTATAACTTGTCCATGCTCCAGGTGTCCAAATCTAAGTGTGAGGTGGGTGTTGAATCCTACATCAGTGGGATGAGGAGAATTTAGACTCTTTATATGGTCTTGAAAAGTTTTCCTTTCATGAGCTAGCTTTTGAAGTTGAGTTAGATCTCGAATAATGAAATAAGAGAGTATGTCTTGTGCTTAGTTTTGTGATGCCTATAAATAATACTCCACCCGTTTCAAATTATATGATATTTTTTGCTTTCCGAGTGTCAAGTTGACTAATCTTTGAAGCTAAGTTGGATTAAATCAACACTATGTTTGAACTCTATGAAAATTACTATAAGTTATGATATTTCTCATGTCAATATGATAAAAATAATACATTTTAAAATATTGGTGAAAATTTACATAGTTTGAATCTTGAATAATGAAAAATACTTCCCCTTTTTTTGATAGCAATAAAATATTTCTCATTGTCTTCTTGTAATAATAACACAAGAACCCGTTAAGAAGAATATTTAATATGAGAGTATATTTTCTCAGCACAAGCAGCAAGAGTTAGTGAACGACTCATCTTATTTGTTCTATTTTACTTTAAAAAAATGTACGCAGATAATAGCTGTAGGAATCGAACCCGTGCCTCTTTAGAAAGTCAGACCAGCCTTGGCCGCTGAGCTATCACTCTCAGTTGTGTCAAGAGTGAATGATTGTATGTTAAAAATGATATTTCAGCTCTACAAACAGTGTTCAGCTGACACCCTTCCAAGGCTGTAGCTCCACCAGTGGATGTTAGTAATTTGTTTTCAATGACCGGGCTGTGTACATAATTGATAACTAGGTAATTGTGAAGTTTTATGTATCCAAGATTTGCTTGATACCCGAATACAGCCAAATTTTTTTGAATACCTTGTTCGTTAATTACTAAAACTAGCATATTGTGTTTCCCATTAAAAAATAGAAATATCTAAGTTAGCTCGAACAATTTCTTTGTATTTTAGGTTTCCCTTATCGATAATGTAGTAAGCATATGAGTGAGCAGAAGAAGTAATCACTCAGTCTCATTTTTTATAAACCGTTAAACTTGAAGCAGTTGTTGATGATGATCCTAATAATGGACAGTACTCATTCTCAAAAAAATGATCCTAATAATGGACAGTACTCCAACAGCGTTGAACGTGTCTCTTGTCAGATATTTATGGCCTTCTTTCTGAGCATATTTTATCAAAAAAAAATGATGCCTGGTTGTTATAGTTTGTGTTACTGCAGTATACTGTGTGTTCCTCTTGTTATTGTTTGAAGAAAGATAAATTAGAGAAAGGAGGGAGGATTTATCTGTCCAGTGCTTTCTTTGAGCTTACTGTTGGTTATTATCTCATGTTGCAGGCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAATTGAATCCATCATCAGAAGTGTATCAAAACCTCCATGCCCGTCTGAAGACACAATTGGTAGTCATTCTGCCTTT</genome_strand>
        <mrna_strand>GCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAGGTTACATCTTTATTTATTGAATTACATCAAACATTTGTTCAATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAACAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGCAAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTGGATTGGATACCCCCATAGATAGCAAATCATTGAATCATCTTTTTTGGTTTTCTAGGTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAAATTGATCCATCATCAGAAGTGTATCAAAACCTCCATGCCCGTCTGAAGACACNATTGGTAGTCATTCTGCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U341536" ref_strand="-" ref_description="SGN-U341536        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | tetratricopeptide repeat (TPR)-containing protein, contains Pfam profile PF00515 TPR Domain; similar to infertility-related sperm protein (Homo sapiens) GI:10863768, TPR-containing protein involved in spermatogenesis TPIS (Mus musculus) GI:6272680 | chr1:20981360-20983014 REVERSE | Aliases: T6H22.6, T6H22_6(evalue: 1e-11, score=67.4) genbank/nr: At1g56090(evalue: 8e-10, score=67.4)">
      <seq>ctgaagacagttatgttccaaaaatgaaatcgtatgagcaaccgtcgtctagctgggaagcaatcccacagccaaaaggacattcccggcttgactattcaagatgggatagggttgaagatgagtttagtgaagatgacgatggcgatgatgatgacaatgattttcaacctcagtatagattccgtgtcaaaactattggtgtacgagctgttaagtaagacgaagaaagtatttaatgcaaattgcatgaattgggccatacaattctttgttgtttccaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="14762" stop="15651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15062" g_stop="15344" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="284" polyA_stop="306"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U341536" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341536" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15062" e_stop="15344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAGTCAGTGATGTTCCAAAAATGGAATCGTCTGAACAACCGTCGTCTAGCTGGGAAGCAATCCCACAGCCAAAAGGACATTCACGGCTTGACTATTCAAGATGGGATAGGGTTGAAGATGAGTCTAGTGAAGATGACGATGACGATGATGATGACAATGATTCTCAACCTCAGTATAGATTCCGTGTCAAAACTATTGGTGTACGAGCTGTTAAGTAAGACGAAGAAAGTATTTAATGCAAATTGCATGAATTGGGCCATACAATTCTTTGTTGTTTCCT</genome_strand>
        <mrna_strand>CTGAAGACAGTTATGTTCCAAAAATGAAATCGTATGAGCAACCGTCGTCTAGCTGGGAAGCAATCCCACAGCCAAAAGGACATTCCCGGCTTGACTATTCAAGATGGGATAGGGTTGAAGATGAGTTTAGTGAAGATGACGATGGCGATGATGATGACAATGATTTTCAACCTCAGTATAGATTCCGTGTCAAAACTATTGGTGTACGAGCTGTTAAGTAAGACGAAGAAAGTATTTAATGCAAATTGCATGAATTGGGCCATACAATTCTTTGTTGTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336921" ref_strand="+" ref_description="SGN-U336921        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:5648763-5651160 FORWARD | Aliases: F3O9.32(evalue: 5e-52, score=201) genbank/nr: gi|54310820|gb|AAV33647.1| putative protein [Avicennia marina] (evalue: 1e-61, score=239)">
      <seq>tcacacacatttcttcatttccaaaccccattttctcagaaattagggtttggagatgtcggacaacagcatcattgaaagcagtcggaatgccggcccggatttttaccttcccgatgaaatactttctgttattccgacggacccatatgaccaattggaccttgcccggaagatcaccttcatggcaatcgcttctcgcgttacaagtctggagtctgacatggacaggctccggcagaatcttaacggaaaggatcgcctcatcctcgacctcgaggataaggtctctcagctcgaaaacgcctgtcaccgggccgaattgcgattgaacatcaccctccaagataatatgaaactgtcgaaggagagagataatctggctattactgcaaagaagcttggtcgtgacttatcatagttggagacctttaaaaggcaattggtgcagactttgagtgatgatgactcatctcaagctgaaactgtagatattggcatttatgatcaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="15922" stop="18403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16222" g_stop="16573" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16574" i_stop="16672" i_length="99">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16673" g_stop="16741" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="421" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16742" i_stop="17757" i_length="1016">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17758" g_stop="17811" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="475" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17812" i_stop="18064" i_length="253">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18065" g_stop="18103" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="514" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U336921" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16222" e_stop="16573"/>
          <exon e_start="16673" e_stop="16741"/>
          <exon e_start="17758" e_stop="17811"/>
          <exon e_start="18065" e_stop="18103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACACACATTTCTCCATTTCCAAACCCCATTTTCTCAGAAATTAGGGTTTGGAGATGTCGGACAACAGCATCATTGAAAGCAGTCGGAATGCCGGCCCGGATTTTTACCTTCCCGATGAAATACTTTCTGTTATTCCGACGGACCCATATGACCAATTGGACCTTGCCCGGAAGATCACCTCCATGGCAATCGCTTCTCGCGTTACAAGTCTGGAGTCTGACATGGACAGGCTCCGGCAGAATCTTAACGGAAAGGATCGCCTCATCCTCGACCTCGAGGATAAGGTCTCTCAGCTCGAAAACGCCTGTCACCAGGCCGAATTGCGATTGAACATCACCCTCCAAGATAATGTATTTCTGCAAAAATCACTACTTTTTCATTCCCTTAGCTTTTGCTTTTCATTTCCATTTAAAGTTTCTTTTTTTCTTTTTCTTTTTGGGAATTAAAAGATGAAACTGTCGAAGGAGAGAGATAATCTGGCTATTACTGCAAAGAAGCTTGGTCGTGACTTAGCAAAGGTTAATGCTTTTCTTCAATTATTATTGTTTTTTATACTTCTCCTGCTCAATTCTAGGGATACTCTCTCATGAATCATGATTTTCATTCATCTGTTTATGCTTTTAGCCTTTCTAAGGGTCTATTCTTTAGATTAACTTTTGAGGGTTACTTTCAATTGCTGATTTAGATGATCAATTCACCAGCAAGGCTAGTGAAACAGATGTTCTTTTTCTTGTAATATTAAAAGTAACTCTTACTAGGCTAAAGCCTCTGGAAACTAGTTGTAGTATTACTTAAGCTGACCATCATAAAAATCTTGAAGGGAAAAAAGGACCATTTTAAACATCTGTGGATATGTTTGGGATTGCAATGGAACAGAACGTTTGCTACTTGCTTAGTTGATTTGGAAAAATCATGCAGAACTACATGCTTGACTACATGTCTCCCTTCACACATTTGGTCTAACATGTTCTTGGTCTCAATTTATAAACCTGAGATAATTTTTGGGGAGAGGAGGGGAAGGGGAGGCATCCATGCTTCATTTTTTTCTTGGGATGCTAATGAAGAACTTCAGCAGTTAAATTAATTTGCTCTTGTGTTATATGGAATACAAGCAAGTAAACTGCTTGCTAATAAGTTCATTTGAATGTTTAAAGTAGAGCTCATCTCATGATGATTTACTTTTCCTGGATGCCTGATGACAATGTAAAAAATAAGCACACAGTTTGTGAGTTTACTGTTATTGACATTTATAGTACACTTGGAAGGGAAGAATCCTTTCCCTTTATTTCAGCTAAAATTGTTATTATACTTGCTAAATACTGCCAGCGAATGTGAATGTGTTAAAAAATTGAAAAGCAGAGGCTTATGGTTACTGCTTTATATGCTTTCGGTTCTTTCGTAGTGCTTATTTCCTGTATTGGACAGTATTCTTGTCATCCCTCTTAAGAAAGAATATTGAAAGTGGAAATTTCATAGGCTAATCTGCTAATTTCATTTCAACTGCATAAACTTACTTCCTTTTTTGTTTAAACAGTTGGAGACCTTTAAAAGGCAATTGGTGCAGTCTTTGAGTGATGATGACTCATCTGTAAGTTTCATAATATTCATTTTTTGGCATTTTTTTTAGAGTATTATTAGAAGGTCACCAGCACTTGCAAAAAGAAAATTTGGGTATAATCTGTAATATTATAAACAAGAATGAACGTGATTTCCATTGACTTGTAGGACAGTACAAAAAATTGAGGCTCAAGCTCTTCTTTTTAGAAGTTTTGTTTCCCTTCAAGAGATTTCTTCTTTTCTTTTATCGACTGTGATGATCTTTTCTTTTTTGACCATGGCAGCAAGCTGAAACTGTAGATATTGGCATTTATGATCAATCT</genome_strand>
        <mrna_strand>TCACACACATTTCTTCATTTCCAAACCCCATTTTCTCAGAAATTAGGGTTTGGAGATGTCGGACAACAGCATCATTGAAAGCAGTCGGAATGCCGGCCCGGATTTTTACCTTCCCGATGAAATACTTTCTGTTATTCCGACGGACCCATATGACCAATTGGACCTTGCCCGGAAGATCACCTTCATGGCAATCGCTTCTCGCGTTACAAGTCTGGAGTCTGACATGGACAGGCTCCGGCAGAATCTTAACGGAAAGGATCGCCTCATCCTCGACCTCGAGGATAAGGTCTCTCAGCTCGAAAACGCCTGTCACCGGGCCGAATTGCGATTGAACATCACCCTCCAAGATAAT...................................................................................................ATGAAACTGTCGAAGGAGAGAGATAATCTGGCTATTACTGCAAAGAAGCTTGGTCGTGACTTATCATAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGACCTTTAAAAGGCAATTGGTGCAGACTTTGAGTGATGATGACTCATCT.............................................................................................................................................................................................................................................................CAAGCTGAAACTGTAGATATTGGCATTTATGATCAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336920" ref_strand="+" ref_description="SGN-U336920        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:5648763-5651160 FORWARD | Aliases: F3O9.32(evalue: 1e-31, score=134) genbank/nr: gi|54310820|gb|AAV33647.1| putative protein [Avicennia marina] (evalue: 1e-32, score=143)">
      <seq>tttctccattttcaaaccccattttctcaggattacggtgacgagatgtcggacaacaccatcattgaaagcatcccttacataacaccactgcttactccaattgacacaccaaaaataacgtttggtactgtatacatcagacaatgtcctgatgcattatctcctcgaaggatatctggcagtacctatccaacaattcctcaatttcaacgccggacatctggcagtacctctccaacaattcctcaatttcaacgtctagtttcaatgtcatcattctattcttcgagtcaacagtcgagtcaacagtcctcagcagctaactctcctccaagggcacggccaaaaccagctcaaactcctctagctgatgggaaggagttcttccgtcaagccacgagtcttctgtcttatgagcacttcaatgcgtttctcgcaaacataaaggaactaaatgctcaaaagccatctcgtgaggaaactttgaaaaaagcacaagatattcttggaacggataacaaggatctatatctatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="15931" stop="19682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16231" g_stop="16304" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16305" i_stop="18450" i_length="2146">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18451" g_stop="18732" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="355" r_length="282" r_score="0.940"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18733" i_stop="19007" i_length="275">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19008" g_stop="19053" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="401" r_length="46" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19054" i_stop="19130" i_length="77">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.283" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19131" g_stop="19209" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="480" r_length="79" r_score="0.937"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19321" g_stop="19382" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="542" r_length="62" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U336920" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16231" e_stop="16304"/>
          <exon e_start="18451" e_stop="18732"/>
          <exon e_start="19008" e_stop="19053"/>
          <exon e_start="19131" e_stop="19209"/>
          <exon e_start="19321" e_stop="19382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCCATTTCCAAACCCCATTTTCTCAGAAATTAGGGTTTGGAGATGTCGGACAACAGCATCATTGAAAGCAGTCGGAATGCCGGCCCGGATTTTTACCTTCCCGATGAAATACTTTCTGTTATTCCGACGGACCCATATGACCAATTGGACCTTGCCCGGAAGATCACCTCCATGGCAATCGCTTCTCGCGTTACAAGTCTGGAGTCTGACATGGACAGGCTCCGGCAGAATCTTAACGGAAAGGATCGCCTCATCCTCGACCTCGAGGATAAGGTCTCTCAGCTCGAAAACGCCTGTCACCAGGCCGAATTGCGATTGAACATCACCCTCCAAGATAATGTATTTCTGCAAAAATCACTACTTTTTCATTCCCTTAGCTTTTGCTTTTCATTTCCATTTAAAGTTTCTTTTTTTCTTTTTCTTTTTGGGAATTAAAAGATGAAACTGTCGAAGGAGAGAGATAATCTGGCTATTACTGCAAAGAAGCTTGGTCGTGACTTAGCAAAGGTTAATGCTTTTCTTCAATTATTATTGTTTTTTATACTTCTCCTGCTCAATTCTAGGGATACTCTCTCATGAATCATGATTTTCATTCATCTGTTTATGCTTTTAGCCTTTCTAAGGGTCTATTCTTTAGATTAACTTTTGAGGGTTACTTTCAATTGCTGATTTAGATGATCAATTCACCAGCAAGGCTAGTGAAACAGATGTTCTTTTTCTTGTAATATTAAAAGTAACTCTTACTAGGCTAAAGCCTCTGGAAACTAGTTGTAGTATTACTTAAGCTGACCATCATAAAAATCTTGAAGGGAAAAAAGGACCATTTTAAACATCTGTGGATATGTTTGGGATTGCAATGGAACAGAACGTTTGCTACTTGCTTAGTTGATTTGGAAAAATCATGCAGAACTACATGCTTGACTACATGTCTCCCTTCACACATTTGGTCTAACATGTTCTTGGTCTCAATTTATAAACCTGAGATAATTTTTGGGGAGAGGAGGGGAAGGGGAGGCATCCATGCTTCATTTTTTTCTTGGGATGCTAATGAAGAACTTCAGCAGTTAAATTAATTTGCTCTTGTGTTATATGGAATACAAGCAAGTAAACTGCTTGCTAATAAGTTCATTTGAATGTTTAAAGTAGAGCTCATCTCATGATGATTTACTTTTCCTGGATGCCTGATGACAATGTAAAAAATAAGCACACAGTTTGTGAGTTTACTGTTATTGACATTTATAGTACACTTGGAAGGGAAGAATCCTTTCCCTTTATTTCAGCTAAAATTGTTATTATACTTGCTAAATACTGCCAGCGAATGTGAATGTGTTAAAAAATTGAAAAGCAGAGGCTTATGGTTACTGCTTTATATGCTTTCGGTTCTTTCGTAGTGCTTATTTCCTGTATTGGACAGTATTCTTGTCATCCCTCTTAAGAAAGAATATTGAAAGTGGAAATTTCATAGGCTAATCTGCTAATTTCATTTCAACTGCATAAACTTACTTCCTTTTTTGTTTAAACAGTTGGAGACCTTTAAAAGGCAATTGGTGCAGTCTTTGAGTGATGATGACTCATCTGTAAGTTTCATAATATTCATTTTTTGGCATTTTTTTTAGAGTATTATTAGAAGGTCACCAGCACTTGCAAAAAGAAAATTTGGGTATAATCTGTAATATTATAAACAAGAATGAACGTGATTTCCATTGACTTGTAGGACAGTACAAAAAATTGAGGCTCAAGCTCTTCTTTTTAGAAGTTTTGTTTCCCTTCAAGAGATTTCTTCTTTTCTTTTATCGACTGTGATGATCTTTTCTTTTTTGACCATGGCAGCAAGCTGAAACTGTAGATATTGGCATTTATGATCAATCTGTTCATAAGTCATATCCTTTAAAAGGTAATTTCACCATTGACATTTTAAGTCCTTCGAATTTTGTTTACTTTTTATGTTTCAGATATCATGTGACTTTAGCTGTTTCAAGCTATCGAGAGCTGATGTTGTGAGTTTGATTTTGATAATTCTATCTTGCAGAGGAGGTGAATAGCTACACAGTGCATCATTCTTTCAGTGGTTCTGTAGACGGAAGAGGAAGTAATGGTGACGGTATTTGACTTTACATGTTCTTACATGATAATATTAGAATGTTGTGAAAGCTGTGTAATTATTATATCTTTTTTCTTGGATCCAGCTTCAAAGCACGCTTTGCAAAGGTTTTCCAGCCCTTACATAACACCACTGCTTACTCCAAGTGACACACCAAAAATAGCTTCTGCTAGTGTATCCCCCAGACGATGTTCTGCTGCAGTATCTCCTCGGAGGATATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCGAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAGGTTTCCAAGAGTTGTCTTTTTTCTTTCCAATTTCCCTGTATAAGCTTATACAAATGTTACTGCTGTAGATGTCGTTACACACATTGAGAGTCATTCTTTATATGAGATGCAAACTTGTGTTGACTCCAATATTTACATTATATACACAATTTTGCTTTAGTGTAAGAATGATTCTATACGTGTGTAACAAACACTCAACAACTTTTGCTAGCTGATATTGTTTCCTTTTGGACAAATTGTTTATTACTAATTAGTTCATGTATGTGAATTTTAAGCTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAGGTATCTAAATCTTTGACTTTTGTTCTTTTTAATTTTTTTGAGTAAACGATCCTGATGACCAGCATGTGTTGACTCAGGAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAGGTGATGAATATAATCTTAGTTATTAGACTGTCCTATGATTACCTTGTATTTGCTTAATTCAATATCTAAATGCTTTTCTGTTTTTTCTTTTTGCACATCGTATTATTTTAGGAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATT</genome_strand>
        <mrna_strand>TTTCTCCATTTTCAAACCCCATTTTCTCAG-GATTACGGTGACGAGATGTCGGACAACACCATCATTGAAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTACATAACACCACTGCTTACTCCAATTGACACACCAAAAATAACGTTTGGTACTGTATACATCAGACAATGTCCTGATGCATTATCTCCTCGAAGGATATCTGGCAGTACCTATCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCTAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAG...................................................................................................................................................................................................................................................................................CTCAAACTCCTCTAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAC.............................................................................GAGTCTTCTGTCTTATGAGCACTTCAATGCGTTTCTCGCAAACATAAAGGAACTAAATGCTCAAAAGCCATCTCGTGAG...............................................................................................................GAAACTTTGAAAAAAGCACAAGATATTCTTGGAACGGATAACAAGGATCTATATCTATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U319790" ref_strand="+" ref_description="SGN-U319790        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:5648763-5651160 FORWARD | Aliases: F3O9.32(evalue: 4e-43, score=171) genbank/nr: gi|54310820|gb|AAV33647.1| putative protein [Avicennia marina] (evalue: 1e-43, score=179)">
      <seq>tacacagtgcatcattctttcagtggttctgtagacggaagaggaagtaatggtgacgcttcaaagcacgctttgcaaaggttttccagcccttacataacaccactgcttactccaagtgacacaccaaaaatagcttctgctagtgtatcccccagacgatgttctgctgcagtatctcctcggaggatatctggcagtacctctccaacaattcctcaatttcaacgccggacatctggcagtacctctccaacaattcctcaatttcaacgtcgagtttcaatgtcatcattctattcttcgagtcaacagtcgagtcaacagtcctcagcagctaactctcctccaagggcacggccaaaaccagctcaaactcctcgagctgatgggaaggagttcttccgtcaagccaggagtcgtctgtcttatgagcagttcagtgcgtttctagcaaacataaaggaactaaatgctcaaaagcaatctcgtgaggaaactttgaaaaaagcagaagagatttttggaacggataacaaggatctctatctatcattccaagggatgcttaaccgtggtgttcgttgacagtacaaaaagtcatcttgggtgtatattcccatcttatggtagcttaaacatttaacataagtcttgcttagtgatctaaagttgaccaaaggacttgtggaactcttgatctatgttccaatttgaggtgcagtatcgctaaacatcagctcaaaatcttttgaggtgcaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="17978" stop="19890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18278" g_stop="18335" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18336" i_stop="18420" i_length="85">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18421" g_stop="18732" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="370" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18733" i_stop="19007" i_length="275">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19008" g_stop="19053" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="416" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19054" i_stop="19130" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.283" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19131" g_stop="19209" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="495" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19321" g_stop="19590" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="765" r_length="270" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U319790" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18278" e_stop="18335"/>
          <exon e_start="18421" e_stop="18732"/>
          <exon e_start="19008" e_stop="19053"/>
          <exon e_start="19131" e_stop="19209"/>
          <exon e_start="19321" e_stop="19590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACAGTGCATCATTCTTTCAGTGGTTCTGTAGACGGAAGAGGAAGTAATGGTGACGGTATTTGACTTTACATGTTCTTACATGATAATATTAGAATGTTGTGAAAGCTGTGTAATTATTATATCTTTTTTCTTGGATCCAGCTTCAAAGCACGCTTTGCAAAGGTTTTCCAGCCCTTACATAACACCACTGCTTACTCCAAGTGACACACCAAAAATAGCTTCTGCTAGTGTATCCCCCAGACGATGTTCTGCTGCAGTATCTCCTCGGAGGATATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCGAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAGGTTTCCAAGAGTTGTCTTTTTTCTTTCCAATTTCCCTGTATAAGCTTATACAAATGTTACTGCTGTAGATGTCGTTACACACATTGAGAGTCATTCTTTATATGAGATGCAAACTTGTGTTGACTCCAATATTTACATTATATACACAATTTTGCTTTAGTGTAAGAATGATTCTATACGTGTGTAACAAACACTCAACAACTTTTGCTAGCTGATATTGTTTCCTTTTGGACAAATTGTTTATTACTAATTAGTTCATGTATGTGAATTTTAAGCTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAGGTATCTAAATCTTTGACTTTTGTTCTTTTTAATTTTTTTGAGTAAACGATCCTGATGACCAGCATGTGTTGACTCAGGAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAGGTGATGAATATAATCTTAGTTATTAGACTGTCCTATGATTACCTTGTATTTGCTTAATTCAATATCTAAATGCTTTTCTGTTTTTTCTTTTTGCACATCGTATTATTTTAGGAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTTAAACATTTAACATAAGTCTTGCTTAGTGATCTAAAGTTGACCAAAGGACTTGTGGAACTCTTGATCTATGTTCCAATTTGAGGTGCAGTATCGCTAAACATCAGCTCAAAATCTTTTGAGGTGCAACCT</genome_strand>
        <mrna_strand>TACACAGTGCATCATTCTTTCAGTGGTTCTGTAGACGGAAGAGGAAGTAATGGTGACG.....................................................................................CTTCAAAGCACGCTTTGCAAAGGTTTTCCAGCCCTTACATAACACCACTGCTTACTCCAAGTGACACACCAAAAATAGCTTCTGCTAGTGTATCCCCCAGACGATGTTCTGCTGCAGTATCTCCTCGGAGGATATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCGAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAG...................................................................................................................................................................................................................................................................................CTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAG.............................................................................GAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAG...............................................................................................................GAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTTAAACATTTAACATAAGTCTTGCTTAGTGATCTAAAGTTGACCAAAGGACTTGTGGAACTCTTGATCTATGTTCCAATTTGAGGTGCAGTATCGCTAAACATCAGCTCAAAATCTTTTGAGGTGCACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U319789" ref_strand="+" ref_description="SGN-U319789        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:5648763-5651160 FORWARD | Aliases: F3O9.32(evalue: 1e-25, score=100) genbank/nr: gi|30684901|ref|NP_564000.2| expressed protein [Arabidopsis thaliana] gi|4966372|gb|AAD34703.1| ESTs gb|N38586 and gb|N38613 come from this gene. [Arabidopsis thaliana] gi|26452357|dbj|BAC43264.1| unknown protein [Arabidopsis thaliana] gi|30725370|gb|AAP37707.1| At1g16520 [Arabidopsis thaliana](evalue: 7e-24, score=100)">
      <seq>cttatacaaatgttactgctgtagatgtcgttacacacattgagagtcattctttatatgagatgcaaacttgtgttgactccaatatttacattatatacacaattttgctttagtgtaagaatgattctatacgtgtgtaacaaacactcaacaacttttgctagctgatattgtttccttttggacaaattgtttattactaattagttcatgtatgtgaattttaagctcaaactcctcgagctgatgggaaggagttcttccgtcaagccaggtatctaaatctttgacttttgttctttttaatttttttgagtaaacgatcctgatgaccagcatgtgttgactcaggagtcgtctgtcttatgagcagttcagtgcgtttctagcaaacataaaggaactaaatgctcaaaagcaatctcgtgaggaaactttgaaaaaagcagaagagatttttggaacggataacaaggatctctatctatcattccaagggatgcttaaccgtggtgttcgttgacagtacaaaaagtcatcttgggtgtatattcccatcttatggtagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="18477" stop="19761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18777" g_stop="19209" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19321" g_stop="19461" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="574" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U319789" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18777" e_stop="19209"/>
          <exon e_start="19321" e_stop="19461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATACAAATGTTACTGCTGTAGATGTCGTTACACACATTGAGAGTCATTCTTTATATGAGATGCAAACTTGTGTTGACTCCAATATTTACATTATATACACAATTTTGCTTTAGTGTAAGAATGATTCTATACGTGTGTAACAAACACTCAACAACTTTTGCTAGCTGATATTGTTTCCTTTTGGACAAATTGTTTATTACTAATTAGTTCATGTATGTGAATTTTAAGCTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAGGTATCTAAATCTTTGACTTTTGTTCTTTTTAATTTTTTTGAGTAAACGATCCTGATGACCAGCATGTGTTGACTCAGGAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAGGTGATGAATATAATCTTAGTTATTAGACTGTCCTATGATTACCTTGTATTTGCTTAATTCAATATCTAAATGCTTTTCTGTTTTTTCTTTTTGCACATCGTATTATTTTAGGAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTT</genome_strand>
        <mrna_strand>CTTATACAAATGTTACTGCTGTAGATGTCGTTACACACATTGAGAGTCATTCTTTATATGAGATGCAAACTTGTGTTGACTCCAATATTTACATTATATACACAATTTTGCTTTAGTGTAAGAATGATTCTATACGTGTGTAACAAACACTCAACAACTTTTGCTAGCTGATATTGTTTCCTTTTGGACAAATTGTTTATTACTAATTAGTTCATGTATGTGAATTTTAAGCTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAGGTATCTAAATCTTTGACTTTTGTTCTTTTTAATTTTTTTGAGTAAACGATCCTGATGACCAGCATGTGTTGACTCAGGAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAG...............................................................................................................GAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U329950" ref_strand="+" ref_description="SGN-U329950        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: hypothetical(evalue: 3e-05, score=23.9)">
      <seq>gctaaacatcagctcaaaatcttttgaggtgcaaccttatagattttcaaacaattgagattggtacagattgtgctattgctagctgatgagtcgatgatctcatgtttaaattctcattaaaccatggatgcatgctgtaaattgttcccttctttttctcttgtttcagttttgcattttcaattttaccgtcacgtgtagcacatctgagaggagcgggtggtgccagcagatggcagttgaatcaactcgtaagttgaatttccttctgttgctgctctcgctctttcatttgcacgtgtatgggtatgtatattttcttctgctttactgtcagcagcttgaaattttcttctgtggagaaatgagtatctgcagtattggcactagtagtgttatcatgcagacattaatatgtaaattgaagggtatactattgatacttagcatccataactaggaaacgaaaactctgatgttgtagttgtatctgctgtaagaatctaatacaacacactatcaattcattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgaggggggcccgtacccaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="19254" stop="20388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19554" g_stop="20090" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="537" r_length="537" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="544" polyA_stop="571"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U329950" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19554" e_stop="20090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAACATCAGCTCAAAATCTTTTGAGGTGCAACCTTATAGATTTTCAAACAATTGAGATTGGTACAGATTGTGCTATTGCTAGCTGATGAGTCGATGATCTCATGTTTAAATTCTCATTAAACCATGGATGCATGCTGTAAATTGTTCCCTTCTTTTTCTCTTGTTTCAGTTTTGCATTTTCAATTTTACCGTCACGTGTAGCACATCTGAGAGGAGCGGGTGGTGCCAGCAGATGGCAGTTGAATCAACTCGTAAGTTGAATTTCCTTCTGTTGCTGCTCTCGCTCTTTCATTTGCACGTGTATGGGTATGTATATTTTCTTCTGCTTTACTGTCAGCAGCTTGAAATTTTCTTCTGTGGAGAAATGAGTATCTGCAGTATTGGCACTAGTAGTGTTATCATGCAGACATTAATATGTAAATTGAAGGGTATACTATTGATACTTAGCATCCATAACTAGGAAACGAAAACTCTGATGTTGTAGTTGTATCTGCTGTAAGAATCTAATACAACACACTATCAATTCATTGAATT</genome_strand>
        <mrna_strand>GCTAAACATCAGCTCAAAATCTTTTGAGGTGCAACCTTATAGATTTTCAAACAATTGAGATTGGTACAGATTGTGCTATTGCTAGCTGATGAGTCGATGATCTCATGTTTAAATTCTCATTAAACCATGGATGCATGCTGTAAATTGTTCCCTTCTTTTTCTCTTGTTTCAGTTTTGCATTTTCAATTTTACCGTCACGTGTAGCACATCTGAGAGGAGCGGGTGGTGCCAGCAGATGGCAGTTGAATCAACTCGTAAGTTGAATTTCCTTCTGTTGCTGCTCTCGCTCTTTCATTTGCACGTGTATGGGTATGTATATTTTCTTCTGCTTTACTGTCAGCAGCTTGAAATTTTCTTCTGTGGAGAAATGAGTATCTGCAGTATTGGCACTAGTAGTGTTATCATGCAGACATTAATATGTAAATTGAAGGGTATACTATTGATACTTAGCATCCATAACTAGGAAACGAAAACTCTGATGTTGTAGTTGTATCTGCTGTAAGAATCTAATACAACACACTATCAATTCATTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U327081" ref_strand="+" ref_description="SGN-U327081        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: ABA3 | Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. | chr1:5659408-5665442 FORWARD | Aliases: F19K19.13, F19K19_13, SIR3, ABA DEFICIENT 3, MOLYBDENUM COFACTOR SULFURASE, LOS5, ABA3(evalue: 0, score=903) genbank/nr: gi|22128583|gb|AAL71858.1| molybdenum cofactor sulfurase [Lycopersicon esculentum](evalue: 0, score=1480)">
      <seq>cattcatttgagttggggccgggcttgagtaagaaattccaatcgcaaccgctgcaaaatgaacatcgaatcggagaaagagcaatttctgaaggaatttggaagctattatggttatgccaattcccccaaaaacattgatgaaattagagctactgaatttaagcgcttaaacgatacggtatacttggatcatgctggggcgactctctattccgagtctcaaatggaagctgtgtttaaggacctcaattctactctttatggaaatcctcatagccagagcacttgtagtttggctaccgaggacattgttgggaaagcacgccaacaggtccttagtttcttcaatgcatcaccaagagaatatagctgtatattcacttctggggcaacagctgcactaaagcttgtcggtgagacattcccatggagcagtaacagcagttttatgtactcaatggagaatcataacagcgtccttgggattagggaatatgctctcagtaaaggagctgctgcttttgcagttgacattgaagatacacatgttggtgaatcagaaagcccacagtctaacttaaaactaacacagcaccacattcagagaagaaatgaaggtggcgttctgaaagaagggatgacaggtaacacatacaacttgtttgcattcccatcagaatgcaatttttcaggtcgaaaattcgaccctaacctgattaagattatcaaagaagggtctgaaagaatcttagaaagctcccagtattccagaggttgctggttagttctgatagatgctgctaaaggatgtgctaccaatccaccaaatttatcaatgtttaaagcagactttgttgtgttctcattctacaagttatttggctatccaactggccttggagcactcattgttcgaaaggatgctgctaagctgatgaagaagacctactttagtggaggcacggtgactgcagctattgctgacgttgactttttcaaaagaagagaaggtgtagaggaattttttgaggatggaaccatttcattcttgagcataacagcaattcaacatgggttcaaaataattaatatgctaacgacatcttcgattttccggcatacaacatcaattgcagcatatgtgaggaataagcttttggcactgaagcatgaaaatggagaatttgtttgcacgctgtacgggttattatctagtgagatgggccccacagtttcattcaacatgaaaagaccagatggaacatggtatggataccgtgaggtggaaaaattggcaaccttggcaggaattcaactgcggacaggatgtttttgcaatcctggtgcttgtgctaaatatcttggtttgtcacacttggatcttctttcaaatattgaggctgggcatgtgtgctgggatgatcgtgacattttacatggaaaaccaactggagcagtcagagtatcttttggttacatgtcaacattcgaagatgccatgaaattcgtcaacttcgtggaaagtaattttgtgatatcatcttttaatcggtgtgcattgcagccaaggtccatctctctgccaattgaagggattgcagaagctgctgcacggcatttcctcacatctattactgtctatccaataaagtcttgtgcgggatttagtgtggatcagtggcctctaacatctactgggttattgcatgatcgtgaatggattctcaagagcacaaccggtgaaattcttacccaaaagaaggttccagaaatgtgctatatctccacgctgattgatctcaatttgggggaactgtttgtagagtcacctcgttgcaaggagaaattgcagattgaactcaaatccagctcactggtcactgaaagagatgaaatggatatccaaaatcatagatatgaagtcacaagttacaacaatgaggttgatatctggttcagcagggcgattgatcgaccttgcactctactaagaaattccgattcccagagtcactcctgcataaataagaacgggagtcctggcatgtgcagggatgttggtgctagattgaattttgttaatgaagcccaatttctgctgatatctgaagaaagcataaaggacctcaactctaggctgaaatctaatggacgaaggagaaatggtggacaagcagtacaagttggtgtaatgagatttcgacccaatcttgtagcatctagtggtgaaccatatgcagaagatggatggagcaatataatattggaggcaaatattttatgtcattgggtggttgcaatcgttgccagatgatcaatataaatccagaggctggggaggtgcagaggtttactgaacctttggcaactttagcaggttacaggagagcaaaggggaaaataatgtttggcatactgctaagatatgagaataatacgaaaaccgagtcagatacatggattcgtgtgggagaagaaataattccaaatggagataggcattgattgtttttcgtggaagttcctatttgagacttgtaagtagtcacaacagaggtgatacaagtgttcaatattgtgaagcagcgcaaaaaacacttgctctagccaggtcaatacatcaaactgtactttgttgctgttctctatctgcaaaagagtatgttcttctaaaagaactcgctaagatcttcattctttgtaaccagtactattataagctaataaatacccaatcgtaatattaacttctttggggctgcgtatagttttatgtgtaagtttttagtttgtgtagtgactcggtgtgcaagtacaacccatggatgatgcaaaaatcctcaggacatcgccatgatcttattaacagtgctttctcgagagttgagaccaaacgggtggaaaagatagtgaacgttgaaagctttattcctctcaactatgaaggttaattatgaatgtacatgttaatacttagcaatattggtggaataatatgtttgtcattttgttttcactcttcgcaaaggaacaaagaatccattgctcaaatttcagaagtaaaaggatatactactatcaattatgtcttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="38300" stop="51041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38600" g_stop="38775" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38776" i_stop="38852" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38853" g_stop="38951" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="275" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38952" i_stop="39062" i_length="111">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39063" g_stop="39121" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="334" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39122" i_stop="39349" i_length="228">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.797" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39350" g_stop="39510" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="495" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39511" i_stop="40393" i_length="883">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.490" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40394" g_stop="40545" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="647" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="40546" i_stop="40834" i_length="289">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="40835" g_stop="40961" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="774" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="40962" i_stop="41490" i_length="529">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="41491" g_stop="41593" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="775" r_stop="877" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="41594" i_stop="41716" i_length="123">
            <donor d_prob="0.817" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="41717" g_stop="41762" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="923" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="41763" i_stop="42038" i_length="276">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="42039" g_stop="42077" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="924" r_stop="962" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="42078" i_stop="42156" i_length="79">
            <donor d_prob="0.901" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="42157" g_stop="42313" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="963" r_stop="1119" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="42314" i_stop="43015" i_length="702">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.903" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="43016" g_stop="43103" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1120" r_stop="1207" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="43104" i_stop="43441" i_length="338">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="43442" g_stop="43558" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1208" r_stop="1324" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="43559" i_stop="44437" i_length="879">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="44438" g_stop="44515" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1325" r_stop="1402" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="44516" i_stop="44604" i_length="89">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="44605" g_stop="44706" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1403" r_stop="1504" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="44707" i_stop="45455" i_length="749">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.744" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="45456" g_stop="45546" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1505" r_stop="1595" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="45547" i_stop="45716" i_length="170">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="45717" g_stop="45821" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1596" r_stop="1700" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="45822" i_stop="46020" i_length="199">
            <donor d_prob="0.480" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="46021" g_stop="46085" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1701" r_stop="1765" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="46086" i_stop="46992" i_length="907">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="46993" g_stop="47144" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1766" r_stop="1917" r_length="152" r_score="0.993"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="47145" i_stop="48780" i_length="1636">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="48781" g_stop="49013" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1918" r_stop="2150" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="49014" i_stop="49540" i_length="527">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="49541" g_stop="49677" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="2151" r_stop="2286" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="49678" i_stop="49836" i_length="159">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="49837" g_stop="49947" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="2287" r_stop="2397" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="21">
          <gDNA_intron_boundary i_start="49948" i_stop="50040" i_length="93">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="22">
          <gDNA_exon_boundary g_start="50041" g_stop="50741" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="2398" r_stop="3098" r_length="701" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U327081" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>3099</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38600" e_stop="38775"/>
          <exon e_start="38853" e_stop="38951"/>
          <exon e_start="39063" e_stop="39121"/>
          <exon e_start="39350" e_stop="39510"/>
          <exon e_start="40394" e_stop="40545"/>
          <exon e_start="40835" e_stop="40961"/>
          <exon e_start="41491" e_stop="41593"/>
          <exon e_start="41717" e_stop="41762"/>
          <exon e_start="42039" e_stop="42077"/>
          <exon e_start="42157" e_stop="42313"/>
          <exon e_start="43016" e_stop="43103"/>
          <exon e_start="43442" e_stop="43558"/>
          <exon e_start="44438" e_stop="44515"/>
          <exon e_start="44605" e_stop="44706"/>
          <exon e_start="45456" e_stop="45546"/>
          <exon e_start="45717" e_stop="45821"/>
          <exon e_start="46021" e_stop="46085"/>
          <exon e_start="46993" e_stop="47144"/>
          <exon e_start="48781" e_stop="49013"/>
          <exon e_start="49541" e_stop="49677"/>
          <exon e_start="49837" e_stop="49947"/>
          <exon e_start="50041" e_stop="50741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCATTTGAGTTTGTTCCGGGCTTGAGTAAGAAATTCCAATCGCAACCGCTGCAAAATGAACATCGAATCGGAGAAAGAGCAATTTCTGAAGGAATTTGGAAGCTATTATGGTTATGCCAATTCCCCCAAAAACATTGATGAAATTAGAGCTACTGAATTTAAGCGCTTAAACGGTAAGATTTTTCATCTTCCAATTTCAGAATTTTGTTGAAAAATTGTTCCGTTGACTTCACTATTTATTTACTTGTAGATACGGTATACTTGGATCATGCTGGGGCGACTCTCTATTCCGAGTCTCAAATGGAAGCTGTGTTTAAGGACCTCAATTCTACTCTTTATGGAAATCCTCGTATCCTTCCTATCACTTTTCTCTATGAACTTTCTTCAACATGTTTGATTCTGTATTTCTTCACCCTGCATAAATTTTTAGCTGATACCTTAATTCTGTGAAAAACAATAGATAGCCAGAGCACTTGTAGTTTGGCTACCGAGGACATTGTTGGGAAAGCACGCCAACAGGTGAACATCTTCTTCTGCACTATTTTTATTGCTTCTGTTGTCATCATAATCTCTGCATTAGTCCACAATGCTCTGGAAATGTATATTGATGTATGCTGCATTGATATTATCTAAATGCTAAGCTGATGAGAGTCACTGCACATATGTTCTGTCATATTCAGTATTTCACATGTGATAAAGTTTCTGTTGTAATACTTTCTCTTACCATTGAATCACGACTCTATCCAGGTCCTTAGTTTCTTCAATGCATCACCAAGAGAATATAGCTGTATATTCACTTCTGGGGCAACAGCTGCACTAAAGCTTGTCGGTGAGACATTCCCATGGAGCAGTAACAGCAGTTTTATGTACTCAATGGAGAATCATAACAGCGTCCTTGGGATTAGGGAGTATCCTGAATGGATTAAACCTTTTCATCAAATTTTGTTACTTCTGCTGTCGATTACTTTATGAAAGCTTTCCTCTTTAGCAGTGTATTTAGTTTCTTAATCTACGGTACTACTTCCTGCTTCAAGTGCTACTCTTTTTCACTGAAATACCGGTCCACCTAATCAAAGGCTCCCGACGATTCTATAAATTATCAATATTTTCTTCATGAGGAAGGCATGAATCTTTCCGGCTTTATATTTCAGCAAATGATCGCATCTCTACCTGTCACTGCATCGGGACCATGCTATCTTTGGACATTTGAAAGAATTACCACGAATTGTATGTGTTATCGATGATGTTTCATATATGCAGACCTGATCTGTGGATACGTTCAACACTGCCATTGTTGCTCTTATCGACTGATGTTCTGATGCGTTTAATCATGGTGGTTCTTTTTGAAGTTCTATGATTCCATTCACTTCAAAATCACTTGTTCCACACTTGCTGCTGAAGTGAGGTGTAGAACTCTACTGTTTATCTCATGGATATGATTATACATGTTTCTGGTAGAATTCACTGTACCTCCAAGGGTAACTTTTTATTCTTGACAGATCCTAGTTCTATCTAACCAGCCACAAAATTTCTGTTCTTGTTATTGAAGTGAGACCAAAAATCAAGGACCCAATTCATCTCTAAGTTTGTGTACTATTATCTATGTGTTAATACTTGCTCCGTACGGATAAACCTATTAAGCCAGATAATTGGAAGAGAAAAAACCTTTTTACACAGTAGGAAGAGTTTGCAGAAACAGTTGAGTAGATGGAAGATTTTGCATGATTTTTGATCTTGGTTCATTTTAAATTTGTGTGTATCTCAAGTATTCTTTTCCTTAAGAGTTACTAGATATGCTCTCAGTAAAGGAGCTGCTGCTTTTGCAGTTGACATTGAAGATACACATGTTGGTGAATCAGAAAGCCCACAGTCTAACTTAAAACTAACACAGCACCACATTCAGAGAAGAAATGAAGGTGGCGTTCTGAAAGAAGGGATGACAGGTACCTTTTTATCAATAGTTTCATCAACTTCTACCTTCCACCCCCTTCCACCCACCAAGTCTATAAAGGTAGTTAGCACCTTCAACTCAAATTAGATGTTGTCTGAGTTAATTAAACCCCATCAATCAAGAGAGCCTGTATGACCTTATACCTGTTAGATGGATTATCTTTTTCCTTTTGTTAGTTTTAGAAGTGAAGTAGAAGCTGCTTCACTAATGAAGCACATATTACCAATGTCTTTATCAACTTCAACTCGTTGTAATCTGACACTGTAGTCTTCTTGTTACAGGTAACACATACAACTTGTTTGCATTCCCATCAGAATGCAATTTTTCAGGTCGAAAATTCGACCCTAACCTGATTAAGATTATCAAAGAAGGGTCTGAAAGAATCTTAGAAAGCTCCCAGTATTCCAGGTAAAAGAATAAAAAACTTCTCCAGTGATTGAGAATAGCCGAGGTGCTAAAATTCTGACATTTATCTGAATAGTACTTGTAAGATGTACTCCCAGTAAATCTATAAGAAAATAGACCCTCTTTCAAGCTTGGTTGAGATTTGAGAATAGATTTTAGTGCCTCAAACATCCACCAAAAAAGATATTTCTTTTTAGGCTGGTTCAAATTATGGGAGTATCTAATGATTTTGATATGTTTGACTACAAAAAATTTAGAACATGGCGCATTCCTTAAGTATAGTGGCGCAAAGAAGATTATTTGTTTGTTATAGCTACAAGAGAATATGTTACATTTTGAACAATGTATGCTGATTCAGTCAGGGTTTTGACTTGAAACATCCATTGGTCAACCTTTTGTCCTCAATGTGGTGCTATTCTTATCTCCTTAGCTGGCAAAGCTTGTTCATATATCTTCGAAAACTTTTTATATCTCCATCATTGAGTTGGTCTTGCGCAGATGGGCAGATATAAATTTTCTTTTCTGAATGCAGAGGTTGCTGGTTAGTTCTGATAGATGCTGCTAAAGGATGTGCTACCAATCCACCAAATTTATCAATGTTTAAAGCAGACTTTGTTGTGTTCTCATTCTACAAGGTACTTATATTTTGATACCTGCTGTTTAAGATTACAGGAGGTACTTATATCTCATACCTGCTGTTTTAAGATTATGACTAACATCACGGAGCTTGAAAAGAGTTTTATTTGTTTCTTGTTTAGTTATTTGGCTATCCAACTGGCCTTGGAGCACTCATTGTTCGAAAGGGTAAGCAGCTAAATAAGAAAGCCGATTTTTGTTGTGTTTCCTCACTTATTCTTGTTTAATTTTCTTCTTCGTGTAGTTTACTTCTGACTTGTTTCCCTCTCTGCCTCTATCCCTCTACTTCTCTGTTTATGGAGAGAATGTTGGGTGGAAATGGTGGCAAAGATACCTAGGTTTTTATGTTTTTTCTAGTTGTGTAACAAGATAGACTTATATTTCTCCCCTTTTTTCATCAATGTGAGAATTAACAAAATTTCCTGATCTCTTTCTATTGATCAGATGCTGCTAAGCTGATGAAGAAGACCTACTTTAGTGGAGGTTCTTTTTTAGTGCCTTCTCGTGTTATGATTATATAATTGAAAACTCTAGCAATTTAAGTTAACCTGGATTCTTCTAGGCACGGTGACTGCAGCTATTGCTGACGTTGACTTTTTCAAAAGAAGAGAAGGTGTAGAGGAATTTTTTGAGGATGGAACCATTTCATTCTTGAGCATAACAGCAATTCAACATGGGTTCAAAATAATTAATATGCTAACGACATCTTCGATTTTCCGGTAAGTGAGAGCTTCCTCTCTTTTTTTCGGGATAAGGTGAGAGCTTGCTTCTTTTGTGGGTGGAAGATTCTGAAATTGAATAATGATCAGAATTTTATTGAGATTGCACATATTTTGCTGTCATTACAGATGAACAGAGACATTATATCGTTCACACTAGTGATTAGATTTATTGCGCACTTTTCCGCTTATAGTCTCTTTTTATGATTTATCTAGTGAGTGAGTCCTTCTAATATTATTTGATTAATCCTGCTCATTGCTGCTTTGTAGATGTTGTCGATCTTTTATTTTTTTACTACATAGGTACTGCCAACCTTTTTATAACTAGATGTTACCACAAGTACTGAAATAAGTCAATTTTTGTTTGGCTATTAGGCTAATTATCTTTTGAGTGAACAAGAAAACTTTGTTCTAAAGGTGTAAAATTTTGGGATTTCAAAGTTCCTATGCCTTTTTTTGTCTTCGTTTGATTTGGCAGATAAATTCCTCTTTGTTTAGAGGATATATGGGCATAGTTTCCAGTATCTTTTTTGTGGGTAGAGAAACTAGTCATTCATTTCTGAATCATCTAATTTAGTTCCAACAGAAATATACCAAGAATTTTACAGAAACTGTTGGCCCTTTCTCTTTCTACCCCCCTTAATTGAAGTTGGAGCCTAATGAAAAAAACATGTTCTGAAATGTGCTTTTCTTTTCTGCAAGGCATACAACATCAATTGCAGCATATGTGAGGAATAAGCTTTTGGCACTGAAGCATGAAAATGGAGAATTTGTTTGCACGCTGTACGGGGTAAATATATCGAACATAGCATTCTCGTGACTGGTTTATGTTTTTGGAATTTGGTTGGAATTAGATTCTCGTGAAGAAATTTCTTTATGTCCTAGGCAAAGGCAAGTTTGTTACTGTTGCTCATTCGTGCAGTGGTGATGCAATGATTTTGTTTTTGGGTTGCTTTTTTTTTTGGGGTAGATTTTGATTTTACTCGCGACTTTTTCTATGGTATTCTGTCAGTTTATGAATTGTCTGGTTTGTTATGAAATTGTCCTATGGTTCCGAAGGTGACCAAGTTAATATGACTTTTGTTTTTTTGAGAATAGTAAGTTAAGTTAATATGACTTTTATCTCAGTTATTATCTAGTGAGATGGGCCCCACAGTTTCATTCAACATGAAAAGACCAGATGGAACATGGTATGGATACCGTGAGGTGGAAAAATTGGCAACCTTGGCAGGAATTCAACTGCGGGTAAGAGTTCAATGGTCATATTGTCTATGAAGTATGAATTTTGTTCTGTTTCCCTTGGGAGATGAGATGCTTGCTACTTTATTCTGTTGGAACATAACCCCAGAGCAGATTGATGCTGCTGTTTCTGATATAATGTGCTACTTTCACATGTTATCTTTTTTCAATGTCAAGGAGGATGATATGACTTCCAAGAGGTGTCTTTTTATGATTTATCATTTGTCTTCATTTATATCTGAATGCTTTGATATACTTATCTGGATTTATGAAGTTCTCCATTTAAACTTCTGTTAGCTTGTCTTTGATTTGTGAATTTTGGTCCTTCAGATGCATGGTCACTTACTCTTTTAACCGCCTTCACCACTGTTAGATGCGTTAACTGCCACATTTAGAGGAGTTTTTTAGTCTTCAGTTATTGCCCTCCACAATACGTGCAACTTTTTTACTTTTTGGAATGAGCAGATACCCCATCATGTAATAATCTATGGGAGACCAAATAAGGGATGACTTGCATCCGTACTAACACAATAAGGTCACTGTCTCCTTTTTATGTTTAAGCTTTTGTCCACAAATACCGAGGGTTGTTGTATACATTTGGTTATCAGTAAGCCTATTTGAATATGTAACATAATTTTGGAATAATAGTAAGTAATAACAAATTATCTTAGCTGGAATTGTCTGAGAAAGAGGAGTTTGCAATACAAGGAAATGTTAAATATTTTATGAGAAAGCCCCTAAAGAATAGTCTATCTTAATTCTTAAAGGAATGGAGGGAGGATTAGTCCACAACTTTTGAAACTGGTAATTGAATATCTCAGATATATAATGCTGTTATATGATATGACTAAATTCTTGCTTCTTTTTCCCTGTATTTTTGTATAGACAGGATGTTTTTGCAATCCTGGTGCTTGTGCTAAATATCTTGGTTTGTCACACTTGGATCTTCTTTCAAATATTGAGGTATGTGTTTCCTTTCCCCTCATTTTAATCTGTTACATGGGAAAAAGGGACCACCAATGGCAACAAATTCAAATTATCATTTCATTTAGGCTGGGCATGTGTGCTGGGATGATCGTGACATTTTACATGGAAAACCAACTGGAGCAGTCAGAGTATCTTTTGGTTACATGTCAACATTCGAAGATGCCATGGTAAGGGAACCCACCATTCCCAACCTAATTCCCAAAAAATGAAGTGTAGTTCTATATTTTTTATAGTACAACATGCTTCTTTCTTCAAGATTTTGATGTGCCAAATATTGAACGGTTGGAGTTAAAAATTTACATTTCAACTTAAACGTGGGGCAATCTCTTTATACCTAATTTGTCTTGGGCAATCCTCACTTCGTAAGCTAATTAAAGGTTGTGTTAAGCCTAACATGCACTTTCATAATAGAGAGAGAAAGGAAAATATGTAGCTTAATGGTCACATAGAACAATAATTGCCAACTTCCAATTTTTCACTTTCACTTGGCCATTAGACAGGCAAGCTGAAAGAGAGAAGGAATAAAGAACTAAAACAAAGATGATCTCTTTAGTTCTTCAAGTTTCTATCTGAAGAAAGAGCAACCTTCTAGTCATTTGGATATAAAAAGCTACAAGCTACTTTTCTTTTGACATGGTAAAGAATATATCTAAAACAGCAATATGATTTCTGAAAAAGCTAAATTGTTGAAAAACGGAATATGGTTTGCTACTCCTATTACTTTTTGGTTCTTTTCTATTTCTATATTTCCCTTTTCTGTTGTTTGTTTAGGATGTTGCTGGGCAGAAGCTTCAATTTCTATGAAGTTATCTTGTAATTGCCTGAATGATTGATTAGCAAACTAATCTTTGCTCTGGATGTTCCTCTGAGAGCTAGTCTTATTTACTACTTCATTCCGTTCTACTTGTCTATGCAGAAATTCGTCAACTTCGTGGAAAGTAATTTTGTGATATCATCTTTTAATCGGTGTGCATTGCAGCCAAGGTCCATCTCTCTGCCAATTGAAGGTCAACTTTTGTATCTTTCTACTATTAGGCATGCATTAAATCGATATGTTGAATTGGCTTCTTGTAGACCAGAAGTTGATTGCAAGTGTGGAAGTTTGTCATTTTAGTACCATAAAAGAAATTGTGCAAACTTGTTTAGTCAACCCATGCATTTCATTGACCAATTGCAGGGATTGCAGAAGCTGCTGCACGGCATTTCCTCACATCTATTACTGTCTATCCAATAAAGTCTTGTGCGGGATTTAGTGTGGATCAGTGGCCTCTAACATCTACTGGTAGCTATTCTGCTACATCTCATAGGAAAATTCAGTAGTTCAATTTTTATGGCACATATGATTTTGTCAAAATCAAGAGATATTTGCTCATTTCCATTGCATATAAGAAATTGATCCATGTTTTCTTTAGAATATCAAAGTATTTTGACTTTCAATGTATCATTCTTACATGTTGTCATTCCGTTCAATATGAATTTAGGGTTATTGCATGATCGTGAATGGATTCTCAAGAGCACAACCGGTGAAATTCTTACCCAAAAGAAGGTAGAATACTTTATAATTCACATCATGTGTGTTGATGCCTGTTATCCATGTGCAATGCGATGGTAAAACTACCTTCATTCACCCATTATAATTTAATTTAGTAAAGTGGAAAACATAGCATTGTTGTCTATCATTTGATCTACCCATCCTTCAATGTGTTTTGCTTTTAACCTTTTTAATCTCCTAGACAAGCCTTACTAATAATTGACTATTTTCTCAAAGTAGCATGCAACTTCTTAATGTGGGTTGTGTGCATTGTCAGGCTACATGAGGTCTTTTTTTCGACCTTCCCAATGAAATTATTTATTTTCTCTCTTTTCTTCTAATTCTTTTTTCTATTTGTTTGAGATCGAGGGGTAGTTGGTGTTTTCTAATTTGATTTAATGTATTTTAGCTTCTTTTTTGAAGCCTTACAATGCTCATTATATAATAGAATTGATTAGATGCCATCCTTTTTGTACAAGATATTCAACAATTCATGGTCTTAAAAAGAAGTTGAATAGCCTATAATCTGTACTACCAATAACATTTCAAGTCCTTTGAATAACTCTCCATTATCTCAATATATAAATCCTATTTTCTCCTGTGTTCCACTACTAACTTTGAAGTGTCTTAATCTCTACACTCCATGTTTTAACCTGTCATCTAATTTACTTATTTTTTGTTTTTCTCGAAAACATTCTTGAAAATATGCAAAGTGTCATGCTCTCGATTGGGATATAATCTCTACTTTTATATCTAGACATGTATTTTTGTATGAGAAGCAAGTTACTACGGAAGCTTATATCTTTGAAAGATAATTAATGATTATTCAAAATTTACTAGCTATTGCCTCTTAATTATTGTTTCCGATCCAGTGTTGATTACTTCTGCATCAATATCTAAGTCAGGTGTATTTGCGTTCTAGGTTCCAGAAATGTGCTATATCTCCACGCTGATTGATCTCAATTTGGGGAAACTGTTTGTAGAGTCACCTCGTTGCAAGGAGAAATTGCAGATTGAACTCAAATCCAGCTCACTGGTCACTGAAAGAGATGAAATGGATATCCAAAATCATAGGTTTGAACTTCATCTTCACTTCTTTCCTTTTGATATTAAATACTTAAAAGTAGCTACCTCTTAAAAAAATAAAAATAAAAAATCACGTGAATCAATATGTAGAGCTTTACAACTCAACAAAGAGATCCACATAGCCGTCAAAAAAAATTCAAACGGCTTTATGTACATACATTTACAGACATAGTATAGAATCTTATAGTACCTACATATTCTTAACTTGGGTGAGCATCTATGTTTTTTCAGACTATTTTATTTGGTCGTATGTGTAAGAGCCCAACTTTTCTTCTATTCTCGAGTTCAATAATTTTTCCTGTACCTATGTTACTCGGAATCTTTCAAAATGTCAAAGGGTGTGTGTCGGATTCTCCAAAGTATTGTATTTTTGGAGAATCCGACACGGGTGCAGCATCAAAAGTGAAGAGCTCGCTCAACTTAGTCCTGTAGCACTAAAACTTTGTATTTTGAAGAAACTTTTTTTTTGAGAAGGATTTGTATTTTGAAGCTTAAGTTGTTAAAACTTTGTGATCGTGTATCTGAACTGACTTAAACAATGTTGTGTTGCAGTTTCATATATGGCTACCATTAAGTGAAGGGTTCTTTCTTCACTTTTACAGTTGTACTTATTTTTTAATCAGAAAGGTGAAGTTTCATTAAGATAACACGGTTTACGTACAGTAGAAAAAGTTAGAAAGGAAAAATAGTGCTCCTTAAGTTTGGTCTAATATTTATGAAGAATTTTGTTTGTGGGCTTGCATGTGAGTTTCTAAGTTCGAACCACTTAGATGTAGTGGTTGAAAAGATGATTAGGGTATGTGCGTTGTACTGATGTAAGTTCTGTTGTTGACCGTCTGGTATGGTTGCCTTTAGTGAAGCATGAGAAGTTATAATTCTTGACAATGTTTGCCCTAATATTTTTGAACGGTGGTGTCCAGGCCAACTTGTGCGACCTGGACTGTTCCATTAGGTACCAACTGCCTCCCACCCAGCAACACTACTATCGGGTAACTTTGTCTACCAAGGCTTAGGCAGATAGGAAGAAATCACCTAGTGTTTCGTCTCTTCTGTGGTTTGAACCTTATCTCTAAGGTTGCACGCACTTCATTGACCACTAGGCCACACATTTCGACCTTCACTGTGTTTGCTTTTCAAAGATTGTACTCATTGTTTTCCTTGTATGTTGGAGACTATAATTATGTTCTTTGTCATGTAATAGAGTGTTTGATTAGGATAAAGTGGGTGTATTTCTCATCTGAACAAAGAAATAGTTTATGGAACTAACTGTTTTTAAAGCTTTGGCTCATTGTCGAGCTTCAAACTTCAATTTATTCGTTCCAAAGCAGATTTTAAACAGTTGTGGTTTAATCAGTTGCTTTATTATACTTCCCAAAAGACAAAACCAAGACAAGAAGAAACTAAAAAAGGAGTGAACAGTATTTTGAGAAGGATGTCATTATTTTAGTCTGCATGTTCTTAAAATAGCTACCGTTATCTGTGACTACTGTGGTAGTTCATGTGGAAATGAAAAAGAATCTAAAAAGAAGTGTAGTTCATGAATACAGTCTATGTAAGTGGTGTTTTTGAATAGCAGTATTATAGTAATGCTCAATCATTTTTCATGTCTTTTTGATTTGGGTAGATATGAAGTCACAAGTTACAACAATGAGGTTGATATCTGGTTCAGCAGGGCGATTGATCGACCTTGCACTCTACTAAGAAATTCCGATTCCCAGAGTCACTCCTGCATAAATAAGAACGGGAGTCCTGGCATGTGCAGGGATGTTGGTGCTAGATTGAATTTTGTTAATGAAGCCCAATTTCTGCTGATATCTGAAGAAAGCATAAAGGACCTCAACTCTAGGCTGAAATCTAGTATGTTTTCTTTTCTTTTCTCTTTGTTAGTAGTGAGCAAACTCTCTTTCTGGTATTGAGCTCTTCTGAAATAGGAATATAAGGAAACTAGAGAATGCACCCAATACAATTGGCCAATTTGAGGCTATTCCTCTGAGCTGAATGCATAACAACTTTTAAACCATGTCTATACAATATTAGTGCAATAACTTCTGTTCAGAGGATACAAATGCTTTGCATTACTTGAATCTATGTTAGACGTGGTGGTATTTCTGTTTTTAGAGGAGACTTGAGTTCAGAAGTCTTACCTGTAGTAGCATGGCTGTTGCGGCTGTAGGAGGATCTAAAAGGAATTAAAAGTAAATGTATTTGCTGTCTGTTCAGTCTTGTATAGTCCACTATACTTGAATTATTTTCCTGCATAAGTCACTTGTATCACTTAATATGCTTCCTCTGATGGTGGTTAGTGATTTTTACAGAAAGGTTTATGTATAAAGCAAATAGGTTCATCAAAAATTCATTCGACCTTTTTTCTTTAATCTTTTTAGATGGACGAAGGAGAAATGGTGGACAAGCAGTACAAGTTGGTGTAATGAGATTTCGACCCAATCTTGTAGCATCTAGTGGTGAACCATATGCAGAAGATGGATGGAGCAATATAAATATTGGAGGCAAATATTTTATGGTGAGTTCTAACTTCTAGCTCGTATAAAATCAAGATATGGGAACATGAAGTGACTGTACATTCTGTCCTAAAATTATAGATGAGTATTCTTGTATTCAGTAAGTCAACAGAGGTGCTAAAAGTTCCTCATGTGTTCATACTTAAATTGTTTAAGTGCAGTCATTGGGTGGTTGCAATCGTTGCCAGATGATCAATATAAATCCAGAGGCTGGGGAGGTGCAGAGGTTTACTGAACCTTTGGCAACTTTAGCAGGTTACAGGAGAGCAAAGGTTAGAACCCACCTAAAAATGAAGAAACCCCCCCAAAAAATGCAGTTTGCTTGCTTAGTTAATTGCTTCTTACCATATCTCCCTTGCAAACAGGGGAAAATAATGTTTGGCATACTGCTAAGATATGAGAATAATACGAAAACCGAGTCAGATACATGGATTCGTGTGGGAGAAGAAATAATTCCAAATGGAGATAGGCATTGATTGTTTTTCGTGGAAGTTCCTATTTGAGACTTGTAAGTAGTCACAACAGAGGTGATACAAGTGTTCAATATTGTGAAGCAGCGCAAAAAACACTTGCTCTAGCCAGGTCAATACATCAAACTGTACTTTGTTGCTGTTCTCTATCTGCAAAAGAGTATGTTCTTCTAAAAGAACTCGCTAAGATCTTCATTCTTTGTAACCAGTACTATTATAAGCTAATAAATACCCAATCGTAATATTAACTTCTTTGGGGCTGCGTATAGTTTTATGTGTAAGTTTTTAGTTTGTGTAGTGACTCGGTGTGCAAGTACAACCCATGGATGATGCAAAAATCCTCAGGACATCGCCATGATCTTATTAACAGTGCTTTCTCGAGAGTTGAGACCAAACGGGTGGAAAAGATAGTGAACGTTGAAAGCTTTATTCCTCTCAACTATGAAGGTTAATTATGAATGTACATGTTAATACTTAGCAATATTGGTGGAATAATATGTTTGTCATTTTGTTTTCACTCTTCGCAAAGGAACAAAGAATCCATTGCTCAAATTTCAGAAGTAAAAGGATATACTACTATCAATTATGTCTTGACT</genome_strand>
        <mrna_strand>CATTCATTTGAGTTGGGGCCGGGCTTGAGTAAGAAATTCCAATCGCAACCGCTGCAAAATGAACATCGAATCGGAGAAAGAGCAATTTCTGAAGGAATTTGGAAGCTATTATGGTTATGCCAATTCCCCCAAAAACATTGATGAAATTAGAGCTACTGAATTTAAGCGCTTAAACG.............................................................................ATACGGTATACTTGGATCATGCTGGGGCGACTCTCTATTCCGAGTCTCAAATGGAAGCTGTGTTTAAGGACCTCAATTCTACTCTTTATGGAAATCCTC...............................................................................................................ATAGCCAGAGCACTTGTAGTTTGGCTACCGAGGACATTGTTGGGAAAGCACGCCAACAG....................................................................................................................................................................................................................................GTCCTTAGTTTCTTCAATGCATCACCAAGAGAATATAGCTGTATATTCACTTCTGGGGCAACAGCTGCACTAAAGCTTGTCGGTGAGACATTCCCATGGAGCAGTAACAGCAGTTTTATGTACTCAATGGAGAATCATAACAGCGTCCTTGGGATTAGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCTCTCAGTAAAGGAGCTGCTGCTTTTGCAGTTGACATTGAAGATACACATGTTGGTGAATCAGAAAGCCCACAGTCTAACTTAAAACTAACACAGCACCACATTCAGAGAAGAAATGAAGGTGGCGTTCTGAAAGAAGGGATGACAG.................................................................................................................................................................................................................................................................................................GTAACACATACAACTTGTTTGCATTCCCATCAGAATGCAATTTTTCAGGTCGAAAATTCGACCCTAACCTGATTAAGATTATCAAAGAAGGGTCTGAAAGAATCTTAGAAAGCTCCCAGTATTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTGCTGGTTAGTTCTGATAGATGCTGCTAAAGGATGTGCTACCAATCCACCAAATTTATCAATGTTTAAAGCAGACTTTGTTGTGTTCTCATTCTACAAG...........................................................................................................................TTATTTGGCTATCCAACTGGCCTTGGAGCACTCATTGTTCGAAAGG....................................................................................................................................................................................................................................................................................ATGCTGCTAAGCTGATGAAGAAGACCTACTTTAGTGGAG...............................................................................GCACGGTGACTGCAGCTATTGCTGACGTTGACTTTTTCAAAAGAAGAGAAGGTGTAGAGGAATTTTTTGAGGATGGAACCATTTCATTCTTGAGCATAACAGCAATTCAACATGGGTTCAAAATAATTAATATGCTAACGACATCTTCGATTTTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATACAACATCAATTGCAGCATATGTGAGGAATAAGCTTTTGGCACTGAAGCATGAAAATGGAGAATTTGTTTGCACGCTGTACGGG..................................................................................................................................................................................................................................................................................................................................................TTATTATCTAGTGAGATGGGCCCCACAGTTTCATTCAACATGAAAAGACCAGATGGAACATGGTATGGATACCGTGAGGTGGAAAAATTGGCAACCTTGGCAGGAATTCAACTGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGATGTTTTTGCAATCCTGGTGCTTGTGCTAAATATCTTGGTTTGTCACACTTGGATCTTCTTTCAAATATTGAG.........................................................................................GCTGGGCATGTGTGCTGGGATGATCGTGACATTTTACATGGAAAACCAACTGGAGCAGTCAGAGTATCTTTTGGTTACATGTCAACATTCGAAGATGCCATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCGTCAACTTCGTGGAAAGTAATTTTGTGATATCATCTTTTAATCGGTGTGCATTGCAGCCAAGGTCCATCTCTCTGCCAATTGAAG..........................................................................................................................................................................GGATTGCAGAAGCTGCTGCACGGCATTTCCTCACATCTATTACTGTCTATCCAATAAAGTCTTGTGCGGGATTTAGTGTGGATCAGTGGCCTCTAACATCTACTG.......................................................................................................................................................................................................GGTTATTGCATGATCGTGAATGGATTCTCAAGAGCACAACCGGTGAAATTCTTACCCAAAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCAGAAATGTGCTATATCTCCACGCTGATTGATCTCAATTTGGGGGAACTGTTTGTAGAGTCACCTCGTTGCAAGGAGAAATTGCAGATTGAACTCAAATCCAGCTCACTGGTCACTGAAAGAGATGAAATGGATATCCAAAATCATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGAAGTCACAAGTTACAACAATGAGGTTGATATCTGGTTCAGCAGGGCGATTGATCGACCTTGCACTCTACTAAGAAATTCCGATTCCCAGAGTCACTCCTGCATAAATAAGAACGGGAGTCCTGGCATGTGCAGGGATGTTGGTGCTAGATTGAATTTTGTTAATGAAGCCCAATTTCTGCTGATATCTGAAGAAAGCATAAAGGACCTCAACTCTAGGCTGAAATCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACGAAGGAGAAATGGTGGACAAGCAGTACAAGTTGGTGTAATGAGATTTCGACCCAATCTTGTAGCATCTAGTGGTGAACCATATGCAGAAGATGGATGGAGCAATAT-AATATTGGAGGCAAATATTTTATG...............................................................................................................................................................TCATTGGGTGGTTGCAATCGTTGCCAGATGATCAATATAAATCCAGAGGCTGGGGAGGTGCAGAGGTTTACTGAACCTTTGGCAACTTTAGCAGGTTACAGGAGAGCAAAG.............................................................................................GGGAAAATAATGTTTGGCATACTGCTAAGATATGAGAATAATACGAAAACCGAGTCAGATACATGGATTCGTGTGGGAGAAGAAATAATTCCAAATGGAGATAGGCATTGATTGTTTTTCGTGGAAGTTCCTATTTGAGACTTGTAAGTAGTCACAACAGAGGTGATACAAGTGTTCAATATTGTGAAGCAGCGCAAAAAACACTTGCTCTAGCCAGGTCAATACATCAAACTGTACTTTGTTGCTGTTCTCTATCTGCAAAAGAGTATGTTCTTCTAAAAGAACTCGCTAAGATCTTCATTCTTTGTAACCAGTACTATTATAAGCTAATAAATACCCAATCGTAATATTAACTTCTTTGGGGCTGCGTATAGTTTTATGTGTAAGTTTTTAGTTTGTGTAGTGACTCGGTGTGCAAGTACAACCCATGGATGATGCAAAAATCCTCAGGACATCGCCATGATCTTATTAACAGTGCTTTCTCGAGAGTTGAGACCAAACGGGTGGAAAAGATAGTGAACGTTGAAAGCTTTATTCCTCTCAACTATGAAGGTTAATTATGAATGTACATGTTAATACTTAGCAATATTGGTGGAATAATATGTTTGTCATTTTGTTTTCACTCTTCGCAAAGGAACAAAGAATCCATTGCTCAAATTTCAGAAGTAAAAGGATATACTACTATCAATTATGTCTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315567" ref_strand="+" ref_description="SGN-U315567        Tomato 200607 #1 [33 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase, identical to SP:Q43316 | chr5:2663191-2665793 REVERSE | Aliases: F8L15.10, F8L15_10(evalue: 4e-150, score=528) genbank/nr: porphobilinogen(evalue: 5e-153, score=544)">
      <seq>cggaaatggagaaattcgtcgctctaaatgcttcaaatttgagctccggttcccttttaccaattgggttttcttcgccttgccgtaaatctgcactttcacttcaacgccggcgggtccacgttaccagggcttccgttgctctagaacagcaagctcaaactaaggtcgctgtcatcagagttggaacacgaggaagccccctagctcttgcccaagcttatgagactcgagaaaagctaatagcctcgtttcctgacctggctgaagagggagccattgagatagtaataataaaaaccacaggtgataagatattaagtcagcctcttgcagatattggtggaaaagggttgttcacaaaagaaatagacgaagccctcatcaatggcgatattgatattgctgtccactcaatgaaagatgtgcccacatatctgccagagaagactatcttaccgtgcaaccttccacgtgaagatgtgagggatgcattcatttctttaactgcaggttccctggctgaacttccatcaggaagcacaattggtactgcttcactgaggagaaagtcccagattctccaccgctatccctcactcaatgtgttggagaatttcagaggcaatgtccagacaaggttgaagaaactgaatgagggagtagttcaagctacattattggcactggcagggcttaagcgtctgaatatgacagaaaatgtatcatcgatcctttctatagaggatatgctaccagctgttgctcagggtgccattggtattgcctgcagaagtgatgacgagacaatggccaactacattgctgctttaaatcatgaagaaaccagattagcaatagtttgtgagagagcatttttgacgaccttggatgggtcttgtcgcaccccaattgctggctatgcctgtcgaggtgaagatggagattgtatttttaaaggattagttgcctctccagatggaacgcgagttattgaaacctctagaaagggaccttatacgtctgaagacatgatacggatgggtgaagatgctggccaggaactactttcgaaagcaggtccaggattttttggcaactgagtaaagcttatgctcttatggtcgacctctgcctatgaaaaatgcagagatgtatcgaataacagggatagagatcggaattttatatttcacccctactataggattatgagtctacttatccttgtaactgtatcggcaatagaatttgaatactttgtatgttagtgtagcatttccacttcaatttggagtgtatccgaggaatggtgaatgtttgcagatttgtagaaaagttgtactggcggatttggattgtttttaatcactgtgagtaatttgtgcaactgttgtaagctaacgaaagagtatttcatcgttggcttaatttatgcaaggggtttggtccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="52875" stop="56750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53175" g_stop="53373" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53374" i_stop="54384" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.747" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54385" g_stop="54790" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="605" r_length="406" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54791" i_stop="55401" i_length="611">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55402" g_stop="55608" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="812" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.775" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55719" g_stop="55896" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="813" r_stop="990" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55897" i_stop="55985" i_length="89">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55986" g_stop="56449" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="991" r_stop="1454" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1455" polyA_stop="1472"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U315567" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1454</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53175" e_stop="53373"/>
          <exon e_start="54385" e_stop="54790"/>
          <exon e_start="55402" e_stop="55608"/>
          <exon e_start="55719" e_stop="55896"/>
          <exon e_start="55986" e_stop="56449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAATGGAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAGGTACTGTCAATTATTTACCCAATCTATTTGTACAAAAATACCTAATGGGCTTTATCTCAGCTTAAAGTTACAGTCTTTCAACTGAAAATTCGGATGTAAAAAGATTGCCGCTTTTACCAATTAATTGCTGTTTAGTCTTAGGTTTTGATAGATGATTCAAGATTAAATAATTGATGCTTTATTCTTATGTTTTTCTCTTGAGTGATAAAGTAAATATGGAAAAAAATTGTATTTGAAGTACATGAACAAGTATTTATCATATTATTCACTGAGGTGTCATTTAGTTCAATAGTCTCAGAACATTTAGTAATCAGAAATTAAAATGTGGGGTTAATGGCCCCATAGTTGGACAGAATCTAGATTTCTCTCATATCCTCCAAAGTAGTATAGTTTTGAAGGATCTGACACCCACCCGTAGGCAGTTTTTAAGAGTAGAGACATAATCTACTAACCTTTTCTGCCCTGTAATGTAATGATGCTAGTTGGACATATTTCGGATTAGCTTTATCCCAATTTCTTTCCACAATAGTTAACGGTCATCTTTATGCTTTTATCGATTATTTGTTGTATTTTAGTTATGATGTGTGCTAGTGTTAGTCAAAATGTAAGCTTTTTAAGGGGATCTGGCATTATGGAGAAAACAAAAATACAACTTTGTATGCTTGACTCCTCTTTGTGCTTGCCTTTTAGAAATTAACTAATGTTAGCAAGCAGATAAACCCTTTTTTTCTCCTTGCATTTTCCCCCTGGCATATATTTTCTAGCCAATCTATGTTCTTTTTGATGAATAAAAATATCTTGTTCATACTTCCCTTGTTCCATGAACATATTTGGTAACAACCATGTAATGTATATGGGATGAATTTCAACATTGCTTTGGATTAACTCTTCGTTCTATCTCCTTCTTTGCGTGTTCGGGTGGGATGATGGAAACTGACTGATATATCTATAAAGTGCTTTTGCTAAAACTCTTCTCTTATGGATTACAATGCAATTACTTGTGTAGGACAGCCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAATGTAAGTCTATTACCTATCACATCAAAGTCTCTGAAGAAGACCCATTGATCTCTGAGTGTGTGTTGATATCAGAAACAAAGTGAACTAAGAGTCTCCGTAAATTTTTCCATCAAGCTGCAGCCATAATTTATTTGAGTCATTGCTTCATGTATTGTGTTGGTATATATATGCCTTCTATGAAGGTAAAACCTTGAAAGTTAAATAGTTTACTTATACTACTACTTGGAGATTGTTTGCAACAACTAGGAATATGTTGCAATGGGCCAAATAATAAAAGAACTTCTGTGTGCTCAAAAAGATGGGTAGGATGACCTACGAGTGGAAAAAGAGTAAATTGAGGATTGTGTATTTCTTGTTGTGATATGTTACATAGCTTGGTATGCTCCAGGAGCAGTAATTGTTTTCTTGATAAGCCAAATGCGAAGCTCAGGTTTTCTATATCTGAATATCTTTTAGATGAAGCAAAATTTGTGGTGAAATTTTTTATGGTGGTTACTTCTGGCCTGAATTTTCTTATTTAGCTCAGCTCTGCCAATCTAACAACTTTTCCTCTTTGCTTTTATTTAGTTTGACAAGTCATGCTAATTATTTTATGTGAATTTTGTTTAAAGGTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATGGTATTTAGCACTCTTCTCTGTTATTACAAATACATTTCCTGCTCTACCATTGCTCATATCTCCTCTTTCGAGGGCTTTATTTCGCTCATATTTATCGGATGCAATTATAGGCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAGGTAAACGTTACTTCTTAGTTACAGAATTCTGAGGGATGTGTGAGTTACCTATTCTTTATGTTTATTTGATGTATAATCTTCAATTTCAGTTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTGAATACTTTGTATGTTAGTGTAGCATTTCCACTTCAATTTGGAGTGTATCCGAGGAATGGTGAATGTTTGCAGATTTGTAGAAAAGTTGTACTGGCGGATTTGGATTGTTTTTAATCACTGTGAGTAATTTGTGCAACTGTTGTAAGCTAACGAAAGAGTATTTCATCGTTGGCTTAATTTATGCAAGGGGTTTGGTCCAA</genome_strand>
        <mrna_strand>CGGAAATGGAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG..............................................................................................................GCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAG.........................................................................................TTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTGAATACTTTGTATGTTAGTGTAGCATTTCCACTTCAATTTGGAGTGTATCCGAGGAATGGTGAATGTTTGCAGATTTGTAGAAAAGTTGTACTGGCGGATTTGGATTGTTTTTAATCACTGTGAGTAATTTGTGCAACTGTTGTAAGCTAACGAAAGAGTATTTCATCGTTGGCTTAATTTATGCAAGGGGTTTGGTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335212" ref_strand="+" ref_description="SGN-U335212        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase, identical to SP:Q43316 | chr5:2663191-2665793 REVERSE | Aliases: F8L15.10, F8L15_10(evalue: 2e-66, score=249) genbank/nr: porphobilinogen(evalue: 1e-64, score=249)">
      <seq>gagaaattcgtcgctctaaatgcttcaaatttgagctccggttcccttttaccaattgggttttcttcgccttgccgtaaatctgcactttcacttcaacgccggcgggtccacgttaccagggcttccgttgctctagaacagcaagctcaaactaaggtcgctgtcatcagagttggaacacgaggaagccccctagctcttgcccaagcttatgagactcgagaaaagctaatagcctcgtttcctgacctggctgaagagggagccattgagatagtaataataaaaaccacaggtgataagatattaagtcagcctcttgcagatattggtggaaaagggttgttcacaaaagaaatagacgaagccctcatcaatggcgatattgatattgctgtccactcaatgaaagatgtgcccacatatctgccagagaagactatcttaccgtgcaaccttccacgtgaagaaactgaatgagggagtagttcaagctacattattggcactggcagggcttaagcgtctgaatatgacagaaaatgtatcatcgatcctttctatagaggatatgctaccagctgttgctcagggtgccattggtattgcctgcagaagtgatgacgagacaatggccaactacattgctgctttaaatcatgaagaaaccagattagcaatagtttgtgagagagcatttttgacgaccttggatgggtcttgtcgcaccccaattgctggctatgcctgtcgaggtgaagatggagattgtatttttaaaggattagttgcctctccagatggaacgcgagttattgaaacctctagaaagggaccttatacgtctgaagacatgatacggatgggtgaagatgctggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="52883" stop="56353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53183" g_stop="53373" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53374" i_stop="54384" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.747" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54385" g_stop="54665" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="472" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54666" i_stop="55443" i_length="778">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55444" g_stop="55608" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="637" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.775" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55719" g_stop="55896" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="815" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55897" i_stop="55985" i_length="89">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55986" g_stop="56053" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="816" r_stop="883" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U335212" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>883</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53183" e_stop="53373"/>
          <exon e_start="54385" e_stop="54665"/>
          <exon e_start="55444" e_stop="55608"/>
          <exon e_start="55719" e_stop="55896"/>
          <exon e_start="55986" e_stop="56053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAGGTACTGTCAATTATTTACCCAATCTATTTGTACAAAAATACCTAATGGGCTTTATCTCAGCTTAAAGTTACAGTCTTTCAACTGAAAATTCGGATGTAAAAAGATTGCCGCTTTTACCAATTAATTGCTGTTTAGTCTTAGGTTTTGATAGATGATTCAAGATTAAATAATTGATGCTTTATTCTTATGTTTTTCTCTTGAGTGATAAAGTAAATATGGAAAAAAATTGTATTTGAAGTACATGAACAAGTATTTATCATATTATTCACTGAGGTGTCATTTAGTTCAATAGTCTCAGAACATTTAGTAATCAGAAATTAAAATGTGGGGTTAATGGCCCCATAGTTGGACAGAATCTAGATTTCTCTCATATCCTCCAAAGTAGTATAGTTTTGAAGGATCTGACACCCACCCGTAGGCAGTTTTTAAGAGTAGAGACATAATCTACTAACCTTTTCTGCCCTGTAATGTAATGATGCTAGTTGGACATATTTCGGATTAGCTTTATCCCAATTTCTTTCCACAATAGTTAACGGTCATCTTTATGCTTTTATCGATTATTTGTTGTATTTTAGTTATGATGTGTGCTAGTGTTAGTCAAAATGTAAGCTTTTTAAGGGGATCTGGCATTATGGAGAAAACAAAAATACAACTTTGTATGCTTGACTCCTCTTTGTGCTTGCCTTTTAGAAATTAACTAATGTTAGCAAGCAGATAAACCCTTTTTTTCTCCTTGCATTTTCCCCCTGGCATATATTTTCTAGCCAATCTATGTTCTTTTTGATGAATAAAAATATCTTGTTCATACTTCCCTTGTTCCATGAACATATTTGGTAACAACCATGTAATGTATATGGGATGAATTTCAACATTGCTTTGGATTAACTCTTCGTTCTATCTCCTTCTTTGCGTGTTCGGGTGGGATGATGGAAACTGACTGATATATCTATAAAGTGCTTTTGCTAAAACTCTTCTCTTATGGATTACAATGCAATTACTTGTGTAGGACAGCCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAATGTAAGTCTATTACCTATCACATCAAAGTCTCTGAAGAAGACCCATTGATCTCTGAGTGTGTGTTGATATCAGAAACAAAGTGAACTAAGAGTCTCCGTAAATTTTTCCATCAAGCTGCAGCCATAATTTATTTGAGTCATTGCTTCATGTATTGTGTTGGTATATATATGCCTTCTATGAAGGTAAAACCTTGAAAGTTAAATAGTTTACTTATACTACTACTTGGAGATTGTTTGCAACAACTAGGAATATGTTGCAATGGGCCAAATAATAAAAGAACTTCTGTGTGCTCAAAAAGATGGGTAGGATGACCTACGAGTGGAAAAAGAGTAAATTGAGGATTGTGTATTTCTTGTTGTGATATGTTACATAGCTTGGTATGCTCCAGGAGCAGTAATTGTTTTCTTGATAAGCCAAATGCGAAGCTCAGGTTTTCTATATCTGAATATCTTTTAGATGAAGCAAAATTTGTGGTGAAATTTTTTATGGTGGTTACTTCTGGCCTGAATTTTCTTATTTAGCTCAGCTCTGCCAATCTAACAACTTTTCCTCTTTGCTTTTATTTAGTTTGACAAGTCATGCTAATTATTTTATGTGAATTTTGTTTAAAGGTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATGGTATTTAGCACTCTTCTCTGTTATTACAAATACATTTCCTGCTCTACCATTGCTCATATCTCCTCTTTCGAGGGCTTTATTTCGCTCATATTTATCGGATGCAATTATAGGCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAGGTAAACGTTACTTCTTAGTTACAGAATTCTGAGGGATGTGTGAGTTACCTATTCTTTATGTTTATTTGATGTATAATCTTCAATTTCAGTTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGC</genome_strand>
        <mrna_strand>GAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG..............................................................................................................GCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAG.........................................................................................TTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315566" ref_strand="+" ref_description="SGN-U315566        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase, identical to SP:Q43316 | chr5:2663191-2665793 REVERSE | Aliases: F8L15.10, F8L15_10(evalue: 3e-78, score=288) genbank/nr: gi|15241573|ref|NP_196445.1| hydroxymethylbilane synthase (porphobilinogen deaminase, chloroplast) (pre-uroporphyrinogen synthase) [Arabidopsis thaliana] gi|2495179|sp|Q43316|HEM3_ARATH Porphobilinogen deaminase, chloroplast precursor (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) gi|1084340|pir||S50762 hydroxymethylbilane synthase (EC 4.3.1.8) precursor - Arabidopsis thaliana gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|16930521|gb|AAL31946.1| AT5g08280/F8L15_10 [Arabidopsis thaliana] gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana](evalue: 2e-76, score=288)">
      <seq>attgatattgctgtccactcaatgaaagatgtgcccacatatctgccagagaagactatcttaccgtgcaaccttccacgtgaagatgtgagggatgcattcatttctttaactgcaggttccctggctgaacttccatcaggaagcacaattggtactgcttcactgaggagaaagtcccagattctccaccgctatccctcactcaatgtgttggagaatttcagaggcaatgtccagacaaggttgaagaaactgaatgagggagtagttcaagctacattattggcactggcagggcttaagcgtctgaatatgacagaaaatgtatcatcgatcctttctatagaggatatgctaccagctgttgctcagggtgccattggtattgcctgcagaagtgatgacgagacaatggccaactacattgctgctttaaatcatgaagaaacctctagaaagggaccttatacgtctgaagacatgatacggatgggtgaagatgctggccaggaactactttcgaaagcaggtccaggattttttggcaactgagtaaagcttatgctcttatggtcgacctctgcctatgaaaaatgcagagatgtatcgaataacagggatagagatcggaattttatatttcacccctactataggattatgagtctacttatccttgtaactgtatcggcaatagaatttgatactttgtatgttagtgtagcattttcacttcaatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="54281" stop="56590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54581" g_stop="54790" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54791" i_stop="55401" i_length="611">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55402" g_stop="55608" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="417" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.775" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55719" g_stop="55744" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="443" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55745" i_stop="55985" i_length="241">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55986" g_stop="56290" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="746" r_length="303" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U315566" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54581" e_stop="54790"/>
          <exon e_start="55402" e_stop="55608"/>
          <exon e_start="55719" e_stop="55744"/>
          <exon e_start="55986" e_stop="56290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAATGTAAGTCTATTACCTATCACATCAAAGTCTCTGAAGAAGACCCATTGATCTCTGAGTGTGTGTTGATATCAGAAACAAAGTGAACTAAGAGTCTCCGTAAATTTTTCCATCAAGCTGCAGCCATAATTTATTTGAGTCATTGCTTCATGTATTGTGTTGGTATATATATGCCTTCTATGAAGGTAAAACCTTGAAAGTTAAATAGTTTACTTATACTACTACTTGGAGATTGTTTGCAACAACTAGGAATATGTTGCAATGGGCCAAATAATAAAAGAACTTCTGTGTGCTCAAAAAGATGGGTAGGATGACCTACGAGTGGAAAAAGAGTAAATTGAGGATTGTGTATTTCTTGTTGTGATATGTTACATAGCTTGGTATGCTCCAGGAGCAGTAATTGTTTTCTTGATAAGCCAAATGCGAAGCTCAGGTTTTCTATATCTGAATATCTTTTAGATGAAGCAAAATTTGTGGTGAAATTTTTTATGGTGGTTACTTCTGGCCTGAATTTTCTTATTTAGCTCAGCTCTGCCAATCTAACAACTTTTCCTCTTTGCTTTTATTTAGTTTGACAAGTCATGCTAATTATTTTATGTGAATTTTGTTTAAAGGTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATGGTATTTAGCACTCTTCTCTGTTATTACAAATACATTTCCTGCTCTACCATTGCTCATATCTCCTCTTTCGAGGGCTTTATTTCGCTCATATTTATCGGATGCAATTATAGGCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAGGTAAACGTTACTTCTTAGTTACAGAATTCTGAGGGATGTGTGAGTTACCTATTCTTTATGTTTATTTGATGTATAATCTTCAATTTCAGTTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTGAATACTTTGTATGTTAGTGTAGCATTTCCACTTCAATTTGG</genome_strand>
        <mrna_strand>ATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG..............................................................................................................GCCAACTACATTGCTGCTTTAAATCA.................................................................................................................................................................................................................................................TGA-AGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTG-ATACTTTGTATGTTAGTGTAGCATTTTCACTTCAATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326420" ref_strand="+" ref_description="SGN-U326420        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam domain PF02410: Domain of unknown function DUF143 | chr3:4128414-4129963 FORWARD | Aliases: MGH6.4(evalue: 1e-68, score=257) genbank/nr: gi|18399794|ref|NP_566439.1| expressed protein [Arabidopsis thaliana] gi|15795122|dbj|BAB02500.1| IojAP protein-like [Arabidopsis thaliana] gi|22655076|gb|AAM98129.1| expressed protein [Arabidopsis thaliana] gi|27311971|gb|AAO00951.1| expressed protein [Arabidopsis thaliana](evalue: 8e-67, score=257)">
      <seq>gcaactgagtttccccatacaatcctctcttgtgcagtatcttctaaagttgaaatctcgtatagaaaaatgaaagtacactcctgcattcatcctcttccctctactccctccaccggaattttggtctctgccggtcctgcggaagctaagcttgctgctaacaccagaaagctttattctttaactttgaattcctctaattatgtcccatttccttataaagatcagaaattttccagaagcagctctacggatttttctagaacggctatcggttcgaatgtaagtgaagatacagatgacatgtttgatgatctcctaagaacgcatggcaaagtggtatacaaaagaaatgaccaaaaacctgcaagtgaggagattgatgatgatgctgaaagcctatcgtttgcaatggctgtggctaaagttgcaagtgatgtcaaggctggagatataaaggtcctctttgtcaagcctctagtatattggactcggtttttcattattgctactgcattctctcgcccacagattgatgccattgggaccagagtaagagatatggctgaggaacaatatggaagagttgcttctggagattcaaaacccaactcgtggacactactggactttggtgatgtcgttgttcatctatttcttcctccgcagcgtgagtactacaacctggaagaattctatggcaatgcagcatccatcgaactaccatttgagaaccaacaacaattgcgaggacctactggttattgaagtcccaacagttatggcctcgtggtgattaacagaaagtgtagcaaattatgaggcaatcacagtgttcccccgattgctgacaaggaacgattaacatatctgggcaaactctgttgatccactggttgcgttatttttcttaaattagtagtaagataaagctctctactaagttgtctctgtagaagtattggttaagaaatagtttacaagcattctgaactaataaaggctcattgtcacgtttgatgaaagaacctaacatcctgcttctttttccttgatgtgagttgagtttaaatgaagaatgaggatttaaataaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="+" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="56716" stop="61018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57016" g_stop="57297" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57298" i_stop="58239" i_length="942">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58240" g_stop="58366" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="409" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58367" i_stop="59217" i_length="851">
            <donor d_prob="0.363" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59218" g_stop="59356" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="548" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59357" i_stop="59492" i_length="136">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59493" g_stop="59581" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="637" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59582" i_stop="60258" i_length="677">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60259" g_stop="60717" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="1095" r_length="458" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1096" polyA_stop="1111"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="+" ref_id="SGN-U326420" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1096</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326420" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57016" e_stop="57297"/>
          <exon e_start="58240" e_stop="58366"/>
          <exon e_start="59218" e_stop="59356"/>
          <exon e_start="59493" e_stop="59581"/>
          <exon e_start="60259" e_stop="60717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTGAGTTTCCCCATACAATCCTCTCTTGTGCAGTATCTTCTAAAGTTGAAATCTCGTATAGAAAAATGAAAGTACACTCCTGCATTCATCCTCTTCCCTCTACTCCCTCCACCGGAATTTTGGTCTCTGCCGGTCCTGCGGAAGCTAAGCTTGCTGCTAACACCAGAAAGCTTTATTCTTTAACTTTGAATTCCTCTAATTATGTCCCATTTCCTTATAAAGATCAGAAATTTTCCAGAAGCAGCTCTACGGATTTTTCTAGAACGGCTATCGGTTCGGTATTCCCTAAAACTTCAAGCTTCCGCCCCCCCCCCCCCCCTTTTTTTTTCTTTGTGAAGCTACAGCACTATTTGCAAATTGTTTTGCATTTTGCTGTTGTATTTTGTTGAAAAATTATCCCTTTTGTGGTTCAGAAGGGCATTCTTGTGAATTGAACGCCAATTTCTTATTTGAATTCTACACAAGAACCTGTTAACTAGCCGTCTCAAATTTTATTTTTCTAGTTGCAAAGTATGTTTTGTTGGATTTTCCAGCTAACTCAAATTATAATCTTGTCTTTGCTAATAGAAAGAGGAAGAGTTAACTGCATTTCACTCTTAATACAACTTTACTGCTCCTTCTGAAGACATTGATTAAGAAAATCTGTAGTCTTTGCCTTTATGTTTGGCTGTTGGATTAGTTGTATTAGATATGATAAGGTCTCTGTAAAAGTGAGTGAACTTGGAAAAAGAGATAGTTTATGCTCAAGAAAGTGAATTGTGACATCTTAAGGTTTTTGTATATGTCCAAACTATCTATCTCTCTCTAAAATGTCTCACTTAATGAACACTCCACTAATTGGAGAAACAAGGGTGAATTTTTGGGAGAAAAAGCAATAAATGCTTATTGTTTTTCTAGAACATCCAATATTTTAGAACAAATCCTTTGCCAAAAATGGCAAATATGAACCGGCAGTAGTACTATGTACTTCCCAGAAAAGAGTTTTTTTTCAAGGTGAACAACTACCATAAACTAGCCGACCTCAAGTTGTTTGGATTGAGATATAGTTGTCTGTTTGAACAACTACCTAAACACTGAATATAGTCTTTAGTAGTCTTAGTTCAAAGTCTATTCTTGAGGCTCGTTACGTGTGATTTCTTCTGGTTAGTCTGTGATTCATTATGAATGAATGATAATCTTTCTGCTTGATGCTGCACTTAACATGAATACCTTTGGTACAGAATGTAAGTGAAGATACAGATGACATGTTTGATGATCTCCTAAGAACGCATGGCAAAGTGGTATACAAAAGAAATGACCAAAAACCTGCAAGTGAGGAGATTGATGATGATGCTGAAAGCCTATCGTGTAAGTTGTTCTAAATTGTTAGTTGGATTGACTACTTCTCAGTTGCCGAAGCTTTGAGCCTCGTAGCTTATAGTTTTACTTTTCATGTTGGCCTGTACCTCTTAGCTCATAGTTTTATCTTAGGAACATCGGTTAGTTTTATGATATCCAAGAACGTGTTGACCAACTTTAATTTCATAACTCATGAGCATCTATGTTCTTGTTTTTGTTATTTTCCTTTGGGGAAAAAAGAGTATTTTCCCCTATGATTGATGTACTTACATTATACCTCTATGTAGTGAAAAAATAAGCTGAGAACCCTTTTAGCTTAAAAACCATCCATTTTACTCTCTTAATCAATTCCATACATGTCTCATTTTGTTGTTCCTTCAAAAATCTCATTGAAAATGTCATGAATATCCTCCATTCTTATGTGTAGGAACTCTTTGCATTAAAATGTTCATGTTCTTTCATTGCCCTTCAATCTAGTAGTAGTTCTACCAGAAGGTTTTTGAGATAATATTATTTGTATCAGAACTCTCTAACATAATTTCAAGTTTTTTTACATTGATATAGTTGTTAGTTATATTATAGAATTTAAGGTAGTATAGCCCAAATGTAATCGTAATTTGATTCGCATCATTTTGCTTAATATACTTTTGAGTTGTTTAGGTGACATTTACTGATAATGTTGCTTACTTTTAATGTATATTAGTGGTGAAATATTTTTACCTAAACTACTGAAGCATCATAAACAAACTATAGAAAATTATACAAGATGAAACCCAAAAAAGCACTTTAGAATCTGAGAATATGAATATGATGATTGACTTTAGGCAGAAGTCGTTGACAGTGCTGTTCCCTCTATGCAGTTGCAATGGCTGTGGCTAAAGTTGCAAGTGATGTCAAGGCTGGAGATATAAAGGTCCTCTTTGTCAAGCCTCTAGTATATTGGACTCGGTTTTTCATTATTGCTACTGCATTCTCTCGCCCACAGATTGATGCCATTGGGTATGATATCATATTCTGAGGTTTTCTATTGAATATTAACCAGCAGCAGTATAAATAATCGCAAATGAATAAATAGACGAAGAGGATTGACGATTATTTTTTGTAATTCTGAATTTTCTCTAAATTTCTCATAAAGGACCAGAGTAAGAGATATGGCTGAGGAACAATATGGAAGAGTTGCTTCTGGAGATTCAAAACCCAACTCGTGGACACTACTGGACTTTGGTAAGTAATTCATGGTACTTTAATAGTCCTGCTATTACTTGTGTCATGGCTGAAGAATTTCACTGGATATGAATTTATTATTGCCCTTGTTCTTGATTCACCCCTATTTTTTAATTTCATATGTGGACAAGTGCTGTTAAGGGGCAATATCCTTCTGCACATTAGGATTAGAAGGGAGTAACTTTGTTGTTGACTAACGACTACTTACTGTAACTGTGTTGCTTCACATTGTCCAACATAACTTACCCAAACATAGTGCTTAACTGTTACAAGTTATCAAACCATCAAGCAACTTGCAAAAATCCGTTATTATTCAGTTGAGCAAGAAAAGGAGGTTTAAAGGTTCAAAGCACAGAGATCTCTGACCCAGCCAGAGAAGCATTAGTTTATATCGTGCCCTGCTTCATATGGGTAGTGCTTTTCAAAAATCATCCCATGCATAAGGTTAACATCTGGTTTCAACATGGACTAGCTATCCCAGGGTGGCCAAACATGTTATGGCCAGGGTCAGAAGAAATGTTACCTCCAAAGCTATAAGGACTAAACATGAGTGGTTTGTTTTGATAAGGCGATGCTATATTATGTGCTACTATTTGACCCTTGCAGCAACCATGTACTATGCCATGAAATGTTGTTCTTCTTGCTGATATGTCGCTCCATGCCTCTCTTAATTACAGGTGATGTCGTTGTTCATCTATTTCTTCCTCCGCAGCGTGAGTACTACAACCTGGAAGAATTCTATGGCAATGCAGCATCCATCGAACTACCATTTGAGAACCAACAACAATTGCGAGGACCTACTGGTTATTGAAGTCCCAACAGTTATGGCCTCGTGGTGATTAACAGAAAGTGTAGCAAATTATGAGGCAATCACAGTGTTCCCCCGATTGCTGACAAGGAACGATTAACATATCTGGGCAAACTCTGTTGATCCACTGGTTGCGTTATTTTTCTTAAATTAGTAGTAAGATAAAGCTCTCTACTAAGTTGTCTCTGTAGAAGTATTGGTTAAGAAATAGTTTACAAGCATTCTGAACTAATAAGGGCTCATTGTCACGTTTGATGAAAGAACCTAACATCCTGCTTCTTTTTCCCTTGATGTGAGTTGAGTTTAAATGAAGAATGAGGATTTAAAT</genome_strand>
        <mrna_strand>GCAACTGAGTTTCCCCATACAATCCTCTCTTGTGCAGTATCTTCTAAAGTTGAAATCTCGTATAGAAAAATGAAAGTACACTCCTGCATTCATCCTCTTCCCTCTACTCCCTCCACCGGAATTTTGGTCTCTGCCGGTCCTGCGGAAGCTAAGCTTGCTGCTAACACCAGAAAGCTTTATTCTTTAACTTTGAATTCCTCTAATTATGTCCCATTTCCTTATAAAGATCAGAAATTTTCCAGAAGCAGCTCTACGGATTTTTCTAGAACGGCTATCGGTTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTAAGTGAAGATACAGATGACATGTTTGATGATCTCCTAAGAACGCATGGCAAAGTGGTATACAAAAGAAATGACCAAAAACCTGCAAGTGAGGAGATTGATGATGATGCTGAAAGCCTATCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAATGGCTGTGGCTAAAGTTGCAAGTGATGTCAAGGCTGGAGATATAAAGGTCCTCTTTGTCAAGCCTCTAGTATATTGGACTCGGTTTTTCATTATTGCTACTGCATTCTCTCGCCCACAGATTGATGCCATTGG........................................................................................................................................GACCAGAGTAAGAGATATGGCTGAGGAACAATATGGAAGAGTTGCTTCTGGAGATTCAAAACCCAACTCGTGGACACTACTGGACTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTCGTTGTTCATCTATTTCTTCCTCCGCAGCGTGAGTACTACAACCTGGAAGAATTCTATGGCAATGCAGCATCCATCGAACTACCATTTGAGAACCAACAACAATTGCGAGGACCTACTGGTTATTGAAGTCCCAACAGTTATGGCCTCGTGGTGATTAACAGAAAGTGTAGCAAATTATGAGGCAATCACAGTGTTCCCCCGATTGCTGACAAGGAACGATTAACATATCTGGGCAAACTCTGTTGATCCACTGGTTGCGTTATTTTTCTTAAATTAGTAGTAAGATAAAGCTCTCTACTAAGTTGTCTCTGTAGAAGTATTGGTTAAGAAATAGTTTACAAGCATTCTGAACTAATAAAGGCTCATTGTCACGTTTGATGAAAGAACCTAACATCCTGCTTCTTTTT-CCTTGATGTGAGTTGAGTTTAAATGAAGAATGAGGATTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U321835" ref_strand="+" ref_description="SGN-U321835        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:4130014-4132474 REVERSE | Aliases: MGH6.5(evalue: 0, score=662) genbank/nr: gi|42564109|ref|NP_187900.2| expressed protein [Arabidopsis thaliana] (evalue: 0, score=662)">
      <seq>atggccccaataatttctgtctccggcgatcagctgaacgacggtactggtcctcccttttcgacttgtgcctttttttcgctctattcctctcgcatttggattcctcctctctcgagattgagacctacatgcttggtgaaaccggttgcagtgcaacgtctgcctatggggtatggtctcgagttaatatatttcagcacaagcagtgcaaaatctagaggatttcatggcaggcaatggcctgccagctctgggtcgtgtgaagctcagtgatttggtaccattggaaggtcttccttctgattcgtataaattatctgtctcaactttgtcacagtcattggctcagtattcagctgccattatacagctatccacaagtgatggagctcttttaaggtctagtctagagtctgcccgactttactttcaacacaaaccctcttatcctgcagcggatgttattcattctgatgattctcaggagtggtgtaagacctctggttaccatgcagatcctcaacaatggcaagaaacatatgatttcaggccagggctcactccttcggaacccaccactgaaattgaattccctcctgctggtttggctgacatattctctttgcttggtagagcagcaagggatatattggacgccatcagcttctatttaaatctgcgtagctctccatttactgaaatacttgataatgttccactcagaaatcgagaaacatcatcctctgtattatccgtctgttgtcattccaggccatcttttcagggtgctcagcaccatggcctgacaactcaagaggatggtcatttggggatgttctcggatcatgagcatcaggttgacagaagccttgttacaattgttaagtcggataggcctggtctacatgtaagagattttcatggtcactgggttcttgtggatggtgatcttggcccccaagaagcaattgtttatcctggccttgcattatatcaggcaactgcgggctatatcagccctgcacttcatcggacagacattggtaatcagcagggtagcatatatggacgctgttctctctcttttaaacttatgcccaagtccatgaccaacctcaattgttcagaaatgcgggctgctggtcatggggttgaagctcaattccagcttcccgtaccagttgatgacttcatgcagagatcaactgatcagttgcttaacaggagcaatttccctacattcaactttccaacagtccaagatggatctatgaagcccatgatgaggagaaggaagagtaactcaagatctaaacctcttccaccttcaaagaggttgagattggaggcacaaagagttctcaaagagagagttcaagacatagctgataaaaagggcattaagctgaggttctgcaccttaaaggattgtgaaagtcacatccagtcacttgatagcccatgtacgaacataagaatggaaattggatggccaccgggagttccatttgttcacccacatgatctcccaaataaggctaagattggatttcttgaaacatatgaacctggttggtctgcaactcatgatatggagttgagcctaatcgatcccggacagccaagtcaacacacttctaactgaatctatgttgctatcagaatgctgcctgatgagtgcttggattcattataccaatatttgtctgcttagttatgctcgtctcatgcagatcttgctaatttgtatatgaacttcaattaagatatgaatgcacaatgaactgttcctttgtttatcgtaatcgttgtccctgtacatattagtttgtaaaatttgatggaatattagttgtaaattccgaatgtactcctagttttctcggctctcatatcttagctcttgtggagcattaaatgttggccaaagagtttgaatttatatagtggttggataaaagaagctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="64983" stop="60639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64683" g_stop="64513" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64512" i_stop="64169" i_length="344">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64168" g_stop="63071" g_length="1098"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="1268" r_length="1097" r_score="0.999"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63070" i_stop="61916" i_length="1155">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.860" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61915" g_stop="61538" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1269" r_stop="1646" r_length="378" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61537" i_stop="61252" i_length="286">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61251" g_stop="60918" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1647" r_stop="1980" r_length="334" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U321835" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1981</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64683" e_stop="64513"/>
          <exon e_start="64168" e_stop="63071"/>
          <exon e_start="61915" e_stop="61538"/>
          <exon e_start="61251" e_stop="60918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCCCAATAATTTCTGTCTCCGGCGATCAGCTGAACGACGGTACTGGTCCTCCCTTTTCGACTTGTGCCTTTTTTTCGCTCTATTCCTCTCGCATTTGGATTCCTCCTCTCTCGAGATTGAGACCTACATGCTTGGTGAAACCGGTTGCAGTGCAACGTCTGCCTATGGTGCGTTAAAAAGCCTCAAATTTTTCATCTTCAACCTCAACATTTTTCCTTATTATGCTCCTAAACTTGTCACATATTTATAGCTAAGTTTTTTTTTTTTTTTAATAGGCGATGCCTAGTAGTTGGGTTTAAGGTTTAGTGATGTTAGTATATTGATTGCTAATAGTGTTATTTGTCTGTTTAATATACAGAAATTAAACTCAAATTATTGAGTATAGAATGAAAAAGTTGGTCCAGTAGGGATATTGATACTGAGGGTTCATATAGTCGACCTCAATTGTGAAAGTTGGTTTTTTTATTTCATTTTAATTTCTGAATTGACTGGTTTTCTATTTGTCATTCAGTGGGTATGGTCTCGAGTTAATATATTTCAGCACAAGCAGTGCAAAATCTAGAGGATTTCATGGCAGGCAATGGCCTGCCAGCTCTGGGTCGTGTGAAGCTCAGTGATTTGGTACCATTGGAAGGTCTTCCTTCTGATTCGTATAAATTATCTGTCTCAACTTTGTCACAGTCATTGGCTCAGTATTCAGCTGCCATTATACAGCTATCCACAAGTGATGGAGCTCTTTTAAGGTCTAGTCTAGAGTCTGCCCGACTTTACTTTCAACACAAACCCTCTTATCCTGCAGCGGATGTTATTCATTCTGATGATTCTCAGGAGTGGTGTAAGACCTCTGGTTACCATGCAGATCCTCAACAATGGCAAGAAACATATGATTTCAGGCCAGGGCTCACTCCTTCGGAACCCACCACTGAAATTGAATTCCCTCCTGCTGGTTTGGCTGACATATTCTCTTTGCTTGGTAGAGCAGCAAGGGATATATTGGACGCCATCAGCTTCTATTTAAATCTGCGTAGCTCTCCATTTACTGAAATACTTGATAATGTTCCACTCAGAAATCGAGAAACATCATCCTCTGTATTATCCGTCTGTTGTCATTCCAGGCCATCTTTTCAGGGTGCTCAGCACCATGGCCTGACAACTCAAGAGGATGGTCATTTGGGGATGTTCTCGGATCATGAGCATCAGGTTGACAGAAGCCTTGTTACAATTGTTAAGTCGGATAGGCCTGGTCTACATGTAAGAGATTTTCATGGTCACTGGGTTCTTGTGGATGGTGATCTTGGCCCCCAAGAAGCAATTGTTTATCCTGGCCTTGCATTATATCAGGCAACTGCGGGCTATATCAGCCCTGCACTTCATCGGACAGACATTGGTAATCAGCAGGGTAGCATATATGGACGCTGTTCTCTCTCTTTTAAACTTATGCCCAAGTCCATGACCAACCTCAATTGTTCAGAAATGCGGGCTGCTGGTCATGGGGTTGAAGCTCAATTCCAGCTTCCCGTACCAGTTGATGACTTCATGCAGAGATCAACTGATCAGTTGCTTAACAGGAGCAATTTCCCTACATTCAACTTTCCAACAGTCCAAGATGGTATGACATCCTTTTTTTCTTTTTTCCTATTTGCATTATCAGTATGGAAATGAAAATCTAGAATTATTACGTTTTTGTTTCTATTCTCTTTTTTATATTTAAATGAATTAGTAGACACAATAAGGATAAGGTGACTTAGAATTGGCTTTCATGGATGGTGCTCCCTAATGTTTTCAGTTGGAGGGCCAGTTGACAACTTGATTAGGAAAGTAGGTTGTTCATAATCTTGAAACTTTTGTGGTTTTTTGAAAAATGTGAGTCTAAAGTAGCATCTAGTTAGAGTTATCATGATTATGAGTCCACACAACTAATACCTCCGAACAGATTTTATTTTTTTAGGATGGCAATGTATACATACATATTAAGCACAAAGATTGTGCTGGAAACCAAAACACGGGTGTTACTTCAGAGAAAAGAACCTCAACACAGCATTCCTTCTTCTTCTTCTTACGAGGAATCTAAGACATCTTGACTTGTATTAGGATCATCTATGCACTAAAAACTCAAAAGAAGGATTCAATTCATCTTAAGTTTCTGTAAGGAGCTGTTTGTAGCTTCAAAATATCTTTAATTTCTTTCCTTCCAATCCGAAAAAAGTACTTGGTGTTAATTTTGAAGATTTATTTAGAACAAAAACAAAATGCTGACTGAAGCTGGTGTCTCACGTATGATTGGTCAGAAATATGAAAAGTTTTGTGACAAGCTTAGCCGTTTTTCATAATTAAAAGTGAAAGGTCTTAGTTTTGCTTGTTGAGGACCTGAAGGACTGTTATTATCTCGAATATCTGGAAATGACTTTCAAACATGGTCAAAGTAGATAAAGCAGCCTCTATTGGTTTAATCATGAGTTCAAAAGGTTTCAGATTCTGTAAGTTTCTTTCTGTATCAATGTGAAGGAGGTATCTAGAAGCCGAATTACTTGCAGTTTCAAGTAATGGAACTAAAGAAGGATGCCTTTTTATTTTTACATTTTCTTGTGTTAAATGCTCTCCCATGTTTTTTCGTAATATTGATAGTTTGGTGTTTTTTACTTTTCCTTAAGCAATATATTACTGGCTGGATTTTTTTAACATTGAATTGAGCTCTTTTCTGCTAGTATTCCTTAGTAAGAAGCTTTTAACAACAGGTCCTTGGATCGATGAAATGCTGGTACAGGATCTATGAAGCCCATGATGAGGAGAAGGAAGAGTAACTCAAGATCTAAACCTCTTCCACCTTCAAAGAGGTTGAGATTGGAGGCACAAAGAGTTCTCAAAGAGAGAGTTCAAGACATAGCTGATAAAAAGGGCATTAAGCTGAGGTTCTGCACCTTAAAGGATTGTGAAAGTCACATCCAGTCACTTGATAGCCCATGTACGAACATAAGAATGGAAATTGGATGGCCACCGGGAGTTCCATTTGTTCACCCACATGATCTCCCAAATAAGGCTAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGTCTGCAACTCATGATATGGAGTTGAGCCTAATCGATCCCGGACAGCCAAGTCAACACACTTCTAACTGTAACTATCATTCCCCTAATTATCCTTGTTTTTCTGCATCCGTATCTTTATTTAAGCAGTAGATGTTTCTGGTTTCTTTAGTTGCATATGCATGAGAGATGGCGTATAAGTTCACATCTTTCCTATCTTCTGCATTGGCCATGTTGCTAGTAACAACATTAATCCATTTGAAGAAGCATTTCTGTTCATCTACTCATGCATTCTAGAAGTTTACACCCTCCCTCCCTGTTCTTTTACTTTTACTTTTGGCTCTTGTATATACTGAAAGCAAAAATGTGTTCTGCAGGAATCTATGTTGCTATCAGAATGCTGCCTGATGAGTGCTTGGATTCATTATACCAATATTTGTCTGCTTAGTTATGCTCGTCTCATGCAGATCTTGCTAATTTGTATATGAACTTCAATTAAGATATGAATGCACAATGAACTGTTCCTTTGTTTATCGTAATCGTTGTCCCTGTACATATTAGTTTGTAAAATTTGATGGAATATTAGTTGTAAATTCCGAATGTACTCCTAGTTTTCTCGGCTCTCATATCTTAGCTCTTGTGGAGCATTTTATGTTGGCCAAAGAGTTTGAATTTATATAGTGGTTGGATCTTAGAAGCTAACTTAACTTC</genome_strand>
        <mrna_strand>ATGGCCCCAATAATTTCTGTCTCCGGCGATCAGCTGAACGACGGTACTGGTCCTCCCTTTTCGACTTGTGCCTTTTTTTCGCTCTATTCCTCTCGCATTTGGATTCCTCCTCTCTCGAGATTGAGACCTACATGCTTGGTGAAACCGGTTGCAGTGCAACGTCTGCCTATG........................................................................................................................................................................................................................................................................................................................................................-GGGTATGGTCTCGAGTTAATATATTTCAGCACAAGCAGTGCAAAATCTAGAGGATTTCATGGCAGGCAATGGCCTGCCAGCTCTGGGTCGTGTGAAGCTCAGTGATTTGGTACCATTGGAAGGTCTTCCTTCTGATTCGTATAAATTATCTGTCTCAACTTTGTCACAGTCATTGGCTCAGTATTCAGCTGCCATTATACAGCTATCCACAAGTGATGGAGCTCTTTTAAGGTCTAGTCTAGAGTCTGCCCGACTTTACTTTCAACACAAACCCTCTTATCCTGCAGCGGATGTTATTCATTCTGATGATTCTCAGGAGTGGTGTAAGACCTCTGGTTACCATGCAGATCCTCAACAATGGCAAGAAACATATGATTTCAGGCCAGGGCTCACTCCTTCGGAACCCACCACTGAAATTGAATTCCCTCCTGCTGGTTTGGCTGACATATTCTCTTTGCTTGGTAGAGCAGCAAGGGATATATTGGACGCCATCAGCTTCTATTTAAATCTGCGTAGCTCTCCATTTACTGAAATACTTGATAATGTTCCACTCAGAAATCGAGAAACATCATCCTCTGTATTATCCGTCTGTTGTCATTCCAGGCCATCTTTTCAGGGTGCTCAGCACCATGGCCTGACAACTCAAGAGGATGGTCATTTGGGGATGTTCTCGGATCATGAGCATCAGGTTGACAGAAGCCTTGTTACAATTGTTAAGTCGGATAGGCCTGGTCTACATGTAAGAGATTTTCATGGTCACTGGGTTCTTGTGGATGGTGATCTTGGCCCCCAAGAAGCAATTGTTTATCCTGGCCTTGCATTATATCAGGCAACTGCGGGCTATATCAGCCCTGCACTTCATCGGACAGACATTGGTAATCAGCAGGGTAGCATATATGGACGCTGTTCTCTCTCTTTTAAACTTATGCCCAAGTCCATGACCAACCTCAATTGTTCAGAAATGCGGGCTGCTGGTCATGGGGTTGAAGCTCAATTCCAGCTTCCCGTACCAGTTGATGACTTCATGCAGAGATCAACTGATCAGTTGCTTAACAGGAGCAATTTCCCTACATTCAACTTTCCAACAGTCCAAGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTATGAAGCCCATGATGAGGAGAAGGAAGAGTAACTCAAGATCTAAACCTCTTCCACCTTCAAAGAGGTTGAGATTGGAGGCACAAAGAGTTCTCAAAGAGAGAGTTCAAGACATAGCTGATAAAAAGGGCATTAAGCTGAGGTTCTGCACCTTAAAGGATTGTGAAAGTCACATCCAGTCACTTGATAGCCCATGTACGAACATAAGAATGGAAATTGGATGGCCACCGGGAGTTCCATTTGTTCACCCACATGATCTCCCAAATAAGGCTAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGTCTGCAACTCATGATATGGAGTTGAGCCTAATCGATCCCGGACAGCCAAGTCAACACACTTCTAACT..............................................................................................................................................................................................................................................................................................GAATCTATGTTGCTATCAGAATGCTGCCTGATGAGTGCTTGGATTCATTATACCAATATTTGTCTGCTTAGTTATGCTCGTCTCATGCAGATCTTGCTAATTTGTATATGAACTTCAATTAAGATATGAATGCACAATGAACTGTTCCTTTGTTTATCGTAATCGTTGTCCCTGTACATATTAGTTTGTAAAATTTGATGGAATATTAGTTGTAAATTCCGAATGTACTCCTAGTTTTCTCGGCTCTCATATCTTAGCTCTTGTGGAGCATTAAATGTTGGCCAAAGAGTTTGAATTTATATAGTGGTTGGATAAAAGAAGCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346913" ref_strand="+" ref_description="SGN-U346913        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>agaaaagaacctcaacacagcattccttcttcttcttcttacgaggaatctaagacatcttgacttgtattaggatcatctatgcactaaaaactcaaaagaaggattcaattcatcttaagtttctgtaaggagctgtttgtagcttcaaaatatctttaatttctttccttccaatccgaaaaaagtacttggtgttaattttgaagatttatttagaacaaaaacaaaatgctgactgaagctggtgtctcacgtatgattggtcagaaatatgaaaagttttgtgacaagcttagccgtttttcataattaaaagtgaaaggtcttatttttgcttgttgaggacctgaaggactgttattatctcgaatatctggaaatgactttcaaacatggtcaaagtagataaagcagcctctattggtttaatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="62961" stop="61925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62661" g_stop="62225" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U346913" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62661" e_stop="62225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAGAACCTCAACACAGCATTCCTTCTTCTTCTTCTTACGAGGAATCTAAGACATCTTGACTTGTATTAGGATCATCTATGCACTAAAAACTCAAAAGAAGGATTCAATTCATCTTAAGTTTCTGTAAGGAGCTGTTTGTAGCTTCAAAATATCTTTAATTTCTTTCCTTCCAATCCGAAAAAAGTACTTGGTGTTAATTTTGAAGATTTATTTAGAACAAAAACAAAATGCTGACTGAAGCTGGTGTCTCACGTATGATTGGTCAGAAATATGAAAAGTTTTGTGACAAGCTTAGCCGTTTTTCATAATTAAAAGTGAAAGGTCTTAGTTTTGCTTGTTGAGGACCTGAAGGACTGTTATTATCTCGAATATCTGGAAATGACTTTCAAACATGGTCAAAGTAGATAAAGCAGCCTCTATTGGTTTAATCATG</genome_strand>
        <mrna_strand>AGAAAAGAACCTCAACACAGCATTCCTTCTTCTTCTTCTTACGAGGAATCTAAGACATCTTGACTTGTATTAGGATCATCTATGCACTAAAAACTCAAAAGAAGGATTCAATTCATCTTAAGTTTCTGTAAGGAGCTGTTTGTAGCTTCAAAATATCTTTAATTTCTTTCCTTCCAATCCGAAAAAAGTACTTGGTGTTAATTTTGAAGATTTATTTAGAACAAAAACAAAATGCTGACTGAAGCTGGTGTCTCACGTATGATTGGTCAGAAATATGAAAAGTTTTGTGACAAGCTTAGCCGTTTTTCATAATTAAAAGTGAAAGGTCTTATTTTTGCTTGTTGAGGACCTGAAGGACTGTTATTATCTCGAATATCTGGAAATGACTTTCAAACATGGTCAAAGTAGATAAAGCAGCCTCTATTGGTTTAATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U318131" ref_strand="+" ref_description="SGN-U318131        Tomato 200607 #1 [18 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:14826073-14829044 REVERSE | Aliases: None(evalue: 0, score=749) genbank/nr: gi|50945595|ref|XP_482325.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|51964886|ref|XP_507227.1| PREDICTED P0453D01.16-2 gene product [Oryza sativa (japonica cultivar-group)] >gi|37572952|dbj|BAC98602.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 0, score=769)">
      <seq>tcacactctccaatacctgcagtgaagagaaaaatataatactcttaacactggggcctctcatggcgtagcgtgggtttgactatgtttgcagccttttgttttcctttcccaatttcatatcgagtttaggctgcttgtgtgagaaatatggatcgagcaaggttaaataaaagaacccattgctcaggttcaacaccgtcagaggagtcagccttagatcttgaaaaatactgttgcagttattctaatcttccttcacttagtccaccaacacttcaaccttatgcatcggctggacaacactctgagagtaatgctgcatacttctcctggcctagtcggctaaatgatgctgctgaagagagagcaaactatttcggaaatcttcagaaaggggttttgccagaaactcttggccgattgcccgaggggcagcgagcaacaaccttacttgacctcatgactataagggcatctcatagcaaactcttgcgttgctacagtctcggtacagcaattggttttcgtattcgacgtggtgttttgactgatataccagcaatactagtgtttgtatcccggaaagttcacaaacaatggcttagtccaatccagtgtctacctactgctttagagggccctggaggtgtgtggtgtgaagtggatgtggtcgagttctcctattttggtgcaccagagccaacacccaaggagcagttgtacacagagatagtcgatgacctgcggggtagtgacccatatattggttcaggatctcaggtagcaagccaggagacatatggaaccttgggcgctattgtgaggagtctgtcaggcaatcgacaagttggtttcctaacaaaccggcatgttgctgttgacttagattacccaaatcaaaaaatgtttcatcctttacctccaacattaggacctggagtatatctgggttcagtggagagagctacatcttttatcagagacgacctttggtatggcatatttgctggcataaatccagagacatttgtcagggcagatggtgcattcattcctttcacagatgattttgatatgacctctgttactacttctgttaagggcataggggaaattggagatgtcaaaattatagatttgcaatctcctattagtagtctcatcggaaagcaagtgacgaaggtcggaagaagctctggattgactacaggcactgtcttggcatatgcccttgaatataatgatgagaaagggatttgcttcttgactgattttcttgtcaatggagaaaaccagcagacttttgaccttgaaggagacagtggaagtttaatcgttttgaagggtgagaatggggaaaaaccccgaccaattggtattatttggggtggaactgcaaataggggacggcttaaactaaaggtgggacaatctccagaaaattggactagtggagttgaccttgggcgtctgctcaatttccttgaacttgatatcattaccaaagatgaagctctaaaagttgcagtgcaagaacagagagctgcctctgccacaatggtgggctctacggctggggattcttcacctcctgatataatgcttccaaaggacaaaatagagcctcttgggcttcacattcaacaaattcccttggaagatggcattggtggccctgatataaactcttcacctgtggaagctacatttaacttggaagaaagtgggatcaactttgatgcaagtgttgaacatcaattcattccaagcttcaatgggcaacctccggctaatcaagacgaccatcgtgataagtcagcatacgagaatctctcagctcttaggaaaggctctgatgaagacatcagcttttccttgcagttgggtggtcatgaatccaagagaagacgttcagagcctccaccaagcgcagatgaaccagaatgattttctccttttatctgctggtacatttaactttgaggtcttccatggaaaggaaatgcattttgtgtttggttctaaaacaagaaagaggtccaatttggtttttgaggtgctaaattttcatcatatggccattgatggcaacctgtgtatgaagagttctgtatttgaacatctcagtagtgcaaaatccaattgtaaaatacatgcaagctaaaaatgaggctgctttcttgagctattttgattcatggctccatgcagtagacataaaaatttgcctttgatgtatatttatgctggatatgttaagaaaccaagtgtttatatatatatatatatgtattgcaagtgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="71877" stop="64723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71577" g_stop="71432" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71431" i_stop="70317" i_length="1115">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.806" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70316" g_stop="69824" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="639" r_length="493" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69823" i_stop="69506" i_length="318">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69505" g_stop="69362" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="783" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69361" i_stop="68551" i_length="811">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68550" g_stop="68310" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="784" r_stop="1024" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68309" i_stop="67271" i_length="1039">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67270" g_stop="66770" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1025" r_stop="1525" r_length="501" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66769" i_stop="65804" i_length="966">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65803" g_stop="65028" g_length="776"/>
          <reference_exon_boundary r_type="cDNA" r_start="1526" r_stop="2301" r_length="776" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2305" polyA_stop="2318"/>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U318131" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2301</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71577" e_stop="71432"/>
          <exon e_start="70316" e_stop="69824"/>
          <exon e_start="69505" e_stop="69362"/>
          <exon e_start="68550" e_stop="68310"/>
          <exon e_start="67270" e_stop="66770"/>
          <exon e_start="65803" e_stop="65028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACACTCTCCAATACCTGCAGTGAAGAGAAAAATATAATACTCTTAACACTGGGGCCTCTCATGGCGTAGCGTGGGTTTGACTATGTTTGCAGCCTTTTGTTTTCCTTTCCCAATTTCATATCGAGTTTAGGCTGCTTGTGTGAGGTAAAAAAACTCATCTTTTTTTTCCTCTCGAAGAATCCATCACTATTGCGATTGATCTTCCTTTTTTCACTTTCTCTTCTTCATGCAGAGATATCTTCACACGCCCATGTTTTTTTTTTGAATTTTCCAGGACCCCATTAATTTTGTTCCCTCAATTTGTACTGTGCACAATCGTTATCAAAATAAGTGCTTTTTCAATATTACTGTATTTATTATCCGTTTTTCCTCTCAAGTGTTTCTTTTCACTTTTCCTGTTCCTGGTTTTGTTGCTTTTCCTTGGTTATATATGTTTGGCTGAGAACTTTTTGTTTTTATTTCCGTTGTTGGAGAAATAGGATATATTGGACCTCACCTAGTTTGGGATTGAAGCATAGTTATTGACATATTGTTGATTGATTATGGTTGTTGTTGAACTTATTATCTATTTCTGTTGAGAAAGATACCTGTTTTCTTAGGGCCATGTTGATTGTTGAGGCAGTTTTATCATCTTATGAAGTTCATTCTTTCAGATTTTAAAGTAGCTGAGAGAAATGATGTGATGGATAATATTGTTGTAAGCTGTGGCTAACTAAAGGAAAAAAAAATCTTGCCATGTTTATCTGGTGCTATAACACATTTGATGGATCTAAATAGCTTTCAAATTGCTTACCATTCACTTTATACAGTCTATATTGTCATGACTTGTATTGGACTGGAACAATAAAGTTACTCAAGGCCAGCAGTGCTACAGTTTCTTTTTATCATTTGGATCTTTTCTACAGTCTTCCCTTTGGTGATGTTAACAATATTATATTCAGTGGATATGTGCGTTTTGGCTGTATGGATTTCCATTTTCATTTTTGAGACTGAGTTTACTGGATATTGTTAAATCTTTTAAATAACGTTGCAGCTTTAATTAAAGAAACATGTGAAACAAATTGGAATTTATGCTAAATTATTGCATTGGCCGTTCTCTGTGGTTCGAACACTGTTCTTCCTTTATCAGTTTTGACATAGATTACTAGAGCATACCTCTATGATAGCAAAGATCTTGTCCTTGAAAGTCAGACTTTAGGGTAAATTTTTGGTTTTCTTCCTGTTGGACTTTGAATAACAAGTTTGTCAACTATGAGCAGAAATATGGATCGAGCAAGGTTAAATAAAAGAACCCATTGCTCAGGTTCAACACCGTCAGAGGAGTCAGCCTTAGATCTTGAAAAATACTGTTGCAGTTATTCTAATCTTCCTTCACTTAGTCCACCAACACTTCAACCTTATGCATCGGCTGGACAACACTCTGAGAGTAATGCTGCATACTTCTCCTGGCCTAGTCGGCTAAATGATGCTGCTGAAGAGAGAGCAAACTATTTCGGAAATCTTCAGAAAGGGGTTTTGCCAGAAACTCTTGGCCGATTGCCCGAGGGGCAGCGAGCAACAACCTTACTTGACCTCATGACTATAAGGGCATCTCATAGCAAACTCTTGCGTTGCTACAGTCTCGGTACAGCAATTGGTTTTCGTATTCGACGTGGTGTTTTGACTGATATACCAGCAATACTAGTGTTTGTATCCCGGAAAGTTCACAAACAATGGCTTAGTCCAATCCAGTGTCTACCTACTGCTTTAGAGGTGATCAAAAAGATGCCTAATTATCTCTTATCCTATTTCTGTCACCCTCTCGTGAAAGATTTTCCTGAATTAGGACAAAAAAAGATGACGAGACTTTACTTCCTTATAAAAACAAAAGAGGATGAAATTTACTTCATTGATTTTCTTTTATCTTCTCTTGCTGTATTCCTCCCCGTCACTTTTCCTGATAGGGATTGTTCAATTGTGTGAGTTTAACTATTATTAGAGCCCAAAGAATCAACACTTGCTAACAAATGTTATTCTTGCATCATTTATTCCTTAGTTTTCTCTATGCTTAAATATGTTACTTATCATCAGGGCCCTGGAGGTGTGTGGTGTGAAGTGGATGTGGTCGAGTTCTCCTATTTTGGTGCACCAGAGCCAACACCCAAGGAGCAGTTGTACACAGAGATAGTCGATGACCTGCGGGGTAGTGACCCATATATTGGTTCAGGATCTCAGGTAGTTTGATGTTTATCACAACTTTTCACTCTAAAGATGCTTTGATTGAGTTTTGATGAGTTCATAAGAGAGTTGAAGTCTAAGTCGAGTCCTAGAAAATGTATCAATCAATTTTCAAATCACGTAGGTTGGGCAAATTTATGGCAAGTATTGCTATTTTCATGAGTCTTGTTAGTAGATCGACTCTAAGCATCTTGCATAAAAGTTAAAACAACTATTTGGGTGTGGCAGATCCTTGGAGCCATCTGCTTCTTTGCTTCTGAGCACATTTTGTATTTTTCTGAAGTGCTTATCATTCAGTATCGGAACTGGATTTATGCTTACCATATTTTTCTGAAACTATGCAGCAAGGACAACTTATGTTAGTCTTATGTACTAAAAGGCATCTACTAATTTTGAAAAGGTTGGAAGAAATGGATGATGATTTCCTGTAATGTGTCTAAGAGCCCATAAACTTTATATGTGCACAAAGACACTTTTTAACACCTTTCTCCATTGTTTGGTTAGACTCACATCCTTTCTGAGTGAATTGGTTAGTCATCAAATCAGTTGAGTTCCTTTGAAATCTCCAGCAAAGGTTAAATACATTATAAGGGACTCGGGGAAAGGTTTTGTTTGTCAACAAGTTAGTTGAGCTTCTTTGTTGAGATCTCCAGTCGTTTTTAATTGCATCTTAGGAAGATAAACAATTAAAGAGTCTGCAGAAGAAATCAGATGTAAACTACTTGTTTGGCTTGTCATTTCTTTCTTCCCTAAGGTTATCACTCTGATCGTACATGTTAATTCACCACATTTTATTGGAAACATCTAGGTAGCAAGCCAGGAGACATATGGAACCTTGGGCGCTATTGTGAGGAGTCTGTCAGGCAATCGACAAGTTGGTTTCCTAACAAACCGGCATGTTGCTGTTGACTTAGATTACCCAAATCAAAAAATGTTTCATCCTTTACCTCCAACATTAGGACCTGGAGTATATCTGGGTTCAGTGGAGAGAGCTACATCTTTTATCAGAGACGACCTTTGGTATGGCATATTTGCTGGCATAAATCCAGGTTAAGTGTTTCTTCTTACCTTCTTTACTGATTTATGTTGGAAGGAAGAATGTTCTGATGCTACAAATCATTATTGAAATTCGCTAAATGAATAGTGGATTATGATGTCTCGCCTTGTGCTTTAGTAAATATGTCTTGTGATACTAATCCTTTCTCCATCATCAATTCATATCTATCATTTCTTGGATGGAAGAAGGTTATGTAAAAACTTTGAGATCTCACTAATCAGATTCCATTGTATTGATCCATAAGGTGTTGTATGAAATGAAATATAATCAAATGATAAAAATGAGGTTGTCTTGCTAATGGGGGACAAAGTTAACTGATACCTGTGCTGATGGGAGGTAGCAGGTATCCTGTGGGATTAGTCGAGGTGTGTGCAAGCTGGCCCGCACACCACCTGTTATAAAAGAATATGTTAGACAATGTCTCTTTTGTCCCGTGTGATTATATTTTCATCCTGCCACCACAACATATCATGGATTAAATCAATGTTATCAAAGGCGAAAAGCGCAAAAAAGCTCCAAGGTCCGTGGGGACTTTAAGCTCAAAGCACAAATAAAGCTTGGGCTTTAATTAAAAAAGGCGCAAAAGGAGAAAAAAAACAAATATATATGTTTAGTCCAAAACTAATAATTATAAACATTATGACAAATATATGACCAATGAATTGAAATTTTTTTAGTTATGAAGTGAATTATCAATTGTTTCGTGTCAATTCTTCATAAGAGGTTCATTGTCAAGAAAGTTTGTCTTAGAACCTTGACGACGATACTGAAGCGCATATAAAGCGAGGCGAAGCGCTCAACACATTTTGAGCCTCGCTTTGGGGCTTAAGCGCGCCTTTGATCTGCAAGTGCAACCCATGCTAGAAATCTTCATTTTTGTTTCTTTCTATGTTTTTAGATAGATGAAAAGTTATTCTTTGCGCACTTGCATGTTACCTGCTCTGCTCCTGAAGGTTCTTAATTTGTTAGAGTTATTATTTTTCTTATAGCATTGGTAAGATTTCTAAATGTGGAATTGATTACTCGTGCAGAGACATTTGTCAGGGCAGATGGTGCATTCATTCCTTTCACAGATGATTTTGATATGACCTCTGTTACTACTTCTGTTAAGGGCATAGGGGAAATTGGAGATGTCAAAATTATAGATTTGCAATCTCCTATTAGTAGTCTCATCGGAAAGCAAGTGACGAAGGTCGGAAGAAGCTCTGGATTGACTACAGGCACTGTCTTGGCATATGCCCTTGAATATAATGATGAGAAAGGGATTTGCTTCTTGACTGATTTTCTTGTCAATGGAGAAAACCAGCAGACTTTTGACCTTGAAGGAGACAGTGGAAGTTTAATCGTTTTGAAGGGTGAGAATGGGGAAAAACCCCGACCAATTGGTATTATTTGGGGTGGAACTGCAAATAGGGGACGGCTTAAACTAAAGGTGGGACAATCTCCAGAAAATTGGACTAGTGGAGTTGACCTTGGGCGTCTGCTCAATTTCCTTGAACTTGATATCATTACCAAAGATGAAGCTCTAAAAGGTTTGTGGTCCTCAGCACTTGATTTCTGCCGATAAAGCTAGCTGTTTTTTTCTTTTTTGGTTACATGCACAAAAAATAAATCTCCAATGTGTCCCCCCCTAAATTTATCTTTTACCACTGTGCTTCCTAATTTGTTTATCGGGCATAGGGCTTACAGTTAGTTAGTGATGTTGAGACTTGAGAGTGATACATCCCAAGTTTTTTCAGAGGGGTGGTTGTAGAAGGAAAAACATGTGTGATTTAGAGTGGACGAGAAGCTAAGAAGCTCAATGGATGTCAAGATCTTTAGAATCGTACAGTGAGTTGTTAGATCTAGCTATACTAAATTGGCCTATTAGAAGCCACTTGACAATTGGCTGATTATCTTTCTCTAAGTGAGCAAGTTTCATTGGTTGATATTTTTATCAAAACCATCTCTTCTAGATTTAGTAGTATGTAGTTTGACATTTGTTGAAAAATTTGTGAATGCAAGGAGTTCCAAGAAGGCATGATAAATTGCTTTGTAGAATTAGTTTATTATTATCCCACTGTTTGCACATTAGTTCTCAGGCATCCAGTTGGTCTGTTTAGCTTCATAGTTCAGAAGCACGACTTGTCCTCCTTGAAATGACATGCTCAATTTCCTCTACTGACGTTATTTGGGTAGACGGTATTCCTTTCTTCATTTGTATAATGTTTGTAGGATAGATAAAGCAAGTGAATTCCATCCCTTCTGCTAGCCGTTAGTATTAGCACCACAAGATGGAATAGAACTAAGCTGACTCCCGTTCTTAATCCCAATCCATGGAGACAAAATAATGTCTATTCAAAGTGATGTAGGTTCTGTTGCTTTAAATCCTGTCACATCTGTATGACTTACTCCGACAAATTTACCATTTCATCAAAGTCTCCTCTTTTTCCCGATAAAAAGATCTTCAATTCTTTGAGGGTATGTAATAACCTTGTCTGTGTCTATCACTGGTGTAGTTGCAGTGCAAGAACAGAGAGCTGCCTCTGCCACAATGGTGGGCTCTACGGCTGGGGATTCTTCACCTCCTGATATAATGCTTCCAAAGGACAAAATAGAGCCTCTTGGGCTTCACATTCAACAAATTCCCTTGGAAGATGGCATTGGTGGCCCTGATATAAACTCTTCACCTGTGGAAGCTACATTTAACTTGGAAGAAAGTGGGATCAACTTTGATGCAAGTGTTGAACATCAATTCATTCCAAGCTTCAATGGGCAACCTCCGGCTAATCAAGACGACCATCGTGATAAGTCAGCATACGAGAATCTCTCAGCTCTTAGGAAAGGCTCTGATGAAGACATCAGCTTTTCCTTGCAGTTGGGTGGTCATGAATCCAAGAGAAGACGTTCAGAGCCTCCACCAAGCGCAGATGAACCAGAATGATTTTCTCCTTTTATCTGCTGGTACATTTAACTTTGAGGTCTTCCATGGAAAGGAAATGCATTTTGTGTTTGGTTCTAAAACAAGAAAGAGGTCCAATTTGGTTTTTGAGGTGCTAAATTTTCATCATATGGCCATTGATGGCAACCTGTGTATGAAGAGTTCTGTATTTGAACATCTCAGTAGTGCAAAATCCAATTGTAAAATACATGCAAGCTAAAAATGAGGCTGCTTTCTTGAGCTATTTTGATTCATGGCTCCATGCAGTAGACATAAAAATTTGCCTTTGATGTATATTTATGCTGGATATGTTAAGAAACCAAGTGTTTATATATATATATATATGTATTGCAA</genome_strand>
        <mrna_strand>TCACACTCTCCAATACCTGCAGTGAAGAGAAAAATATAATACTCTTAACACTGGGGCCTCTCATGGCGTAGCGTGGGTTTGACTATGTTTGCAGCCTTTTGTTTTCCTTTCCCAATTTCATATCGAGTTTAGGCTGCTTGTGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATGGATCGAGCAAGGTTAAATAAAAGAACCCATTGCTCAGGTTCAACACCGTCAGAGGAGTCAGCCTTAGATCTTGAAAAATACTGTTGCAGTTATTCTAATCTTCCTTCACTTAGTCCACCAACACTTCAACCTTATGCATCGGCTGGACAACACTCTGAGAGTAATGCTGCATACTTCTCCTGGCCTAGTCGGCTAAATGATGCTGCTGAAGAGAGAGCAAACTATTTCGGAAATCTTCAGAAAGGGGTTTTGCCAGAAACTCTTGGCCGATTGCCCGAGGGGCAGCGAGCAACAACCTTACTTGACCTCATGACTATAAGGGCATCTCATAGCAAACTCTTGCGTTGCTACAGTCTCGGTACAGCAATTGGTTTTCGTATTCGACGTGGTGTTTTGACTGATATACCAGCAATACTAGTGTTTGTATCCCGGAAAGTTCACAAACAATGGCTTAGTCCAATCCAGTGTCTACCTACTGCTTTAGAG..............................................................................................................................................................................................................................................................................................................................GGCCCTGGAGGTGTGTGGTGTGAAGTGGATGTGGTCGAGTTCTCCTATTTTGGTGCACCAGAGCCAACACCCAAGGAGCAGTTGTACACAGAGATAGTCGATGACCTGCGGGGTAGTGACCCATATATTGGTTCAGGATCTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAAGCCAGGAGACATATGGAACCTTGGGCGCTATTGTGAGGAGTCTGTCAGGCAATCGACAAGTTGGTTTCCTAACAAACCGGCATGTTGCTGTTGACTTAGATTACCCAAATCAAAAAATGTTTCATCCTTTACCTCCAACATTAGGACCTGGAGTATATCTGGGTTCAGTGGAGAGAGCTACATCTTTTATCAGAGACGACCTTTGGTATGGCATATTTGCTGGCATAAATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACATTTGTCAGGGCAGATGGTGCATTCATTCCTTTCACAGATGATTTTGATATGACCTCTGTTACTACTTCTGTTAAGGGCATAGGGGAAATTGGAGATGTCAAAATTATAGATTTGCAATCTCCTATTAGTAGTCTCATCGGAAAGCAAGTGACGAAGGTCGGAAGAAGCTCTGGATTGACTACAGGCACTGTCTTGGCATATGCCCTTGAATATAATGATGAGAAAGGGATTTGCTTCTTGACTGATTTTCTTGTCAATGGAGAAAACCAGCAGACTTTTGACCTTGAAGGAGACAGTGGAAGTTTAATCGTTTTGAAGGGTGAGAATGGGGAAAAACCCCGACCAATTGGTATTATTTGGGGTGGAACTGCAAATAGGGGACGGCTTAAACTAAAGGTGGGACAATCTCCAGAAAATTGGACTAGTGGAGTTGACCTTGGGCGTCTGCTCAATTTCCTTGAACTTGATATCATTACCAAAGATGAAGCTCTAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGTGCAAGAACAGAGAGCTGCCTCTGCCACAATGGTGGGCTCTACGGCTGGGGATTCTTCACCTCCTGATATAATGCTTCCAAAGGACAAAATAGAGCCTCTTGGGCTTCACATTCAACAAATTCCCTTGGAAGATGGCATTGGTGGCCCTGATATAAACTCTTCACCTGTGGAAGCTACATTTAACTTGGAAGAAAGTGGGATCAACTTTGATGCAAGTGTTGAACATCAATTCATTCCAAGCTTCAATGGGCAACCTCCGGCTAATCAAGACGACCATCGTGATAAGTCAGCATACGAGAATCTCTCAGCTCTTAGGAAAGGCTCTGATGAAGACATCAGCTTTTCCTTGCAGTTGGGTGGTCATGAATCCAAGAGAAGACGTTCAGAGCCTCCACCAAGCGCAGATGAACCAGAATGATTTTCTCCTTTTATCTGCTGGTACATTTAACTTTGAGGTCTTCCATGGAAAGGAAATGCATTTTGTGTTTGGTTCTAAAACAAGAAAGAGGTCCAATTTGGTTTTTGAGGTGCTAAATTTTCATCATATGGCCATTGATGGCAACCTGTGTATGAAGAGTTCTGTATTTGAACATCTCAGTAGTGCAAAATCCAATTGTAAAATACATGCAAGCTAAAAATGAGGCTGCTTTCTTGAGCTATTTTGATTCATGGCTCCATGCAGTAGACATAAAAATTTGCCTTTGATGTATATTTATGCTGGATATGTTAAGAAACCAAGTGTTTATATATATATATATATGTATTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U342590" ref_strand="+" ref_description="SGN-U342590        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ttttttttcctctcgaagaatccatcactattgcgattgatcttccttttttcactttctcttcttcatgcagagatatcttcacacgcccatgttttttttttgaattttccaggaccccattaattttgttccctcaatttgtactgtgcacaatcgttatcaaaataagtgctttttcaatattactgtatttattatccgtttttcctctcaagtgtttcttttcacttttcctgttcctggatttgatgcttttccttggttatatatgtgtggctgagaactttttgtttttatttccgttgttggagaaatacgatatattggacctcacctagtttgggattgaagcatagttattgacatattgctgattgattatggctgttgttgaacttattatctatttctgttgagaaagatacctgttttcttagggccatgttgattgttgaggcagacctatcatcttatgaaggtcattctttcagattttaaagtagctgatagaaatgatgtgatggataatattgttgtaagctgtggctaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="71716" stop="70562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71416" g_stop="70862" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="555" r_length="555" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U342590" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71416" e_stop="70862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTCCTCTCGAAGAATCCATCACTATTGCGATTGATCTTCCTTTTTTCACTTTCTCTTCTTCATGCAGAGATATCTTCACACGCCCATGTTTTTTTTTTGAATTTTCCAGGACCCCATTAATTTTGTTCCCTCAATTTGTACTGTGCACAATCGTTATCAAAATAAGTGCTTTTTCAATATTACTGTATTTATTATCCGTTTTTCCTCTCAAGTGTTTCTTTTCACTTTTCCTGTTCCTGGTTTTGTTGCTTTTCCTTGGTTATATATGTTTGGCTGAGAACTTTTTGTTTTTATTTCCGTTGTTGGAGAAATAGGATATATTGGACCTCACCTAGTTTGGGATTGAAGCATAGTTATTGACATATTGTTGATTGATTATGGTTGTTGTTGAACTTATTATCTATTTCTGTTGAGAAAGATACCTGTTTTCTTAGGGCCATGTTGATTGTTGAGGCAGTTTTATCATCTTATGAAGTTCATTCTTTCAGATTTTAAAGTAGCTGAGAGAAATGATGTGATGGATAATATTGTTGTAAGCTGTGGCTAACT</genome_strand>
        <mrna_strand>TTTTTTTTCCTCTCGAAGAATCCATCACTATTGCGATTGATCTTCCTTTTTTCACTTTCTCTTCTTCATGCAGAGATATCTTCACACGCCCATGTTTTTTTTTTGAATTTTCCAGGACCCCATTAATTTTGTTCCCTCAATTTGTACTGTGCACAATCGTTATCAAAATAAGTGCTTTTTCAATATTACTGTATTTATTATCCGTTTTTCCTCTCAAGTGTTTCTTTTCACTTTTCCTGTTCCTGGATTTGATGCTTTTCCTTGGTTATATATGTGTGGCTGAGAACTTTTTGTTTTTATTTCCGTTGTTGGAGAAATACGATATATTGGACCTCACCTAGTTTGGGATTGAAGCATAGTTATTGACATATTGCTGATTGATTATGGCTGTTGTTGAACTTATTATCTATTTCTGTTGAGAAAGATACCTGTTTTCTTAGGGCCATGTTGATTGTTGAGGCAGACCTATCATCTTATGAAGGTCATTCTTTCAGATTTTAAAGTAGCTGATAGAAATGATGTGATGGATAATATTGTTGTAAGCTGTGGCTAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Saskqx/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346168" ref_strand="+" ref_description="SGN-U346168        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | auxin-responsive protein-related, similar to indole-3-acetic acid induced protein arg7 (SP:P32295) (Vigna radiata) | chr3:4135507-4136150 REVERSE | Aliases: None(evalue: 5e-16, score=81.6) genbank/nr: gi|21536952|gb|AAM61293.1| unknown [Arabidopsis thaliana](evalue: 4e-14, score=81.6)">
      <seq>tttccatctctgcaatattcatcttctctatatcatattttagtttttttttaattaatgaaaccaagaaggaaggaagaaattaagagaagatgaagaagctgaatttgttattgaggaagtgtaagactttgtcaaggcaactaggaagaagctcatcttatagtagtttaaggtcaaaatctgcaagagaagatttttggaatgtggaagataatatggaagattttgagacaattcttgttggcaactcaagaaggaaatatgtcataaaatcaaaatacttgagccatccactattgaatgctctaatagagaaatcaaagcaaaagcatggggaaaaagatcatctttccgttaagtgtgaagttgtgctttttgatcatcttctctgggtacttgaaaatgctgatcctatcaaccttaattctgattcatttgaggaattggctgatctatatgctgtttaatgtgaataattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0017L19-kjig3/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0017L19.2" temp_strand="-" temp_description="C07SLm0017L19.2  AC210369.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0017L19 upload_account_name:france [organism=Solanum lycopersicum][clone=C07SLm0017L19][chromosome=7]">
        <position start="73221" stop="72140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72921" g_stop="72440" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0017L19.2" gen_strand="-" ref_id="SGN-U346168" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0017L19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72921" e_stop="72440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCATCTCTGCAATATTCATCTTCTCTATATCATATTTAAGTTTTTTTTTAATTAATGAAACCAAGAAGGAAGGAAGAAATTAAGAGAAGATGAAGAAGCTGAATTTGTTATTGAGGAAGTGTAAGACTTTGTCAAGGCAACTAGGAAGAAGCTCATCTTATAGTAGTTTAAGGTCAAAATCTGCAAGAGAAGATTTTTGGAATGTGGAAGATAATATGGAAGATTTTGAGACAATTCTTGTTGGCAACTCAAGAAGGAAATATGTCATAAAATCAAAATACTTGAGCCATCCACTATTGAATGCTCTAATAGAGAAATCAAAGCAAAAGCATGGGGAAAAAGATCATCTTTCCGTTAAGTGTGAAGTTGTGCTTTTTGATCATCTTCTCTGGTTACTTGAAAATGCTGATCCTATCAACCTTAATTCTGATTCATTTGAGGAATTGGCTGATCTATATGTTGTTTAATGTGAATAATTT</genome_strand>
        <mrna_strand>TTTCCATCTCTGCAATATTCATCTTCTCTATATCATATTTTAGTTTTTTTTTAATTAATGAAACCAAGAAGGAAGGAAGAAATTAAGAGAAGATGAAGAAGCTGAATTTGTTATTGAGGAAGTGTAAGACTTTGTCAAGGCAACTAGGAAGAAGCTCATCTTATAGTAGTTTAAGGTCAAAATCTGCAAGAGAAGATTTTTGGAATGTGGAAGATAATATGGAAGATTTTGAGACAATTCTTGTTGGCAACTCAAGAAGGAAATATGTCATAAAATCAAAATACTTGAGCCATCCACTATTGAATGCTCTAATAGAGAAATCAAAGCAAAAGCATGGGGAAAAAGATCATCTTTCCGTTAAGTGTGAAGTTGTGCTTTTTGATCATCTTCTCTGGGTACTTGAAAATGCTGATCCTATCAACCTTAATTCTGATTCATTTGAGGAATTGGCTGATCTATATGCTGTTTAATGTGAATAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>20</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8221" PGL_stop="9674"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8221" e_stop="8408"/>
            <exon e_start="8526" e_stop="8757"/>
            <exon e_start="8847" e_stop="8997"/>
            <exon e_start="9214" e_stop="9674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.882" acc_prob="0.022" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="0.991"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="0.993"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8221" e_stop="8408" e_length="188"/>
          </exon>
          <intron i_serial="1" don_prob="0.882" acc_prob="0.022">
            <gDNA_intron_boundary i_start="8409" i_stop="8525" i_length="117"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="8526" e_stop="8757" e_length="232"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="8758" i_stop="8846" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="8847" e_stop="8997" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8998" i_stop="9213" i_length="216"/>
          </intron>
          <exon e_serial="4" e_score="0.963">
            <gDNA_exon_boundary e_start="9214" e_stop="9674" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8221" stop="8408"/>
              <exon start="8526" stop="8757"/>
              <exon start="8847" stop="8997"/>
              <exon start="9214" stop="9674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGCTGTTAAACAACTGTCTGTGGCATCACACCAAGGAAAGAGTCAGTTTGTGGCCGAGATTGCTACTATATCAGCTGTACAACACCGTAATCTTGTGAAGCTCTATGGTTGCTGCATCGAGGGAGACAGGCGATTACTTGTTTATGAGTACCTTGAAAACAAGAGTCTTGATCAAGCATTATTTG : AGAAAGGATCTCTATATCTTGATTGGCCAACACGCTTCCAGATATGCTTGGGAGTAGCAAAGGGTCTAGCGTATCTTCATGAGGAATCTCGAGTCCGTATTGTCCATCGAGATGTGAAGGCCAGTAATATCCTGCTTGATGCAGATCTAAACCCAAAAATTTCAGACTTTGGATTGGCAAAACTTTATGATGACAAACAGACGCATATAAACACTCGTGTTGCTGGCACAAT : AGGGTATCTTGCACCAGAATATGCCATGCGCGGACATCTGACAGAGAAGGCTGATGTGTTTGGCTTTGGAGTTGTAGCTCTAGAAATTGTCAGTGGTAGAACAAATTCTGATGAGAGCTTGGAAGAAGACAAGATCTACCTTCTTGAGTGG : GCTTGGCAGCTTCATGAGAACAAGCGCGAAACTGAGCTAGTGGATGCAAATTTATCTGAATTTGATGTAGAAGAAGTGAAAAAAGTAATAGGGATAGCTCTACTATGCACTCAAACATCCCCAGGATTACGACCCTCAATGTCCCGTGCAATAGCAATGCTTACAGGAGATGCTGAGGTTGCGGCTGTGACTTCGAGACCTGGATACCTGACTGACTGGAAATTCAAAGATACAACAACCTTCATGAGTGGTCATTCTTCGCAAATGCCAGATTTATCAGTGGGTACAAGTAGAGCCCCAACTACAGGTTATTCACCATCAGGTCAGGACACACCAATGCTCAGTGACATCATTGGAGAGGGTAGATGAAATCTTGCATTTTTCAGTCAGAGATAAACTTTTACCCTTTTGTTTGCATGTATTATAACCATTTGTGTATAGCTTAGATTCTTTCTGCATGT</gDNA_template>
            <first_frame> C  C  C  *  T  T  V  C  G  I  T  P  R  K  E  S  V  C  G  R  D  C  Y  Y  I  S  C  T  T  P  *  S  C  E  A  L  W  L  L  H  R  G  R  Q  A  I  T  C  L  *  V  P  *  K  Q  E  S  *  S  S  I  I  * :   E  R  I  S  I  S  *  L  A  N  T  L  P  D  M  L  G  S  S  K  G  S  S  V  S  S  *  G  I  S  S  P  Y  C  P  S  R  C  E  G  Q  *  Y  P  A  *  C  R  S  K  P  K  N  F  R  L  W  I  G  K  T  L  *  *  Q  T  D  A  Y  K  H  S  C  C  W  H  N  :  R  V  S  C  T  R  I  C  H  A  R  T  S  D  R  E  G  *  C  V  W  L  W  S  C  S  S  R  N  C  Q  W  *  N  K  F  *  *  E  L  G  R  R  Q  D  L  P  S  *  V   : G  L  A  A  S  *  E  Q  A  R  N  *  A  S  G  C  K  F  I  *  I  *  C  R  R  S  E  K  S  N  R  D  S  S  T  M  H  S  N  I  P  R  I  T  T  L  N  V  P  C  N  S  N  A  Y  R  R  C  *  G  C  G  C  D  F  E  T  W  I  P  D  *  L  E  I  Q  R  Y  N  N  L  H  E  W  S  F  F  A  N  A  R  F  I  S  G  Y  K  *  S  P  N  Y  R  L  F  T  I  R  S  G  H  T  N  A  Q  *  H  H  W  R  G  *  M  K  S  C  I  F  Q  S  E  I  N  F  Y  P  F  V  C  M  Y  Y  N  H  L  C  I  A  *  I  L  S  A  C </first_frame>
            <second_frame>  V  A  V  K  Q  L  S  V  A  S  H  Q  G  K  S  Q  F  V  A  E  I  A  T  I  S  A  V  Q  H  R  N  L  V  K  L  Y  G  C  C  I  E  G  D  R  R  L  L  V  Y  E  Y  L  E  N  K  S  L  D  Q  A  L  F   : E  K  G  S  L  Y  L  D  W  P  T  R  F  Q  I  C  L  G  V  A  K  G  L  A  Y  L  H  E  E  S  R  V  R  I  V  H  R  D  V  K  A  S  N  I  L  L  D  A  D  L  N  P  K  I  S  D  F  G  L  A  K  L  Y  D  D  K  Q  T  H  I  N  T  R  V  A  G  T  I :   G  Y  L  A  P  E  Y  A  M  R  G  H  L  T  E  K  A  D  V  F  G  F  G  V  V  A  L  E  I  V  S  G  R  T  N  S  D  E  S  L  E  E  D  K  I  Y  L  L  E  W  :  A  W  Q  L  H  E  N  K  R  E  T  E  L  V  D  A  N  L  S  E  F  D  V  E  E  V  K  K  V  I  G  I  A  L  L  C  T  Q  T  S  P  G  L  R  P  S  M  S  R  A  I  A  M  L  T  G  D  A  E  V  A  A  V  T  S  R  P  G  Y  L  T  D  W  K  F  K  D  T  T  T  F  M  S  G  H  S  S  Q  M  P  D  L  S  V  G  T  S  R  A  P  T  T  G  Y  S  P  S  G  Q  D  T  P  M  L  S  D  I  I  G  E  G  R  *  N  L  A  F  F  S  Q  R  *  T  F  T  L  L  F  A  C  I  I  T  I  C  V  *  L  R  F  F  L  H   </second_frame>
            <third_frame>   L  L  L  N  N  C  L  W  H  H  T  K  E  R  V  S  L  W  P  R  L  L  L  Y  Q  L  Y  N  T  V  I  L  *  S  S  M  V  A  A  S  R  E  T  G  D  Y  L  F  M  S  T  L  K  T  R  V  L  I  K  H  Y  L  :  R  K  D  L  Y  I  L  I  G  Q  H  A  S  R  Y  A  W  E  *  Q  R  V  *  R  I  F  M  R  N  L  E  S  V  L  S  I  E  M  *  R  P  V  I  S  C  L  M  Q  I  *  T  Q  K  F  Q  T  L  D  W  Q  N  F  M  M  T  N  R  R  I  *  T  L  V  L  L  A  Q   : *  G  I  L  H  Q  N  M  P  C  A  D  I  *  Q  R  R  L  M  C  L  A  L  E  L  *  L  *  K  L  S  V  V  E  Q  I  L  M  R  A  W  K  K  T  R  S  T  F  L  S  G :   L  G  S  F  M  R  T  S  A  K  L  S  *  W  M  Q  I  Y  L  N  L  M  *  K  K  *  K  K  *  *  G  *  L  Y  Y  A  L  K  H  P  Q  D  Y  D  P  Q  C  P  V  Q  *  Q  C  L  Q  E  M  L  R  L  R  L  *  L  R  D  L  D  T  *  L  T  G  N  S  K  I  Q  Q  P  S  *  V  V  I  L  R  K  C  Q  I  Y  Q  W  V  Q  V  E  P  Q  L  Q  V  I  H  H  Q  V  R  T  H  Q  C  S  V  T  S  L  E  R  V  D  E  I  L  H  F  S  V  R  D  K  L  L  P  F  C  L  H  V  L  *  P  F  V  Y  S  L  D  S  F  C  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8222" stop="8408"/>
                    <exon start="8526" stop="8757"/>
                    <exon start="8847" stop="8997"/>
                    <exon start="9214" stop="9582"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>936</number_coding_nucleotides>
                  <number_encoded_amino_acids>312</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGDRRLLVYEYLENKSLDQALFEKGSLYLDWPTRFQICLGVAKGLAYLHEESRVRIVHRDVKASNILLDADLNPKISDFGLAKLYDDKQTHINTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRTNSDESLEEDKIYLLEWAWQLHENKRETELVDANLSEFDVEEVKKVIGIALLCTQTSPGLRPSMSRAIAMLTGDAEVAAVTSRPGYLTDWKFKDTTTFMSGHSSQMPDLSVGTSRAPTTGYSPSGQDTPMLSDIIGEGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="10473" PGL_stop="9776"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10473" e_stop="9776"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="10473" e_stop="9776" e_length="698"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10473" stop="9776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342406" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAGTTCAATCATGGAATCCAAGCCCTCACACCCACTTCACCAAATTGCAGAAACCCCAACTCACAAGTTGCTTCTCAAACAATGGCTGAAAGAAGAAGAACTCATCCTCAACAGAATCGCTACCAAAGAAACCCAAATCGATTCCGTCCGCAATGAAATCACTCAGCTCTACTGCATTTTCTTCCTGTTCCATTCGATTTCCCTTATGCTTTTATTCAGTGCTTCCTCCAAATGGGCCTCGAGAACTGGGCTCTGCCACCGTTCATGGATCCCGTCAATCTGTTCTCTCCTCTGTTCTATGGGTATTATTTGGGCTGTTAGGTACAAGACGGATACAGAGAGTCACTTAGAGAAACTGTTGGAGAGAGAGAAAGAGGATGGGAAATTACTGGCAAAGTGTGTGGAGGAGCTGAAGAGAAAAGGGGTGGAATTTGATTTGTTGAAGGAAGTTGATGCTCTTAGGAGGGCTAAGAGCTTGAGGGTTGAAGCTAAGGTGGTTCGAAAATGGTCAGCTAGAGACTTTGTGTCTCTGTTTTTCTTCTCTGTTACTTGCCTGGTACTCGCTTTAACCAGGACCATTTTGTGTAATTGATACTTACTACAACTGAATCGGAAAATTAATTGTGGGGAAGTTACTCTTCTGCTTTTTATATTTTAATTTGATTCTTATTTGGCAATGAATTTTTAACATTTTGG</gDNA_template>
            <first_frame> N  S  S  I  M  E  S  K  P  S  H  P  L  H  Q  I  A  E  T  P  T  H  K  L  L  L  K  Q  W  L  K  E  E  E  L  I  L  N  R  I  A  T  K  E  T  Q  I  D  S  V  R  N  E  I  T  Q  L  Y  C  I  F  F  L  F  H  S  I  S  L  M  L  L  F  S  A  S  S  K  W  A  S  R  T  G  L  C  H  R  S  W  I  P  S  I  C  S  L  L  C  S  M  G  I  I  W  A  V  R  Y  K  T  D  T  E  S  H  L  E  K  L  L  E  R  E  K  E  D  G  K  L  L  A  K  C  V  E  E  L  K  R  K  G  V  E  F  D  L  L  K  E  V  D  A  L  R  R  A  K  S  L  R  V  E  A  K  V  V  R  K  W  S  A  R  D  F  V  S  L  F  F  F  S  V  T  C  L  V  L  A  L  T  R  T  I  L  C  N  *  Y  L  L  Q  L  N  R  K  I  N  C  G  E  V  T  L  L  L  F  I  F  *  F  D  S  Y  L  A  M  N  F  *  H  F   </first_frame>
            <second_frame>  T  V  Q  S  W  N  P  S  P  H  T  H  F  T  K  L  Q  K  P  Q  L  T  S  C  F  S  N  N  G  *  K  K  K  N  S  S  S  T  E  S  L  P  K  K  P  K  S  I  P  S  A  M  K  S  L  S  S  T  A  F  S  S  C  S  I  R  F  P  L  C  F  Y  S  V  L  P  P  N  G  P  R  E  L  G  S  A  T  V  H  G  S  R  Q  S  V  L  S  S  V  L  W  V  L  F  G  L  L  G  T  R  R  I  Q  R  V  T  *  R  N  C  W  R  E  R  K  R  M  G  N  Y  W  Q  S  V  W  R  S  *  R  E  K  G  W  N  L  I  C  *  R  K  L  M  L  L  G  G  L  R  A  *  G  L  K  L  R  W  F  E  N  G  Q  L  E  T  L  C  L  C  F  S  S  L  L  L  A  W  Y  S  L  *  P  G  P  F  C  V  I  D  T  Y  Y  N  *  I  G  K  L  I  V  G  K  L  L  F  C  F  L  Y  F  N  L  I  L  I  W  Q  *  I  F  N  I  L  </second_frame>
            <third_frame>   Q  F  N  H  G  I  Q  A  L  T  P  T  S  P  N  C  R  N  P  N  S  Q  V  A  S  Q  T  M  A  E  R  R  R  T  H  P  Q  Q  N  R  Y  Q  R  N  P  N  R  F  R  P  Q  *  N  H  S  A  L  L  H  F  L  P  V  P  F  D  F  P  Y  A  F  I  Q  C  F  L  Q  M  G  L  E  N  W  A  L  P  P  F  M  D  P  V  N  L  F  S  P  L  F  Y  G  Y  Y  L  G  C  *  V  Q  D  G  Y  R  E  S  L  R  E  T  V  G  E  R  E  R  G  W  E  I  T  G  K  V  C  G  G  A  E  E  K  R  G  G  I  *  F  V  E  G  S  *  C  S  *  E  G  *  E  L  E  G  *  S  *  G  G  S  K  M  V  S  *  R  L  C  V  S  V  F  L  L  C  Y  L  P  G  T  R  F  N  Q  D  H  F  V  *  L  I  L  T  T  T  E  S  E  N  *  L  W  G  S  Y  S  S  A  F  Y  I  L  I  *  F  L  F  G  N  E  F  L  T  F  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10473" stop="9880"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSIMESKPSHPLHQIAETPTHKLLLKQWLKEEELILNRIATKETQIDSVRNEITQLYCIFFLFHSISLMLLFSASSKWASRTGLCHRSWIPSICSLLCSMGIIWAVRYKTDTESHLEKLLEREKEDGKLLAKCVEELKRKGVEFDLLKEVDALRRAKSLRVEAKVVRKWSARDFVSLFFFSVTCLVLALTRTILCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="11599" PGL_stop="14455"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11599" e_stop="11855"/>
            <exon e_start="12236" e_stop="12401"/>
            <exon e_start="14250" e_stop="14385"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.057" e_score="0.988"/>
          <exon-intron don_prob="0.770" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="11599" e_stop="11855" e_length="257"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.057">
            <gDNA_intron_boundary i_start="11856" i_stop="12235" i_length="380"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12236" e_stop="12401" e_length="166"/>
          </exon>
          <intron i_serial="2" don_prob="0.770" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12402" i_stop="14249" i_length="1848"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14250" e_stop="14385" e_length="136"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11599" stop="11855"/>
              <exon start="12236" stop="12401"/>
              <exon start="14250" stop="14385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATTCCCCCAATTTTTCAGATTCAAGTTACTGTTATTCGATTAAATTTCTTCGAATTAGGGTACATACAAACATGGCCTCATCAGCTGCCATCAACAACATCGAAAGAGCTCACCAGATGTACAGGGAAGGTAGATATGCCCAAGCTCTGGGTTTTTATACCGATGCTCTTTCTTTGGCTAAAACAAACTCCCAAAAGATCGCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAG : GTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAG : GCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAATTGA</gDNA_template>
            <first_frame> S  I  P  P  I  F  Q  I  Q  V  T  V  I  R  L  N  F  F  E  L  G  Y  I  Q  T  W  P  H  Q  L  P  S  T  T  S  K  E  L  T  R  C  T  G  K  V  D  M  P  K  L  W  V  F  I  P  M  L  F  L  W  L  K  Q  T  P  K  R  S  L  F  T  V  I  V  L  L  V  S  S  N  F  T  I  S  K  R :   F  L  V  F  L  V  G  W  L  F  I  S  Q  N  T  R  T  W  M  S  S  L  R  S  *  L  I  C  S  S  *  S  E  Y  C  I  G  L  *  Q  R  R  S  Q  D  F  S  E  G  C  S  N  F  E  E  :  A  A  D  E  C  T  L  V  L  E  L  D  Q  K  H  T  G  A  L  M  L  R  A  Q  T  L  V  T  L  K  E  Y  H  S  A  L  F  D  V  N  R  L  I  E  L  </first_frame>
            <second_frame>  Q  F  P  Q  F  F  R  F  K  L  L  L  F  D  *  I  S  S  N  *  G  T  Y  K  H  G  L  I  S  C  H  Q  Q  H  R  K  S  S  P  D  V  Q  G  R  *  I  C  P  S  S  G  F  L  Y  R  C  S  F  F  G  *  N  K  L  P  K  D  R  S  S  Q  *  S  C  C  L  F  P  Q  T  S  R  F  Q  K   : G  S  W  F  S  L  L  V  G  S  L  Y  L  K  I  Q  G  L  G  *  V  A  *  D  L  N  *  F  A  H  H  E  V  N  I  V  L  D  S  S  R  G  V  A  R  I  L  V  K  G  V  R  T  S  K  R :   Q  Q  M  N  A  H  W  C  L  N  L  I  K  N  T  Q  A  R  *  C  C  A  L  K  P  *  S  P  S  R  S  T  I  Q  H  F  L  M  S  T  G  *  L  N  * </second_frame>
            <third_frame>   N  S  P  N  F  S  D  S  S  Y  C  Y  S  I  K  F  L  R  I  R  V  H  T  N  M  A  S  S  A  A  I  N  N  I  E  R  A  H  Q  M  Y  R  E  G  R  Y  A  Q  A  L  G  F  Y  T  D  A  L  S  L  A  K  T  N  S  Q  K  I  A  L  H  S  N  R  A  A  C  F  L  K  L  H  D  F  K  K  :  V  L  G  F  P  C  W  L  A  L  Y  I  S  K  Y  K  D  L  D  E  *  L  K  I  L  T  D  L  L  I  M  K  *  I  L  Y  W  T  L  A  E  A  *  P  G  F  *  *  R  V  F  E  L  R  R   : G  S  R  *  M  H  I  G  A  *  T  *  S  K  T  H  R  R  A  D  V  A  R  S  N  L  S  H  P  Q  G  V  P  F  S  T  F  *  C  Q  Q  V  N  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11599" stop="11855"/>
                    <exon start="12236" stop="12311"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIPPIFQIQVTVIRLNFFELGYIQTWPHQLPSTTSKELTRCTGKVDMPKLWVFIPMLFLWLKQTPKRSLFTVIVLLVSSNFTISKRFLVFLVGWLFISQNTRTWMSSLRS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11601" stop="11855"/>
                    <exon start="12236" stop="12298"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSPNFSDSSYCYSIKFLRIRVHTNMASSAAINNIERAHQMYREGRYAQALGFYTDALSLAKTNSQKIALHSNRAACFLKLHDFKKVLGFPCWLALYISKYKDLDE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="11802" e_stop="12401"/>
            <exon e_start="14250" e_stop="14455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.770" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11802" e_stop="12401" e_length="600"/>
          </exon>
          <intron i_serial="1" don_prob="0.770" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12402" i_stop="14249" i_length="1848"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="14250" e_stop="14455" e_length="206"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11802" stop="12401"/>
              <exon start="14250" stop="14455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322851" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAGGTTACATCTTTATTTATTGAATTACATCAAACATTTGTTCAATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAACAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGCAAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTGGATTGGATACCCCCATAGATAGCAAATCATTGAATCATCTTTTTTGGTTTTCTAGGTTCTTGGTTTTCCTTGTTGGTTGGCTCTTTATATCTCAAAATACAAGGACTTGGATGAGTAGCTTAAGATCTTAACTGATTTGCTCATCATGAAGTGAATATTGTATTGGACTCTAGCAGAGGCGTAGCCAGGATTTTAGTGAAGGGTGTTCGAACTTCGAAGAG : GCAGCAGATGAATGCACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTGATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGGTTAATTGAATTGAATCCATCATCAGAAGTGTATCAAAACCTCCATGCCCGTCTGAAGACACAATTGGTAGTCATTCTGCCTTT</gDNA_template>
            <first_frame> A  L  H  S  N  R  A  A  C  F  L  K  L  H  D  F  K  K  V  T  S  L  F  I  E  L  H  Q  T  F  V  Q  F  D  L  S  N  F  E  L  D  A  L  T  F  L  I  S  N  G  *  L  I  Y  S  A  V  T  P  S  Q  W  *  Q  M  V  A  L  L  E  I  Q  S  F  T  Q  F  S  M  G  Y  K  V  F  S  F  Q  Q  *  H  G  S  N  E  A  K  R  V  I  L  F  P  F  *  T  *  C  L  P  Y  L  L  G  L  *  V  P  N  Q  *  I  N  F  L  F  L  G  L  D  T  P  I  D  S  K  S  L  N  H  L  F  W  F  S  R  F  L  V  F  L  V  G  W  L  F  I  S  Q  N  T  R  T  W  M  S  S  L  R  S  *  L  I  C  S  S  *  S  E  Y  C  I  G  L  *  Q  R  R  S  Q  D  F  S  E  G  C  S  N  F  E  E  :  A  A  D  E  C  T  L  V  L  E  L  D  Q  K  H  T  G  A  L  M  L  R  A  Q  T  L  V  T  L  K  E  Y  H  S  A  L  F  D  V  N  R  L  I  E  L  N  P  S  S  E  V  Y  Q  N  L  H  A  R  L  K  T  Q  L  V  V  I  L  P   </first_frame>
            <second_frame>  L  F  T  V  I  V  L  L  V  S  S  N  F  T  I  S  K  R  L  H  L  Y  L  L  N  Y  I  K  H  L  F  N  S  T  S  Q  T  L  N  L  M  L  *  P  F  *  F  R  M  A  S  *  Y  I  V  L  *  H  H  H  S  G  N  K  W  L  L  F  W  K  F  N  L  L  L  N  S  A  W  V  I  K  F  S  L  F  S  N  N  M  V  Q  M  K  Q  K  G  L  S  F  F  L  F  K  L  N  V  Y  P  T  C  L  D  F  K  F  Q  I  N  K  S  T  F  F  F  L  D  W  I  P  P  *  I  A  N  H  *  I  I  F  F  G  F  L  G  S  W  F  S  L  L  V  G  S  L  Y  L  K  I  Q  G  L  G  *  V  A  *  D  L  N  *  F  A  H  H  E  V  N  I  V  L  D  S  S  R  G  V  A  R  I  L  V  K  G  V  R  T  S  K  R :   Q  Q  M  N  A  H  W  C  L  N  L  I  K  N  T  Q  A  R  *  C  C  A  L  K  P  *  S  P  S  R  S  T  I  Q  H  F  L  M  S  T  G  *  L  N  *  I  H  H  Q  K  C  I  K  T  S  M  P  V  *  R  H  N  W  *  S  F  C  L  </second_frame>
            <third_frame>   S  S  Q  *  S  C  C  L  F  P  Q  T  S  R  F  Q  K  G  Y  I  F  I  Y  *  I  T  S  N  I  C  S  I  R  P  L  K  L  *  T  *  C  F  D  L  S  D  F  E  W  L  V  D  I  *  C  C  D  T  I  T  V  V  T  N  G  C  S  F  G  N  S  I  F  Y  S  I  Q  H  G  L  *  S  F  L  F  S  A  I  T  W  F  K  *  S  K  K  G  Y  P  F  S  F  L  N  L  M  F  T  L  L  A  W  T  L  S  S  K  S  I  N  Q  L  S  F  S  W  I  G  Y  P  H  R  *  Q  I  I  E  S  S  F  L  V  F  *  V  L  G  F  P  C  W  L  A  L  Y  I  S  K  Y  K  D  L  D  E  *  L  K  I  L  T  D  L  L  I  M  K  *  I  L  Y  W  T  L  A  E  A  *  P  G  F  *  *  R  V  F  E  L  R  R   : G  S  R  *  M  H  I  G  A  *  T  *  S  K  T  H  R  R  A  D  V  A  R  S  N  L  S  H  P  Q  G  V  P  F  S  T  F  *  C  Q  Q  V  N  *  I  E  S  I  I  R  S  V  S  K  P  P  C  P  S  E  D  T  I  G  S  H  S  A  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12354" stop="12401"/>
                    <exon start="14250" stop="14453"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRRSQDFSEGCSNFEEAADECTLVLELDQKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHARLKTQLVVILP</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11974" stop="12198"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HHHSGNKWLLFWKFNLLLNSAWVIKFSLFSNNMVQMKQKGLSFFLFKLNVYPTCLDFKFQINKSTFFFLDWIPP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="15062" PGL_stop="15344"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15062" e_stop="15344"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="15062" e_stop="15344" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15062" stop="15344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341536" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGAAGTCAGTGATGTTCCAAAAATGGAATCGTCTGAACAACCGTCGTCTAGCTGGGAAGCAATCCCACAGCCAAAAGGACATTCACGGCTTGACTATTCAAGATGGGATAGGGTTGAAGATGAGTCTAGTGAAGATGACGATGACGATGATGATGACAATGATTCTCAACCTCAGTATAGATTCCGTGTCAAAACTATTGGTGTACGAGCTGTTAAGTAAGACGAAGAAAGTATTTAATGCAAATTGCATGAATTGGGCCATACAATTCTTTGTTGTTTCCT</gDNA_template>
            <first_frame> L  K  S  V  M  F  Q  K  W  N  R  L  N  N  R  R  L  A  G  K  Q  S  H  S  Q  K  D  I  H  G  L  T  I  Q  D  G  I  G  L  K  M  S  L  V  K  M  T  M  T  M  M  M  T  M  I  L  N  L  S  I  D  S  V  S  K  L  L  V  Y  E  L  L  S  K  T  K  K  V  F  N  A  N  C  M  N  W  A  I  Q  F  F  V  V  S  </first_frame>
            <second_frame>  *  S  Q  *  C  S  K  N  G  I  V  *  T  T  V  V  *  L  G  S  N  P  T  A  K  R  T  F  T  A  *  L  F  K  M  G  *  G  *  R  *  V  *  *  R  *  R  *  R  *  *  *  Q  *  F  S  T  S  V  *  I  P  C  Q  N  Y  W  C  T  S  C  *  V  R  R  R  K  Y  L  M  Q  I  A  *  I  G  P  Y  N  S  L  L  F  P </second_frame>
            <third_frame>   E  V  S  D  V  P  K  M  E  S  S  E  Q  P  S  S  S  W  E  A  I  P  Q  P  K  G  H  S  R  L  D  Y  S  R  W  D  R  V  E  D  E  S  S  E  D  D  D  D  D  D  D  D  N  D  S  Q  P  Q  Y  R  F  R  V  K  T  I  G  V  R  A  V  K  *  D  E  E  S  I  *  C  K  L  H  E  L  G  H  T  I  L  C  C  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15062" stop="15343"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKSVMFQKWNRLNNRRLAGKQSHSQKDIHGLTIQDGIGLKMSLVKMTMTMMMTMILNLSIDSVSKLLVYELLSKTKKVFNANCMNWAIQFFVVS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15064" stop="15282"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVSDVPKMESSEQPSSSWEAIPQPKGHSRLDYSRWDRVEDESSEDDDDDDDDNDSQPQYRFRVKTIGVRAVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="16222" PGL_stop="20090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18278" e_stop="18335"/>
            <exon e_start="18421" e_stop="18732"/>
            <exon e_start="19008" e_stop="19053"/>
            <exon e_start="19131" e_stop="19209"/>
            <exon e_start="19321" e_stop="20090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.959" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.283" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18278" e_stop="18335" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.959" acc_prob="0.996">
            <gDNA_intron_boundary i_start="18336" i_stop="18420" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18421" e_stop="18732" e_length="312"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.927">
            <gDNA_intron_boundary i_start="18733" i_stop="19007" i_length="275"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19008" e_stop="19053" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.283">
            <gDNA_intron_boundary i_start="19054" i_stop="19130" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19131" e_stop="19209" e_length="79"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="19321" e_stop="20090" e_length="770"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18278" stop="18335"/>
              <exon start="18421" stop="18732"/>
              <exon start="19008" stop="19053"/>
              <exon start="19131" stop="19209"/>
              <exon start="19321" stop="19590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19554" stop="20090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329950" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACACAGTGCATCATTCTTTCAGTGGTTCTGTAGACGGAAGAGGAAGTAATGGTGACG : CTTCAAAGCACGCTTTGCAAAGGTTTTCCAGCCCTTACATAACACCACTGCTTACTCCAAGTGACACACCAAAAATAGCTTCTGCTAGTGTATCCCCCAGACGATGTTCTGCTGCAGTATCTCCTCGGAGGATATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCGAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAG : CTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAG : GAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAG : GAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTTAAACATTTAACATAAGTCTTGCTTAGTGATCTAAAGTTGACCAAAGGACTTGTGGAACTCTTGATCTATGTTCCAATTTGAGGTGCAGTATCGCTAAACATCAGCTCAAAATCTTTTGAGGTGCAACCTTATAGATTTTCAAACAATTGAGATTGGTACAGATTGTGCTATTGCTAGCTGATGAGTCGATGATCTCATGTTTAAATTCTCATTAAACCATGGATGCATGCTGTAAATTGTTCCCTTCTTTTTCTCTTGTTTCAGTTTTGCATTTTCAATTTTACCGTCACGTGTAGCACATCTGAGAGGAGCGGGTGGTGCCAGCAGATGGCAGTTGAATCAACTCGTAAGTTGAATTTCCTTCTGTTGCTGCTCTCGCTCTTTCATTTGCACGTGTATGGGTATGTATATTTTCTTCTGCTTTACTGTCAGCAGCTTGAAATTTTCTTCTGTGGAGAAATGAGTATCTGCAGTATTGGCACTAGTAGTGTTATCATGCAGACATTAATATGTAAATTGAAGGGTATACTATTGATACTTAGCATCCATAACTAGGAAACGAAAACTCTGATGTTGTAGTTGTATCTGCTGTAAGAATCTAATACAACACACTATCAATTCATTGAATT</gDNA_template>
            <first_frame> Y  T  V  H  H  S  F  S  G  S  V  D  G  R  G  S  N  G  D   : A  S  K  H  A  L  Q  R  F  S  S  P  Y  I  T  P  L  L  T  P  S  D  T  P  K  I  A  S  A  S  V  S  P  R  R  C  S  A  A  V  S  P  R  R  I  S  G  S  T  S  P  T  I  P  Q  F  Q  R  R  T  S  G  S  T  S  P  T  I  P  Q  F  Q  R  R  V  S  M  S  S  F  Y  S  S  S  Q  Q  S  S  Q  Q  S  S  A  A  N  S  P  P  R  A  R  P  K  P   : A  Q  T  P  R  A  D  G  K  E  F  F  R  Q  A  R :   S  R  L  S  Y  E  Q  F  S  A  F  L  A  N  I  K  E  L  N  A  Q  K  Q  S  R  E  :  E  T  L  K  K  A  E  E  I  F  G  T  D  N  K  D  L  Y  L  S  F  Q  G  M  L  N  R  G  V  R  *  Q  Y  K  K  S  S  W  V  Y  I  P  I  L  W  *  L  K  H  L  T  *  V  L  L  S  D  L  K  L  T  K  G  L  V  E  L  L  I  Y  V  P  I  *  G  A  V  S  L  N  I  S  S  K  S  F  E  V  Q  P  Y  R  F  S  N  N  *  D  W  Y  R  L  C  Y  C  *  L  M  S  R  *  S  H  V  *  I  L  I  K  P  W  M  H  A  V  N  C  S  L  L  F  L  L  F  Q  F  C  I  F  N  F  T  V  T  C  S  T  S  E  R  S  G  W  C  Q  Q  M  A  V  E  S  T  R  K  L  N  F  L  L  L  L  L  S  L  F  H  L  H  V  Y  G  Y  V  Y  F  L  L  L  Y  C  Q  Q  L  E  I  F  F  C  G  E  M  S  I  C  S  I  G  T  S  S  V  I  M  Q  T  L  I  C  K  L  K  G  I  L  L  I  L  S  I  H  N  *  E  T  K  T  L  M  L  *  L  Y  L  L  *  E  S  N  T  T  H  Y  Q  F  I  E   </first_frame>
            <second_frame>  T  Q  C  I  I  L  S  V  V  L  *  T  E  E  E  V  M  V  T  :  L  Q  S  T  L  C  K  G  F  P  A  L  T  *  H  H  C  L  L  Q  V  T  H  Q  K  *  L  L  L  V  Y  P  P  D  D  V  L  L  Q  Y  L  L  G  G  Y  L  A  V  P  L  Q  Q  F  L  N  F  N  A  G  H  L  A  V  P  L  Q  Q  F  L  N  F  N  V  E  F  Q  C  H  H  S  I  L  R  V  N  S  R  V  N  S  P  Q  Q  L  T  L  L  Q  G  H  G  Q  N  Q  :  L  K  L  L  E  L  M  G  R  S  S  S  V  K  P   : G  V  V  C  L  M  S  S  S  V  R  F  *  Q  T  *  R  N  *  M  L  K  S  N  L  V  R :   K  L  *  K  K  Q  K  R  F  L  E  R  I  T  R  I  S  I  Y  H  S  K  G  C  L  T  V  V  F  V  D  S  T  K  S  H  L  G  C  I  F  P  S  Y  G  S  L  N  I  *  H  K  S  C  L  V  I  *  S  *  P  K  D  L  W  N  S  *  S  M  F  Q  F  E  V  Q  Y  R  *  T  S  A  Q  N  L  L  R  C  N  L  I  D  F  Q  T  I  E  I  G  T  D  C  A  I  A  S  *  *  V  D  D  L  M  F  K  F  S  L  N  H  G  C  M  L  *  I  V  P  F  F  F  S  C  F  S  F  A  F  S  I  L  P  S  R  V  A  H  L  R  G  A  G  G  A  S  R  W  Q  L  N  Q  L  V  S  *  I  S  F  C  C  C  S  R  S  F  I  C  T  C  M  G  M  Y  I  F  F  C  F  T  V  S  S  L  K  F  S  S  V  E  K  *  V  S  A  V  L  A  L  V  V  L  S  C  R  H  *  Y  V  N  *  R  V  Y  Y  *  Y  L  A  S  I  T  R  K  R  K  L  *  C  C  S  C  I  C  C  K  N  L  I  Q  H  T  I  N  S  L  N  </second_frame>
            <third_frame>   H  S  A  S  F  F  Q  W  F  C  R  R  K  R  K  *  W  *  R :   F  K  A  R  F  A  K  V  F  Q  P  L  H  N  T  T  A  Y  S  K  *  H  T  K  N  S  F  C  *  C  I  P  Q  T  M  F  C  C  S  I  S  S  E  D  I  W  Q  Y  L  S  N  N  S  S  I  S  T  P  D  I  W  Q  Y  L  S  N  N  S  S  I  S  T  S  S  F  N  V  I  I  L  F  F  E  S  T  V  E  S  T  V  L  S  S  *  L  S  S  K  G  T  A  K  T  S :   S  N  S  S  S  *  W  E  G  V  L  P  S  S  Q  :  E  S  S  V  L  *  A  V  Q  C  V  S  S  K  H  K  G  T  K  C  S  K  A  I  S  *   : G  N  F  E  K  S  R  R  D  F  W  N  G  *  Q  G  S  L  S  I  I  P  R  D  A  *  P  W  C  S  L  T  V  Q  K  V  I  L  G  V  Y  S  H  L  M  V  A  *  T  F  N  I  S  L  A  *  *  S  K  V  D  Q  R  T  C  G  T  L  D  L  C  S  N  L  R  C  S  I  A  K  H  Q  L  K  I  F  *  G  A  T  L  *  I  F  K  Q  L  R  L  V  Q  I  V  L  L  L  A  D  E  S  M  I  S  C  L  N  S  H  *  T  M  D  A  C  C  K  L  F  P  S  F  S  L  V  S  V  L  H  F  Q  F  Y  R  H  V  *  H  I  *  E  E  R  V  V  P  A  D  G  S  *  I  N  S  *  V  E  F  P  S  V  A  A  L  A  L  S  F  A  R  V  W  V  C  I  F  S  S  A  L  L  S  A  A  *  N  F  L  L  W  R  N  E  Y  L  Q  Y  W  H  *  *  C  Y  H  A  D  I  N  M  *  I  E  G  Y  T  I  D  T  *  H  P  *  L  G  N  E  N  S  D  V  V  V  V  S  A  V  R  I  *  Y  N  T  L  S  I  H  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18278" stop="18335"/>
                    <exon start="18421" stop="18732"/>
                    <exon start="19008" stop="19053"/>
                    <exon start="19131" stop="19209"/>
                    <exon start="19321" stop="19413"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTVHHSFSGSVDGRGSNGDASKHALQRFSSPYITPLLTPSDTPKIASASVSPRRCSAAVSPRRISGSTSPTIPQFQRRTSGSTSPTIPQFQRRVSMSSFYSSSQQSSQQSSAANSPPRARPKPAQTPRADGKEFFRQARSRLSYEQFSAFLANIKELNAQKQSREETLKKAEEIFGTDNKDLYLSFQGMLNRGVR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19666" stop="20016"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILIKPWMHAVNCSLLFLLFQFCIFNFTVTCSTSERSGWCQQMAVESTRKLNFLLLLLSLFHLHVYGYVYFLLLYCQQLEIFFCGEMSICSIGTSSVIMQTLICKLKGILLILSIHN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18777" e_stop="19209"/>
            <exon e_start="19321" e_stop="19461"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18777" e_stop="19209" e_length="433"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19321" e_stop="19461" e_length="141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18777" stop="19209"/>
              <exon start="19321" stop="19461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTATACAAATGTTACTGCTGTAGATGTCGTTACACACATTGAGAGTCATTCTTTATATGAGATGCAAACTTGTGTTGACTCCAATATTTACATTATATACACAATTTTGCTTTAGTGTAAGAATGATTCTATACGTGTGTAACAAACACTCAACAACTTTTGCTAGCTGATATTGTTTCCTTTTGGACAAATTGTTTATTACTAATTAGTTCATGTATGTGAATTTTAAGCTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAGGTATCTAAATCTTTGACTTTTGTTCTTTTTAATTTTTTTGAGTAAACGATCCTGATGACCAGCATGTGTTGACTCAGGAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAG : GAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATTCCAAGGGATGCTTAACCGTGGTGTTCGTTGACAGTACAAAAAGTCATCTTGGGTGTATATTCCCATCTTATGGTAGCTT</gDNA_template>
            <first_frame> L  I  Q  M  L  L  L  *  M  S  L  H  T  L  R  V  I  L  Y  M  R  C  K  L  V  L  T  P  I  F  T  L  Y  T  Q  F  C  F  S  V  R  M  I  L  Y  V  C  N  K  H  S  T  T  F  A  S  *  Y  C  F  L  L  D  K  L  F  I  T  N  *  F  M  Y  V  N  F  K  L  K  L  L  E  L  M  G  R  S  S  S  V  K  P  G  I  *  I  F  D  F  C  S  F  *  F  F  *  V  N  D  P  D  D  Q  H  V  L  T  Q  E  S  S  V  L  *  A  V  Q  C  V  S  S  K  H  K  G  T  K  C  S  K  A  I  S  *   : G  N  F  E  K  S  R  R  D  F  W  N  G  *  Q  G  S  L  S  I  I  P  R  D  A  *  P  W  C  S  L  T  V  Q  K  V  I  L  G  V  Y  S  H  L  M  V  A  </first_frame>
            <second_frame>  L  Y  K  C  Y  C  C  R  C  R  Y  T  H  *  E  S  F  F  I  *  D  A  N  L  C  *  L  Q  Y  L  H  Y  I  H  N  F  A  L  V  *  E  *  F  Y  T  C  V  T  N  T  Q  Q  L  L  L  A  D  I  V  S  F  W  T  N  C  L  L  L  I  S  S  C  M  *  I  L  S  S  N  S  S  S  *  W  E  G  V  L  P  S  S  Q  V  S  K  S  L  T  F  V  L  F  N  F  F  E  *  T  I  L  M  T  S  M  C  *  L  R  S  R  L  S  Y  E  Q  F  S  A  F  L  A  N  I  K  E  L  N  A  Q  K  Q  S  R  E  :  E  T  L  K  K  A  E  E  I  F  G  T  D  N  K  D  L  Y  L  S  F  Q  G  M  L  N  R  G  V  R  *  Q  Y  K  K  S  S  W  V  Y  I  P  I  L  W  *  L </second_frame>
            <third_frame>   Y  T  N  V  T  A  V  D  V  V  T  H  I  E  S  H  S  L  Y  E  M  Q  T  C  V  D  S  N  I  Y  I  I  Y  T  I  L  L  *  C  K  N  D  S  I  R  V  *  Q  T  L  N  N  F  C  *  L  I  L  F  P  F  G  Q  I  V  Y  Y  *  L  V  H  V  C  E  F  *  A  Q  T  P  R  A  D  G  K  E  F  F  R  Q  A  R  Y  L  N  L  *  L  L  F  F  L  I  F  L  S  K  R  S  *  *  P  A  C  V  D  S  G  V  V  C  L  M  S  S  S  V  R  F  *  Q  T  *  R  N  *  M  L  K  S  N  L  V  R :   K  L  *  K  K  Q  K  R  F  L  E  R  I  T  R  I  S  I  Y  H  S  K  G  C  L  T  V  V  F  V  D  S  T  K  S  H  L  G  C  I  F  P  S  Y  G  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0017L19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16231" e_stop="16304"/>
            <exon e_start="18451" e_stop="18732"/>
            <exon e_start="19008" e_stop="19053"/>
            <exon e_start="19131" e_stop="19209"/>
            <exon e_start="19321" e_stop="19382"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.892"/>
          <exon-intron don_prob="0.990" acc_prob="0.927" e_score="0.940"/>
          <exon-intron don_prob="1.000" acc_prob="0.283" e_score="0.957"/>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="0.937"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.892">
            <gDNA_exon_boundary e_start="16231" e_stop="16304" e_length="74"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="16305" i_stop="18450" i_length="2146"/>
          </intron>
          <exon e_serial="2" e_score="0.940">
            <gDNA_exon_boundary e_start="18451" e_stop="18732" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.927">
            <gDNA_intron_boundary i_start="18733" i_stop="19007" i_length="275"/>
          </intron>
          <exon e_serial="3" e_score="0.957">
            <gDNA_exon_boundary e_start="19008" e_stop="19053" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.283">
            <gDNA_intron_boundary i_start="19054" i_stop="19130" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.937">
            <gDNA_exon_boundary e_start="19131" e_stop="19209" e_length="79"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="19210" i_stop="19320" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="0.935">
            <gDNA_exon_boundary e_start="19321" e_stop="19382" e_length="62"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16231" stop="16304"/>
              <exon start="18451" stop="18732"/>
              <exon start="19008" stop="19053"/>
              <exon start="19131" stop="19209"/>
              <exon start="19321" stop="19382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336920" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTCCATTTCCAAACCCCATTTTCTCAGAAATTAGGGTTTGGAGATGTCGGACAACAGCATCATTGAAAGCA : GCCCTTACATAACACCACTGCTTACTCCAAGTGACACACCAAAAATAGCTTCTGCTAGTGTATCCCCCAGACGATGTTCTGCTGCAGTATCTCCTCGGAGGATATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGCCGGACATCTGGCAGTACCTCTCCAACAATTCCTCAATTTCAACGTCGAGTTTCAATGTCATCATTCTATTCTTCGAGTCAACAGTCGAGTCAACAGTCCTCAGCAGCTAACTCTCCTCCAAGGGCACGGCCAAAACCAG : CTCAAACTCCTCGAGCTGATGGGAAGGAGTTCTTCCGTCAAGCCAG : GAGTCGTCTGTCTTATGAGCAGTTCAGTGCGTTTCTAGCAAACATAAAGGAACTAAATGCTCAAAAGCAATCTCGTGAG : GAAACTTTGAAAAAAGCAGAAGAGATTTTTGGAACGGATAACAAGGATCTCTATCTATCATT</gDNA_template>
            <first_frame> F  L  H  F  Q  T  P  F  S  Q  K  L  G  F  G  D  V  G  Q  Q  H  H  *  K  Q :   P  L  H  N  T  T  A  Y  S  K  *  H  T  K  N  S  F  C  *  C  I  P  Q  T  M  F  C  C  S  I  S  S  E  D  I  W  Q  Y  L  S  N  N  S  S  I  S  T  P  D  I  W  Q  Y  L  S  N  N  S  S  I  S  T  S  S  F  N  V  I  I  L  F  F  E  S  T  V  E  S  T  V  L  S  S  *  L  S  S  K  G  T  A  K  T  S :   S  N  S  S  S  *  W  E  G  V  L  P  S  S  Q  :  E  S  S  V  L  *  A  V  Q  C  V  S  S  K  H  K  G  T  K  C  S  K  A  I  S  *   : G  N  F  E  K  S  R  R  D  F  W  N  G  *  Q  G  S  L  S  I  I </first_frame>
            <second_frame>  F  S  I  S  K  P  H  F  L  R  N  *  G  L  E  M  S  D  N  S  I  I  E  S   : S  P  Y  I  T  P  L  L  T  P  S  D  T  P  K  I  A  S  A  S  V  S  P  R  R  C  S  A  A  V  S  P  R  R  I  S  G  S  T  S  P  T  I  P  Q  F  Q  R  R  T  S  G  S  T  S  P  T  I  P  Q  F  Q  R  R  V  S  M  S  S  F  Y  S  S  S  Q  Q  S  S  Q  Q  S  S  A  A  N  S  P  P  R  A  R  P  K  P   : A  Q  T  P  R  A  D  G  K  E  F  F  R  Q  A  R :   S  R  L  S  Y  E  Q  F  S  A  F  L  A  N  I  K  E  L  N  A  Q  K  Q  S  R  E  :  E  T  L  K  K  A  E  E  I  F  G  T  D  N  K  D  L  Y  L  S   </second_frame>
            <third_frame>   S  P  F  P  N  P  I  F  S  E  I  R  V  W  R  C  R  T  T  A  S  L  K  A  :  A  L  T  *  H  H  C  L  L  Q  V  T  H  Q  K  *  L  L  L  V  Y  P  P  D  D  V  L  L  Q  Y  L  L  G  G  Y  L  A  V  P  L  Q  Q  F  L  N  F  N  A  G  H  L  A  V  P  L  Q  Q  F  L  N  F  N  V  E  F  Q  C  H  H  S  I  L  R  V  N  S  R  V  N  S  P  Q  Q  L  T  L  L  Q  G  H  G  Q  N  Q  :  L  K  L  L  E  L  M  G  R  S  S  S  V  K  P   : G  V  V  C  L  M  S  S  S  V  R  F  *  Q  T  *  R  N  *  M  L  K  S  N  L  V  R :   K  L  *  K  K  Q  K  R  F  L  E  R  I  T  R  I  S  I  Y  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16268" stop="16304"/>
                    <exon start="18451" stop="18732"/>
                    <exon start="19008" stop="19053"/>
                    <exon start="19131" stop="19209"/>
                    <exon start="19321" stop="19380"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLEMSDNSIIESSPYITPLLTPSDTPKIASASVSPRRCSAAVSPRRISGSTSPTIPQFQRRTSGSTSPTIPQFQRRVSMSSFYSSSQQSSQQSSAANSPPRARPKPAQTPRADGKEFFRQARSRLSYEQFSAFLANIKELNAQKQSREETLKKAEEIFGTDNKDLYLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="16222" e_stop="16573"/>
            <exon e_start="16673" e_stop="16741"/>
            <exon e_start="17758" e_stop="17811"/>
            <exon e_start="18065" e_stop="18103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.989" e_score="0.991"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="0.971"/>
          <exon-intron don_prob="0.967" acc_prob="0.993" e_score="0.981"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="16222" e_stop="16573" e_length="352"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.989">
            <gDNA_intron_boundary i_start="16574" i_stop="16672" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="16673" e_stop="16741" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="16742" i_stop="17757" i_length="1016"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="17758" e_stop="17811" e_length="54"/>
          </exon>
          <intron i_serial="3" don_prob="0.967" acc_prob="0.993">
            <gDNA_intron_boundary i_start="17812" i_stop="18064" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18065" e_stop="18103" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16222" stop="16573"/>
              <exon start="16673" stop="16741"/>
              <exon start="17758" stop="17811"/>
              <exon start="18065" stop="18103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336921" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACACACATTTCTCCATTTCCAAACCCCATTTTCTCAGAAATTAGGGTTTGGAGATGTCGGACAACAGCATCATTGAAAGCAGTCGGAATGCCGGCCCGGATTTTTACCTTCCCGATGAAATACTTTCTGTTATTCCGACGGACCCATATGACCAATTGGACCTTGCCCGGAAGATCACCTCCATGGCAATCGCTTCTCGCGTTACAAGTCTGGAGTCTGACATGGACAGGCTCCGGCAGAATCTTAACGGAAAGGATCGCCTCATCCTCGACCTCGAGGATAAGGTCTCTCAGCTCGAAAACGCCTGTCACCAGGCCGAATTGCGATTGAACATCACCCTCCAAGATAAT : ATGAAACTGTCGAAGGAGAGAGATAATCTGGCTATTACTGCAAAGAAGCTTGGTCGTGACTTAGCAAAG : TTGGAGACCTTTAAAAGGCAATTGGTGCAGTCTTTGAGTGATGATGACTCATCT : CAAGCTGAAACTGTAGATATTGGCATTTATGATCAATCT</gDNA_template>
            <first_frame> S  H  T  F  L  H  F  Q  T  P  F  S  Q  K  L  G  F  G  D  V  G  Q  Q  H  H  *  K  Q  S  E  C  R  P  G  F  L  P  S  R  *  N  T  F  C  Y  S  D  G  P  I  *  P  I  G  P  C  P  E  D  H  L  H  G  N  R  F  S  R  Y  K  S  G  V  *  H  G  Q  A  P  A  E  S  *  R  K  G  S  P  H  P  R  P  R  G  *  G  L  S  A  R  K  R  L  S  P  G  R  I  A  I  E  H  H  P  P  R  *   : Y  E  T  V  E  G  E  R  *  S  G  Y  Y  C  K  E  A  W  S  *  L  S  K   : V  G  D  L  *  K  A  I  G  A  V  F  E  *  *  *  L  I   : S  S  *  N  C  R  Y  W  H  L  *  S  I  </first_frame>
            <second_frame>  H  T  H  F  S  I  S  K  P  H  F  L  R  N  *  G  L  E  M  S  D  N  S  I  I  E  S  S  R  N  A  G  P  D  F  Y  L  P  D  E  I  L  S  V  I  P  T  D  P  Y  D  Q  L  D  L  A  R  K  I  T  S  M  A  I  A  S  R  V  T  S  L  E  S  D  M  D  R  L  R  Q  N  L  N  G  K  D  R  L  I  L  D  L  E  D  K  V  S  Q  L  E  N  A  C  H  Q  A  E  L  R  L  N  I  T  L  Q  D  N  :  M  K  L  S  K  E  R  D  N  L  A  I  T  A  K  K  L  G  R  D  L  A  K  :  L  E  T  F  K  R  Q  L  V  Q  S  L  S  D  D  D  S  S  :  Q  A  E  T  V  D  I  G  I  Y  D  Q  S </second_frame>
            <third_frame>   T  H  I  S  P  F  P  N  P  I  F  S  E  I  R  V  W  R  C  R  T  T  A  S  L  K  A  V  G  M  P  A  R  I  F  T  F  P  M  K  Y  F  L  L  F  R  R  T  H  M  T  N  W  T  L  P  G  R  S  P  P  W  Q  S  L  L  A  L  Q  V  W  S  L  T  W  T  G  S  G  R  I  L  T  E  R  I  A  S  S  S  T  S  R  I  R  S  L  S  S  K  T  P  V  T  R  P  N  C  D  *  T  S  P  S  K  I  I :   *  N  C  R  R  R  E  I  I  W  L  L  L  Q  R  S  L  V  V  T  *  Q  S :   W  R  P  L  K  G  N  W  C  S  L  *  V  M  M  T  H  L :   K  L  K  L  *  I  L  A  F  M  I  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16268" stop="16573"/>
                    <exon start="16673" stop="16741"/>
                    <exon start="17758" stop="17811"/>
                    <exon start="18065" stop="18103"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLEMSDNSIIESSRNAGPDFYLPDEILSVIPTDPYDQLDLARKITSMAIASRVTSLESDMDRLRQNLNGKDRLILDLEDKVSQLENACHQAELRLNITLQDNMKLSKERDNLAITAKKLGRDLAKLETFKRQLVQSLSDDDSSQAETVDIGIYDQS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="38600" PGL_stop="50741"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38600" e_stop="38775"/>
            <exon e_start="38853" e_stop="38951"/>
            <exon e_start="39063" e_stop="39121"/>
            <exon e_start="39350" e_stop="39510"/>
            <exon e_start="40394" e_stop="40545"/>
            <exon e_start="40835" e_stop="40961"/>
            <exon e_start="41491" e_stop="41593"/>
            <exon e_start="41717" e_stop="41762"/>
            <exon e_start="42039" e_stop="42077"/>
            <exon e_start="42157" e_stop="42313"/>
            <exon e_start="43016" e_stop="43103"/>
            <exon e_start="43442" e_stop="43558"/>
            <exon e_start="44438" e_stop="44515"/>
            <exon e_start="44605" e_stop="44706"/>
            <exon e_start="45456" e_stop="45546"/>
            <exon e_start="45717" e_stop="45821"/>
            <exon e_start="46021" e_stop="46085"/>
            <exon e_start="46993" e_stop="47144"/>
            <exon e_start="48781" e_stop="49013"/>
            <exon e_start="49541" e_stop="49677"/>
            <exon e_start="49837" e_stop="49947"/>
            <exon e_start="50041" e_stop="50741"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.983"/>
          <exon-intron don_prob="0.990" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.797" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.490" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.817" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.901" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.903" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.654" acc_prob="0.744" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.480" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="0.993"/>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.891" e_score="0.993"/>
          <exon-intron don_prob="0.201" acc_prob="0.895" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="38600" e_stop="38775" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="38776" i_stop="38852" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38853" e_stop="38951" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.895">
            <gDNA_intron_boundary i_start="38952" i_stop="39062" i_length="111"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39063" e_stop="39121" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.797">
            <gDNA_intron_boundary i_start="39122" i_stop="39349" i_length="228"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39350" e_stop="39510" e_length="161"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.490">
            <gDNA_intron_boundary i_start="39511" i_stop="40393" i_length="883"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="40394" e_stop="40545" e_length="152"/>
          </exon>
          <intron i_serial="5" don_prob="0.934" acc_prob="0.979">
            <gDNA_intron_boundary i_start="40546" i_stop="40834" i_length="289"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="40835" e_stop="40961" e_length="127"/>
          </exon>
          <intron i_serial="6" don_prob="0.952" acc_prob="0.959">
            <gDNA_intron_boundary i_start="40962" i_stop="41490" i_length="529"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="41491" e_stop="41593" e_length="103"/>
          </exon>
          <intron i_serial="7" don_prob="0.817" acc_prob="0.967">
            <gDNA_intron_boundary i_start="41594" i_stop="41716" i_length="123"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="41717" e_stop="41762" e_length="46"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="0.989">
            <gDNA_intron_boundary i_start="41763" i_stop="42038" i_length="276"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="42039" e_stop="42077" e_length="39"/>
          </exon>
          <intron i_serial="9" don_prob="0.901" acc_prob="0.990">
            <gDNA_intron_boundary i_start="42078" i_stop="42156" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="42157" e_stop="42313" e_length="157"/>
          </exon>
          <intron i_serial="10" don_prob="0.960" acc_prob="0.903">
            <gDNA_intron_boundary i_start="42314" i_stop="43015" i_length="702"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="43016" e_stop="43103" e_length="88"/>
          </exon>
          <intron i_serial="11" don_prob="0.959" acc_prob="0.938">
            <gDNA_intron_boundary i_start="43104" i_stop="43441" i_length="338"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="43442" e_stop="43558" e_length="117"/>
          </exon>
          <intron i_serial="12" don_prob="0.975" acc_prob="0.768">
            <gDNA_intron_boundary i_start="43559" i_stop="44437" i_length="879"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="44438" e_stop="44515" e_length="78"/>
          </exon>
          <intron i_serial="13" don_prob="0.992" acc_prob="0.766">
            <gDNA_intron_boundary i_start="44516" i_stop="44604" i_length="89"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="44605" e_stop="44706" e_length="102"/>
          </exon>
          <intron i_serial="14" don_prob="0.654" acc_prob="0.744">
            <gDNA_intron_boundary i_start="44707" i_stop="45455" i_length="749"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="45456" e_stop="45546" e_length="91"/>
          </exon>
          <intron i_serial="15" don_prob="0.966" acc_prob="0.934">
            <gDNA_intron_boundary i_start="45547" i_stop="45716" i_length="170"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="45717" e_stop="45821" e_length="105"/>
          </exon>
          <intron i_serial="16" don_prob="0.480" acc_prob="0.941">
            <gDNA_intron_boundary i_start="45822" i_stop="46020" i_length="199"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="46021" e_stop="46085" e_length="65"/>
          </exon>
          <intron i_serial="17" don_prob="0.989" acc_prob="0.874">
            <gDNA_intron_boundary i_start="46086" i_stop="46992" i_length="907"/>
          </intron>
          <exon e_serial="18" e_score="0.993">
            <gDNA_exon_boundary e_start="46993" e_stop="47144" e_length="152"/>
          </exon>
          <intron i_serial="18" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="47145" i_stop="48780" i_length="1636"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="48781" e_stop="49013" e_length="233"/>
          </exon>
          <intron i_serial="19" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="49014" i_stop="49540" i_length="527"/>
          </intron>
          <exon e_serial="20" e_score="0.993">
            <gDNA_exon_boundary e_start="49541" e_stop="49677" e_length="137"/>
          </exon>
          <intron i_serial="20" don_prob="0.967" acc_prob="0.891">
            <gDNA_intron_boundary i_start="49678" i_stop="49836" i_length="159"/>
          </intron>
          <exon e_serial="21" e_score="1.000">
            <gDNA_exon_boundary e_start="49837" e_stop="49947" e_length="111"/>
          </exon>
          <intron i_serial="21" don_prob="0.201" acc_prob="0.895">
            <gDNA_intron_boundary i_start="49948" i_stop="50040" i_length="93"/>
          </intron>
          <exon e_serial="22" e_score="1.000">
            <gDNA_exon_boundary e_start="50041" e_stop="50741" e_length="701"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38600" stop="38775"/>
              <exon start="38853" stop="38951"/>
              <exon start="39063" stop="39121"/>
              <exon start="39350" stop="39510"/>
              <exon start="40394" stop="40545"/>
              <exon start="40835" stop="40961"/>
              <exon start="41491" stop="41593"/>
              <exon start="41717" stop="41762"/>
              <exon start="42039" stop="42077"/>
              <exon start="42157" stop="42313"/>
              <exon start="43016" stop="43103"/>
              <exon start="43442" stop="43558"/>
              <exon start="44438" stop="44515"/>
              <exon start="44605" stop="44706"/>
              <exon start="45456" stop="45546"/>
              <exon start="45717" stop="45821"/>
              <exon start="46021" stop="46085"/>
              <exon start="46993" stop="47144"/>
              <exon start="48781" stop="49013"/>
              <exon start="49541" stop="49677"/>
              <exon start="49837" stop="49947"/>
              <exon start="50041" stop="50741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327081" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTCATTTGAGTTTGTTCCGGGCTTGAGTAAGAAATTCCAATCGCAACCGCTGCAAAATGAACATCGAATCGGAGAAAGAGCAATTTCTGAAGGAATTTGGAAGCTATTATGGTTATGCCAATTCCCCCAAAAACATTGATGAAATTAGAGCTACTGAATTTAAGCGCTTAAACG : ATACGGTATACTTGGATCATGCTGGGGCGACTCTCTATTCCGAGTCTCAAATGGAAGCTGTGTTTAAGGACCTCAATTCTACTCTTTATGGAAATCCTC : ATAGCCAGAGCACTTGTAGTTTGGCTACCGAGGACATTGTTGGGAAAGCACGCCAACAG : GTCCTTAGTTTCTTCAATGCATCACCAAGAGAATATAGCTGTATATTCACTTCTGGGGCAACAGCTGCACTAAAGCTTGTCGGTGAGACATTCCCATGGAGCAGTAACAGCAGTTTTATGTACTCAATGGAGAATCATAACAGCGTCCTTGGGATTAGGGA : ATATGCTCTCAGTAAAGGAGCTGCTGCTTTTGCAGTTGACATTGAAGATACACATGTTGGTGAATCAGAAAGCCCACAGTCTAACTTAAAACTAACACAGCACCACATTCAGAGAAGAAATGAAGGTGGCGTTCTGAAAGAAGGGATGACAG : GTAACACATACAACTTGTTTGCATTCCCATCAGAATGCAATTTTTCAGGTCGAAAATTCGACCCTAACCTGATTAAGATTATCAAAGAAGGGTCTGAAAGAATCTTAGAAAGCTCCCAGTATTCCAG : AGGTTGCTGGTTAGTTCTGATAGATGCTGCTAAAGGATGTGCTACCAATCCACCAAATTTATCAATGTTTAAAGCAGACTTTGTTGTGTTCTCATTCTACAAG : TTATTTGGCTATCCAACTGGCCTTGGAGCACTCATTGTTCGAAAGG : ATGCTGCTAAGCTGATGAAGAAGACCTACTTTAGTGGAG : GCACGGTGACTGCAGCTATTGCTGACGTTGACTTTTTCAAAAGAAGAGAAGGTGTAGAGGAATTTTTTGAGGATGGAACCATTTCATTCTTGAGCATAACAGCAATTCAACATGGGTTCAAAATAATTAATATGCTAACGACATCTTCGATTTTCCG : GCATACAACATCAATTGCAGCATATGTGAGGAATAAGCTTTTGGCACTGAAGCATGAAAATGGAGAATTTGTTTGCACGCTGTACGGG : TTATTATCTAGTGAGATGGGCCCCACAGTTTCATTCAACATGAAAAGACCAGATGGAACATGGTATGGATACCGTGAGGTGGAAAAATTGGCAACCTTGGCAGGAATTCAACTGCGG : ACAGGATGTTTTTGCAATCCTGGTGCTTGTGCTAAATATCTTGGTTTGTCACACTTGGATCTTCTTTCAAATATTGAG : GCTGGGCATGTGTGCTGGGATGATCGTGACATTTTACATGGAAAACCAACTGGAGCAGTCAGAGTATCTTTTGGTTACATGTCAACATTCGAAGATGCCATG : AAATTCGTCAACTTCGTGGAAAGTAATTTTGTGATATCATCTTTTAATCGGTGTGCATTGCAGCCAAGGTCCATCTCTCTGCCAATTGAAG : GGATTGCAGAAGCTGCTGCACGGCATTTCCTCACATCTATTACTGTCTATCCAATAAAGTCTTGTGCGGGATTTAGTGTGGATCAGTGGCCTCTAACATCTACTG : GGTTATTGCATGATCGTGAATGGATTCTCAAGAGCACAACCGGTGAAATTCTTACCCAAAAGAAG : GTTCCAGAAATGTGCTATATCTCCACGCTGATTGATCTCAATTTGGGGAAACTGTTTGTAGAGTCACCTCGTTGCAAGGAGAAATTGCAGATTGAACTCAAATCCAGCTCACTGGTCACTGAAAGAGATGAAATGGATATCCAAAATCATAG : ATATGAAGTCACAAGTTACAACAATGAGGTTGATATCTGGTTCAGCAGGGCGATTGATCGACCTTGCACTCTACTAAGAAATTCCGATTCCCAGAGTCACTCCTGCATAAATAAGAACGGGAGTCCTGGCATGTGCAGGGATGTTGGTGCTAGATTGAATTTTGTTAATGAAGCCCAATTTCTGCTGATATCTGAAGAAAGCATAAAGGACCTCAACTCTAGGCTGAAATCTA : ATGGACGAAGGAGAAATGGTGGACAAGCAGTACAAGTTGGTGTAATGAGATTTCGACCCAATCTTGTAGCATCTAGTGGTGAACCATATGCAGAAGATGGATGGAGCAATATAAATATTGGAGGCAAATATTTTATG : TCATTGGGTGGTTGCAATCGTTGCCAGATGATCAATATAAATCCAGAGGCTGGGGAGGTGCAGAGGTTTACTGAACCTTTGGCAACTTTAGCAGGTTACAGGAGAGCAAAG : GGGAAAATAATGTTTGGCATACTGCTAAGATATGAGAATAATACGAAAACCGAGTCAGATACATGGATTCGTGTGGGAGAAGAAATAATTCCAAATGGAGATAGGCATTGATTGTTTTTCGTGGAAGTTCCTATTTGAGACTTGTAAGTAGTCACAACAGAGGTGATACAAGTGTTCAATATTGTGAAGCAGCGCAAAAAACACTTGCTCTAGCCAGGTCAATACATCAAACTGTACTTTGTTGCTGTTCTCTATCTGCAAAAGAGTATGTTCTTCTAAAAGAACTCGCTAAGATCTTCATTCTTTGTAACCAGTACTATTATAAGCTAATAAATACCCAATCGTAATATTAACTTCTTTGGGGCTGCGTATAGTTTTATGTGTAAGTTTTTAGTTTGTGTAGTGACTCGGTGTGCAAGTACAACCCATGGATGATGCAAAAATCCTCAGGACATCGCCATGATCTTATTAACAGTGCTTTCTCGAGAGTTGAGACCAAACGGGTGGAAAAGATAGTGAACGTTGAAAGCTTTATTCCTCTCAACTATGAAGGTTAATTATGAATGTACATGTTAATACTTAGCAATATTGGTGGAATAATATGTTTGTCATTTTGTTTTCACTCTTCGCAAAGGAACAAAGAATCCATTGCTCAAATTTCAGAAGTAAAAGGATATACTACTATCAATTATGTCTTGACT</gDNA_template>
            <first_frame> H  S  F  E  F  V  P  G  L  S  K  K  F  Q  S  Q  P  L  Q  N  E  H  R  I  G  E  R  A  I  S  E  G  I  W  K  L  L  W  L  C  Q  F  P  Q  K  H  *  *  N  *  S  Y  *  I  *  A  L  K  R :   Y  G  I  L  G  S  C  W  G  D  S  L  F  R  V  S  N  G  S  C  V  *  G  P  Q  F  Y  S  L  W  K  S  S :   *  P  E  H  L  *  F  G  Y  R  G  H  C  W  E  S  T  P  T   : G  P  *  F  L  Q  C  I  T  K  R  I  *  L  Y  I  H  F  W  G  N  S  C  T  K  A  C  R  *  D  I  P  M  E  Q  *  Q  Q  F  Y  V  L  N  G  E  S  *  Q  R  P  W  D  *  G  :  I  C  S  Q  *  R  S  C  C  F  C  S  *  H  *  R  Y  T  C  W  *  I  R  K  P  T  V  *  L  K  T  N  T  A  P  H  S  E  K  K  *  R  W  R  S  E  R  R  D  D  R :   *  H  I  Q  L  V  C  I  P  I  R  M  Q  F  F  R  S  K  I  R  P  *  P  D  *  D  Y  Q  R  R  V  *  K  N  L  R  K  L  P  V  F  Q  :  R  L  L  V  S  S  D  R  C  C  *  R  M  C  Y  Q  S  T  K  F  I  N  V  *  S  R  L  C  C  V  L  I  L  Q   : V  I  W  L  S  N  W  P  W  S  T  H  C  S  K  G :   C  C  *  A  D  E  E  D  L  L  *  W  R :   H  G  D  C  S  Y  C  *  R  *  L  F  Q  K  K  R  R  C  R  G  I  F  *  G  W  N  H  F  I  L  E  H  N  S  N  S  T  W  V  Q  N  N  *  Y  A  N  D  I  F  D  F  P  :  A  Y  N  I  N  C  S  I  C  E  E  *  A  F  G  T  E  A  *  K  W  R  I  C  L  H  A  V  R   : V  I  I  *  *  D  G  P  H  S  F  I  Q  H  E  K  T  R  W  N  M  V  W  I  P  *  G  G  K  I  G  N  L  G  R  N  S  T  A   : D  R  M  F  L  Q  S  W  C  L  C  *  I  S  W  F  V  T  L  G  S  S  F  K  Y  *   : G  W  A  C  V  L  G  *  S  *  H  F  T  W  K  T  N  W  S  S  Q  S  I  F  W  L  H  V  N  I  R  R  C  H   : E  I  R  Q  L  R  G  K  *  F  C  D  I  I  F  *  S  V  C  I  A  A  K  V  H  L  S  A  N  *  R :   D  C  R  S  C  C  T  A  F  P  H  I  Y  Y  C  L  S  N  K  V  L  C  G  I  *  C  G  S  V  A  S  N  I  Y  W :   V  I  A  *  S  *  M  D  S  Q  E  H  N  R  *  N  S  Y  P  K  E   : G  S  R  N  V  L  Y  L  H  A  D  *  S  Q  F  G  E  T  V  C  R  V  T  S  L  Q  G  E  I  A  D  *  T  Q  I  Q  L  T  G  H  *  K  R  *  N  G  Y  P  K  S  *  :  I  *  S  H  K  L  Q  Q  *  G  *  Y  L  V  Q  Q  G  D  *  S  T  L  H  S  T  K  K  F  R  F  P  E  S  L  L  H  K  *  E  R  E  S  W  H  V  Q  G  C  W  C  *  I  E  F  C  *  *  S  P  I  S  A  D  I  *  R  K  H  K  G  P  Q  L  *  A  E  I  * :   W  T  K  E  K  W  W  T  S  S  T  S  W  C  N  E  I  S  T  Q  S  C  S  I  *  W  *  T  I  C  R  R  W  M  E  Q  Y  K  Y  W  R  Q  I  F  Y   : V  I  G  W  L  Q  S  L  P  D  D  Q  Y  K  S  R  G  W  G  G  A  E  V  Y  *  T  F  G  N  F  S  R  L  Q  E  S  K   : G  E  N  N  V  W  H  T  A  K  I  *  E  *  Y  E  N  R  V  R  Y  M  D  S  C  G  R  R  N  N  S  K  W  R  *  A  L  I  V  F  R  G  S  S  Y  L  R  L  V  S  S  H  N  R  G  D  T  S  V  Q  Y  C  E  A  A  Q  K  T  L  A  L  A  R  S  I  H  Q  T  V  L  C  C  C  S  L  S  A  K  E  Y  V  L  L  K  E  L  A  K  I  F  I  L  C  N  Q  Y  Y  Y  K  L  I  N  T  Q  S  *  Y  *  L  L  W  G  C  V  *  F  Y  V  *  V  F  S  L  C  S  D  S  V  C  K  Y  N  P  W  M  M  Q  K  S  S  G  H  R  H  D  L  I  N  S  A  F  S  R  V  E  T  K  R  V  E  K  I  V  N  V  E  S  F  I  P  L  N  Y  E  G  *  L  *  M  Y  M  L  I  L  S  N  I  G  G  I  I  C  L  S  F  C  F  H  S  S  Q  R  N  K  E  S  I  A  Q  I  S  E  V  K  G  Y  T  T  I  N  Y  V  L  T </first_frame>
            <second_frame>  I  H  L  S  L  F  R  A  *  V  R  N  S  N  R  N  R  C  K  M  N  I  E  S  E  K  E  Q  F  L  K  E  F  G  S  Y  Y  G  Y  A  N  S  P  K  N  I  D  E  I  R  A  T  E  F  K  R  L  N   : D  T  V  Y  L  D  H  A  G  A  T  L  Y  S  E  S  Q  M  E  A  V  F  K  D  L  N  S  T  L  Y  G  N  P   : H  S  Q  S  T  C  S  L  A  T  E  D  I  V  G  K  A  R  Q  Q  :  V  L  S  F  F  N  A  S  P  R  E  Y  S  C  I  F  T  S  G  A  T  A  A  L  K  L  V  G  E  T  F  P  W  S  S  N  S  S  F  M  Y  S  M  E  N  H  N  S  V  L  G  I  R  E :   Y  A  L  S  K  G  A  A  A  F  A  V  D  I  E  D  T  H  V  G  E  S  E  S  P  Q  S  N  L  K  L  T  Q  H  H  I  Q  R  R  N  E  G  G  V  L  K  E  G  M  T   : G  N  T  Y  N  L  F  A  F  P  S  E  C  N  F  S  G  R  K  F  D  P  N  L  I  K  I  I  K  E  G  S  E  R  I  L  E  S  S  Q  Y  S  R :   G  C  W  L  V  L  I  D  A  A  K  G  C  A  T  N  P  P  N  L  S  M  F  K  A  D  F  V  V  F  S  F  Y  K  :  L  F  G  Y  P  T  G  L  G  A  L  I  V  R  K   : D  A  A  K  L  M  K  K  T  Y  F  S  G   : G  T  V  T  A  A  I  A  D  V  D  F  F  K  R  R  E  G  V  E  E  F  F  E  D  G  T  I  S  F  L  S  I  T  A  I  Q  H  G  F  K  I  I  N  M  L  T  T  S  S  I  F  R :   H  T  T  S  I  A  A  Y  V  R  N  K  L  L  A  L  K  H  E  N  G  E  F  V  C  T  L  Y  G  :  L  L  S  S  E  M  G  P  T  V  S  F  N  M  K  R  P  D  G  T  W  Y  G  Y  R  E  V  E  K  L  A  T  L  A  G  I  Q  L  R  :  T  G  C  F  C  N  P  G  A  C  A  K  Y  L  G  L  S  H  L  D  L  L  S  N  I  E  :  A  G  H  V  C  W  D  D  R  D  I  L  H  G  K  P  T  G  A  V  R  V  S  F  G  Y  M  S  T  F  E  D  A  M  :  K  F  V  N  F  V  E  S  N  F  V  I  S  S  F  N  R  C  A  L  Q  P  R  S  I  S  L  P  I  E   : G  I  A  E  A  A  A  R  H  F  L  T  S  I  T  V  Y  P  I  K  S  C  A  G  F  S  V  D  Q  W  P  L  T  S  T   : G  L  L  H  D  R  E  W  I  L  K  S  T  T  G  E  I  L  T  Q  K  K  :  V  P  E  M  C  Y  I  S  T  L  I  D  L  N  L  G  K  L  F  V  E  S  P  R  C  K  E  K  L  Q  I  E  L  K  S  S  S  L  V  T  E  R  D  E  M  D  I  Q  N  H  R :   Y  E  V  T  S  Y  N  N  E  V  D  I  W  F  S  R  A  I  D  R  P  C  T  L  L  R  N  S  D  S  Q  S  H  S  C  I  N  K  N  G  S  P  G  M  C  R  D  V  G  A  R  L  N  F  V  N  E  A  Q  F  L  L  I  S  E  E  S  I  K  D  L  N  S  R  L  K  S   : N  G  R  R  R  N  G  G  Q  A  V  Q  V  G  V  M  R  F  R  P  N  L  V  A  S  S  G  E  P  Y  A  E  D  G  W  S  N  I  N  I  G  G  K  Y  F  M  :  S  L  G  G  C  N  R  C  Q  M  I  N  I  N  P  E  A  G  E  V  Q  R  F  T  E  P  L  A  T  L  A  G  Y  R  R  A  K  :  G  K  I  M  F  G  I  L  L  R  Y  E  N  N  T  K  T  E  S  D  T  W  I  R  V  G  E  E  I  I  P  N  G  D  R  H  *  L  F  F  V  E  V  P  I  *  D  L  *  V  V  T  T  E  V  I  Q  V  F  N  I  V  K  Q  R  K  K  H  L  L  *  P  G  Q  Y  I  K  L  Y  F  V  A  V  L  Y  L  Q  K  S  M  F  F  *  K  N  S  L  R  S  S  F  F  V  T  S  T  I  I  S  *  *  I  P  N  R  N  I  N  F  F  G  A  A  Y  S  F  M  C  K  F  L  V  C  V  V  T  R  C  A  S  T  T  H  G  *  C  K  N  P  Q  D  I  A  M  I  L  L  T  V  L  S  R  E  L  R  P  N  G  W  K  R  *  *  T  L  K  A  L  F  L  S  T  M  K  V  N  Y  E  C  T  C  *  Y  L  A  I  L  V  E  *  Y  V  C  H  F  V  F  T  L  R  K  G  T  K  N  P  L  L  K  F  Q  K  *  K  D  I  L  L  S  I  M  S  *   </second_frame>
            <third_frame>   F  I  *  V  C  S  G  L  E  *  E  I  P  I  A  T  A  A  K  *  T  S  N  R  R  K  S  N  F  *  R  N  L  E  A  I  M  V  M  P  I  P  P  K  T  L  M  K  L  E  L  L  N  L  S  A  *  T  :  I  R  Y  T  W  I  M  L  G  R  L  S  I  P  S  L  K  W  K  L  C  L  R  T  S  I  L  L  F  M  E  I  L  :  I  A  R  A  L  V  V  W  L  P  R  T  L  L  G  K  H  A  N  R :   S  L  V  S  S  M  H  H  Q  E  N  I  A  V  Y  S  L  L  G  Q  Q  L  H  *  S  L  S  V  R  H  S  H  G  A  V  T  A  V  L  C  T  Q  W  R  I  I  T  A  S  L  G  L  G   : N  M  L  S  V  K  E  L  L  L  L  Q  L  T  L  K  I  H  M  L  V  N  Q  K  A  H  S  L  T  *  N  *  H  S  T  T  F  R  E  E  M  K  V  A  F  *  K  K  G  *  Q  :  V  T  H  T  T  C  L  H  S  H  Q  N  A  I  F  Q  V  E  N  S  T  L  T  *  L  R  L  S  K  K  G  L  K  E  S  *  K  A  P  S  I  P   : E  V  A  G  *  F  *  *  M  L  L  K  D  V  L  P  I  H  Q  I  Y  Q  C  L  K  Q  T  L  L  C  S  H  S  T  S :   Y  L  A  I  Q  L  A  L  E  H  S  L  F  E  R  :  M  L  L  S  *  *  R  R  P  T  L  V  E  :  A  R  *  L  Q  L  L  L  T  L  T  F  S  K  E  E  K  V  *  R  N  F  L  R  M  E  P  F  H  S  *  A  *  Q  Q  F  N  M  G  S  K  *  L  I  C  *  R  H  L  R  F  S   : G  I  Q  H  Q  L  Q  H  M  *  G  I  S  F  W  H  *  S  M  K  M  E  N  L  F  A  R  C  T  G :   Y  Y  L  V  R  W  A  P  Q  F  H  S  T  *  K  D  Q  M  E  H  G  M  D  T  V  R  W  K  N  W  Q  P  W  Q  E  F  N  C  G :   Q  D  V  F  A  I  L  V  L  V  L  N  I  L  V  C  H  T  W  I  F  F  Q  I  L  R :   L  G  M  C  A  G  M  I  V  T  F  Y  M  E  N  Q  L  E  Q  S  E  Y  L  L  V  T  C  Q  H  S  K  M  P  * :   N  S  S  T  S  W  K  V  I  L  *  Y  H  L  L  I  G  V  H  C  S  Q  G  P  S  L  C  Q  L  K  :  G  L  Q  K  L  L  H  G  I  S  S  H  L  L  L  S  I  Q  *  S  L  V  R  D  L  V  W  I  S  G  L  *  H  L  L  :  G  Y  C  M  I  V  N  G  F  S  R  A  Q  P  V  K  F  L  P  K  R  R :   F  Q  K  C  A  I  S  P  R  *  L  I  S  I  W  G  N  C  L  *  S  H  L  V  A  R  R  N  C  R  L  N  S  N  P  A  H  W  S  L  K  E  M  K  W  I  S  K  I  I   : D  M  K  S  Q  V  T  T  M  R  L  I  S  G  S  A  G  R  L  I  D  L  A  L  Y  *  E  I  P  I  P  R  V  T  P  A  *  I  R  T  G  V  L  A  C  A  G  M  L  V  L  D  *  I  L  L  M  K  P  N  F  C  *  Y  L  K  K  A  *  R  T  S  T  L  G  *  N  L  :  M  D  E  G  E  M  V  D  K  Q  Y  K  L  V  *  *  D  F  D  P  I  L  *  H  L  V  V  N  H  M  Q  K  M  D  G  A  I  *  I  L  E  A  N  I  L  C :   H  W  V  V  A  I  V  A  R  *  S  I  *  I  Q  R  L  G  R  C  R  G  L  L  N  L  W  Q  L  *  Q  V  T  G  E  Q  R :   G  K  *  C  L  A  Y  C  *  D  M  R  I  I  R  K  P  S  Q  I  H  G  F  V  W  E  K  K  *  F  Q  M  E  I  G  I  D  C  F  S  W  K  F  L  F  E  T  C  K  *  S  Q  Q  R  *  Y  K  C  S  I  L  *  S  S  A  K  N  T  C  S  S  Q  V  N  T  S  N  C  T  L  L  L  F  S  I  C  K  R  V  C  S  S  K  R  T  R  *  D  L  H  S  L  *  P  V  L  L  *  A  N  K  Y  P  I  V  I  L  T  S  L  G  L  R  I  V  L  C  V  S  F  *  F  V  *  *  L  G  V  Q  V  Q  P  M  D  D  A  K  I  L  R  T  S  P  *  S  Y  *  Q  C  F  L  E  S  *  D  Q  T  G  G  K  D  S  E  R  *  K  L  Y  S  S  Q  L  *  R  L  I  M  N  V  H  V  N  T  *  Q  Y  W  W  N  N  M  F  V  I  L  F  S  L  F  A  K  E  Q  R  I  H  C  S  N  F  R  S  K  R  I  Y  Y  Y  Q  L  C  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38628" stop="38775"/>
                    <exon start="38853" stop="38951"/>
                    <exon start="39063" stop="39121"/>
                    <exon start="39350" stop="39510"/>
                    <exon start="40394" stop="40545"/>
                    <exon start="40835" stop="40961"/>
                    <exon start="41491" stop="41593"/>
                    <exon start="41717" stop="41762"/>
                    <exon start="42039" stop="42077"/>
                    <exon start="42157" stop="42313"/>
                    <exon start="43016" stop="43103"/>
                    <exon start="43442" stop="43558"/>
                    <exon start="44438" stop="44515"/>
                    <exon start="44605" stop="44706"/>
                    <exon start="45456" stop="45546"/>
                    <exon start="45717" stop="45821"/>
                    <exon start="46021" stop="46085"/>
                    <exon start="46993" stop="47144"/>
                    <exon start="48781" stop="49013"/>
                    <exon start="49541" stop="49677"/>
                    <exon start="49837" stop="49947"/>
                    <exon start="50041" stop="50151"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2478</number_coding_nucleotides>
                  <number_encoded_amino_acids>826</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRNSNRNRCKMNIESEKEQFLKEFGSYYGYANSPKNIDEIRATEFKRLNDTVYLDHAGATLYSESQMEAVFKDLNSTLYGNPHSQSTCSLATEDIVGKARQQVLSFFNASPREYSCIFTSGATAALKLVGETFPWSSNSSFMYSMENHNSVLGIREYALSKGAAAFAVDIEDTHVGESESPQSNLKLTQHHIQRRNEGGVLKEGMTGNTYNLFAFPSECNFSGRKFDPNLIKIIKEGSERILESSQYSRGCWLVLIDAAKGCATNPPNLSMFKADFVVFSFYKLFGYPTGLGALIVRKDAAKLMKKTYFSGGTVTAAIADVDFFKRREGVEEFFEDGTISFLSITAIQHGFKIINMLTTSSIFRHTTSIAAYVRNKLLALKHENGEFVCTLYGLLSSEMGPTVSFNMKRPDGTWYGYREVEKLATLAGIQLRTGCFCNPGACAKYLGLSHLDLLSNIEAGHVCWDDRDILHGKPTGAVRVSFGYMSTFEDAMKFVNFVESNFVISSFNRCALQPRSISLPIEGIAEAAARHFLTSITVYPIKSCAGFSVDQWPLTSTGLLHDREWILKSTTGEILTQKKVPEMCYISTLIDLNLGKLFVESPRCKEKLQIELKSSSLVTERDEMDIQNHRYEVTSYNNEVDIWFSRAIDRPCTLLRNSDSQSHSCINKNGSPGMCRDVGARLNFVNEAQFLLISEESIKDLNSRLKSNGRRRNGGQAVQVGVMRFRPNLVASSGEPYAEDGWSNINIGGKYFMSLGGCNRCQMININPEAGEVQRFTEPLATLAGYRRAKGKIMFGILLRYENNTKTESDTWIRVGEEIIPNGDRH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50145" stop="50387"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALIVFRGSSYLRLVSSHNRGDTSVQYCEAAQKTLALARSIHQTVLCCCSLSAKEYVLLKELAKIFILCNQYYYKLINTQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="53175" PGL_stop="56449"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53175" e_stop="53373"/>
            <exon e_start="54385" e_stop="54790"/>
            <exon e_start="55402" e_stop="55608"/>
            <exon e_start="55719" e_stop="55896"/>
            <exon e_start="55986" e_stop="56449"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.747" e_score="1.000"/>
          <exon-intron don_prob="0.888" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.775" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53175" e_stop="53373" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.747">
            <gDNA_intron_boundary i_start="53374" i_stop="54384" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54385" e_stop="54790" e_length="406"/>
          </exon>
          <intron i_serial="2" don_prob="0.888" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54791" i_stop="55401" i_length="611"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55402" e_stop="55608" e_length="207"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.775">
            <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="55719" e_stop="55896" e_length="178"/>
          </exon>
          <intron i_serial="4" don_prob="0.898" acc_prob="0.984">
            <gDNA_intron_boundary i_start="55897" i_stop="55985" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="55986" e_stop="56449" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53175" stop="53373"/>
              <exon start="54385" stop="54790"/>
              <exon start="55402" stop="55608"/>
              <exon start="55719" stop="55896"/>
              <exon start="55986" stop="56449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315567" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGAAATGGAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAG : CCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAAT : GTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG : GCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAG : TTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTGAATACTTTGTATGTTAGTGTAGCATTTCCACTTCAATTTGGAGTGTATCCGAGGAATGGTGAATGTTTGCAGATTTGTAGAAAAGTTGTACTGGCGGATTTGGATTGTTTTTAATCACTGTGAGTAATTTGTGCAACTGTTGTAAGCTAACGAAAGAGTATTTCATCGTTGGCTTAATTTATGCAAGGGGTTTGGTCCAA</gDNA_template>
            <first_frame> R  K  W  R  N  S  S  L  *  M  L  Q  I  *  A  P  V  P  F  Y  Q  L  G  F  L  R  L  A  V  N  L  H  F  H  F  N  A  G  G  S  T  L  P  G  L  P  L  L  *  N  S  K  L  K  L  R  S  L  S  S  E  L  E  H  E  E   : A  P  *  L  L  P  K  L  M  R  L  E  K  S  *  *  P  R  F  L  T  W  L  K  R  E  P  L  R  *  *  *  *  K  P  Q  V  I  R  Y  *  V  S  L  L  Q  I  L  V  E  K  G  C  S  Q  K  K  *  T  K  P  S  S  M  A  I  L  I  L  L  S  T  Q  *  K  M  C  P  H  I  C  Q  R  R  L  S  Y  R  A  T  F  H  V  K  M  *  G  M  H  S  F  L  *  L  Q  V  P  W  L  N  F  H  Q  E  A  Q  L  V  L  L  H  *  G  E  S  P  R  F  S  T  A  I  P  H  S  M :   C  W  R  I  S  E  A  M  S  R  Q  G  *  R  N  *  M  R  E  *  F  K  L  H  Y  W  H  W  Q  G  L  S  V  *  I  *  Q  K  M  Y  H  R  S  F  L  *  R  I  C  Y  Q  L  L  L  R  V  P  L  V  L  P  A  E  V  M  T  R  Q  W :   P  T  T  L  L  L  *  I  M  K  K  P  D  *  Q  *  F  V  R  E  H  F  *  R  P  W  M  G  L  V  A  P  Q  L  L  A  M  P  V  E  V  K  M  E  I  V  F  L  K  D  *  L  P  L  Q  M  E  R  E  :  L  L  K  P  L  E  R  D  L  I  R  L  K  T  *  Y  G  W  V  K  M  L  A  R  N  Y  F  R  K  Q  V  Q  D  F  L  A  T  E  *  S  L  C  S  Y  G  R  P  L  P  M  K  N  A  E  M  Y  R  I  T  G  I  E  I  G  I  L  Y  F  T  P  T  I  G  L  *  V  Y  L  S  L  *  L  Y  R  Q  *  N  L  N  T  L  Y  V  S  V  A  F  P  L  Q  F  G  V  Y  P  R  N  G  E  C  L  Q  I  C  R  K  V  V  L  A  D  L  D  C  F  *  S  L  *  V  I  C  A  T  V  V  S  *  R  K  S  I  S  S  L  A  *  F  M  Q  G  V  W  S   </first_frame>
            <second_frame>  G  N  G  E  I  R  R  S  K  C  F  K  F  E  L  R  F  P  F  T  N  W  V  F  F  A  L  P  *  I  C  T  F  T  S  T  P  A  G  P  R  Y  Q  G  F  R  C  S  R  T  A  S  S  N  *  G  R  C  H  Q  S  W  N  T  R  K  :  P  P  S  S  C  P  S  L  *  D  S  R  K  A  N  S  L  V  S  *  P  G  *  R  G  S  H  *  D  S  N  N  K  N  H  R  *  *  D  I  K  S  A  S  C  R  Y  W  W  K  R  V  V  H  K  R  N  R  R  S  P  H  Q  W  R  Y  *  Y  C  C  P  L  N  E  R  C  A  H  I  S  A  R  E  D  Y  L  T  V  Q  P  S  T  *  R  C  E  G  C  I  H  F  F  N  C  R  F  P  G  *  T  S  I  R  K  H  N  W  Y  C  F  T  E  E  K  V  P  D  S  P  P  L  S  L  T  Q   : C  V  G  E  F  Q  R  Q  C  P  D  K  V  E  E  T  E  *  G  S  S  S  S  Y  I  I  G  T  G  R  A  *  A  S  E  Y  D  R  K  C  I  I  D  P  F  Y  R  G  Y  A  T  S  C  C  S  G  C  H  W  Y  C  L  Q  K  *  *  R  D  N   : G  Q  L  H  C  C  F  K  S  *  R  N  Q  I  S  N  S  L  *  E  S  I  F  D  D  L  G  W  V  L  S  H  P  N  C  W  L  C  L  S  R  *  R  W  R  L  Y  F  *  R  I  S  C  L  S  R  W  N  A  S :   Y  *  N  L  *  K  G  T  L  Y  V  *  R  H  D  T  D  G  *  R  C  W  P  G  T  T  F  E  S  R  S  R  I  F  W  Q  L  S  K  A  Y  A  L  M  V  D  L  C  L  *  K  M  Q  R  C  I  E  *  Q  G  *  R  S  E  F  Y  I  S  P  L  L  *  D  Y  E  S  T  Y  P  C  N  C  I  G  N  R  I  *  I  L  C  M  L  V  *  H  F  H  F  N  L  E  C  I  R  G  M  V  N  V  C  R  F  V  E  K  L  Y  W  R  I  W  I  V  F  N  H  C  E  *  F  V  Q  L  L  *  A  N  E  R  V  F  H  R  W  L  N  L  C  K  G  F  G  P  </second_frame>
            <third_frame>   E  M  E  K  F  V  A  L  N  A  S  N  L  S  S  G  S  L  L  P  I  G  F  S  S  P  C  R  K  S  A  L  S  L  Q  R  R  R  V  H  V  T  R  A  S  V  A  L  E  Q  Q  A  Q  T  K  V  A  V  I  R  V  G  T  R  G  S :   P  L  A  L  A  Q  A  Y  E  T  R  E  K  L  I  A  S  F  P  D  L  A  E  E  G  A  I  E  I  V  I  I  K  T  T  G  D  K  I  L  S  Q  P  L  A  D  I  G  G  K  G  L  F  T  K  E  I  D  E  A  L  I  N  G  D  I  D  I  A  V  H  S  M  K  D  V  P  T  Y  L  P  E  K  T  I  L  P  C  N  L  P  R  E  D  V  R  D  A  F  I  S  L  T  A  G  S  L  A  E  L  P  S  G  S  T  I  G  T  A  S  L  R  R  K  S  Q  I  L  H  R  Y  P  S  L  N  :  V  L  E  N  F  R  G  N  V  Q  T  R  L  K  K  L  N  E  G  V  V  Q  A  T  L  L  A  L  A  G  L  K  R  L  N  M  T  E  N  V  S  S  I  L  S  I  E  D  M  L  P  A  V  A  Q  G  A  I  G  I  A  C  R  S  D  D  E  T  M  :  A  N  Y  I  A  A  L  N  H  E  E  T  R  L  A  I  V  C  E  R  A  F  L  T  T  L  D  G  S  C  R  T  P  I  A  G  Y  A  C  R  G  E  D  G  D  C  I  F  K  G  L  V  A  S  P  D  G  T  R   : V  I  E  T  S  R  K  G  P  Y  T  S  E  D  M  I  R  M  G  E  D  A  G  Q  E  L  L  S  K  A  G  P  G  F  F  G  N  *  V  K  L  M  L  L  W  S  T  S  A  Y  E  K  C  R  D  V  S  N  N  R  D  R  D  R  N  F  I  F  H  P  Y  Y  R  I  M  S  L  L  I  L  V  T  V  S  A  I  E  F  E  Y  F  V  C  *  C  S  I  S  T  S  I  W  S  V  S  E  E  W  *  M  F  A  D  L  *  K  S  C  T  G  G  F  G  L  F  L  I  T  V  S  N  L  C  N  C  C  K  L  T  K  E  Y  F  I  V  G  L  I  Y  A  R  G  L  V  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53177" stop="53373"/>
                    <exon start="54385" stop="54790"/>
                    <exon start="55402" stop="55608"/>
                    <exon start="55719" stop="55896"/>
                    <exon start="55986" stop="56098"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMEKFVALNASNLSSGSLLPIGFSSPCRKSALSLQRRRVHVTRASVALEQQAQTKVAVIRVGTRGSPLALAQAYETREKLIASFPDLAEEGAIEIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLTAGSLAELPSGSTIGTASLRRKSQILHRYPSLNVLENFRGNVQTRLKKLNEGVVQATLLALAGLKRLNMTENVSSILSIEDMLPAVAQGAIGIACRSDDETMANYIAALNHEETRLAIVCERAFLTTLDGSCRTPIAGYACRGEDGDCIFKGLVASPDGTRVIETSRKGPYTSEDMIRMGEDAGQELLSKAGPGFFGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="54581" e_stop="54790"/>
            <exon e_start="55402" e_stop="55608"/>
            <exon e_start="55719" e_stop="55744"/>
            <exon e_start="55986" e_stop="56290"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.888" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.775" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54581" e_stop="54790" e_length="210"/>
          </exon>
          <intron i_serial="1" don_prob="0.888" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54791" i_stop="55401" i_length="611"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55402" e_stop="55608" e_length="207"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.775">
            <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55719" e_stop="55744" e_length="26"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="55745" i_stop="55985" i_length="241"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="55986" e_stop="56290" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54581" stop="54790"/>
              <exon start="55402" stop="55608"/>
              <exon start="55719" stop="55744"/>
              <exon start="55986" stop="56290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315566" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAGATGTGAGGGATGCATTCATTTCTTTAACTGCAGGTTCCCTGGCTGAACTTCCATCAGGAAGCACAATTGGTACTGCTTCACTGAGGAGAAAGTCCCAGATTCTCCACCGCTATCCCTCACTCAAT : GTGTTGGAGAATTTCAGAGGCAATGTCCAGACAAGGTTGAAGAAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG : GCCAACTACATTGCTGCTTTAAATCA : TTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGCCAGGAACTACTTTCGAAAGCAGGTCCAGGATTTTTTGGCAACTGAGTAAAGCTTATGCTCTTATGGTCGACCTCTGCCTATGAAAAATGCAGAGATGTATCGAATAACAGGGATAGAGATCGGAATTTTATATTTCACCCCTACTATAGGATTATGAGTCTACTTATCCTTGTAACTGTATCGGCAATAGAATTTGAATACTTTGTATGTTAGTGTAGCATTTCCACTTCAATTTGG</gDNA_template>
            <first_frame> I  D  I  A  V  H  S  M  K  D  V  P  T  Y  L  P  E  K  T  I  L  P  C  N  L  P  R  E  D  V  R  D  A  F  I  S  L  T  A  G  S  L  A  E  L  P  S  G  S  T  I  G  T  A  S  L  R  R  K  S  Q  I  L  H  R  Y  P  S  L  N  :  V  L  E  N  F  R  G  N  V  Q  T  R  L  K  K  L  N  E  G  V  V  Q  A  T  L  L  A  L  A  G  L  K  R  L  N  M  T  E  N  V  S  S  I  L  S  I  E  D  M  L  P  A  V  A  Q  G  A  I  G  I  A  C  R  S  D  D  E  T  M  :  A  N  Y  I  A  A  L  N  H :   Y  *  N  L  *  K  G  T  L  Y  V  *  R  H  D  T  D  G  *  R  C  W  P  G  T  T  F  E  S  R  S  R  I  F  W  Q  L  S  K  A  Y  A  L  M  V  D  L  C  L  *  K  M  Q  R  C  I  E  *  Q  G  *  R  S  E  F  Y  I  S  P  L  L  *  D  Y  E  S  T  Y  P  C  N  C  I  G  N  R  I  *  I  L  C  M  L  V  *  H  F  H  F  N  L  </first_frame>
            <second_frame>  L  I  L  L  S  T  Q  *  K  M  C  P  H  I  C  Q  R  R  L  S  Y  R  A  T  F  H  V  K  M  *  G  M  H  S  F  L  *  L  Q  V  P  W  L  N  F  H  Q  E  A  Q  L  V  L  L  H  *  G  E  S  P  R  F  S  T  A  I  P  H  S  M :   C  W  R  I  S  E  A  M  S  R  Q  G  *  R  N  *  M  R  E  *  F  K  L  H  Y  W  H  W  Q  G  L  S  V  *  I  *  Q  K  M  Y  H  R  S  F  L  *  R  I  C  Y  Q  L  L  L  R  V  P  L  V  L  P  A  E  V  M  T  R  Q  W :   P  T  T  L  L  L  *  I   : I  I  E  T  S  R  K  G  P  Y  T  S  E  D  M  I  R  M  G  E  D  A  G  Q  E  L  L  S  K  A  G  P  G  F  F  G  N  *  V  K  L  M  L  L  W  S  T  S  A  Y  E  K  C  R  D  V  S  N  N  R  D  R  D  R  N  F  I  F  H  P  Y  Y  R  I  M  S  L  L  I  L  V  T  V  S  A  I  E  F  E  Y  F  V  C  *  C  S  I  S  T  S  I  W </second_frame>
            <third_frame>   *  Y  C  C  P  L  N  E  R  C  A  H  I  S  A  R  E  D  Y  L  T  V  Q  P  S  T  *  R  C  E  G  C  I  H  F  F  N  C  R  F  P  G  *  T  S  I  R  K  H  N  W  Y  C  F  T  E  E  K  V  P  D  S  P  P  L  S  L  T  Q   : C  V  G  E  F  Q  R  Q  C  P  D  K  V  E  E  T  E  *  G  S  S  S  S  Y  I  I  G  T  G  R  A  *  A  S  E  Y  D  R  K  C  I  I  D  P  F  Y  R  G  Y  A  T  S  C  C  S  G  C  H  W  Y  C  L  Q  K  *  *  R  D  N   : G  Q  L  H  C  C  F  K  S  :  L  L  K  P  L  E  R  D  L  I  R  L  K  T  *  Y  G  W  V  K  M  L  A  R  N  Y  F  R  K  Q  V  Q  D  F  L  A  T  E  *  S  L  C  S  Y  G  R  P  L  P  M  K  N  A  E  M  Y  R  I  T  G  I  E  I  G  I  L  Y  F  T  P  T  I  G  L  *  V  Y  L  S  L  *  L  Y  R  Q  *  N  L  N  T  L  Y  V  S  V  A  F  P  L  Q  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54581" stop="54790"/>
                    <exon start="55402" stop="55608"/>
                    <exon start="55719" stop="55744"/>
                    <exon start="55986" stop="55992"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLTAGSLAELPSGSTIGTASLRRKSQILHRYPSLNVLENFRGNVQTRLKKLNEGVVQATLLALAGLKRLNMTENVSSILSIEDMLPAVAQGAIGIACRSDDETMANYIAALNHY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="53183" e_stop="53373"/>
            <exon e_start="54385" e_stop="54665"/>
            <exon e_start="55444" e_stop="55608"/>
            <exon e_start="55719" e_stop="55896"/>
            <exon e_start="55986" e_stop="56053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.747" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.775" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53183" e_stop="53373" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.747">
            <gDNA_intron_boundary i_start="53374" i_stop="54384" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54385" e_stop="54665" e_length="281"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="54666" i_stop="55443" i_length="778"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55444" e_stop="55608" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.775">
            <gDNA_intron_boundary i_start="55609" i_stop="55718" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="55719" e_stop="55896" e_length="178"/>
          </exon>
          <intron i_serial="4" don_prob="0.898" acc_prob="0.984">
            <gDNA_intron_boundary i_start="55897" i_stop="55985" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="55986" e_stop="56053" e_length="68"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53183" stop="53373"/>
              <exon start="54385" stop="54665"/>
              <exon start="55444" stop="55608"/>
              <exon start="55719" stop="55896"/>
              <exon start="55986" stop="56053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAATTCGTCGCTCTAAATGCTTCAAATTTGAGCTCCGGTTCCCTTTTACCAATTGGGTTTTCTTCGCCTTGCCGTAAATCTGCACTTTCACTTCAACGCCGGCGGGTCCACGTTACCAGGGCTTCCGTTGCTCTAGAACAGCAAGCTCAAACTAAGGTCGCTGTCATCAGAGTTGGAACACGAGGAAG : CCCCCTAGCTCTTGCCCAAGCTTATGAGACTCGAGAAAAGCTAATAGCCTCGTTTCCTGACCTGGCTGAAGAGGGAGCCATTGAGATAGTAATAATAAAAACCACAGGTGATAAGATATTAAGTCAGCCTCTTGCAGATATTGGTGGAAAAGGGTTGTTCACAAAAGAAATAGACGAAGCCCTCATCAATGGCGATATTGATATTGCTGTCCACTCAATGAAAGATGTGCCCACATATCTGCCAGAGAAGACTATCTTACCGTGCAACCTTCCACGTGAAG : AAACTGAATGAGGGAGTAGTTCAAGCTACATTATTGGCACTGGCAGGGCTTAAGCGTCTGAATATGACAGAAAATGTATCATCGATCCTTTCTATAGAGGATATGCTACCAGCTGTTGCTCAGGGTGCCATTGGTATTGCCTGCAGAAGTGATGACGAGACAATG : GCCAACTACATTGCTGCTTTAAATCATGAAGAAACCAGATTAGCAATAGTTTGTGAGAGAGCATTTTTGACGACCTTGGATGGGTCTTGTCGCACCCCAATTGCTGGCTATGCCTGTCGAGGTGAAGATGGAGATTGTATTTTTAAAGGATTAGTTGCCTCTCCAGATGGAACGCGAG : TTATTGAAACCTCTAGAAAGGGACCTTATACGTCTGAAGACATGATACGGATGGGTGAAGATGCTGGC</gDNA_template>
            <first_frame> E  K  F  V  A  L  N  A  S  N  L  S  S  G  S  L  L  P  I  G  F  S  S  P  C  R  K  S  A  L  S  L  Q  R  R  R  V  H  V  T  R  A  S  V  A  L  E  Q  Q  A  Q  T  K  V  A  V  I  R  V  G  T  R  G  S :   P  L  A  L  A  Q  A  Y  E  T  R  E  K  L  I  A  S  F  P  D  L  A  E  E  G  A  I  E  I  V  I  I  K  T  T  G  D  K  I  L  S  Q  P  L  A  D  I  G  G  K  G  L  F  T  K  E  I  D  E  A  L  I  N  G  D  I  D  I  A  V  H  S  M  K  D  V  P  T  Y  L  P  E  K  T  I  L  P  C  N  L  P  R  E   : E  T  E  *  G  S  S  S  S  Y  I  I  G  T  G  R  A  *  A  S  E  Y  D  R  K  C  I  I  D  P  F  Y  R  G  Y  A  T  S  C  C  S  G  C  H  W  Y  C  L  Q  K  *  *  R  D  N   : G  Q  L  H  C  C  F  K  S  *  R  N  Q  I  S  N  S  L  *  E  S  I  F  D  D  L  G  W  V  L  S  H  P  N  C  W  L  C  L  S  R  *  R  W  R  L  Y  F  *  R  I  S  C  L  S  R  W  N  A  S :   Y  *  N  L  *  K  G  T  L  Y  V  *  R  H  D  T  D  G  *  R  C  W  </first_frame>
            <second_frame>  R  N  S  S  L  *  M  L  Q  I  *  A  P  V  P  F  Y  Q  L  G  F  L  R  L  A  V  N  L  H  F  H  F  N  A  G  G  S  T  L  P  G  L  P  L  L  *  N  S  K  L  K  L  R  S  L  S  S  E  L  E  H  E  E   : A  P  *  L  L  P  K  L  M  R  L  E  K  S  *  *  P  R  F  L  T  W  L  K  R  E  P  L  R  *  *  *  *  K  P  Q  V  I  R  Y  *  V  S  L  L  Q  I  L  V  E  K  G  C  S  Q  K  K  *  T  K  P  S  S  M  A  I  L  I  L  L  S  T  Q  *  K  M  C  P  H  I  C  Q  R  R  L  S  Y  R  A  T  F  H  V  K  :  K  L  N  E  G  V  V  Q  A  T  L  L  A  L  A  G  L  K  R  L  N  M  T  E  N  V  S  S  I  L  S  I  E  D  M  L  P  A  V  A  Q  G  A  I  G  I  A  C  R  S  D  D  E  T  M  :  A  N  Y  I  A  A  L  N  H  E  E  T  R  L  A  I  V  C  E  R  A  F  L  T  T  L  D  G  S  C  R  T  P  I  A  G  Y  A  C  R  G  E  D  G  D  C  I  F  K  G  L  V  A  S  P  D  G  T  R   : V  I  E  T  S  R  K  G  P  Y  T  S  E  D  M  I  R  M  G  E  D  A  G </second_frame>
            <third_frame>   E  I  R  R  S  K  C  F  K  F  E  L  R  F  P  F  T  N  W  V  F  F  A  L  P  *  I  C  T  F  T  S  T  P  A  G  P  R  Y  Q  G  F  R  C  S  R  T  A  S  S  N  *  G  R  C  H  Q  S  W  N  T  R  K  :  P  P  S  S  C  P  S  L  *  D  S  R  K  A  N  S  L  V  S  *  P  G  *  R  G  S  H  *  D  S  N  N  K  N  H  R  *  *  D  I  K  S  A  S  C  R  Y  W  W  K  R  V  V  H  K  R  N  R  R  S  P  H  Q  W  R  Y  *  Y  C  C  P  L  N  E  R  C  A  H  I  S  A  R  E  D  Y  L  T  V  Q  P  S  T  *  R :   N  *  M  R  E  *  F  K  L  H  Y  W  H  W  Q  G  L  S  V  *  I  *  Q  K  M  Y  H  R  S  F  L  *  R  I  C  Y  Q  L  L  L  R  V  P  L  V  L  P  A  E  V  M  T  R  Q  W :   P  T  T  L  L  L  *  I  M  K  K  P  D  *  Q  *  F  V  R  E  H  F  *  R  P  W  M  G  L  V  A  P  Q  L  L  A  M  P  V  E  V  K  M  E  I  V  F  L  K  D  *  L  P  L  Q  M  E  R  E  :  L  L  K  P  L  E  R  D  L  I  R  L  K  T  *  Y  G  W  V  K  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53183" stop="53373"/>
                    <exon start="54385" stop="54665"/>
                    <exon start="55444" stop="55454"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKFVALNASNLSSGSLLPIGFSSPCRKSALSLQRRRVHVTRASVALEQQAQTKVAVIRVGTRGSPLALAQAYETREKLIASFPDLAEEGAIEIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREETE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54606" stop="54665"/>
                    <exon start="55444" stop="55608"/>
                    <exon start="55719" stop="55896"/>
                    <exon start="55986" stop="56053"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMCPHICQRRLSYRATFHVKKLNEGVVQATLLALAGLKRLNMTENVSSILSIEDMLPAVAQGAIGIACRSDDETMANYIAALNHEETRLAIVCERAFLTTLDGSCRTPIAGYACRGEDGDCIFKGLVASPDGTRVIETSRKGPYTSEDMIRMGEDAG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="57016" PGL_stop="60717"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57016" e_stop="57297"/>
            <exon e_start="58240" e_stop="58366"/>
            <exon e_start="59218" e_stop="59356"/>
            <exon e_start="59493" e_stop="59581"/>
            <exon e_start="60259" e_stop="60717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.363" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.936" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57016" e_stop="57297" e_length="282"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57298" i_stop="58239" i_length="942"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58240" e_stop="58366" e_length="127"/>
          </exon>
          <intron i_serial="2" don_prob="0.363" acc_prob="0.995">
            <gDNA_intron_boundary i_start="58367" i_stop="59217" i_length="851"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59218" e_stop="59356" e_length="139"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.978">
            <gDNA_intron_boundary i_start="59357" i_stop="59492" i_length="136"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59493" e_stop="59581" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.936">
            <gDNA_intron_boundary i_start="59582" i_stop="60258" i_length="677"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="60259" e_stop="60717" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57016" stop="57297"/>
              <exon start="58240" stop="58366"/>
              <exon start="59218" stop="59356"/>
              <exon start="59493" stop="59581"/>
              <exon start="60259" stop="60717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326420" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAACTGAGTTTCCCCATACAATCCTCTCTTGTGCAGTATCTTCTAAAGTTGAAATCTCGTATAGAAAAATGAAAGTACACTCCTGCATTCATCCTCTTCCCTCTACTCCCTCCACCGGAATTTTGGTCTCTGCCGGTCCTGCGGAAGCTAAGCTTGCTGCTAACACCAGAAAGCTTTATTCTTTAACTTTGAATTCCTCTAATTATGTCCCATTTCCTTATAAAGATCAGAAATTTTCCAGAAGCAGCTCTACGGATTTTTCTAGAACGGCTATCGGTTCG : AATGTAAGTGAAGATACAGATGACATGTTTGATGATCTCCTAAGAACGCATGGCAAAGTGGTATACAAAAGAAATGACCAAAAACCTGCAAGTGAGGAGATTGATGATGATGCTGAAAGCCTATCGT : TTGCAATGGCTGTGGCTAAAGTTGCAAGTGATGTCAAGGCTGGAGATATAAAGGTCCTCTTTGTCAAGCCTCTAGTATATTGGACTCGGTTTTTCATTATTGCTACTGCATTCTCTCGCCCACAGATTGATGCCATTGG : GACCAGAGTAAGAGATATGGCTGAGGAACAATATGGAAGAGTTGCTTCTGGAGATTCAAAACCCAACTCGTGGACACTACTGGACTTTG : GTGATGTCGTTGTTCATCTATTTCTTCCTCCGCAGCGTGAGTACTACAACCTGGAAGAATTCTATGGCAATGCAGCATCCATCGAACTACCATTTGAGAACCAACAACAATTGCGAGGACCTACTGGTTATTGAAGTCCCAACAGTTATGGCCTCGTGGTGATTAACAGAAAGTGTAGCAAATTATGAGGCAATCACAGTGTTCCCCCGATTGCTGACAAGGAACGATTAACATATCTGGGCAAACTCTGTTGATCCACTGGTTGCGTTATTTTTCTTAAATTAGTAGTAAGATAAAGCTCTCTACTAAGTTGTCTCTGTAGAAGTATTGGTTAAGAAATAGTTTACAAGCATTCTGAACTAATAAGGGCTCATTGTCACGTTTGATGAAAGAACCTAACATCCTGCTTCTTTTTCCCTTGATGTGAGTTGAGTTTAAATGAAGAATGAGGATTTAAAT</gDNA_template>
            <first_frame> A  T  E  F  P  H  T  I  L  S  C  A  V  S  S  K  V  E  I  S  Y  R  K  M  K  V  H  S  C  I  H  P  L  P  S  T  P  S  T  G  I  L  V  S  A  G  P  A  E  A  K  L  A  A  N  T  R  K  L  Y  S  L  T  L  N  S  S  N  Y  V  P  F  P  Y  K  D  Q  K  F  S  R  S  S  S  T  D  F  S  R  T  A  I  G  S  :  N  V  S  E  D  T  D  D  M  F  D  D  L  L  R  T  H  G  K  V  V  Y  K  R  N  D  Q  K  P  A  S  E  E  I  D  D  D  A  E  S  L  S   : F  A  M  A  V  A  K  V  A  S  D  V  K  A  G  D  I  K  V  L  F  V  K  P  L  V  Y  W  T  R  F  F  I  I  A  T  A  F  S  R  P  Q  I  D  A  I  G :   T  R  V  R  D  M  A  E  E  Q  Y  G  R  V  A  S  G  D  S  K  P  N  S  W  T  L  L  D  F   : G  D  V  V  V  H  L  F  L  P  P  Q  R  E  Y  Y  N  L  E  E  F  Y  G  N  A  A  S  I  E  L  P  F  E  N  Q  Q  Q  L  R  G  P  T  G  Y  *  S  P  N  S  Y  G  L  V  V  I  N  R  K  C  S  K  L  *  G  N  H  S  V  P  P  I  A  D  K  E  R  L  T  Y  L  G  K  L  C  *  S  T  G  C  V  I  F  L  K  L  V  V  R  *  S  S  L  L  S  C  L  C  R  S  I  G  *  E  I  V  Y  K  H  S  E  L  I  R  A  H  C  H  V  *  *  K  N  L  T  S  C  F  F  F  P  *  C  E  L  S  L  N  E  E  *  G  F  K  </first_frame>
            <second_frame>  Q  L  S  F  P  I  Q  S  S  L  V  Q  Y  L  L  K  L  K  S  R  I  E  K  *  K  Y  T  P  A  F  I  L  F  P  L  L  P  P  P  E  F  W  S  L  P  V  L  R  K  L  S  L  L  L  T  P  E  S  F  I  L  *  L  *  I  P  L  I  M  S  H  F  L  I  K  I  R  N  F  P  E  A  A  L  R  I  F  L  E  R  L  S  V  R :   M  *  V  K  I  Q  M  T  C  L  M  I  S  *  E  R  M  A  K  W  Y  T  K  E  M  T  K  N  L  Q  V  R  R  L  M  M  M  L  K  A  Y  R  :  L  Q  W  L  W  L  K  L  Q  V  M  S  R  L  E  I  *  R  S  S  L  S  S  L  *  Y  I  G  L  G  F  S  L  L  L  L  H  S  L  A  H  R  L  M  P  L   : G  P  E  *  E  I  W  L  R  N  N  M  E  E  L  L  L  E  I  Q  N  P  T  R  G  H  Y  W  T  L  :  V  M  S  L  F  I  Y  F  F  L  R  S  V  S  T  T  T  W  K  N  S  M  A  M  Q  H  P  S  N  Y  H  L  R  T  N  N  N  C  E  D  L  L  V  I  E  V  P  T  V  M  A  S  W  *  L  T  E  S  V  A  N  Y  E  A  I  T  V  F  P  R  L  L  T  R  N  D  *  H  I  W  A  N  S  V  D  P  L  V  A  L  F  F  L  N  *  *  *  D  K  A  L  Y  *  V  V  S  V  E  V  L  V  K  K  *  F  T  S  I  L  N  *  *  G  L  I  V  T  F  D  E  R  T  *  H  P  A  S  F  S  L  D  V  S  *  V  *  M  K  N  E  D  L  N </second_frame>
            <third_frame>   N  *  V  S  P  Y  N  P  L  L  C  S  I  F  *  S  *  N  L  V  *  K  N  E  S  T  L  L  H  S  S  S  S  L  Y  S  L  H  R  N  F  G  L  C  R  S  C  G  S  *  A  C  C  *  H  Q  K  A  L  F  F  N  F  E  F  L  *  L  C  P  I  S  L  *  R  S  E  I  F  Q  K  Q  L  Y  G  F  F  *  N  G  Y  R  F   : E  C  K  *  R  Y  R  *  H  V  *  *  S  P  K  N  A  W  Q  S  G  I  Q  K  K  *  P  K  T  C  K  *  G  D  *  *  *  C  *  K  P  I  V :   C  N  G  C  G  *  S  C  K  *  C  Q  G  W  R  Y  K  G  P  L  C  Q  A  S  S  I  L  D  S  V  F  H  Y  C  Y  C  I  L  S  P  T  D  *  C  H  W  :  D  Q  S  K  R  Y  G  *  G  T  I  W  K  S  C  F  W  R  F  K  T  Q  L  V  D  T  T  G  L  W :   *  C  R  C  S  S  I  S  S  S  A  A  *  V  L  Q  P  G  R  I  L  W  Q  C  S  I  H  R  T  T  I  *  E  P  T  T  I  A  R  T  Y  W  L  L  K  S  Q  Q  L  W  P  R  G  D  *  Q  K  V  *  Q  I  M  R  Q  S  Q  C  S  P  D  C  *  Q  G  T  I  N  I  S  G  Q  T  L  L  I  H  W  L  R  Y  F  S  *  I  S  S  K  I  K  L  S  T  K  L  S  L  *  K  Y  W  L  R  N  S  L  Q  A  F  *  T  N  K  G  S  L  S  R  L  M  K  E  P  N  I  L  L  L  F  P  L  M  *  V  E  F  K  *  R  M  R  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57016" stop="57297"/>
                    <exon start="58240" stop="58366"/>
                    <exon start="59218" stop="59356"/>
                    <exon start="59493" stop="59581"/>
                    <exon start="60259" stop="60392"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATEFPHTILSCAVSSKVEISYRKMKVHSCIHPLPSTPSTGILVSAGPAEAKLAANTRKLYSLTLNSSNYVPFPYKDQKFSRSSSTDFSRTAIGSNVSEDTDDMFDDLLRTHGKVVYKRNDQKPASEEIDDDAESLSFAMAVAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGTRVRDMAEEQYGRVASGDSKPNSWTLLDFGDVVVHLFLPPQREYYNLEEFYGNAASIELPFENQQQLRGPTGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="64683" PGL_stop="60918"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64683" e_stop="64513"/>
            <exon e_start="64168" e_stop="63071"/>
            <exon e_start="61915" e_stop="61538"/>
            <exon e_start="61251" e_stop="60918"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.860" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64683" e_stop="64513" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64512" i_stop="64169" i_length="344"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="64168" e_stop="63071" e_length="1098"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.860">
            <gDNA_intron_boundary i_start="63070" i_stop="61916" i_length="1155"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61915" e_stop="61538" e_length="378"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="61537" i_stop="61252" i_length="286"/>
          </intron>
          <exon e_serial="4" e_score="0.964">
            <gDNA_exon_boundary e_start="61251" e_stop="60918" e_length="334"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64683" stop="64513"/>
              <exon start="64168" stop="63071"/>
              <exon start="61915" stop="61538"/>
              <exon start="61251" stop="60918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321835" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGGCCCCAATAATTTCTGTCTCCGGCGATCAGCTGAACGACGGTACTGGTCCTCCCTTTTCGACTTGTGCCTTTTTTTCGCTCTATTCCTCTCGCATTTGGATTCCTCCTCTCTCGAGATTGAGACCTACATGCTTGGTGAAACCGGTTGCAGTGCAACGTCTGCCTATG : TGGGTATGGTCTCGAGTTAATATATTTCAGCACAAGCAGTGCAAAATCTAGAGGATTTCATGGCAGGCAATGGCCTGCCAGCTCTGGGTCGTGTGAAGCTCAGTGATTTGGTACCATTGGAAGGTCTTCCTTCTGATTCGTATAAATTATCTGTCTCAACTTTGTCACAGTCATTGGCTCAGTATTCAGCTGCCATTATACAGCTATCCACAAGTGATGGAGCTCTTTTAAGGTCTAGTCTAGAGTCTGCCCGACTTTACTTTCAACACAAACCCTCTTATCCTGCAGCGGATGTTATTCATTCTGATGATTCTCAGGAGTGGTGTAAGACCTCTGGTTACCATGCAGATCCTCAACAATGGCAAGAAACATATGATTTCAGGCCAGGGCTCACTCCTTCGGAACCCACCACTGAAATTGAATTCCCTCCTGCTGGTTTGGCTGACATATTCTCTTTGCTTGGTAGAGCAGCAAGGGATATATTGGACGCCATCAGCTTCTATTTAAATCTGCGTAGCTCTCCATTTACTGAAATACTTGATAATGTTCCACTCAGAAATCGAGAAACATCATCCTCTGTATTATCCGTCTGTTGTCATTCCAGGCCATCTTTTCAGGGTGCTCAGCACCATGGCCTGACAACTCAAGAGGATGGTCATTTGGGGATGTTCTCGGATCATGAGCATCAGGTTGACAGAAGCCTTGTTACAATTGTTAAGTCGGATAGGCCTGGTCTACATGTAAGAGATTTTCATGGTCACTGGGTTCTTGTGGATGGTGATCTTGGCCCCCAAGAAGCAATTGTTTATCCTGGCCTTGCATTATATCAGGCAACTGCGGGCTATATCAGCCCTGCACTTCATCGGACAGACATTGGTAATCAGCAGGGTAGCATATATGGACGCTGTTCTCTCTCTTTTAAACTTATGCCCAAGTCCATGACCAACCTCAATTGTTCAGAAATGCGGGCTGCTGGTCATGGGGTTGAAGCTCAATTCCAGCTTCCCGTACCAGTTGATGACTTCATGCAGAGATCAACTGATCAGTTGCTTAACAGGAGCAATTTCCCTACATTCAACTTTCCAACAGTCCAAGATG : GATCTATGAAGCCCATGATGAGGAGAAGGAAGAGTAACTCAAGATCTAAACCTCTTCCACCTTCAAAGAGGTTGAGATTGGAGGCACAAAGAGTTCTCAAAGAGAGAGTTCAAGACATAGCTGATAAAAAGGGCATTAAGCTGAGGTTCTGCACCTTAAAGGATTGTGAAAGTCACATCCAGTCACTTGATAGCCCATGTACGAACATAAGAATGGAAATTGGATGGCCACCGGGAGTTCCATTTGTTCACCCACATGATCTCCCAAATAAGGCTAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGTCTGCAACTCATGATATGGAGTTGAGCCTAATCGATCCCGGACAGCCAAGTCAACACACTTCTAACT : GAATCTATGTTGCTATCAGAATGCTGCCTGATGAGTGCTTGGATTCATTATACCAATATTTGTCTGCTTAGTTATGCTCGTCTCATGCAGATCTTGCTAATTTGTATATGAACTTCAATTAAGATATGAATGCACAATGAACTGTTCCTTTGTTTATCGTAATCGTTGTCCCTGTACATATTAGTTTGTAAAATTTGATGGAATATTAGTTGTAAATTCCGAATGTACTCCTAGTTTTCTCGGCTCTCATATCTTAGCTCTTGTGGAGCATTTTATGTTGGCCAAAGAGTTTGAATTTATATAGTGGTTGGATCTTAGAAGCTAACTTAACTTC</gDNA_template>
            <first_frame> M  A  P  I  I  S  V  S  G  D  Q  L  N  D  G  T  G  P  P  F  S  T  C  A  F  F  S  L  Y  S  S  R  I  W  I  P  P  L  S  R  L  R  P  T  C  L  V  K  P  V  A  V  Q  R  L  P  M  :  W  V  W  S  R  V  N  I  F  Q  H  K  Q  C  K  I  *  R  I  S  W  Q  A  M  A  C  Q  L  W  V  V  *  S  S  V  I  W  Y  H  W  K  V  F  L  L  I  R  I  N  Y  L  S  Q  L  C  H  S  H  W  L  S  I  Q  L  P  L  Y  S  Y  P  Q  V  M  E  L  F  *  G  L  V  *  S  L  P  D  F  T  F  N  T  N  P  L  I  L  Q  R  M  L  F  I  L  M  I  L  R  S  G  V  R  P  L  V  T  M  Q  I  L  N  N  G  K  K  H  M  I  S  G  Q  G  S  L  L  R  N  P  P  L  K  L  N  S  L  L  L  V  W  L  T  Y  S  L  C  L  V  E  Q  Q  G  I  Y  W  T  P  S  A  S  I  *  I  C  V  A  L  H  L  L  K  Y  L  I  M  F  H  S  E  I  E  K  H  H  P  L  Y  Y  P  S  V  V  I  P  G  H  L  F  R  V  L  S  T  M  A  *  Q  L  K  R  M  V  I  W  G  C  S  R  I  M  S  I  R  L  T  E  A  L  L  Q  L  L  S  R  I  G  L  V  Y  M  *  E  I  F  M  V  T  G  F  L  W  M  V  I  L  A  P  K  K  Q  L  F  I  L  A  L  H  Y  I  R  Q  L  R  A  I  S  A  L  H  F  I  G  Q  T  L  V  I  S  R  V  A  Y  M  D  A  V  L  S  L  L  N  L  C  P  S  P  *  P  T  S  I  V  Q  K  C  G  L  L  V  M  G  L  K  L  N  S  S  F  P  Y  Q  L  M  T  S  C  R  D  Q  L  I  S  C  L  T  G  A  I  S  L  H  S  T  F  Q  Q  S  K  M  :  D  L  *  S  P  *  *  G  E  G  R  V  T  Q  D  L  N  L  F  H  L  Q  R  G  *  D  W  R  H  K  E  F  S  K  R  E  F  K  T  *  L  I  K  R  A  L  S  *  G  S  A  P  *  R  I  V  K  V  T  S  S  H  L  I  A  H  V  R  T  *  E  W  K  L  D  G  H  R  E  F  H  L  F  T  H  M  I  S  Q  I  R  L  R  L  D  F  L  K  H  M  N  L  V  G  L  Q  L  M  I  W  S  *  A  *  S  I  P  D  S  Q  V  N  T  L  L  T  :  E  S  M  L  L  S  E  C  C  L  M  S  A  W  I  H  Y  T  N  I  C  L  L  S  Y  A  R  L  M  Q  I  L  L  I  C  I  *  T  S  I  K  I  *  M  H  N  E  L  F  L  C  L  S  *  S  L  S  L  Y  I  L  V  C  K  I  *  W  N  I  S  C  K  F  R  M  Y  S  *  F  S  R  L  S  Y  L  S  S  C  G  A  F  Y  V  G  Q  R  V  *  I  Y  I  V  V  G  S  *  K  L  T  *  L  </first_frame>
            <second_frame>  W  P  Q  *  F  L  S  P  A  I  S  *  T  T  V  L  V  L  P  F  R  L  V  P  F  F  R  S  I  P  L  A  F  G  F  L  L  S  R  D  *  D  L  H  A  W  *  N  R  L  Q  C  N  V  C  L  C :   G  Y  G  L  E  L  I  Y  F  S  T  S  S  A  K  S  R  G  F  H  G  R  Q  W  P  A  S  S  G  S  C  E  A  Q  *  F  G  T  I  G  R  S  S  F  *  F  V  *  I  I  C  L  N  F  V  T  V  I  G  S  V  F  S  C  H  Y  T  A  I  H  K  *  W  S  S  F  K  V  *  S  R  V  C  P  T  L  L  S  T  Q  T  L  L  S  C  S  G  C  Y  S  F  *  *  F  S  G  V  V  *  D  L  W  L  P  C  R  S  S  T  M  A  R  N  I  *  F  Q  A  R  A  H  S  F  G  T  H  H  *  N  *  I  P  S  C  W  F  G  *  H  I  L  F  A  W  *  S  S  K  G  Y  I  G  R  H  Q  L  L  F  K  S  A  *  L  S  I  Y  *  N  T  *  *  C  S  T  Q  K  S  R  N  I  I  L  C  I  I  R  L  L  S  F  Q  A  I  F  S  G  C  S  A  P  W  P  D  N  S  R  G  W  S  F  G  D  V  L  G  S  *  A  S  G  *  Q  K  P  C  Y  N  C  *  V  G  *  A  W  S  T  C  K  R  F  S  W  S  L  G  S  C  G  W  *  S  W  P  P  R  S  N  C  L  S  W  P  C  I  I  S  G  N  C  G  L  Y  Q  P  C  T  S  S  D  R  H  W  *  S  A  G  *  H  I  W  T  L  F  S  L  F  *  T  Y  A  Q  V  H  D  Q  P  Q  L  F  R  N  A  G  C  W  S  W  G  *  S  S  I  P  A  S  R  T  S  *  *  L  H  A  E  I  N  *  S  V  A  *  Q  E  Q  F  P  Y  I  Q  L  S  N  S  P  R  W :   I  Y  E  A  H  D  E  E  K  E  E  *  L  K  I  *  T  S  S  T  F  K  E  V  E  I  G  G  T  K  S  S  Q  R  E  S  S  R  H  S  *  *  K  G  H  *  A  E  V  L  H  L  K  G  L  *  K  S  H  P  V  T  *  *  P  M  Y  E  H  K  N  G  N  W  M  A  T  G  S  S  I  C  S  P  T  *  S  P  K  *  G  *  D  W  I  S  *  N  I  *  T  W  L  V  C  N  S  *  Y  G  V  E  P  N  R  S  R  T  A  K  S  T  H  F  *  L :   N  L  C  C  Y  Q  N  A  A  *  *  V  L  G  F  I  I  P  I  F  V  C  L  V  M  L  V  S  C  R  S  C  *  F  V  Y  E  L  Q  L  R  Y  E  C  T  M  N  C  S  F  V  Y  R  N  R  C  P  C  T  Y  *  F  V  K  F  D  G  I  L  V  V  N  S  E  C  T  P  S  F  L  G  S  H  I  L  A  L  V  E  H  F  M  L  A  K  E  F  E  F  I  *  W  L  D  L  R  S  *  L  N  F </second_frame>
            <third_frame>   G  P  N  N  F  C  L  R  R  S  A  E  R  R  Y  W  S  S  L  F  D  L  C  L  F  F  A  L  F  L  S  H  L  D  S  S  S  L  E  I  E  T  Y  M  L  G  E  T  G  C  S  A  T  S  A  Y   : V  G  M  V  S  S  *  Y  I  S  A  Q  A  V  Q  N  L  E  D  F  M  A  G  N  G  L  P  A  L  G  R  V  K  L  S  D  L  V  P  L  E  G  L  P  S  D  S  Y  K  L  S  V  S  T  L  S  Q  S  L  A  Q  Y  S  A  A  I  I  Q  L  S  T  S  D  G  A  L  L  R  S  S  L  E  S  A  R  L  Y  F  Q  H  K  P  S  Y  P  A  A  D  V  I  H  S  D  D  S  Q  E  W  C  K  T  S  G  Y  H  A  D  P  Q  Q  W  Q  E  T  Y  D  F  R  P  G  L  T  P  S  E  P  T  T  E  I  E  F  P  P  A  G  L  A  D  I  F  S  L  L  G  R  A  A  R  D  I  L  D  A  I  S  F  Y  L  N  L  R  S  S  P  F  T  E  I  L  D  N  V  P  L  R  N  R  E  T  S  S  S  V  L  S  V  C  C  H  S  R  P  S  F  Q  G  A  Q  H  H  G  L  T  T  Q  E  D  G  H  L  G  M  F  S  D  H  E  H  Q  V  D  R  S  L  V  T  I  V  K  S  D  R  P  G  L  H  V  R  D  F  H  G  H  W  V  L  V  D  G  D  L  G  P  Q  E  A  I  V  Y  P  G  L  A  L  Y  Q  A  T  A  G  Y  I  S  P  A  L  H  R  T  D  I  G  N  Q  Q  G  S  I  Y  G  R  C  S  L  S  F  K  L  M  P  K  S  M  T  N  L  N  C  S  E  M  R  A  A  G  H  G  V  E  A  Q  F  Q  L  P  V  P  V  D  D  F  M  Q  R  S  T  D  Q  L  L  N  R  S  N  F  P  T  F  N  F  P  T  V  Q  D   : G  S  M  K  P  M  M  R  R  R  K  S  N  S  R  S  K  P  L  P  P  S  K  R  L  R  L  E  A  Q  R  V  L  K  E  R  V  Q  D  I  A  D  K  K  G  I  K  L  R  F  C  T  L  K  D  C  E  S  H  I  Q  S  L  D  S  P  C  T  N  I  R  M  E  I  G  W  P  P  G  V  P  F  V  H  P  H  D  L  P  N  K  A  K  I  G  F  L  E  T  Y  E  P  G  W  S  A  T  H  D  M  E  L  S  L  I  D  P  G  Q  P  S  Q  H  T  S  N   : *  I  Y  V  A  I  R  M  L  P  D  E  C  L  D  S  L  Y  Q  Y  L  S  A  *  L  C  S  S  H  A  D  L  A  N  L  Y  M  N  F  N  *  D  M  N  A  Q  *  T  V  P  L  F  I  V  I  V  V  P  V  H  I  S  L  *  N  L  M  E  Y  *  L  *  I  P  N  V  L  L  V  F  S  A  L  I  S  *  L  L  W  S  I  L  C  W  P  K  S  L  N  L  Y  S  G  W  I  L  E  A  N  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64148" stop="63071"/>
                    <exon start="61915" stop="61538"/>
                    <exon start="61251" stop="61250"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1455</number_coding_nucleotides>
                  <number_encoded_amino_acids>485</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YISAQAVQNLEDFMAGNGLPALGRVKLSDLVPLEGLPSDSYKLSVSTLSQSLAQYSAAIIQLSTSDGALLRSSLESARLYFQHKPSYPAADVIHSDDSQEWCKTSGYHADPQQWQETYDFRPGLTPSEPTTEIEFPPAGLADIFSLLGRAARDILDAISFYLNLRSSPFTEILDNVPLRNRETSSSVLSVCCHSRPSFQGAQHHGLTTQEDGHLGMFSDHEHQVDRSLVTIVKSDRPGLHVRDFHGHWVLVDGDLGPQEAIVYPGLALYQATAGYISPALHRTDIGNQQGSIYGRCSLSFKLMPKSMTNLNCSEMRAAGHGVEAQFQLPVPVDDFMQRSTDQLLNRSNFPTFNFPTVQDGSMKPMMRRRKSNSRSKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKDCESHIQSLDSPCTNIRMEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWSATHDMELSLIDPGQPSQHTSN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64683" stop="64513"/>
                    <exon start="64168" stop="64118"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAPIISVSGDQLNDGTGPPFSTCAFFSLYSSRIWIPPLSRLRPTCLVKPVAVQRLPMWVWSRVNIFQHKQCKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="62661" e_stop="62225"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="62661" e_stop="62225" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62661" stop="62225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346913" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAAGAACCTCAACACAGCATTCCTTCTTCTTCTTCTTACGAGGAATCTAAGACATCTTGACTTGTATTAGGATCATCTATGCACTAAAAACTCAAAAGAAGGATTCAATTCATCTTAAGTTTCTGTAAGGAGCTGTTTGTAGCTTCAAAATATCTTTAATTTCTTTCCTTCCAATCCGAAAAAAGTACTTGGTGTTAATTTTGAAGATTTATTTAGAACAAAAACAAAATGCTGACTGAAGCTGGTGTCTCACGTATGATTGGTCAGAAATATGAAAAGTTTTGTGACAAGCTTAGCCGTTTTTCATAATTAAAAGTGAAAGGTCTTAGTTTTGCTTGTTGAGGACCTGAAGGACTGTTATTATCTCGAATATCTGGAAATGACTTTCAAACATGGTCAAAGTAGATAAAGCAGCCTCTATTGGTTTAATCATG</gDNA_template>
            <first_frame> R  K  E  P  Q  H  S  I  P  S  S  S  S  Y  E  E  S  K  T  S  *  L  V  L  G  S  S  M  H  *  K  L  K  R  R  I  Q  F  I  L  S  F  C  K  E  L  F  V  A  S  K  Y  L  *  F  L  S  F  Q  S  E  K  S  T  W  C  *  F  *  R  F  I  *  N  K  N  K  M  L  T  E  A  G  V  S  R  M  I  G  Q  K  Y  E  K  F  C  D  K  L  S  R  F  S  *  L  K  V  K  G  L  S  F  A  C  *  G  P  E  G  L  L  L  S  R  I  S  G  N  D  F  Q  T  W  S  K  *  I  K  Q  P  L  L  V  *  S   </first_frame>
            <second_frame>  E  K  N  L  N  T  A  F  L  L  L  L  L  T  R  N  L  R  H  L  D  L  Y  *  D  H  L  C  T  K  N  S  K  E  G  F  N  S  S  *  V  S  V  R  S  C  L  *  L  Q  N  I  F  N  F  F  P  S  N  P  K  K  V  L  G  V  N  F  E  D  L  F  R  T  K  T  K  C  *  L  K  L  V  S  H  V  *  L  V  R  N  M  K  S  F  V  T  S  L  A  V  F  H  N  *  K  *  K  V  L  V  L  L  V  E  D  L  K  D  C  Y  Y  L  E  Y  L  E  M  T  F  K  H  G  Q  S  R  *  S  S  L  Y  W  F  N  H  </second_frame>
            <third_frame>   K  R  T  S  T  Q  H  S  F  F  F  F  L  R  G  I  *  D  I  L  T  C  I  R  I  I  Y  A  L  K  T  Q  K  K  D  S  I  H  L  K  F  L  *  G  A  V  C  S  F  K  I  S  L  I  S  F  L  P  I  R  K  K  Y  L  V  L  I  L  K  I  Y  L  E  Q  K  Q  N  A  D  *  S  W  C  L  T  Y  D  W  S  E  I  *  K  V  L  *  Q  A  *  P  F  F  I  I  K  S  E  R  S  *  F  C  L  L  R  T  *  R  T  V  I  I  S  N  I  W  K  *  L  S  N  M  V  K  V  D  K  A  A  S  I  G  L  I  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0017L19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="71577" PGL_stop="65028"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71577" e_stop="71432"/>
            <exon e_start="70316" e_stop="69824"/>
            <exon e_start="69505" e_stop="69362"/>
            <exon e_start="68550" e_stop="68310"/>
            <exon e_start="67270" e_stop="66770"/>
            <exon e_start="65803" e_stop="65028"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.876" acc_prob="0.806" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71577" e_stop="71432" e_length="146"/>
          </exon>
          <intron i_serial="1" don_prob="0.876" acc_prob="0.806">
            <gDNA_intron_boundary i_start="71431" i_stop="70317" i_length="1115"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70316" e_stop="69824" e_length="493"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.997">
            <gDNA_intron_boundary i_start="69823" i_stop="69506" i_length="318"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="69505" e_stop="69362" e_length="144"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.989">
            <gDNA_intron_boundary i_start="69361" i_stop="68551" i_length="811"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68550" e_stop="68310" e_length="241"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.979">
            <gDNA_intron_boundary i_start="68309" i_stop="67271" i_length="1039"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67270" e_stop="66770" e_length="501"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.973">
            <gDNA_intron_boundary i_start="66769" i_stop="65804" i_length="966"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="65803" e_stop="65028" e_length="776"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71577" stop="71432"/>
              <exon start="70316" stop="69824"/>
              <exon start="69505" stop="69362"/>
              <exon start="68550" stop="68310"/>
              <exon start="67270" stop="66770"/>
              <exon start="65803" stop="65028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318131" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACACTCTCCAATACCTGCAGTGAAGAGAAAAATATAATACTCTTAACACTGGGGCCTCTCATGGCGTAGCGTGGGTTTGACTATGTTTGCAGCCTTTTGTTTTCCTTTCCCAATTTCATATCGAGTTTAGGCTGCTTGTGTGAG : AAATATGGATCGAGCAAGGTTAAATAAAAGAACCCATTGCTCAGGTTCAACACCGTCAGAGGAGTCAGCCTTAGATCTTGAAAAATACTGTTGCAGTTATTCTAATCTTCCTTCACTTAGTCCACCAACACTTCAACCTTATGCATCGGCTGGACAACACTCTGAGAGTAATGCTGCATACTTCTCCTGGCCTAGTCGGCTAAATGATGCTGCTGAAGAGAGAGCAAACTATTTCGGAAATCTTCAGAAAGGGGTTTTGCCAGAAACTCTTGGCCGATTGCCCGAGGGGCAGCGAGCAACAACCTTACTTGACCTCATGACTATAAGGGCATCTCATAGCAAACTCTTGCGTTGCTACAGTCTCGGTACAGCAATTGGTTTTCGTATTCGACGTGGTGTTTTGACTGATATACCAGCAATACTAGTGTTTGTATCCCGGAAAGTTCACAAACAATGGCTTAGTCCAATCCAGTGTCTACCTACTGCTTTAGAG : GGCCCTGGAGGTGTGTGGTGTGAAGTGGATGTGGTCGAGTTCTCCTATTTTGGTGCACCAGAGCCAACACCCAAGGAGCAGTTGTACACAGAGATAGTCGATGACCTGCGGGGTAGTGACCCATATATTGGTTCAGGATCTCAG : GTAGCAAGCCAGGAGACATATGGAACCTTGGGCGCTATTGTGAGGAGTCTGTCAGGCAATCGACAAGTTGGTTTCCTAACAAACCGGCATGTTGCTGTTGACTTAGATTACCCAAATCAAAAAATGTTTCATCCTTTACCTCCAACATTAGGACCTGGAGTATATCTGGGTTCAGTGGAGAGAGCTACATCTTTTATCAGAGACGACCTTTGGTATGGCATATTTGCTGGCATAAATCCAG : AGACATTTGTCAGGGCAGATGGTGCATTCATTCCTTTCACAGATGATTTTGATATGACCTCTGTTACTACTTCTGTTAAGGGCATAGGGGAAATTGGAGATGTCAAAATTATAGATTTGCAATCTCCTATTAGTAGTCTCATCGGAAAGCAAGTGACGAAGGTCGGAAGAAGCTCTGGATTGACTACAGGCACTGTCTTGGCATATGCCCTTGAATATAATGATGAGAAAGGGATTTGCTTCTTGACTGATTTTCTTGTCAATGGAGAAAACCAGCAGACTTTTGACCTTGAAGGAGACAGTGGAAGTTTAATCGTTTTGAAGGGTGAGAATGGGGAAAAACCCCGACCAATTGGTATTATTTGGGGTGGAACTGCAAATAGGGGACGGCTTAAACTAAAGGTGGGACAATCTCCAGAAAATTGGACTAGTGGAGTTGACCTTGGGCGTCTGCTCAATTTCCTTGAACTTGATATCATTACCAAAGATGAAGCTCTAAAAG : TTGCAGTGCAAGAACAGAGAGCTGCCTCTGCCACAATGGTGGGCTCTACGGCTGGGGATTCTTCACCTCCTGATATAATGCTTCCAAAGGACAAAATAGAGCCTCTTGGGCTTCACATTCAACAAATTCCCTTGGAAGATGGCATTGGTGGCCCTGATATAAACTCTTCACCTGTGGAAGCTACATTTAACTTGGAAGAAAGTGGGATCAACTTTGATGCAAGTGTTGAACATCAATTCATTCCAAGCTTCAATGGGCAACCTCCGGCTAATCAAGACGACCATCGTGATAAGTCAGCATACGAGAATCTCTCAGCTCTTAGGAAAGGCTCTGATGAAGACATCAGCTTTTCCTTGCAGTTGGGTGGTCATGAATCCAAGAGAAGACGTTCAGAGCCTCCACCAAGCGCAGATGAACCAGAATGATTTTCTCCTTTTATCTGCTGGTACATTTAACTTTGAGGTCTTCCATGGAAAGGAAATGCATTTTGTGTTTGGTTCTAAAACAAGAAAGAGGTCCAATTTGGTTTTTGAGGTGCTAAATTTTCATCATATGGCCATTGATGGCAACCTGTGTATGAAGAGTTCTGTATTTGAACATCTCAGTAGTGCAAAATCCAATTGTAAAATACATGCAAGCTAAAAATGAGGCTGCTTTCTTGAGCTATTTTGATTCATGGCTCCATGCAGTAGACATAAAAATTTGCCTTTGATGTATATTTATGCTGGATATGTTAAGAAACCAAGTGTTTATATATATATATATATGTATTGCAA</gDNA_template>
            <first_frame> S  H  S  P  I  P  A  V  K  R  K  I  *  Y  S  *  H  W  G  L  S  W  R  S  V  G  L  T  M  F  A  A  F  C  F  P  F  P  I  S  Y  R  V  *  A  A  C  V  R :   N  M  D  R  A  R  L  N  K  R  T  H  C  S  G  S  T  P  S  E  E  S  A  L  D  L  E  K  Y  C  C  S  Y  S  N  L  P  S  L  S  P  P  T  L  Q  P  Y  A  S  A  G  Q  H  S  E  S  N  A  A  Y  F  S  W  P  S  R  L  N  D  A  A  E  E  R  A  N  Y  F  G  N  L  Q  K  G  V  L  P  E  T  L  G  R  L  P  E  G  Q  R  A  T  T  L  L  D  L  M  T  I  R  A  S  H  S  K  L  L  R  C  Y  S  L  G  T  A  I  G  F  R  I  R  R  G  V  L  T  D  I  P  A  I  L  V  F  V  S  R  K  V  H  K  Q  W  L  S  P  I  Q  C  L  P  T  A  L  E  :  G  P  G  G  V  W  C  E  V  D  V  V  E  F  S  Y  F  G  A  P  E  P  T  P  K  E  Q  L  Y  T  E  I  V  D  D  L  R  G  S  D  P  Y  I  G  S  G  S  Q  :  V  A  S  Q  E  T  Y  G  T  L  G  A  I  V  R  S  L  S  G  N  R  Q  V  G  F  L  T  N  R  H  V  A  V  D  L  D  Y  P  N  Q  K  M  F  H  P  L  P  P  T  L  G  P  G  V  Y  L  G  S  V  E  R  A  T  S  F  I  R  D  D  L  W  Y  G  I  F  A  G  I  N  P   : E  T  F  V  R  A  D  G  A  F  I  P  F  T  D  D  F  D  M  T  S  V  T  T  S  V  K  G  I  G  E  I  G  D  V  K  I  I  D  L  Q  S  P  I  S  S  L  I  G  K  Q  V  T  K  V  G  R  S  S  G  L  T  T  G  T  V  L  A  Y  A  L  E  Y  N  D  E  K  G  I  C  F  L  T  D  F  L  V  N  G  E  N  Q  Q  T  F  D  L  E  G  D  S  G  S  L  I  V  L  K  G  E  N  G  E  K  P  R  P  I  G  I  I  W  G  G  T  A  N  R  G  R  L  K  L  K  V  G  Q  S  P  E  N  W  T  S  G  V  D  L  G  R  L  L  N  F  L  E  L  D  I  I  T  K  D  E  A  L  K   : V  A  V  Q  E  Q  R  A  A  S  A  T  M  V  G  S  T  A  G  D  S  S  P  P  D  I  M  L  P  K  D  K  I  E  P  L  G  L  H  I  Q  Q  I  P  L  E  D  G  I  G  G  P  D  I  N  S  S  P  V  E  A  T  F  N  L  E  E  S  G  I  N  F  D  A  S  V  E  H  Q  F  I  P  S  F  N  G  Q  P  P  A  N  Q  D  D  H  R  D  K  S  A  Y  E  N  L  S  A  L  R  K  G  S  D  E  D  I  S  F  S  L  Q  L  G  G  H  E  S  K  R  R  R  S  E  P  P  P  S  A  D  E  P  E  *  F  S  P  F  I  C  W  Y  I  *  L  *  G  L  P  W  K  G  N  A  F  C  V  W  F  *  N  K  K  E  V  Q  F  G  F  *  G  A  K  F  S  S  Y  G  H  *  W  Q  P  V  Y  E  E  F  C  I  *  T  S  Q  *  C  K  I  Q  L  *  N  T  C  K  L  K  M  R  L  L  S  *  A  I  L  I  H  G  S  M  Q  *  T  *  K  F  A  F  D  V  Y  L  C  W  I  C  *  E  T  K  C  L  Y  I  Y  I  Y  V  L  Q </first_frame>
            <second_frame>  H  T  L  Q  Y  L  Q  *  R  E  K  Y  N  T  L  N  T  G  A  S  H  G  V  A  W  V  *  L  C  L  Q  P  F  V  F  L  S  Q  F  H  I  E  F  R  L  L  V  *   : E  I  W  I  E  Q  G  *  I  K  E  P  I  A  Q  V  Q  H  R  Q  R  S  Q  P  *  I  L  K  N  T  V  A  V  I  L  I  F  L  H  L  V  H  Q  H  F  N  L  M  H  R  L  D  N  T  L  R  V  M  L  H  T  S  P  G  L  V  G  *  M  M  L  L  K  R  E  Q  T  I  S  E  I  F  R  K  G  F  C  Q  K  L  L  A  D  C  P  R  G  S  E  Q  Q  P  Y  L  T  S  *  L  *  G  H  L  I  A  N  S  C  V  A  T  V  S  V  Q  Q  L  V  F  V  F  D  V  V  F  *  L  I  Y  Q  Q  Y  *  C  L  Y  P  G  K  F  T  N  N  G  L  V  Q  S  S  V  Y  L  L  L  *  R :   A  L  E  V  C  G  V  K  W  M  W  S  S  S  P  I  L  V  H  Q  S  Q  H  P  R  S  S  C  T  Q  R  *  S  M  T  C  G  V  V  T  H  I  L  V  Q  D  L  R :   *  Q  A  R  R  H  M  E  P  W  A  L  L  *  G  V  C  Q  A  I  D  K  L  V  S  *  Q  T  G  M  L  L  L  T  *  I  T  Q  I  K  K  C  F  I  L  Y  L  Q  H  *  D  L  E  Y  I  W  V  Q  W  R  E  L  H  L  L  S  E  T  T  F  G  M  A  Y  L  L  A  *  I  Q  :  R  H  L  S  G  Q  M  V  H  S  F  L  S  Q  M  I  L  I  *  P  L  L  L  L  L  L  R  A  *  G  K  L  E  M  S  K  L  *  I  C  N  L  L  L  V  V  S  S  E  S  K  *  R  R  S  E  E  A  L  D  *  L  Q  A  L  S  W  H  M  P  L  N  I  M  M  R  K  G  F  A  S  *  L  I  F  L  S  M  E  K  T  S  R  L  L  T  L  K  E  T  V  E  V  *  S  F  *  R  V  R  M  G  K  N  P  D  Q  L  V  L  F  G  V  E  L  Q  I  G  D  G  L  N  *  R  W  D  N  L  Q  K  I  G  L  V  E  L  T  L  G  V  C  S  I  S  L  N  L  I  S  L  P  K  M  K  L  *  K  :  L  Q  C  K  N  R  E  L  P  L  P  Q  W  W  A  L  R  L  G  I  L  H  L  L  I  *  C  F  Q  R  T  K  *  S  L  L  G  F  T  F  N  K  F  P  W  K  M  A  L  V  A  L  I  *  T  L  H  L  W  K  L  H  L  T  W  K  K  V  G  S  T  L  M  Q  V  L  N  I  N  S  F  Q  A  S  M  G  N  L  R  L  I  K  T  T  I  V  I  S  Q  H  T  R  I  S  Q  L  L  G  K  A  L  M  K  T  S  A  F  P  C  S  W  V  V  M  N  P  R  E  D  V  Q  S  L  H  Q  A  Q  M  N  Q  N  D  F  L  L  L  S  A  G  T  F  N  F  E  V  F  H  G  K  E  M  H  F  V  F  G  S  K  T  R  K  R  S  N  L  V  F  E  V  L  N  F  H  H  M  A  I  D  G  N  L  C  M  K  S  S  V  F  E  H  L  S  S  A  K  S  N  C  K  I  H  A  S  *  K  *  G  C  F  L  E  L  F  *  F  M  A  P  C  S  R  H  K  N  L  P  L  M  Y  I  Y  A  G  Y  V  K  K  P  S  V  Y  I  Y  I  Y  M  Y  C   </second_frame>
            <third_frame>   T  L  S  N  T  C  S  E  E  K  N  I  I  L  L  T  L  G  P  L  M  A  *  R  G  F  D  Y  V  C  S  L  L  F  S  F  P  N  F  I  S  S  L  G  C  L  C  E  :  K  Y  G  S  S  K  V  K  *  K  N  P  L  L  R  F  N  T  V  R  G  V  S  L  R  S  *  K  I  L  L  Q  L  F  *  S  S  F  T  *  S  T  N  T  S  T  L  C  I  G  W  T  T  L  *  E  *  C  C  I  L  L  L  A  *  S  A  K  *  C  C  *  R  E  S  K  L  F  R  K  S  S  E  R  G  F  A  R  N  S  W  P  I  A  R  G  A  A  S  N  N  L  T  *  P  H  D  Y  K  G  I  S  *  Q  T  L  A  L  L  Q  S  R  Y  S  N  W  F  S  Y  S  T  W  C  F  D  *  Y  T  S  N  T  S  V  C  I  P  E  S  S  Q  T  M  A  *  S  N  P  V  S  T  Y  C  F  R   : G  P  W  R  C  V  V  *  S  G  C  G  R  V  L  L  F  W  C  T  R  A  N  T  Q  G  A  V  V  H  R  D  S  R  *  P  A  G  *  *  P  I  Y  W  F  R  I  S   : G  S  K  P  G  D  I  W  N  L  G  R  Y  C  E  E  S  V  R  Q  S  T  S  W  F  P  N  K  P  A  C  C  C  *  L  R  L  P  K  S  K  N  V  S  S  F  T  S  N  I  R  T  W  S  I  S  G  F  S  G  E  S  Y  I  F  Y  Q  R  R  P  L  V  W  H  I  C  W  H  K  S  R :   D  I  C  Q  G  R  W  C  I  H  S  F  H  R  *  F  *  Y  D  L  C  Y  Y  F  C  *  G  H  R  G  N  W  R  C  Q  N  Y  R  F  A  I  S  Y  *  *  S  H  R  K  A  S  D  E  G  R  K  K  L  W  I  D  Y  R  H  C  L  G  I  C  P  *  I  *  *  *  E  R  D  L  L  L  D  *  F  S  C  Q  W  R  K  P  A  D  F  *  P  *  R  R  Q  W  K  F  N  R  F  E  G  *  E  W  G  K  T  P  T  N  W  Y  Y  L  G  W  N  C  K  *  G  T  A  *  T  K  G  G  T  I  S  R  K  L  D  *  W  S  *  P  W  A  S  A  Q  F  P  *  T  *  Y  H  Y  Q  R  *  S  S  K  S :   C  S  A  R  T  E  S  C  L  C  H  N  G  G  L  Y  G  W  G  F  F  T  S  *  Y  N  A  S  K  G  Q  N  R  A  S  W  A  S  H  S  T  N  S  L  G  R  W  H  W  W  P  *  Y  K  L  F  T  C  G  S  Y  I  *  L  G  R  K  W  D  Q  L  *  C  K  C  *  T  S  I  H  S  K  L  Q  W  A  T  S  G  *  S  R  R  P  S  *  *  V  S  I  R  E  S  L  S  S  *  E  R  L  *  *  R  H  Q  L  F  L  A  V  G  W  S  *  I  Q  E  K  T  F  R  A  S  T  K  R  R  *  T  R  M  I  F  S  F  Y  L  L  V  H  L  T  L  R  S  S  M  E  R  K  C  I  L  C  L  V  L  K  Q  E  R  G  P  I  W  F  L  R  C  *  I  F  I  I  W  P  L  M  A  T  C  V  *  R  V  L  Y  L  N  I  S  V  V  Q  N  P  I  V  K  Y  M  Q  A  K  N  E  A  A  F  L  S  Y  F  D  S  W  L  H  A  V  D  I  K  I  C  L  *  C  I  F  M  L  D  M  L  R  N  Q  V  F  I  Y  I  Y  I  C  I  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71445" stop="71432"/>
                    <exon start="70316" stop="69824"/>
                    <exon start="69505" stop="69362"/>
                    <exon start="68550" stop="68310"/>
                    <exon start="67270" stop="66770"/>
                    <exon start="65803" stop="65379"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1815</number_coding_nucleotides>
                  <number_encoded_amino_acids>605</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AACVRNMDRARLNKRTHCSGSTPSEESALDLEKYCCSYSNLPSLSPPTLQPYASAGQHSESNAAYFSWPSRLNDAAEERANYFGNLQKGVLPETLGRLPEGQRATTLLDLMTIRASHSKLLRCYSLGTAIGFRIRRGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALEGPGGVWCEVDVVEFSYFGAPEPTPKEQLYTEIVDDLRGSDPYIGSGSQVASQETYGTLGAIVRSLSGNRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGSVERATSFIRDDLWYGIFAGINPETFVRADGAFIPFTDDFDMTSVTTSVKGIGEIGDVKIIDLQSPISSLIGKQVTKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVNGENQQTFDLEGDSGSLIVLKGENGEKPRPIGIIWGGTANRGRLKLKVGQSPENWTSGVDLGRLLNFLELDIITKDEALKVAVQEQRAASATMVGSTAGDSSPPDIMLPKDKIEPLGLHIQQIPLEDGIGGPDINSSPVEATFNLEESGINFDASVEHQFIPSFNGQPPANQDDHRDKSAYENLSALRKGSDEDISFSLQLGGHESKRRRSEPPPSADEPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71416" e_stop="70862"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="71416" e_stop="70862" e_length="555"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71416" stop="70862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342590" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTTTTCCTCTCGAAGAATCCATCACTATTGCGATTGATCTTCCTTTTTTCACTTTCTCTTCTTCATGCAGAGATATCTTCACACGCCCATGTTTTTTTTTTGAATTTTCCAGGACCCCATTAATTTTGTTCCCTCAATTTGTACTGTGCACAATCGTTATCAAAATAAGTGCTTTTTCAATATTACTGTATTTATTATCCGTTTTTCCTCTCAAGTGTTTCTTTTCACTTTTCCTGTTCCTGGTTTTGTTGCTTTTCCTTGGTTATATATGTTTGGCTGAGAACTTTTTGTTTTTATTTCCGTTGTTGGAGAAATAGGATATATTGGACCTCACCTAGTTTGGGATTGAAGCATAGTTATTGACATATTGTTGATTGATTATGGTTGTTGTTGAACTTATTATCTATTTCTGTTGAGAAAGATACCTGTTTTCTTAGGGCCATGTTGATTGTTGAGGCAGTTTTATCATCTTATGAAGTTCATTCTTTCAGATTTTAAAGTAGCTGAGAGAAATGATGTGATGGATAATATTGTTGTAAGCTGTGGCTAACT</gDNA_template>
            <first_frame> F  F  F  L  S  K  N  P  S  L  L  R  L  I  F  L  F  S  L  S  L  L  H  A  E  I  S  S  H  A  H  V  F  F  L  N  F  P  G  P  H  *  F  C  S  L  N  L  Y  C  A  Q  S  L  S  K  *  V  L  F  Q  Y  Y  C  I  Y  Y  P  F  F  L  S  S  V  S  F  H  F  S  C  S  W  F  C  C  F  S  L  V  I  Y  V  W  L  R  T  F  C  F  Y  F  R  C  W  R  N  R  I  Y  W  T  S  P  S  L  G  L  K  H  S  Y  *  H  I  V  D  *  L  W  L  L  L  N  L  L  S  I  S  V  E  K  D  T  C  F  L  R  A  M  L  I  V  E  A  V  L  S  S  Y  E  V  H  S  F  R  F  *  S  S  *  E  K  *  C  D  G  *  Y  C  C  K  L  W  L  T </first_frame>
            <second_frame>  F  F  S  S  R  R  I  H  H  Y  C  D  *  S  S  F  F  H  F  L  F  F  M  Q  R  Y  L  H  T  P  M  F  F  F  *  I  F  Q  D  P  I  N  F  V  P  S  I  C  T  V  H  N  R  Y  Q  N  K  C  F  F  N  I  T  V  F  I  I  R  F  S  S  Q  V  F  L  F  T  F  P  V  P  G  F  V  A  F  P  W  L  Y  M  F  G  *  E  L  F  V  F  I  S  V  V  G  E  I  G  Y  I  G  P  H  L  V  W  D  *  S  I  V  I  D  I  L  L  I  D  Y  G  C  C  *  T  Y  Y  L  F  L  L  R  K  I  P  V  F  L  G  P  C  *  L  L  R  Q  F  Y  H  L  M  K  F  I  L  S  D  F  K  V  A  E  R  N  D  V  M  D  N  I  V  V  S  C  G  *   </second_frame>
            <third_frame>   F  F  P  L  E  E  S  I  T  I  A  I  D  L  P  F  F  T  F  S  S  S  C  R  D  I  F  T  R  P  C  F  F  F  E  F  S  R  T  P  L  I  L  F  P  Q  F  V  L  C  T  I  V  I  K  I  S  A  F  S  I  L  L  Y  L  L  S  V  F  P  L  K  C  F  F  S  L  F  L  F  L  V  L  L  L  F  L  G  Y  I  C  L  A  E  N  F  L  F  L  F  P  L  L  E  K  *  D  I  L  D  L  T  *  F  G  I  E  A  *  L  L  T  Y  C  *  L  I  M  V  V  V  E  L  I  I  Y  F  C  *  E  R  Y  L  F  S  *  G  H  V  D  C  *  G  S  F  I  I  L  *  S  S  F  F  Q  I  L  K  *  L  R  E  M  M  *  W  I  I  L  L  *  A  V  A  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71414" stop="71097"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFPLEESITIAIDLPFFTFSSSCRDIFTRPCFFFEFSRTPLILFPQFVLCTIVIKISAFSILLYLLSVFPLKCFFSLFLFLVLLLFLGYICLAENFLFLFPLLEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="72921" PGL_stop="72440"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72921" e_stop="72440"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="72921" e_stop="72440" e_length="482"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72921" stop="72440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346168" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCCATCTCTGCAATATTCATCTTCTCTATATCATATTTAAGTTTTTTTTTAATTAATGAAACCAAGAAGGAAGGAAGAAATTAAGAGAAGATGAAGAAGCTGAATTTGTTATTGAGGAAGTGTAAGACTTTGTCAAGGCAACTAGGAAGAAGCTCATCTTATAGTAGTTTAAGGTCAAAATCTGCAAGAGAAGATTTTTGGAATGTGGAAGATAATATGGAAGATTTTGAGACAATTCTTGTTGGCAACTCAAGAAGGAAATATGTCATAAAATCAAAATACTTGAGCCATCCACTATTGAATGCTCTAATAGAGAAATCAAAGCAAAAGCATGGGGAAAAAGATCATCTTTCCGTTAAGTGTGAAGTTGTGCTTTTTGATCATCTTCTCTGGTTACTTGAAAATGCTGATCCTATCAACCTTAATTCTGATTCATTTGAGGAATTGGCTGATCTATATGTTGTTTAATGTGAATAATTT</gDNA_template>
            <first_frame> F  P  S  L  Q  Y  S  S  S  L  Y  H  I  *  V  F  F  *  L  M  K  P  R  R  K  E  E  I  K  R  R  *  R  S  *  I  C  Y  *  G  S  V  R  L  C  Q  G  N  *  E  E  A  H  L  I  V  V  *  G  Q  N  L  Q  E  K  I  F  G  M  W  K  I  I  W  K  I  L  R  Q  F  L  L  A  T  Q  E  G  N  M  S  *  N  Q  N  T  *  A  I  H  Y  *  M  L  *  *  R  N  Q  S  K  S  M  G  K  K  I  I  F  P  L  S  V  K  L  C  F  L  I  I  F  S  G  Y  L  K  M  L  I  L  S  T  L  I  L  I  H  L  R  N  W  L  I  Y  M  L  F  N  V  N  N   </first_frame>
            <second_frame>  F  H  L  C  N  I  H  L  L  Y  I  I  F  K  F  F  F  N  *  *  N  Q  E  G  R  K  K  L  R  E  D  E  E  A  E  F  V  I  E  E  V  *  D  F  V  K  A  T  R  K  K  L  I  L  *  *  F  K  V  K  I  C  K  R  R  F  L  E  C  G  R  *  Y  G  R  F  *  D  N  S  C  W  Q  L  K  K  E  I  C  H  K  I  K  I  L  E  P  S  T  I  E  C  S  N  R  E  I  K  A  K  A  W  G  K  R  S  S  F  R  *  V  *  S  C  A  F  *  S  S  S  L  V  T  *  K  C  *  S  Y  Q  P  *  F  *  F  I  *  G  I  G  *  S  I  C  C  L  M  *  I  I  </second_frame>
            <third_frame>   S  I  S  A  I  F  I  F  S  I  S  Y  L  S  F  F  L  I  N  E  T  K  K  E  G  R  N  *  E  K  M  K  K  L  N  L  L  L  R  K  C  K  T  L  S  R  Q  L  G  R  S  S  S  Y  S  S  L  R  S  K  S  A  R  E  D  F  W  N  V  E  D  N  M  E  D  F  E  T  I  L  V  G  N  S  R  R  K  Y  V  I  K  S  K  Y  L  S  H  P  L  L  N  A  L  I  E  K  S  K  Q  K  H  G  E  K  D  H  L  S  V  K  C  E  V  V  L  F  D  H  L  L  W  L  L  E  N  A  D  P  I  N  L  N  S  D  S  F  E  E  L  A  D  L  Y  V  V  *  C  E  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0017L19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72835" stop="72452"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKMKKLNLLLRKCKTLSRQLGRSSSYSSLRSKSAREDFWNVEDNMEDFETILVGNSRRKYVIKSKYLSHPLLNALIEKSKQKHGEKDHLSVKCEVVLFDHLLWLLENADPINLNSDSFEELADLYVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 25 chains have been computed
$ 
$ memory statistics:
$ 43136 bytes spliced alignments in total
$ 20 spliced alignments have been stored
$ 2156 bytes was the average size of a spliced alignment
$ 19976 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1816 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 28 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-13 10:01:52
-->
