<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-11-22 17:04:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E424560" ref_strand="-" ref_description="SGN-E424560 [STM-43-D8]">
      <seq>gaagcagcccaaattgcaacctaggagaacctacattcagcgtgttgaagagatcaccaaaaacagccggaagcaggatgttgccatagaaagaatattaaaagaaacaagggagcttcagttggagagcaactctgtccaagaacggcttaatcgaactcatgcagtggtggatgaaacagtattcagggaggcaaaaaaggaccaagtgggacaacaagcttacaggatactgactaacatccatgacagctttgaacaaatagctgaaaatcttcttgcaacagatagagcccgacgagaagtgtctgactatgaaggcaaacttgcaattatggtgtctcgaagtgttgatattgacaagatgaaagcagatcttgataccatcaggagggaaaatgatcttctagaaaagaaattgtccaaagactcatcgcaaagtgtagggtagaacagttgaattgattggttatttaagatgaatgttatgaacacttaggtttcattttatgctgtaatgttctagtaacacatacacacattgatctacctatcagctttttgtggaatccattgccgagtgataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="5223" stop="3937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4923" g_stop="4735" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4734" i_stop="4645" i_length="90">
            <donor d_prob="0.963" d_score="0.90"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4644" g_stop="4237" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="588" r_length="399" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E424560" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E424560" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="4923" e_stop="4735"/>
          <exon e_start="4644" e_stop="4237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCAGCCCAAATTACAACCTAGAAGAACCTACATTCAGCGTGTTGAAGAGATCACCAAAAACAGCCGGAAGCAGGATGTGGACATAGAAAGAATATTAAAAGAAACAAGGGAGCTTCAGTTAGAGAGCAACTTTGTCCAAGAACGGCTTAATCGAACTCGTGCAGTGGTTGATGAGACCGTGTTCAGGTACAATCTTTTGATATGCTGGTGACCACGAATTTAACATCTTCACGAGTGTGTAGATTATCTGATGTAAATTGTTTGATCTTTTACAAGGGAGGTAAAAAAGGACCAAGTGGGAGAACAAGCTTACAGGATACTGACTAACATCCATGACAGCTTTGAACAAATAGCTGAAAATCTTCTTGCAACGGATAGAACTCGGCGAGAAGTGACTGATTATGAAGGTAAACTTGCAAACATGGCACCTCGAAGTGTTAATATTGACAAGCTGAAAGCAGATCTTGACACCATCAGGAGGGAAAATGATCTTCTAGAAAAGAAATTATCCTAAGACTCATCACAAAGTATAGGGTAGAACAGTTGGAGTTGATTGATTATTTAAGATGAATGTTATGAACACTGGGTTTTCATTTTATGCTGTAATGTTCTAGTAACACACACACACATACGCACATTGATCTACCTATCAACTTTTTGTGGAATCCATTGCCGGGTTATAAT</genome_strand>
        <mrna_strand>GAAGCAGCCCAAATTGCAACCTAGGAGAACCTACATTCAGCGTGTTGAAGAGATCACCAAAAACAGCCGGAAGCAGGATGTTGCCATAGAAAGAATATTAAAAGAAACAAGGGAGCTTCAGTTGGAGAGCAACTCTGTCCAAGAACGGCTTAATCGAACTCATGCAGTGGTGGATGAAACAGTATTCAG..........................................................................................GGAGGCAAAAAAGGACCAAGTGGGACAACAAGCTTACAGGATACTGACTAACATCCATGACAGCTTTGAACAAATAGCTGAAAATCTTCTTGCAACAGATAGAGCCCGACGAGAAGTGTCTGACTATGAAGGCAAACTTGCAATTATGGTGTCTCGAAGTGTTGATATTGACAAGATGAAAGCAGATCTTGATACCATCAGGAGGGAAAATGATCTTCTAGAAAAGAAATTGTCCAAAGACTCATCGCAAAGTGTAGGGTAGAACAGTT-GAATTGATTGGTTATTTAAGATGAATGTTATGAACACTTAGGTTTCATTTTATGCTGTAATGTTCTAGT-------A-ACACATACACACATTGATCTACCTATCAGCTTTTTGTGGAATCCATTGCCGAGTGATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274540" ref_strand="+" ref_description="SGN-E274540 [cLEN-11-D16]">
      <seq>ttttgagtatggacaaggacaacaatcaacttcaccatgtgagcatttgcctcagacgaactgcaagacggaaactttacgagatcaaaaggaaatgcttgtggagaattcagtctcaagctctgttcaattacaagaactgcaagaaaaacttgatttattgaaagcagcagttgaaatggcttctgatcacaaacatcccagtgacttttatgtgaatcagctaaacgatcaggtggaagtgaaaaggggcaaaattgttgaaatggaaagtcactgcattgatagaagcaaggcccttgagcaaaagaaggtttctcttgaggaaaagttaagagcaacaaatccagagacctatgaaaaatataaaaaggtggaagagattgagttgaagttggagaatatattagccgaaaacaaaagaagagaggaagaactcattgtactctcagccaaggctgagaagcagcccaaattacaacctagaagaacctacattcagcgtgttgaagagatcaccaaaaacagccggaagcaggatgtggacatagaaagaatattaaaagaaacaagggagcttcagttagagagcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="6252" stop="4488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5952" g_stop="5898" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5897" i_stop="5671" i_length="227">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5670" g_stop="5447" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="279" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5446" i_stop="5345" i_length="102">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5344" g_stop="5198" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="426" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5197" i_stop="4960" i_length="238">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4959" g_stop="4788" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="598" r_length="172" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E274540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5952" e_stop="5898"/>
          <exon e_start="5670" e_stop="5447"/>
          <exon e_start="5344" e_stop="5198"/>
          <exon e_start="4959" e_stop="4788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGTATGGACAAGGACAACAATCAACTTCACCATGTGAGCATTTGCCTCAGGTACTTAATTATGAATGGATTGCATTGCTCTTTAGTATATTGTGGTAGACCTTTTACGCTTTGAGCTAGTTGTCCAATAGAGCAGAACAAGCCAATAATTTTTTAATTGGAGCATATAAAGATAACAGAAATAGGGAACAAACAATGATACTATTTGATTTCGTGGTTAGGCATTGGGAAAGCCTCCAACTTGTCGTCTTATCTTCTAAATTCATGCCATATTGCAGACGAACTGCAAGACGGAAACTTTACGAGATCAAAAGGAAATGCTTGTGGAGAATTCAGTCTCAAGCTCTGTTCAATTACAAGAACTGCAAGAAAAACTTGATTTATTGAAAGCAGCAGTTGAAATGGCTTCTGATCACAAACATCCCAGTGACTTTTATGTGAATCAGCTAAACGATCAGGTGGAAGTGAAAAGGGGCAAAATTGTTGAAATGGAAAGTCACTGGTAGGATACTGACGTTTCTATATTTTAAACATTTTTACTTATATTTCCCCTATTGAAACTTGGATGATATCAATTGTTAAGCCTTTTTAAAATATTGTACAGCATTGATAGAAGCAAGGCCCTTGAGCAAAAGAAGGTTTCTCTTGAGGAAAAGTTAAGAGCAACAAATCCAGAGACCTATGAAAAATATAAAAAGGTGGAAGAGATTGAGTTGAAGTTGGAGAATATATTAGCCGAAAACAAAAGAAGGTACGATCTTCTATTAGGTCATGCAAAATATCCGTCGTTTGTTAGATTACATAGTTGAACCAAAAGAGAAATTGAGAGAAGAAACTGTACCATTTTTGGTTTTTTATCGTTTGGATTCTTTGACATTTAAGAATTTTCATTACTCATTATGGAAAGGGGTCAAGTTGTGTGGATCTATTTGTATATCCGAGCTTTTAATGCTGCTTTGTTTGAAAGTTTGGTATGCGTAACTCTGCAGAGAGGAAGAACTCATTGTACTCTCAGCCAAGGCTGAGAAGCAGCCCAAATTACAACCTAGAAGAACCTACATTCAGCGTGTTGAAGAGATCACCAAAAACAGCCGGAAGCAGGATGTGGACATAGAAAGAATATTAAAAGAAACAAGGGAGCTTCAGTTAGAGAGCAACTTT</genome_strand>
        <mrna_strand>TTTTGAGTATGGACAAGGACAACAATCAACTTCACCATGTGAGCATTTGCCTCAG...................................................................................................................................................................................................................................ACGAACTGCAAGACGGAAACTTTACGAGATCAAAAGGAAATGCTTGTGGAGAATTCAGTCTCAAGCTCTGTTCAATTACAAGAACTGCAAGAAAAACTTGATTTATTGAAAGCAGCAGTTGAAATGGCTTCTGATCACAAACATCCCAGTGACTTTTATGTGAATCAGCTAAACGATCAGGTGGAAGTGAAAAGGGGCAAAATTGTTGAAATGGAAAGTCACTG......................................................................................................CATTGATAGAAGCAAGGCCCTTGAGCAAAAGAAGGTTTCTCTTGAGGAAAAGTTAAGAGCAACAAATCCAGAGACCTATGAAAAATATAAAAAGGTGGAAGAGATTGAGTTGAAGTTGGAGAATATATTAGCCGAAAACAAAAGAAG..............................................................................................................................................................................................................................................AGAGGAAGAACTCATTGTACTCTCAGCCAAGGCTGAGAAGCAGCCCAAATTACAACCTAGAAGAACCTACATTCAGCGTGTTGAAGAGATCACCAAAAACAGCCGGAAGCAGGATGTGGACATAGAAAGAATATTAAAAGAAACAAGGGAGCTTCAGTTAGAGAGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327102" ref_strand="+" ref_description="SGN-E327102 [cTOC-18-L20]">
      <seq>acaagatgaaatcgaggacttgtcgttgtcccttccaactgttggctcaatgcagattgctggaagtaacggttttggacataacatagagttcatgtctcaagcttatcttagaaacagaagctctgaaattgatatagaagttgaacatgatacgtctatcgctcatatagatcaacctcttcccatattcctcaagtttgcaaatgtggagtataaggtgaagactaatcaagctttctccaacaatcctgtcaaggcagttgtctcaaaggtagcttctcagtttgaaaatgataattacaaacatatactcaaaggtataacgggaagcattagtcccggtgaaattcttgccttaatgggaccttcgggcagtggaaaaacgactttgttaaagatactgggtggaagattgcacgaaaatgtcaaaggaaccgtcacttacaatgacattccatatagtccagctctgaaaagaagggtgggtttcgtgacacaagatgatgtgcttttcccacaattgacggttgaggaaactttagtttttgctgcattcttaagacttccatgcaagatgagtcgacgtcagaagtatgaaagagtagaagtgattattaaggaattaggccttgaaagtactttgntatcctttcatgtacttgagtactcactaatagcaactaccgttgcaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="7432" stop="8932"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7732" g_stop="7930" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7931" i_stop="7999" i_length="69">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8000" g_stop="8283" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="483" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8284" i_stop="8417" i_length="134">
            <donor d_prob="0.636" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8418" g_stop="8632" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="697" r_length="214" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E327102" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7732" e_stop="7930"/>
          <exon e_start="8000" e_stop="8283"/>
          <exon e_start="8418" e_stop="8632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGATGAAATCGAGGACTTGTCGTTGTCCCTTCCAACTGTTGGCTCAATGCAGATTGCTGGAAGTAACGGTTTTGGACATAACATAGAGTTCATGTCTCAAGCTTATCTTAGAAACAGAAGCTCTGAAATTGATATAGAAGTTGAACATGATACGTCTATCGCTCATATAGATCAACCTCTTCCCATATTCCTCAAGGTACGATCTTCTTTCATGATATATGCTTACGAGTCGTGGCTTCTGTAATGGGAATGGTTTTGTATGCAGTTTGCAAATGTGGAGTATAAGGTGAAGACTAATCAAGCTTTCTCCAACAATCCTGTCAAGGCAGTTGTCTCAAAGGTAGCTTCTCAGTTTGAAAATGATAATTACAAACATATACTCAAAGGTATAACGGGAAGCATTAGTCCCGGTGAAATTCTTGCCTTAATGGGACCTTCGGGCAGTGGAAAAACGACTTTGTTAAAGATACTGGGTGGAAGATTGCACGAAAATGTCAAAGGAACCGTCACTTACAATGACATTCCATATAGTCCAGCTCTGAAAAGAAGGTGGTACCTATCCATCAATAGAGAAAAAAGTGTTCTTTTAATTGCTGTCTTTAACCAGAGAGTAGATACAAGTTTTTCTTTCAGTGTACATGGATTTGTATTAACTTCAGTTTGCGATATGTGCTTATGTCTAGGGTGGGTTTCGTGACACAAGATGATGTGCTTTTCCCACAATTGACGGTTGAGGAAACTTTAGTTTTTGCTGCATTCTTAAGACTTCCATGCAAGATGAGTCGACGTCAGAAGTATGAAAGAGTAGAAGTGATTATTAAGGAATTAGGCCTTGAAAGGTACTTTGTTATCCTTTCATGTACTTGAGTACTCACTAATAGCAACTACCGTTGCAACT</genome_strand>
        <mrna_strand>ACAAGATGAAATCGAGGACTTGTCGTTGTCCCTTCCAACTGTTGGCTCAATGCAGATTGCTGGAAGTAACGGTTTTGGACATAACATAGAGTTCATGTCTCAAGCTTATCTTAGAAACAGAAGCTCTGAAATTGATATAGAAGTTGAACATGATACGTCTATCGCTCATATAGATCAACCTCTTCCCATATTCCTCAAG.....................................................................TTTGCAAATGTGGAGTATAAGGTGAAGACTAATCAAGCTTTCTCCAACAATCCTGTCAAGGCAGTTGTCTCAAAGGTAGCTTCTCAGTTTGAAAATGATAATTACAAACATATACTCAAAGGTATAACGGGAAGCATTAGTCCCGGTGAAATTCTTGCCTTAATGGGACCTTCGGGCAGTGGAAAAACGACTTTGTTAAAGATACTGGGTGGAAGATTGCACGAAAATGTCAAAGGAACCGTCACTTACAATGACATTCCATATAGTCCAGCTCTGAAAAGAAG......................................................................................................................................GGTGGGTTTCGTGACACAAGATGATGTGCTTTTCCCACAATTGACGGTTGAGGAAACTTTAGTTTTTGCTGCATTCTTAAGACTTCCATGCAAGATGAGTCGACGTCAGAAGTATGAAAGAGTAGAAGTGATTATTAAGGAATTAGGCCTTGAAA-GTACTTTGNTATCCTTTCATGTACTTGAGTACTCACTAATAGCAACTACCGTTGCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418123" ref_strand="+" ref_description="SGN-E418123 [STM-26-N16]">
      <seq>aaaaattcccattgggggattcacaaatctgacaaattcttcttgtgtcagcttagtccaaaaatacgctcaaccctgcaaattccctttaaaaaatcttactgcaaaacttaaagtcaccattaatggtcaagaaagtcaatcttaagaattttcccatttttcaagaagcatagtcataaaaattgagtcttttgagttttctgaggagaaaaaaacaatctttatcagaaattaatggagctgataccttattcagacccaaaatctgaatcaagtgttgttaatccaccttggcaagatatgtttagatcagcttcaatgaggaaaccagaagaaccaaaaccccagaacaaggttccttcagaggctcagccaagaaaggaaaatgacccaaatcaagattcagtgtctgctgatcctcaggtgagactagccctttatatagctatggctcatgctggacttgtattcacatttttcattatttatggtgttggtaaattgcttgaagagtatttgagagctatgttatgggctgtgctttgttcaattccattaaggggaattcaacaaacccttgttgcattttggtctgaacctttaaagttaggtcttactgagactattttagctgtccctgtagctgttttcagtgtttttctagggacccttgttgatattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="12372" stop="13661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12672" g_stop="13361" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E418123" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12672" e_stop="13361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTCCCATTGGGGGATTCACAAATCTGACAAATTCTTCCTCTGTCAGCTTAGTCCAAAAATACACTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGTAAAACTTAAAGTCACCATTAATGGTGAATCAAGAAAGTCAATCTTAAGAATTTTCCCATTTTTGAACAACCATAGTCATAAAGATTGAGTCTTTTGAGTTTTCTGAGGAAAAAAAAGCTATCTTTATCAGAAATTAATGGAGCTGGTGCCTTATTCAGACCCAAAAGCTGAATCAAGTGTTGTTAATCCACCTTGGGAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAGCCCCAGAACCAGGTCCCTTCAGAGGCTCAGCCAAGAAAAGAAAATGAACCAAATCAAGATTCAGTGTCTGCTGACCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCTGGACTTGTATTTACATTTTTCATTATTTATGGTGTTGGTAAATTGCTTGAAGAGTATTTGAGAGCTATGTTATGGGCTGTGCTTTGTTCAATTCCATTAAGGGGAATTCAACAAACCCTTGTTGCATTTTGGTCTGAACCTTTGAAGTTAGGTCTTACTGAGACTATTTTAGCTGTCCCTGTAGCTGTTTTCAGTGTTTTTCTAGGGACCCTTGTTGATATTAA</genome_strand>
        <mrna_strand>AAAAATTCCCATTGGGGGATTCACAAATCTGACAAATTCTTCTTGTGTCAGCTTAGTCCAAAAATACGCTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGCAAAACTTAAAGTCACCATTAAT-G-G--TCAAGAAAGTCAATCTTAAGAATTTTCCCATTTTTCAAGAAGCATAGTCATAAAAATTGAGTCTTTTGAGTTTTCTGAGGAGAAAAAAACAATCTTTATCAGAAATTAATGGAGCTGATACCTTATTCAGACCCAAAATCTGAATCAAGTGTTGTTAATCCACCTTGGCAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAACCCCAGAACAAGGTTCCTTCAGAGGCTCAGCCAAGAAAGGAAAATGACCCAAATCAAGATTCAGTGTCTGCTGATCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCTGGACTTGTATTCACATTTTTCATTATTTATGGTGTTGGTAAATTGCTTGAAGAGTATTTGAGAGCTATGTTATGGGCTGTGCTTTGTTCAATTCCATTAAGGGGAATTCAACAAACCCTTGTTGCATTTTGGTCTGAACCTTTAAAGTTAGGTCTTACTGAGACTATTTTAGCTGTCCCTGTAGCTGTTTTCAGTGTTTTTCTAGGGACCCTTGTTGATATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440949" ref_strand="+" ref_description="SGN-E440949 [cSTA-28-L3]">
      <seq>aaaaattcccattgggggattcaccaaatctgacaaattcttcttgtgtcagcttagtccaaaaataccgctcaaccctgcaaattccctttaaaaaatcttactgcaaaacttaaagtcaccattaatggtcaagaaagtcaatcttaagaattttccccatttttcaagaagcatagtcataaaaattgagtcttttgagttttctgaggagaaaaaaacaatctttatcagaaattaatggagctgatacccttattcagacccaaaatctgaatcaagtgttgttaatccaccttggcaagatatgtttagatcagcttcaatgaggaaaccagaagaacccaaaccccagaacaaggttccttcagaggctcagccaagaaaggaaaatgacccaaatcaagattcagtgtctgctgatcctcaggtgagactagccctttatatagctatggctcatgcctggacttgtattcacatttttcattatttatggtgttggtaaattgcttgaagagtatttgagagctatgttatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="12372" stop="13513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12672" g_stop="13213" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E440949" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12672" e_stop="13213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTCCCATTGGGGGATTCA-CAAATCTGACAAATTCTTCCTCTGTCAGCTTAGTCCAAAAATA-CACTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGTAAAACTTAAAGTCACCATTAATGGTGAATCAAGAAAGTCAATCTTAAGAATTTT-CCCATTTTTGAACAACCATAGTCATAAAGATTGAGTCTTTTGAGTTTTCTGAGGAAAAAAAAGCTATCTTTATCAGAAATTAATGGAGCTGGT-GCCTTATTCAGACCCAAAAGCTGAATCAAGTGTTGTTAATCCACCTTGGGAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAGCCCCAGAACCAGGTCCCTTCAGAGGCTCAGCCAAGAAAAGAAAATGAACCAAATCAAGATTCAGTGTCTGCTGACCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATG-CTGGACTTGTATTTACATTTTTCATTATTTATGGTGTTGGTAAATTGCTTGAAGAGTATTTGAGAGCTATGTTATGGG</genome_strand>
        <mrna_strand>AAAAATTCCCATTGGGGGATTCACCAAATCTGACAAATTCTTCTTGTGTCAGCTTAGTCCAAAAATACCGCTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGCAAAACTTAAAGTCACCATTAAT-G-G--TCAAGAAAGTCAATCTTAAGAATTTTCCCCATTTTTCAAGAAGCATAGTCATAAAAATTGAGTCTTTTGAGTTTTCTGAGGAGAAAAAAACAATCTTTATCAGAAATTAATGGAGCTGATACCCTTATTCAGACCCAAAATCTGAATCAAGTGTTGTTAATCCACCTTGGCAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCCAAACCCCAGAACAAGGTTCCTTCAGAGGCTCAGCCAAGAAAGGAAAATGACCCAAATCAAGATTCAGTGTCTGCTGATCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCCTGGACTTGTATTCACATTTTTCATTATTTATGGTGTTGGTAAATTGCTTGAAGAGTATTTGAGAGCTATGTTATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724598" ref_strand="+" ref_description="SGN-E724598 [FC24CD08]">
      <seq>ccaaaaatacactcaaccctgcaaattccctttaaaaaatcttactgtaaaacttaaagtcaccattaatggtgaatcaagaaagtcaatcttaagaattttcccatttttgaacaaccatagtcataaagattgagtcttttgagttttctgaggaaaaaaaagctatctttatcagaaattaatggacctggtgccttattcaaacccaaaagctgaatcaagtgttgttaatccaccttggaaaaatatgtttagatcagcttcaatgaggaaaccagaagaaccaaagccccagaaccaggtcccttcaaaggctcagccaagaaaagaaaatgaaccaaatcaagattcaatgtctgctgaccctcaggtgagactagccctttatatagctatggctcatgctggacttgtatttacatttttcattattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="12429" stop="13466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12729" g_stop="13166" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E724598" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12729" e_stop="13166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAATACACTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGTAAAACTTAAAGTCACCATTAATGGTGAATCAAGAAAGTCAATCTTAAGAATTTTCCCATTTTTGAACAACCATAGTCATAAAGATTGAGTCTTTTGAGTTTTCTGAGGAAAAAAAAGCTATCTTTATCAGAAATTAATGGAGCTGGTGCCTTATTCAGACCCAAAAGCTGAATCAAGTGTTGTTAATCCACCTTGGGAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAGCCCCAGAACCAGGTCCCTTCAGAGGCTCAGCCAAGAAAAGAAAATGAACCAAATCAAGATTCAGTGTCTGCTGACCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCTGGACTTGTATTTACATTTTTCATTATTTA</genome_strand>
        <mrna_strand>CCAAAAATACACTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGTAAAACTTAAAGTCACCATTAATGGTGAATCAAGAAAGTCAATCTTAAGAATTTTCCCATTTTTGAACAACCATAGTCATAAAGATTGAGTCTTTTGAGTTTTCTGAGGAAAAAAAAGCTATCTTTATCAGAAATTAATGGACCTGGTGCCTTATTCAAACCCAAAAGCTGAATCAAGTGTTGTTAATCCACCTTGGAAAAATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAGCCCCAGAACCAGGTCCCTTCAAAGGCTCAGCCAAGAAAAGAAAATGAACCAAATCAAGATTCAATGTCTGCTGACCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCTGGACTTGTATTTACATTTTTCATTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702579" ref_strand="+" ref_description="SGN-E702579 [FA19AE05]">
      <seq>atccccctctccttatgcagagaaactcttaagcctgaaaaggagggttaaagatcgtgaatgggcacaaatatatacagaagtggatgtaatgttcagggaacttctgatcactagagaggacttggttgagaaagccaaagggttcgctctccaaggagtaaatgtaatgcaacggatactggttagtagcacatctgtcttaggtgggagcatgaaggtcatgttcttgatcgggaattccatcgtttcgggtgctgctggtctttttaattttgtatctcagctaatggtattcatttgggtactttattatctcatcacatcggattctggtggagtaacagaacaagtcatgtctatgctccctatgtcacattccgcaaggaggcgaagtgttgaggttcttgacaaagctatttctggggttcttctagcaactgctgagattgcactctttcaggggtgtctaacttggctcttgttcagattattctccatacattttttgtacatgtcaacaatcctcgcatttcttagtcctttgtttcctattttcccatcactgttttcaactatcccagctgctttacagttggtgcttgaaggtcaatatgtattggccatcagcttatcaattatacatctcgtacttatggactatggtacatccgaaatcatggaggatatacctggctataacgcgtatctcactggtctcagcattattggaggaatgacattgttcccttcagcatttgagggagcaataatgggacccctgataactactgttgtgatcgcaattaaagatttgtatgttgaatttgtattggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="13695" stop="15850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13995" g_stop="14757" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14758" i_stop="15472" i_length="715">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15473" g_stop="15550" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="841" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E702579" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13995" e_stop="14757"/>
          <exon e_start="15473" e_stop="15550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCCCTCTCCTTATGCAGAGAAACTCTTAAGCCTGAAAAGGAGGGTTAAAGATCGTGAATGGGCACAAATATATACAGAAGTGGATGTAATGTTCAGGGAACTTCTGATCACTAGAGAGGACTTGGTTGAGAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTCTTAGGTGGGAGCATGAAGGTCATGTTCTTGATCGGGAATTCCATCGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAAGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATACATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACTATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAATATGTATTGGCCATCAGCTTATCAATTATACATCTCGTACTTATGGACTATGGTACATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAGGTAATCTAAAACATCACTCTCTCTTGAATTTCCATTATAACGTTCTTGCATTACTTAGTTACCTGTCAGGTTACCTCTCTTGTTGAGTATGAGGAAGGAAGTGAACTTGGAGAATTGGCAATGCCTATACATCAGATATTAAGATATCCCCAATATTAGACAGAAAAATGTGAACTTTAAAAGTCCTTCATTTACCTATCAAAAAGAGAAATATGATTGTCACGCGATGACAGGAAAGACGATAATTCTATTGGGGAGAGAAGCTATGAGTGCATTCCCTTTCAACCTTATTCTTAACTCCAGTTATTGTCTAGATCATGATTGTCTTGGAACTATGATGTATTACTTTTTTGTGAGTTCCACACCCCAACTATCAATTGCTTCCTTTTCCTACCTAAACTATCATCATTATATATTAAAACATGACTGATTGGGCCAACTATCAGTTGTTTCCTGTGTCGCCTTTTGCGCATGTATAAAGATGTCTATTTGCTTTATATGTCACTTCATGACTTGAGTGGTACCTGAAAGCACACCAAGGTGTGTTTTAATACGTAGATGCTCATAGTTCTTGTAGGGAAAGGGAACAACCAGTGGTTTTGTAAAAACAAGAAAAGTTCATGTGTGTTTTTGACCATTATCTCTTTCACTTGAGATGATTTCATTACCATAAAGGTCGCATCTTTGATATTAATTGTGTATTTATGTTGCACAGGGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAATTTGTATTGGAAGAA</genome_strand>
        <mrna_strand>ATCCCCCTCTCCTTATGCAGAGAAACTCTTAAGCCTGAAAAGGAGGGTTAAAGATCGTGAATGGGCACAAATATATACAGAAGTGGATGTAATGTTCAGGGAACTTCTGATCACTAGAGAGGACTTGGTTGAGAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTCTTAGGTGGGAGCATGAAGGTCATGTTCTTGATCGGGAATTCCATCGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAAGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATACATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACTATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAATATGTATTGGCCATCAGCTTATCAATTATACATCTCGTACTTATGGACTATGGTACATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAATAATGGGACCCCTGATAACTACTGTTGTGATCGCAATTAAAGATTTGTATGTTGAATTTGTATTGGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432769" ref_strand="+" ref_description="SGN-E432769 [STM-57-D19]">
      <seq>gtaaagccaaagggttcgctctccaaggagtaaatgtaatgcaacggatactggttagtagcacatctgttttaggtggaagcatgaaggtcgtgttcttgattgggaattccatagtttcgggtgctgctggtctttttaattttgtatctcagctaatggtattcatttgggtactttattatctcatcacatcggattctggtggagtaacagaacaggtcatgtctatgctccctatgtcacattccgcaaggaggcgaagtgttgaggttcttgacaaagctatttctggggttcttctagcaactgctgagattgcactctttcaggggtgtctaacttggctcttgttcagattattctccatccattttttgtacatgtcaacaatcctcgcatttcttagtcctttgtttcctattttcccatcactgttttcaaccatcccagctgctttacagttggtgcttgaaggtcagtatgtattggccatcagcttatcgattatacatctcatacttatggactatggtacatccgaaattatggaagatatacctggctataacgcgtatctcactggtctcagcattattggaggaatgacattgttcccttctgcatttganggagcaataatgggaccactgataactactgttgtgatcgcgattaaagatttgtatgttgagtttgtattggaagaacagaaggaataagtagaacnaatctgtgtttgcaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="13828" stop="15888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14126" g_stop="14757" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14758" i_stop="15472" i_length="715">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15473" g_stop="15588" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="748" r_length="116" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E432769" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14126" e_stop="14757"/>
          <exon e_start="15473" e_stop="15588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTCTTAGGTGGGAGCATGAAGGTCATGTTCTTGATCGGGAATTCCATCGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAAGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATACATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACTATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAATATGTATTGGCCATCAGCTTATCAATTATACATCTCGTACTTATGGACTATGGTACATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAGGTAATCTAAAACATCACTCTCTCTTGAATTTCCATTATAACGTTCTTGCATTACTTAGTTACCTGTCAGGTTACCTCTCTTGTTGAGTATGAGGAAGGAAGTGAACTTGGAGAATTGGCAATGCCTATACATCAGATATTAAGATATCCCCAATATTAGACAGAAAAATGTGAACTTTAAAAGTCCTTCATTTACCTATCAAAAAGAGAAATATGATTGTCACGCGATGACAGGAAAGACGATAATTCTATTGGGGAGAGAAGCTATGAGTGCATTCCCTTTCAACCTTATTCTTAACTCCAGTTATTGTCTAGATCATGATTGTCTTGGAACTATGATGTATTACTTTTTTGTGAGTTCCACACCCCAACTATCAATTGCTTCCTTTTCCTACCTAAACTATCATCATTATATATTAAAACATGACTGATTGGGCCAACTATCAGTTGTTTCCTGTGTCGCCTTTTGCGCATGTATAAAGATGTCTATTTGCTTTATATGTCACTTCATGACTTGAGTGGTACCTGAAAGCACACCAAGGTGTGTTTTAATACGTAGATGCTCATAGTTCTTGTAGGGAAAGGGAACAACCAGTGGTTTTGTAAAAACAAGAAAAGTTCATGTGTGTTTTTGACCATTATCTCTTTCACTTGAGATGATTTCATTACCATAAAGGTCGCATCTTTGATATTAATTGTGTATTTATGTTGCACAGGGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAATTTGTATTGGAAGAACAGAAGGAATAAGCAGAACAAATCTGTGTTTGCAATGC</genome_strand>
        <mrna_strand>GTAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTTTTAGGTGGAAGCATGAAGGTCGTGTTCTTGATTGGGAATTCCATAGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAGGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATCCATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACCATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAGTATGTATTGGCCATCAGCTTATCGATTATACATCTCATACTTATGGACTATGGTACATCCGAAATTATGGAAGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCTGCATTTGAN...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAGTTTGTATTGGAAGAACAGAAGGAATAAGTAGAACNAATCTGTGTTTGCAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E402220" ref_strand="+" ref_description="SGN-E402220 [PPC-7-I1]">
      <seq>gaaagccaaagggttcgctctccaaggagtaaatgtaatgcaacggatactggttagtagcacatctgttttaggtggaagcatgaaggtcgtgttcttgattgggaattccatagtttcgggtgctgctggtctttttaattttgtatctcagctaatggtattcatttgggtactttattatctcatcacatcggattctggtggagtaacagaacaggtcatgtctatgctccctatgtcacattccgcaatgaggctaactgttgaaggtcttgacaaagctatttctgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="13827" stop="14722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14127" g_stop="14422" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E402220" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E402220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14127" e_stop="14422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTCTTAGGTGGGAGCATGAAGGTCATGTTCTTGATCGGGAATTCCATCGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAAGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGG</genome_strand>
        <mrna_strand>GAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTTTTAGGTGGAAGCATGAAGGTCGTGTTCTTGATTGGGAATTCCATAGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAGGTCATGTCTATGCTCCCTATGTCACATTCCGCAATGAGGCTAACTGTTGAAGGTCTTGACAAAGCTATTTCTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432770" ref_strand="-" ref_description="SGN-E432770 [STM-57-D19]">
      <seq>attccgcaaggaggcgaagtgttgagggtcttgacaaagctatttctggggttcttctagcaactgctgagattgcactctttcaggggtgtctaacttggctcttgttcagattattctccatccattttttgtacatgtcaacaatcctcgcatttcttagtcctttgtttcctattttcccatcactgttttcaaccatcccagctgctttacagttggtgcttgaaggtcagtatgtattggccatcagcttatcgattatacatctcatacttatggactatggtacatccgaaattatggaagatatacctggctataacgcgtatctcactggtctcagcattattggaggaatgacattgttcccttctgcatttgagggagcaataatgggaccactgataactactgttgtgatcgcgattaaagatttgtatgttgagtttgtattggaagaacagaaggaataagtagaacaaatctgtgtttgcaatgccttaacctttgaagacattgaaaagaaccccctattactttctttgatggaaaagcattgcaagatgaagtgaatttttttttctcccagtcaactgttgtttgttttctacctgtgtttgaggatttttttttcttctcagaaaaagctgtttatagtgtgcagaagtttggtaaattattaaaattggagcatacaattgtatattgtatcttctttgtaaaatctttgatcttttgaagagaaatagaattgtttgacaaaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="14072" stop="16151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14372" g_stop="14757" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14758" i_stop="15472" i_length="715">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15473" g_stop="15859" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="772" r_length="386" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E432770" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432770" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14372" e_stop="14757"/>
          <exon e_start="15473" e_stop="15859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATACATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACTATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAATATGTATTGGCCATCAGCTTATCAATTATACATCTCGTACTTATGGACTATGGTACATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAGGTAATCTAAAACATCACTCTCTCTTGAATTTCCATTATAACGTTCTTGCATTACTTAGTTACCTGTCAGGTTACCTCTCTTGTTGAGTATGAGGAAGGAAGTGAACTTGGAGAATTGGCAATGCCTATACATCAGATATTAAGATATCCCCAATATTAGACAGAAAAATGTGAACTTTAAAAGTCCTTCATTTACCTATCAAAAAGAGAAATATGATTGTCACGCGATGACAGGAAAGACGATAATTCTATTGGGGAGAGAAGCTATGAGTGCATTCCCTTTCAACCTTATTCTTAACTCCAGTTATTGTCTAGATCATGATTGTCTTGGAACTATGATGTATTACTTTTTTGTGAGTTCCACACCCCAACTATCAATTGCTTCCTTTTCCTACCTAAACTATCATCATTATATATTAAAACATGACTGATTGGGCCAACTATCAGTTGTTTCCTGTGTCGCCTTTTGCGCATGTATAAAGATGTCTATTTGCTTTATATGTCACTTCATGACTTGAGTGGTACCTGAAAGCACACCAAGGTGTGTTTTAATACGTAGATGCTCATAGTTCTTGTAGGGAAAGGGAACAACCAGTGGTTTTGTAAAAACAAGAAAAGTTCATGTGTGTTTTTGACCATTATCTCTTTCACTTGAGATGATTTCATTACCATAAAGGTCGCATCTTTGATATTAATTGTGTATTTATGTTGCACAGGGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAATTTGTATTGGAAGAACAGAAGGAATAAGCAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAACATCGCAAGATAAAGTGAATTCTTTTTTCTCCCAGTCAACTATTGTTTGTATTCTACCTGTGTTTGAGGATTTTTTTTTTCTCTCAGAAAAAGCTGTTTATAGTGTGCAGAAAATTGGTAAATTATTAAAATTGGAGTATAGAATTGTGCATTGTATCTTCTTTGTAAAACCTTTAATCTTTTGAAGAGAAATAGAATTGTTTTGACATGTCATTT</genome_strand>
        <mrna_strand>ATTCCGCAAGGAGGCGAAGTGTTGAGGGTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATCCATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACCATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAGTATGTATTGGCCATCAGCTTATCGATTATACATCTCATACTTATGGACTATGGTACATCCGAAATTATGGAAGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCTGCATTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAGTTTGTATTGGAAGAACAGAAGGAATAAGTAGAACAAATCTGTGTTTGCAATGCCTTAACCTTTGAAGACATTGAAAAGAACCCCCTATTACTTTCTTTGATGGAAAAGCATTGCAAGATGAAGTGAATTTTTTTTTCTCCCAGTCAACTGTTGTTTGTTTTCTACCTGTGTTTGAGGATTTTTTTTTCTTCTCAGAAAAAGCTGTTTATAGTGTGCAGAAGTTTGGTAAATTATTAAAATTGGAGCATACAATTGTATATTGTATCTTCTTTGTAAAATCTTTGATCTTTTGAAGAGAAATAGAATTG-TTTGACAAAAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418124" ref_strand="-" ref_description="SGN-E418124 [STM-26-N16]">
      <seq>atccgaaattatggaggatatacctggttataacgcgtatctcactggtctcagcattattggaggaatgacattgttcccttctgcatttgagggagcaataatgggaccactgataactactgttgtgatcgcgattaaagatttgtatgttgagtttgtattggaagaacagaaggaataagtagaacaaatctgtgtttgcaatgcctgaacctttgaagacattgagaagaaccccctattactttctttgatggaaaagcattgcaagataaagtgaattcttttttctcccagtcaactgttgttagttttctacctgtgtttgaggattttcttttttttttctcagaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="14364" stop="16035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14664" g_stop="14757" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14758" i_stop="15472" i_length="715">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15473" g_stop="15736" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="361" r_length="267" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E418124" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418124" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14664" e_stop="14757"/>
          <exon e_start="15473" e_stop="15736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAGGTAATCTAAAACATCACTCTCTCTTGAATTTCCATTATAACGTTCTTGCATTACTTAGTTACCTGTCAGGTTACCTCTCTTGTTGAGTATGAGGAAGGAAGTGAACTTGGAGAATTGGCAATGCCTATACATCAGATATTAAGATATCCCCAATATTAGACAGAAAAATGTGAACTTTAAAAGTCCTTCATTTACCTATCAAAAAGAGAAATATGATTGTCACGCGATGACAGGAAAGACGATAATTCTATTGGGGAGAGAAGCTATGAGTGCATTCCCTTTCAACCTTATTCTTAACTCCAGTTATTGTCTAGATCATGATTGTCTTGGAACTATGATGTATTACTTTTTTGTGAGTTCCACACCCCAACTATCAATTGCTTCCTTTTCCTACCTAAACTATCATCATTATATATTAAAACATGACTGATTGGGCCAACTATCAGTTGTTTCCTGTGTCGCCTTTTGCGCATGTATAAAGATGTCTATTTGCTTTATATGTCACTTCATGACTTGAGTGGTACCTGAAAGCACACCAAGGTGTGTTTTAATACGTAGATGCTCATAGTTCTTGTAGGGAAAGGGAACAACCAGTGGTTTTGTAAAAACAAGAAAAGTTCATGTGTGTTTTTGACCATTATCTCTTTCACTTGAGATGATTTCATTACCATAAAGGTCGCATCTTTGATATTAATTGTGTATTTATGTTGCACAGGGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAATTTGTATTGGAAGAACAGAAGGAATAAGCAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAACATCGCAAGATAAAGTGAATTCTTTTTTCTCCCAGTCAACTATTGTTTGTATTCTACCTGTGTTTGAGGA--TT-TTTTTTTTCTCTCAGAAAAAG</genome_strand>
        <mrna_strand>ATCCGAAATTATGGAGGATATACCTGGTTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCTGCATTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAGTTTGTATTGGAAGAACAGAAGGAATAAGTAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAGCATTGCAAGATAAAGTGAATTCTTTTTTCTCCCAGTCAACTGTTGTTAGTTTTCTACCTGTGTTTGAGGATTTTCTTTTTTTTTTCTCAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323264" ref_strand="+" ref_description="SGN-E323264 [cTOB-28-J15]">
      <seq>ttttttttttgacatgagaaaacaattctatttctcttcaaaagattaaaggttttacaaagaagatacaatgcacaattctatactccaattttaataatttaccaattttctgcacactataaacagctttttctgagagaaaaaaaaaatcctcaaacacaggtagaatacaaacaatagttgactgggagaaaaaagaattcactttatcttgcgatgtttttccatcaaagaaagtaatagggggttcttctcaatgtcttcaaaggttcaggcattgcaaacacagatttgttctgcttattccttctgttcttccaatacaaattcaacatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="16156" stop="15226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15865" g_stop="15526" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323264" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>340</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15865" e_stop="15526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGAAAATGACATGTCAAAACAATTCTATTTCTCTTCAAAAGATTAAAGGTTTTACAAAGAAGATACAATGCACAATTCTATACTCCAATTTTAATAATTTACCAATTTTCTGCACACTATAAACAGCTTTTTCTGAGAGAAAAAAAAAATCCTCAAACACAGGTAGAATACAAACAATAGTTGACTGGGAGAAAAAAGAATTCACTTTATCTTGCGATGTTTTTCCATCAAAGAAAGTAATAGGGGGTTCTTCTCAATGTCTTCAAAGGTTCAGGCATTGCAAACACAGATTTGTTCTGCTTATTCCTTCTGTTCTTCCAATACAAATTCAACATAC</genome_strand>
        <mrna_strand>TTTTTTTTTTGACATGAGAAAACAATTCTATTTCTCTTCAAAAGATTAAAGGTTTTACAAAGAAGATACAATGCACAATTCTATACTCCAATTTTAATAATTTACCAATTTTCTGCACACTATAAACAGCTTTTTCTGAGAGAAAAAAAAAATCCTCAAACACAGGTAGAATACAAACAATAGTTGACTGGGAGAAAAAAGAATTCACTTTATCTTGCGATGTTTTTCCATCAAAGAAAGTAATAGGGGGTTCTTCTCAATGTCTTCAAAGGTTCAGGCATTGCAAACACAGATTTGTTCTGCTTATTCCTTCTGTTCTTCCAATACAAATTCAACATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614062" ref_strand="+" ref_description="SGN-E614062 [63844]">
      <seq>tttgtattggaagaacagaaggaataagtagaacaaatctgtgtttgcaatgcctgaacctttgaagacattgagaagaaccccctattactttctttgatggaaaagcattgcaagataaagtgaattcttttttctctcagtcaactgttgtttgttttctacctgtgtttgaggattttcttttttttctcagaaaaagctgtttatagtgtgcagtagtttggtaaattattcaaattggagtacacaattgtgtattgtatcttctttgcaaaaatcttgatcttttgaagagaaatagaattgttttgacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="15236" stop="76690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15536" g_stop="15862" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E614062" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15536" e_stop="15862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTATTGGAAGAACAGAAGGAATAAGCAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAACATCGCAAGATAAAGTGAATTCTTTTTTCTCCCAGTCAACTATTGTTTGTATTCTACCTGTGTTTGAGGATTTT-TTTTTTCTCTCAGAAAAAGCTGTTTATAGTGTGCAGAAAATTGGTAAATTATTAAAATTGGAGTATAGAATTGTGCATTGTATCTTCTTTGTAAAACCTTTAATCTTTTGAAGAGAAATAGAATTGTTTTGACATGTCATTTTCC</genome_strand>
        <mrna_strand>TTTGTATTGGAAGAACAGAAGGAATAAGTAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAGCATTGCAAGATAAAGTGAATTCTTTTTTCTCTCAGTCAACTGTTGTTTGTTTTCTACCTGTGTTTGAGGATTTTCTTTTTTTTCTCAGAAAAAGCTGTTTATAGTGTGCAGTAGTTTGGTAAATTATTCAAATTGGAGTACACAATTGTGTATTGTATCTTCTTTGCAAAAATCTTGATCTTTTGAAGAGAAATAGAATTGTTTTGACAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734261" ref_strand="+" ref_description="SGN-E734261 [LB12AG12]">
      <seq>gttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttctcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttctgttctttattaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="18029" stop="15927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17729" g_stop="17653" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="119" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="204" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="304" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="405" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="16512" g_stop="16216" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="702" r_length="297" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E734261" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17729" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCATCT</genome_strand>
        <mrna_strand>GTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320696" ref_strand="+" ref_description="SGN-E320696 [cTOB-27-D13]">
      <seq>gatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaaagcaatcaacaaacatcaatgccttgtggaattgtttttggttgtagttgtttctcaacaccctgtcatatcattcnagcattactgtaatattgtcattcctanactatatatgggaaatacatttctgttctttattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="17359" stop="15927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17059" g_stop="16964" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="197" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16512" g_stop="16218" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="496" r_length="299" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E320696" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17059" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTG-AAAAAAAAGCAATCAACAAACATCAATGCCTTGT-GAATTGTTTTT-GTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATAT-GGAAATACATTTCTGTTCTTTATTATGTTCTCAT</genome_strand>
        <mrna_strand>GATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGGAATTGTTTTTGGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCNAGCATTACTGTAATATTGTCATTCCTANACTATATATGGGAAATACATTTCTGTTCTTTATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322831" ref_strand="+" ref_description="SGN-E322831 [cTOB-30-D11]">
      <seq>gatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttctcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttctgttctttattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="17359" stop="15927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17059" g_stop="16964" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="197" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16512" g_stop="16218" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="493" r_length="296" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E322831" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17059" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTG-AAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCAT</genome_strand>
        <mrna_strand>GATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309050" ref_strand="+" ref_description="SGN-E309050 [cLEZ-1-G9](-)">
      <seq>ataaaaaaggagatagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttctcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttctgttctttattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="17299" stop="15927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16999" g_stop="16964" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="137" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16512" g_stop="16219" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="431" r_length="294" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E309050" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16999" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCA</genome_strand>
        <mrna_strand>ATAAAAAAGGAGATAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545479" ref_strand="+" ref_description="SGN-E545479 [TUS-68-F15](-)">
      <seq>tgcagaggacagagattgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgccgatgatgatgaagatgatacagaggctttattggcagagcttgaacagataaaaaaggggaaagcaggggggaaattttgaaaagaacgccaagagcaagggggggggcttaaagcaaaggaagcagaattgttgaaaggaaacccttttataaaccagccaacgtttttcagtgttaagagaaggtgggatgatgatgtggttttcaagaatcaggctcggggagaactgaaggtagccaagcgtttcattaatgaccccttccggaatgactttcacaggaagtttttccccaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttttcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttttgttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="17847" stop="15930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17547" g_stop="17501" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="132" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="232" r_length="100" r_score="0.930"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="333" r_length="101" r_score="0.941"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16512" g_stop="16231" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="615" r_length="282" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="617" polyA_stop="667"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E545479" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17547" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTT</genome_strand>
        <mrna_strand>TGCAGAGGACAGAGATTGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGCCGATGATGATGAAGATGATACAGAGGCTTTATTGGCAGAGCTTGAACAGATAAAAAAGGGGAAAGCAGGGGGGAAATTTTGAAAA................................................................................................................................................................................................................................................................GAACGCCAAGAGCAAGGGGGGGGGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTTTTATAAACCAGCCAACGTTTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTTTTCAAGAATCAGGCTCGGGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACCCCTTCCGGAATGACTTTCACAGGAAGTTTTTCCCCAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTTTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTTTGTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239341" ref_strand="+" ref_description="SGN-E239341 [cLEL-9-O8](-)">
      <seq>aagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaacctctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttctcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttctgttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="16994" stop="15930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16694" g_stop="16607" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16512" g_stop="16231" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="371" r_length="282" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="372" polyA_stop="391"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E239341" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16694" e_stop="16607"/>
          <exon e_start="16512" e_stop="16231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACC-CTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTT</genome_strand>
        <mrna_strand>AAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCTCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239001" ref_strand="+" ref_description="SGN-E239001 [cLEL-9-O8](-)">
      <seq>agcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagaaaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccccaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacatcaatgccttgtgaattgtttttgttgtagttgtttctcaacaccctgtcatatcattcaagcattactgtaatattgtcattcctaaactatatatggaaatacatttctgttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="16985" stop="15930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16685" g_stop="16607" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16512" g_stop="16231" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="361" r_length="282" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="362" polyA_stop="381"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E239001" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16685" e_stop="16607"/>
          <exon e_start="16512" e_stop="16231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTT</genome_strand>
        <mrna_strand>AGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAAAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCCCAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E260630" ref_strand="+" ref_description="SGN-E260630 [cLEG-54-G23]">
      <seq>ccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggantgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacagggagtttctcccaaatancatgaatgataataggattttgatgtgaaaaaaaagcatcaacaacatcaatgccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19559" stop="16038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19259" g_stop="19173" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="229" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="333" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="375" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="460" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="560" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="661" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16338" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="834" r_length="173" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E260630" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19259" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGA-TGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATA-CATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTG</genome_strand>
        <mrna_strand>CCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGANTGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGGAGTTTCTCC-CAAATANCATG-AATGATAATAGGATTTTGATGTGAAAAAAAAGC-ATCAAC-AACATCAATGCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E690854" ref_strand="+" ref_description="SGN-E690854 [LH_Ea04J12]">
      <seq>catanaggaacaatccggtgtgaattgggtcaaaccaaactctgaatctcccagctccaccatctcttcgattccgccggcgatttcaatcactccttaagagaattttgaagtatgacaactgcagctagacctacatgggcgccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttacataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacagctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagagattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgacgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgctttattaatgacaccatccggaatgactttcacaggaagtttctccacaaatatatgaaatgataataggatttttatgtgaaaataaagcaatcaacaaacatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19565" stop="16046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19273" g_stop="19173" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19010" i_length="163">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19009" g_stop="18866" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="245" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="349" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="391" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="476" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="576" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="677" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16345" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="845" r_length="168" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E690854" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E690854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19273" e_stop="19173"/>
          <exon e_start="19009" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAA</genome_strand>
        <mrna_strand>CATANAGGAACAATCCGGTGTGAATTGGGTCAAACCAAACTCTGAATCTCCCAGCTCCACCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG...................................................................................................................................................................AGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCGCCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTACATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACAGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGAGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGACGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGCTTTATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATATATGAAATGATAATAGGATTTTTATGTGAAAATAAAGCAATCAACAAACATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731624" ref_strand="+" ref_description="SGN-E731624 [LA27CG07]">
      <seq>agggcacttattatttatccggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaagcaatcaacaaacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19603" stop="16047"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19303" g_stop="19173" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="273" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="377" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="419" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="504" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="604" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="705" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16347" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="870" r_length="165" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E731624" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19303" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGCACTTATTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATC</genome_strand>
        <mrna_strand>AGGGCACTTATTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTG-AAAAAAAGCAATCAACAAACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731706" ref_strand="+" ref_description="SGN-E731706 [LA27DG07]">
      <seq>agggcacttattatttatccggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctccacaaatacatgaaatgataataggattttgatgtgaaaaaaaagcaatcaacaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19603" stop="16048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19303" g_stop="19173" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="273" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="377" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="419" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="504" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="604" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="705" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16348" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="870" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E731706" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731706" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19303" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGCACTTATTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACAT</genome_strand>
        <mrna_strand>AGGGCACTTATTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731781" ref_strand="+" ref_description="SGN-E731781 [LA28AF12]">
      <seq>atttatccggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaggtgggatgatgatgtggtcttcaagaatcaggctcgcggagaactgaaggtagccaagcgtttcattaatgacaccatccgggaatgactttcacaggaagtttctccacaaatacatggaaatgataataagaattttgatgggaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19591" stop="16063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19291" g_stop="19173" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="261" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="365" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="407" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="492" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="592" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="693" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16363" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="846" r_length="153" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E731781" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19291" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCC-GGAATGACTTTCACAGGAAGTTTCTCCACAAATACAT-GAAATGATAAT-AGGATTTTGATGTGAAAAAAAA</genome_strand>
        <mrna_strand>ATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGGAAATGATAATAAGAATTTTGATGGGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545480" ref_strand="+" ref_description="SGN-E545480 [TUS-68-F15]">
      <seq>attgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgtatatgttgttgcagaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaaagaagggggaaatgaatgatgtggtctttcagaatcaggctcgcggagaactgaangtagccaagcgtttcattaatgacaccatccggaatgactttcacaggaagtttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19550" stop="16107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19250" g_stop="19173" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="220" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="324" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17558" i_length="95">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17557" g_stop="17501" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="381" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="466" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="566" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="666" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16407" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="774" r_length="108" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E545480" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19250" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17557" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGG-GATG-ATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTC</genome_strand>
        <mrna_strand>ATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG...............................................................................................TATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAA-AGAAG..............................................................................................GGGGAAATGAATGATGTGGTCTTTCAGAATCAGGCTCGCGGAGAACTGAANGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209608" ref_strand="+" ref_description="SGN-E209608 [cLEC-54-E16]">
      <seq>gatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcaagaggaggagcttaaagcaaaggaagcagaattgttgaaaggaaaccctcttataaaccagccaacgtctttcagtgttaagagaaagtgggatgatgatgtggtcttcaagaatcaggctcgcggagaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19197" stop="16168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18897" g_stop="18866" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="136" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="178" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="263" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="363" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="464" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16512" g_stop="16468" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="509" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E209608" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18897" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACT</genome_strand>
        <mrna_strand>GATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAA..............................................................................................GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478135" ref_strand="+" ref_description="SGN-E478135 [cSTD-3-E18]">
      <seq>gtcgaaccaaaacccgaacctcccagctccgatcatctctccgattccgccggcgatttccatcactcgttaagagattctgtggaggagaattttgaagtatgaccactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagacattgcagctcacactactttaaagcccagaaaggagggacaggacactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcggagacatttttcttcaaaagacaacagctacgaggacagagatcgtagaaagaatggtcaactgcttttagatggtgctaaaagagagattgaagaccgcattgttccacgcagcgctgatactgatgatgatgcagacaccaaaagtgacgatgagagtgaggacgatgacgacgatgatgatgaagatgatacagaggctctactggcagagcttgaacagataaagaaggaaaaagcagaggagaaactccgaaaagaacgacaagagcaagaggaggagcttaaagtaaaggaagcagaattgttgaagggaaaccctcttataaaccagccaacgtctttcagtgtgaagagaaggtgggatgatgaatgtggtcttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19545" stop="16305"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19245" g_stop="19173" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19024" i_length="149">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19023" g_stop="18866" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="232" r_length="158" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="336" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="378" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="463" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="563" r_length="100" r_score="0.950"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16607" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="664" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94">
            <donor d_prob="0.806" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16512" g_stop="16490" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="688" r_length="24" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E478135" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19245" e_stop="19173"/>
          <exon e_start="19023" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16607"/>
          <exon e_start="16512" e_stop="16490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAACCAAAATCCGAATCTCCCAGCTCC-ATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAGGTTAATCCCTTAAGGCATGGCATCTTTTGAGATTTTTCAGCTTTACTTCTATGTAAAACTTACCACATTTGTCTTTGATTCATTTTCTCTTTAGGTGGGATGATG-ATGTGGTCTTCA</genome_strand>
        <mrna_strand>GTCGAACCAAAACCCGAACCTCCCAGCTCCGATCATCTCTCCGATTCCGCCGGCGATTTCCATCACTCGTTAAG.....................................................................................................................................................AGATTCTGTGGAGGAGAATTTTGAAGTATGACCACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGACATTGCAGCTCACACTACTTTAAAGCCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGACACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGGAGACATTTTTCTTCAAAAGACAACAGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAATGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGAGATTGAAGACCGCATTGTTCCACGCAGCGCTGATACTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGACGATGACGACGATGATGATGAAGATGATACAGAGGCTCTACTGGCAGAGCTTGAACAGATAAAGAAGGAAAAAGCAGAGGAGAAACTCCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCAAGAGGAGGAGCTTAAAGTAAAGGAAGCAGAATTGTTGAAGGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTGAAGAGAAG..............................................................................................GTGGGATGATGAATGTGGTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309049" ref_strand="+" ref_description="SGN-E309049 [cLEZ-1-G9]">
      <seq>ttatttatccggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcagacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaagcagaggagaaacttcgaaaagaacgacaagagcacgaggaggagcttaaagcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19593" stop="16373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19293" g_stop="19173" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="263" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="367" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="409" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="494" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16964" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="594" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16707" g_stop="16673" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="629" r_length="35" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E309049" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19293" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16964"/>
          <exon e_start="16707" e_stop="16673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAAGTATGTATTACTAAATGCTTGATAGTTTCTTTACCAATTTGTTATGTGGGTCCTTCAAAATTTCCTGTTTCTTAAACTGCATATCCTGAGGTTTATATTGGTGGTATTCCTTCTCCACACGAATAGCTTCTAGAACTGTGCAAAATTTCCATTCAGAGCTGTAGACAGAAGGGAGTACCAATCATCGTATTCATCTGATGATGTGAATACCAACCATCAACACTGCTATGAACTCAAAGTTGTGTGATTTTGGCAGGAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAA</genome_strand>
        <mrna_strand>TTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA................................................................................................................................................................................................................................................................GAACGACAAGAGCACGAGGAGGAGCTTAAAGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311192" ref_strand="+" ref_description="SGN-E311192 [cLEZ-16-C8]">
      <seq>ttgggtcataccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacgtatatgttgttgcagaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctgatgctgatgatgatgcacacaccaaaagtgacgatgagagtgaggatgatgacgacgatgatgatgaagatgatacagaggctctattggcagagcttgaacagataaaaaaggagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19549" stop="16684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19249" g_stop="19173" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="219" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="323" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17558" i_length="95">
            <donor d_prob="0.498" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17557" g_stop="17501" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="380" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="465" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16984" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="545" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E311192" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19249" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17557" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAG</genome_strand>
        <mrna_strand>TTGGGTCATACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG...............................................................................................TATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCACACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427929" ref_strand="+" ref_description="SGN-E427929 [STM-49-I6]">
      <seq>gtcgaaccaaaacccgaacctcccagctccgatcatctctccgattccgccggcgatttccatcactcgttaagagattctgtggaggagaattttgaagtatgaccactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagacattgcagctcacactactttaaagcccagaaaggagggacaggacactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcggagacatttttcttcaaaagacaacagctacgaggacagagatcgtagaaagaatggtcaactgcttttagatggtgctaaaagagagattgaagaccgcattgttccacgcagcgctgatactgatgatgatgcagacaccaaaagtgacgatgagagtgaggacgatgacgacgatgatgatgaagatgatacagaggctctactggcagagctttgacagataaagaaggaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19545" stop="16684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19245" g_stop="19173" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19024" i_length="149">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19023" g_stop="18866" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="232" r_length="158" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="336" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="378" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="463" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16984" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="543" r_length="80" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E427929" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19245" e_stop="19173"/>
          <exon e_start="19023" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAACCAAAATCCGAATCTCCCAGCTCC-ATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAG</genome_strand>
        <mrna_strand>GTCGAACCAAAACCCGAACCTCCCAGCTCCGATCATCTCTCCGATTCCGCCGGCGATTTCCATCACTCGTTAAG.....................................................................................................................................................AGATTCTGTGGAGGAGAATTTTGAAGTATGACCACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGACATTGCAGCTCACACTACTTTAAAGCCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGACACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGGAGACATTTTTCTTCAAAAGACAACAGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAATGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGAGATTGAAGACCGCATTGTTCCACGCAGCGCTGATACTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGACGATGACGACGATGATGATGAAGATGATACAGAGGCTCTACTGGCAGAGCTTTGACAGATAAAGAAGGAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478190" ref_strand="+" ref_description="SGN-E478190 [cSTD-3-F17]">
      <seq>gtcgaaccaaaacccgaacctcccagctccgatcatctctccgattccgccggcgatttccatcactcgttaagagattctgtggaggagaattttgaagtatgaccactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagacattgcagctcacactactttaaagcccagaaaggagggacaggacactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcggagacatttttcttcaaaagacaacagctacgaggacagagatcgtagaaagaatggtcaactgcttttagatggtgctaaaagagagattgaagaccgcattgttccacgcagcgctgatactgatgatgatgcagacaccaaaagtgacgatgagagtgaggacgatgacgacgatgatgatgaagatgatacagaggctctactggcagagcttgaacagataaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19545" stop="16692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19245" g_stop="19173" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19024" i_length="149">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19023" g_stop="18866" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="232" r_length="158" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="336" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="378" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="463" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17063" g_stop="16993" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="534" r_length="71" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E478190" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19245" e_stop="19173"/>
          <exon e_start="19023" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17330"/>
          <exon e_start="17063" e_stop="16993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAACCAAAATCCGAATCTCCCAGCTCC-ATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAGGTTTGTACATTGTTCCCCATTTGTACAAAGATGCTTTTAGTAAGCTCCTATTTGTGCAAACGTTGGAATACTTGATAGTTTTTCATTGATAAATAAGGGTTGTTGAACAATTGTTTTTTGTTGTACGATCAAATTTTGTTGTAGAATGCATGTCCTTAATATTTCCAGTTCATCGTTGATATGTTTCCACCCTTACTGCAGCTTTGCATTTAGACTGTTTTATTTTGTTACTTCAAAACCTTATAAGTTGTTTACGCTGATTTTAGTGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAA</genome_strand>
        <mrna_strand>GTCGAACCAAAACCCGAACCTCCCAGCTCCGATCATCTCTCCGATTCCGCCGGCGATTTCCATCACTCGTTAAG.....................................................................................................................................................AGATTCTGTGGAGGAGAATTTTGAAGTATGACCACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGACATTGCAGCTCACACTACTTTAAAGCCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGACACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGGAGACATTTTTCTTCAAAAGACAACAGCTACG..............................................................................................................AGGACAGAGATCGTAGAAAGAATGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGAGATTGAAGACCGCATTGTTCCACGCAGCGCTGATACTGATGATGATGCAGACACCAAAAGTGACGATGAGAG..........................................................................................................................................................................................................................................................................TGAGGACGATGACGACGATGATGATGAAGATGATACAGAGGCTCTACTGGCAGAGCTTGAACAGATAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E283875" ref_strand="+" ref_description="SGN-E283875 [cLER-13-M19]">
      <seq>ggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacatttttcttcaaaagacaacggctacnaggacagagatcgtagaaagagtggtcaactgcttttagatggtgctaaaagagtgattgaagaccgcattgttccacgcagcgctnatgctgatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19583" stop="17055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19283" g_stop="19173" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="253" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17756" g_stop="17653" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="357" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110">
            <donor d_prob="0.498" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17542" g_stop="17501" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="399" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17414" g_stop="17355" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="459" r_length="60" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E283875" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19283" e_stop="19173"/>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17653"/>
          <exon e_start="17542" e_stop="17501"/>
          <exon e_start="17414" e_stop="17355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACGGTATGTGATATATGGATAGACTCTCTCCCTCCTGCACGCATGTGTGGACTCATATCAAATTCCTATCTGATTTTGTTCAACTCATAAACTTATAGTATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATGGTGAGTGTTGTTTGTTCATTAGACTAGTCTAGAATTTCAACAAGACATTCATCATGTTTCCATTATTATATGATATTCTGCTGCAGGTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATG</genome_strand>
        <mrna_strand>GGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACN..............................................................................................................AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG......................................................................................GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTNATGCTGATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277122" ref_strand="-" ref_description="SGN-E277122 [cLEL-3-O21](-)">
      <seq>aattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctagaaaggagggacaggatactcaggatgagttgcataggagaaatctccgggaagagttggaggaccgtgagcgaagacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19307" stop="17378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19007" g_stop="18866" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17756" g_stop="17678" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="221" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E277122" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>221</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277122" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19007" e_stop="18866"/>
          <exon e_start="17756" e_stop="17678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATCCCTATTCGGTTATTGTGTCTGTAGATGTATGATCTTATTTTGCATTCAGGTGAAGTGAAGTGGCTTATGCTCATTTTTTTTAAGAAAGGTAGATATAAGTGAAATGGATTATGTTAAAGCGGAACTAAGAGCTATTGAAAGGTTATGTTGAGTATAATTGAAGCTTATAATGATAATATGGTCAGTAGTTTCACTTGTTATATTTATTGTCTCCTCCTGTAGTTGTAGTCCAACAGACATGGTTTCCCCATAGAATTACCTGGGAAGTTCTGTTAAGTCAATCTTCTTAAGAGAAAGGCGTTGTACATTTATGATATGATTAAAGGTATGCAATTTTATTTTCCACTCGGTATGGGTAAAATGTTTAGATTGTTCTTAATTTGAGAAGTTGTAAATAAATGCGTCAATAGTATGTCAAGGATCAATTTATCAAAACGATAGCATGGCAAGGAACTGTGTTTATCACGAATGCTATAATTAGAAAATGGTGTATTACAACATATCTTATGTCCATTTTACCTAGTTATTGCAGTATATGGTATGAATGTAGGTTATTGTAGATTCTAAGTGAGTTTAGTTCGTGTCACTTATGAGTAGAAACAGTTCTGACCCAAGTTGATTTGAGGGATGAATTGATTTATTTGTGTGAGAAATAGGGTAGATGATGTATGCTGTAATTTGTCAAACTGATTGATGAACTTGCATTACTTGTATTTCTGAATCCTGGCATATAGAAATTTAGGCAGTTCATTGTTGAACTCAATGGGTTTGTCATTAAGGTAACATAAGTTGGCTGTCCTCCTAATTGTCGTGAATCTGAATTGAACTCGATATTATTATCATGCATATTACATACAAGGCGTTTCTCTATTTCCATTAATGGTTCTGCCTGAGTTGCTTAAATTGGTGCTCTTCTAAATTCTTATCATGATTTCATTATCTCTATTTCCATTGTTGTGTATGATTCAGAAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACAT</genome_strand>
        <mrna_strand>AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264507" ref_strand="+" ref_description="SGN-E264507 [cLEG-67-M7]">
      <seq>ttatttatccggcggtgcatcgtccccaaacaatccggtgtgaattgggtcaaaccaaaatccgaatctcccagctccatcatctcttcgattccgccggcgatttcaatcactccttaagaattttgaagtatgacaactgcagctagacctacatgggcaccagctaaaggagggaatgaacaaggtggaactagaatttttggtccatctcagaagtattcttcaagagatattgcagctcacactactttaaagcctaggcaagtaatttgaaataatgtttttttttattactacttccgtttcaatctgtttgtgtggtttttgacttaccacggagtgtactgagtctaaagctggggatttttgtggctcaacttacctgggtccaacctgcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="19593" stop="18426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19293" g_stop="19173" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19007" g_stop="18726" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="403" r_length="282" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E264507" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19293" e_stop="19173"/>
          <exon e_start="19007" e_stop="18726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAGGTAATTGAAAATCCGATTATCGAATTTTGATAGTAGGGTTAGAAATGAATTGTTGTTTTCTAGGGTTCTTAGATTATTTTAACCTAATTTGATGTTTGTTGATGTTTACATTCATGAAAAGAAAATTTGGATTTCTGAGTAAAGAAGTTACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCT-GGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATC</genome_strand>
        <mrna_strand>TTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG.....................................................................................................................................................................AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATG-TTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGGATTTTTGTGGCTCAACTTACCTGGGTCCAACCTGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379953" ref_strand="+" ref_description="SGN-E379953 [TUS-3-N5]">
      <seq>aaaaaccaaaaagaaataaataaggttaaggagagcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttttcagctatatgatctcaagcaacaaggttttattgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24694" stop="29217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24994" g_stop="25106" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="195" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="329" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="412" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="472" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="581" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28917" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="625" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E379953" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24994" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAG</genome_strand>
        <mrna_strand>AAAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205685" ref_strand="+" ref_description="SGN-E205685 [cLEC-21-M3]">
      <seq>aaaaaccaaaaagaaataaataaggttaaggagagcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24694" stop="29048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24994" g_stop="25106" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="195" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="329" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="412" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="472" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28748" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="541" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E205685" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205685" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24994" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCT</genome_strand>
        <mrna_strand>AAAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396084" ref_strand="+" ref_description="SGN-E396084 [TUS-19-C11]">
      <seq>aaaaccaaaaagaaatatttaaggttaaggagagcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24695" stop="26630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24995" g_stop="25106" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26257" i_length="1151">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26258" g_stop="26330" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="185" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E396084" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>185</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24995" e_stop="25106"/>
          <exon e_start="26258" e_stop="26330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGAT</genome_strand>
        <mrna_strand>AAAACCAAAAAGAAATATTTAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231729" ref_strand="+" ref_description="SGN-E231729 [cLED-4-P19]">
      <seq>aaaccaaaaagaaataaataaggttaaggagagcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcaactctctgtttccatccaaacgcacctatcgatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24696" stop="29078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24996" g_stop="25106" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26257" i_length="1151">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="245" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="328" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="388" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28680" g_stop="28778" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="487" r_length="99" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E231729" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24996" e_stop="25106"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGC-ACTCTCTGTTTTCCATCCAAACGCACCTATCGATGAC</genome_strand>
        <mrna_strand>AAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCAACTCTCTG-TTTCCATCCAAACGCACCTATCGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236223" ref_strand="+" ref_description="SGN-E236223 [cLED-20-H21]">
      <seq>aaaaagaaataaataaggttaatgagagcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24701" stop="27631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25001" g_stop="25106" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26257" i_length="1151">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="240" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="323" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27300" g_stop="27331" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="355" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E236223" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25001" e_stop="25106"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAA</genome_strand>
        <mrna_strand>AAAAAGAAATAAATAAGGTTAATGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E360240" ref_strand="+" ref_description="SGN-E360240 [cLPP-14-B6]">
      <seq>ttaaggagagcttcctccttctcctgcctcaaaaattcatctctgattttgcaatcatctcaaactaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagaggatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgacacaaaacacaacggaatcttgggatttgaggaatttgctcgtgcactctctgttttccatccaaatgcacctatcgatgacaagattgaattttcttttcagctatatgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24719" stop="29102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25019" g_stop="25106" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="170" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="304" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="387" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="447" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="556" r_length="109" r_score="0.972"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.877" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28895" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="578" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E360240" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E360240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25019" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCT</genome_strand>
        <mrna_strand>TTAAGGAGAGCTTCCTCCTTCTCCTGCCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAACTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGGATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGACACAAAACACAACGGAATCTTGGGATTTGAGGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAATGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329723" ref_strand="+" ref_description="SGN-E329723 [cTOD-3-N8]">
      <seq>gcttcctccttctcctacctcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24728" stop="29096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25028" g_stop="25106" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="161" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="295" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="378" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="438" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="547" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28880" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="554" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E329723" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25028" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTT</genome_strand>
        <mrna_strand>GCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257048" ref_strand="+" ref_description="SGN-E257048 [cLEG-44-M22]">
      <seq>gatcccccgggctgcaggcaaaaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24748" stop="29082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25028" g_stop="25106" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.861"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="159" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="293" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="376" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="436" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28782" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="539" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E257048" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25028" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGA</genome_strand>
        <mrna_strand>GATCCCCCGGGCTGC-A-GGCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E360589" ref_strand="+" ref_description="SGN-E360589 [cLPP-7-I19]">
      <seq>cttctcctgcctcaaaaattcatctctgattttgcaatcatctcaaactaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagaggatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacattagcgtcagcgagattgaagctctntatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgacacaaaacacaacggaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24736" stop="29015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25036" g_stop="25106" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="153" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26387" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="283" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="27045" i_length="658">
            <donor d_prob="0.708" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="366" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="426" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28715" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="462" r_length="36" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E360589" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E360589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25036" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26387"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATC</genome_strand>
        <mrna_strand>CTTCTCCTGCCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAACTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGGATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTNTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGACACAAAACACAACGGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703980" ref_strand="+" ref_description="SGN-E703980 [FA23AB01]">
      <seq>aaattcatctctgattttgcaatcatctcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttttcagctatatgatctcaagcaacaaggttttattgagagacaagaggtaaagcaaatggtagtggctactcttgcggagtctggtatgaacctctctgatgatgtgatcgagagcattattgacaagacttttgaagaagccgataccaagcatgatggaaagatcgataaggaggaatggagaaacttagtgttgcgacatccttcacttttgaagaacatgaccctccaatatctcaaggacattactacaacgtttccgagctttgtctttcattcaagaagtgaggacacctaatttgggatttgancagagaattatgattccatgaacatagtataacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24751" stop="30526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25051" g_stop="25106" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="138" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="272" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="355" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="415" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="524" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28926" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="577" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="29600" g_stop="29680" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="658" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="29681" i_stop="29925" i_length="245">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="29926" g_stop="30038" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="771" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="30039" i_stop="30119" i_length="81">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="30120" g_stop="30226" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="772" r_stop="878" r_length="107" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E703980" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25051" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28926"/>
          <exon e_start="29600" e_stop="29680"/>
          <exon e_start="29926" e_stop="30038"/>
          <exon e_start="30120" e_stop="30226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAGGTAATTATAAATCTCAATAAGTGAAAGTGATTAAATGTCCCCAATTTTGAAAGTCTTTGTTTAAGTAGTTGACTGGACTCTTGAGGCAAGGCAAAAGACATTAAACGGTCTGTATCCAGGTGGCAAAGCTCCACCGAGGGGTTTGCGTTTAGGGCTTTTAGGCTGATGAATGTACTTTTTTACAGGCATCTTTCTAGGTCTTGCATTGGGCTAGTCAAATTTCTGGTCCTTTTGCTCCATATTTCAGATTAGTATGGAATAATTTGGTTACCTTAAGCCCATTTAATGTATCTCTTTAATTATATGATAAGCAAATTAAGTGTGACCAAAGTCCAATTTTGGTCAGTAGTTTCCAGTCATCTTTCTGCTCCCGTTCTTCTTTTTTTCACCACTCCACATTCAATCTGATTTACTATTCCTGTTCTTTTCTAAAATTTCCGACAACTATTCCTTTTATAGTTTACTCATGAAGCATAACATTTTAGCCTTATCAAGTACTGGTCATCATAATTTGTAGAATGTTTCATAGTCTCTTCTCCTACTTTATAGTATCCCAGTTTTAGATGCTCTAATCGTGAAACCTCCCTGATGTCTCTTTACGAGCTTTATTAACCAACATTACTTGTGTGTGTATGCTTTTTGATAAGATAAAAGACGTGCCTTCTGAGTGCAGGTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAGGTGCTTCATCAACCTAAAAAGTACTTGTTTCTGCATGTTGTATAAGTCATACATAACAATAGTGAATTCACCTCATGGTCTATGTTGCCAAGTTTTATCTTGGACCAAAGGGAAAGTCTACGCTTTCAATTCCCCGAGGGTACCATAATCTTATCGCGTTTTTTCTTATTTTTACTGATCTCATTGTCTTATGAAAGTGAACCTTTTGATGATTAACTAATAATAATATGTTGTTGTTTTATCAGACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAAGTAAGTGTGAGACATGAAATGTTGAGGTATTTCATTGTTTTTTCGTTGTATTAATTCATATCTTCGTCCTCTAAACAACAGGGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATT</genome_strand>
        <mrna_strand>AAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAG.....................................................................................................................................................................................................................................................ACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAA.................................................................................GGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAAGTGAGGACACCTAATTTGGGATTTGANCAGAGAATTATGATTCCATGAACATAGTATAACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E360748" ref_strand="+" ref_description="SGN-E360748 [cLPP-7-I21]">
      <seq>tgcaatcatctcaaactaaatctccatttattcataaacatatgtagctgcatatagataggtgtcagaaactttcagtattttggattcataaatagacataacagaggatggtcgaaagatatggagtgaattgaatctgagacggtaccatgctgcaatgcttaggttcttaccttgcgaggagttgcgatcttgactttgagcaatccgggggcctcgacgatcctgagatacttgcacgagagacattagcgtcagcgagattgaagctctctatgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24768" stop="27378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25068" g_stop="25106" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.952" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="121" r_length="82" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26387" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="251" r_length="130" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="27045" i_length="658">
            <donor d_prob="0.708" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27078" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="284" r_length="33" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E360748" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E360748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25068" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26387"/>
          <exon e_start="27046" e_stop="27078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATCATCTCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGC</genome_strand>
        <mrna_strand>TGCAATCATCTCAAACTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTAGCTGCATATAGATAGGTGTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGGATGGTCGAAAG......................................................................................................ATATGGAGTGAATTGAATCTGAGACGGTACCATGCTGCAATGCTTAGGTTCTTACCTTGCGAGGAGTTGCGATCTTGACTTTGAGCAATCCGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTCTATGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270108" ref_strand="+" ref_description="SGN-E270108 [cLEM-7-L11]">
      <seq>tcaaattaaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagagaatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttttcagctatatgttctcaagcaacaaggttttattgagagacaagaggtaaagcaaatggtagtggctactcttgcggagtctggtatgaacctctctgatgatgtgatcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24778" stop="29965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25078" g_stop="25106" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="111" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="245" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="328" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="388" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="497" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28926" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="550" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="29600" g_stop="29665" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="616" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E270108" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25078" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28926"/>
          <exon e_start="29600" e_stop="29665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAGGTAATTATAAATCTCAATAAGTGAAAGTGATTAAATGTCCCCAATTTTGAAAGTCTTTGTTTAAGTAGTTGACTGGACTCTTGAGGCAAGGCAAAAGACATTAAACGGTCTGTATCCAGGTGGCAAAGCTCCACCGAGGGGTTTGCGTTTAGGGCTTTTAGGCTGATGAATGTACTTTTTTACAGGCATCTTTCTAGGTCTTGCATTGGGCTAGTCAAATTTCTGGTCCTTTTGCTCCATATTTCAGATTAGTATGGAATAATTTGGTTACCTTAAGCCCATTTAATGTATCTCTTTAATTATATGATAAGCAAATTAAGTGTGACCAAAGTCCAATTTTGGTCAGTAGTTTCCAGTCATCTTTCTGCTCCCGTTCTTCTTTTTTTCACCACTCCACATTCAATCTGATTTACTATTCCTGTTCTTTTCTAAAATTTCCGACAACTATTCCTTTTATAGTTTACTCATGAAGCATAACATTTTAGCCTTATCAAGTACTGGTCATCATAATTTGTAGAATGTTTCATAGTCTCTTCTCCTACTTTATAGTATCCCAGTTTTAGATGCTCTAATCGTGAAACCTCCCTGATGTCTCTTTACGAGCTTTATTAACCAACATTACTTGTGTGTGTATGCTTTTTGATAAGATAAAAGACGTGCCTTCTGAGTGCAGGTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAG</genome_strand>
        <mrna_strand>TCAAATTAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGTTCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366284" ref_strand="+" ref_description="SGN-E366284 [cLPT-1-J12]">
      <seq>taaatctccatttattcataaacatatatagctgcatatagataggtttcagaaactttcagtattttggattcataaatagacataacagaggatggtcgaaagatatggagtgttttgaatctgagacgttaccatgctgcagtgcttaggttcttacctttcgaggtgttgcgatcttgattttaagcaatcggggggcctcgacgatcctgagatacttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaaaataagcagtgcactgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgacacaaaacacaacggaatcttgggatttgaggaatttgctcgtgcactctctgttttccatccaaatgcacctatcgatgacaagattgaattttcttttcagctatatgatctcaagcaacaaggttttattgagagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="24784" stop="29221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25084" g_stop="25106" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26074" g_stop="26155" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="105" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102">
            <donor d_prob="0.947" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26391" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="239" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="322" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="382" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="491" r_length="109" r_score="0.972"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28874" g_stop="28921" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="539" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E366284" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25084" e_stop="25106"/>
          <exon e_start="26074" e_stop="26155"/>
          <exon e_start="26258" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATCTCCATTTATTCATAAACGTAAGTTTTTTTTGTTTACCCTTTTTCATTGTGATTCTCATGTTGTTGTTTTCTTGTAATTATTAGATCTGTTTGTTAATCAAATCGAACTGTTTGATTGAATAGTTGAAATTCTTGATCTGATTGAATTTTGATGTGATATACAAGTTTGTTTTTGTGTAATTTGATGTGGAGTTTTTATAATTTTGTTGTTTTTATAAGTAAAGTTTCGAAATGTAAGCTAAATTTGAGTTTAGATATAAAGATTCATTTTTTAAAGAATTCAATTCCGATTGCCCTGCAGAAAGGAATGTGATTTTGGCGTGAAAAGTTTAGCCAACTTGTTTTTGCAAGTTCTCACTTATGAATTAATCTTCGAGGTGACTGTTCGTTTCATTTTTATCAATAAAAGAATGATCTTTTGGTGTTGTATTGTCTTTGAGGTTTAGTGCTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTATTAATAAAAGAATGATCTTATGGTGTTCTGTTGTCTTTGAGGTTTACTGTTGTTGTTGAGTTTGTTTCGAGGTGACTGTTCGTTTCATTTTTAGTAATAAAAGAATGATCTTTTGGTGTTGTGTTATCTTTGAGGTTTAGTATTATTGTTGAGTTTGTTACATTGATATTGAACCTGAAATCTATGAATTATAAGTCAATTTGTGGAATGGGGGACTGGGGTTATAGTATAATTAGTTGTAGAAGAAGAAAAAGTTGCAACTTTTTGATTTTTGTTCGGATGATGCAATCGGTGAGGTTGAAGAGATACGTTAAGTTATGGTGATAAATTGGCAGGATTTAAACTGCATGGCAAGACGATAATCAATAATGAGATTTACGTTGAAAGATTTGACCATGTTGACTGAATTAAACGGCGTGTTTTAGTGCTTCTTTTATTAGTTTCAGTAGATATTTATGGAACTAAATTGTGTGTTGACATGTTGATATGGCAGATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAGGTTAGTTTTGTTCTTTTCATGTCCGAGAGACATTTCTGTGGTACAAATAATCCAATTAAATTTGTTTTTTTGACTTTGTCTTCTGCCATTTTTGTTGAACAGATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGAC</genome_strand>
        <mrna_strand>TAAATCTCCATTTATTCATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGGATGGTCGAAAG......................................................................................................ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAAATAAGCAGTGCACTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGACACAAAACACAACGGAATCTTGGGATTTGAGGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAATGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379676" ref_strand="+" ref_description="SGN-E379676 [TUS-3-N5](-)">
      <seq>ttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttttcagctatatgatctcaagcaacaaggttttattgagagacaagaggtaaagcaaatggtagtggctactcttgcggagtctggtatgaacctctctgatgatgtgatcgagagcattattgacaagacttttgaagaagccgataccaagcatgatggaaagatcgataaggaggaatggagaaacttagtgttgcgacatccttcacttttgaagaacatgaccctccaatatctcaaggacattactacaacgtttccgagctttgtctttcattcaagagttgaggacacctaatttgggatttgacaagagaattatgattccatgaacatagtataacattctgtttgctctctacatggtttcttattattcttttttgaatagttgttttgtgatttatttctatgaattgattgatgtggagtttctattgactgattaggaacaaacaaaaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="26074" stop="30643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26374" g_stop="26391" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="101" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="161" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="270" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28874" g_stop="28926" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="323" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29600" g_stop="29680" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="404" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29681" i_stop="29925" i_length="245">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29926" g_stop="30038" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="517" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="30039" i_stop="30119" i_length="81">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="30120" g_stop="30343" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="741" r_length="224" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E379676" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26374" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28926"/>
          <exon e_start="29600" e_stop="29680"/>
          <exon e_start="29926" e_stop="30038"/>
          <exon e_start="30120" e_stop="30343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAGGTAATTATAAATCTCAATAAGTGAAAGTGATTAAATGTCCCCAATTTTGAAAGTCTTTGTTTAAGTAGTTGACTGGACTCTTGAGGCAAGGCAAAAGACATTAAACGGTCTGTATCCAGGTGGCAAAGCTCCACCGAGGGGTTTGCGTTTAGGGCTTTTAGGCTGATGAATGTACTTTTTTACAGGCATCTTTCTAGGTCTTGCATTGGGCTAGTCAAATTTCTGGTCCTTTTGCTCCATATTTCAGATTAGTATGGAATAATTTGGTTACCTTAAGCCCATTTAATGTATCTCTTTAATTATATGATAAGCAAATTAAGTGTGACCAAAGTCCAATTTTGGTCAGTAGTTTCCAGTCATCTTTCTGCTCCCGTTCTTCTTTTTTTCACCACTCCACATTCAATCTGATTTACTATTCCTGTTCTTTTCTAAAATTTCCGACAACTATTCCTTTTATAGTTTACTCATGAAGCATAACATTTTAGCCTTATCAAGTACTGGTCATCATAATTTGTAGAATGTTTCATAGTCTCTTCTCCTACTTTATAGTATCCCAGTTTTAGATGCTCTAATCGTGAAACCTCCCTGATGTCTCTTTACGAGCTTTATTAACCAACATTACTTGTGTGTGTATGCTTTTTGATAAGATAAAAGACGTGCCTTCTGAGTGCAGGTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAGGTGCTTCATCAACCTAAAAAGTACTTGTTTCTGCATGTTGTATAAGTCATACATAACAATAGTGAATTCACCTCATGGTCTATGTTGCCAAGTTTTATCTTGGACCAAAGGGAAAGTCTACGCTTTCAATTCCCCGAGGGTACCATAATCTTATCGCGTTTTTTCTTATTTTTACTGATCTCATTGTCTTATGAAAGTGAACCTTTTGATGATTAACTAATAATAATATGTTGTTGTTTTATCAGACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAAGTAAGTGTGAGACATGAAATGTTGAGGTATTTCATTGTTTTTTCGTTGTATTAATTCATATCTTCGTCCTCTAAACAACAGGGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTCTTATTATTCTTTTTTGAATAGTTGTTTTGTGATTTATTTCTATGAATTGATTGATGTGGAGTTTCTATTGACTGATTAGAACCAAACAAAACCC</genome_strand>
        <mrna_strand>TTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAG.....................................................................................................................................................................................................................................................ACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAA.................................................................................GGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTCTTATTATTCTTTTTTGAATAGTTGTTTTGTGATTTATTTCTATGAATTGATTGATGTGGAGTTTCTATTGACTGATTAGGAACAAACAAAACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350737" ref_strand="+" ref_description="SGN-E350737 [cTOS-7-F9]">
      <seq>ttgcacgagagacagtttttagcgtcagcgagattgaagctctttatgagctctttaagaagataagcagtgcagtgattgatgatggtttaatcaacaaggaagagtttcaattggcacttttcaagacaaataaaaaggaaagcttgtttgctgaccgggtgtttgacttgtttgatacaaaacacaacggaatcttgggatttgaagaatttgctcgtgcactctctgttttccatccaaacgcacctatcgatgacaagattgaattttcttttcagctatatgatctcaagcaacaaggttttattgagagacaagaggtaaagcaaatggtagtggctactcttgcggagtctggtatgaacctctctgatgatgtgatcgagagcattattgacaagacttttgaagaagccgataccaagcatgatggaaagatcgataaggaggaatggagaaacttagtgttgcgacatccttcacttttgaagaacatgaccctccaatatctcaaggacattactacaacgtttccgagctttgtctttcattcaagagttgaggacacctaatttgggatttgacaagagaattatgattccatgaacatagtataacattctgtttgctctctacatggttttctattattcttttttgaaatagtgttttgtgaatttattctatgaattgattgatgtggagtttctattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="26074" stop="30621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26374" g_stop="26391" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27046" g_stop="27128" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="101" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27300" g_stop="27359" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="161" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28680" g_stop="28788" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="270" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28874" g_stop="28926" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="323" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29600" g_stop="29680" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="404" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29681" i_stop="29925" i_length="245">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29926" g_stop="30038" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="517" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="30039" i_stop="30119" i_length="81">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="30120" g_stop="30321" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="719" r_length="202" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E350737" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26374" e_stop="26391"/>
          <exon e_start="27046" e_stop="27128"/>
          <exon e_start="27300" e_stop="27359"/>
          <exon e_start="28680" e_stop="28788"/>
          <exon e_start="28874" e_stop="28926"/>
          <exon e_start="29600" e_stop="29680"/>
          <exon e_start="29926" e_stop="30038"/>
          <exon e_start="30120" e_stop="30321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCACGAGAGACAGTTTGTATGCTACTTGGACATTTTGTGATTTTTTCCTAGAAACGTGAAATGATTATGGAAAATAACAAAAGCAAAGTCAAATGGTTCTGAGCTTTTGCCTTTTCTTAGTGGTTCTATTTCCATGATTTTTACCATCATTTTAAAGCTTATTACGGTTCTGTGAAAATGGATAGCATATGCTCCTTTGAGACGTTCTTCCCATATCGGGATGTATCAAAATGTTTGATACCATTCCCTTCCAAAGGAAATTCCTCACAGAACTTACGGTCATTAAGTTGTTTAGATTGTAATACATTGATATTCTAAAATTTGAGACTATGTATCTTTAGAAAAACCGTCTCAATACTAATTTGATCTATAATCAGAATTTGCTATGTTTTTATTGTCGTTAAGCATTTGAAACTACTTTAACCCATCCTCACAGAATTTACGGTCATTAAGCTGTTTAGATTGTAATACATTGATATTCTAACATTTGAGACTATGTATCTTTCAAAAACTATCTGAATACTAATTTGATCTATAATCAGAATTTCTATGTTGTTATTGTCGGAAAGCATTTGAAACTACTATAACCCATAGGTTTTTAGTGTCACGTGGTTTTTGCACTAGTTGAAGTACTATAGCTGAACCTACATAAACTTCTTTCTTGTTGCAGTTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAGGTTTGTGTCACTTGGTTTTCTAAGAGCAATCTAGTATACTAGCATCAGTGCTCTGGCAATCCACTGTCATTGAAAAAGAACTATCTACATGGTCTTTTCCTGGCATGGATGCTTAATATGTATTTATCTTCCGCTGTTCTTTTGGATTTGATTTTGTACCTTATCTTGCAGGAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGGGTACGATCTCCTTAAATGCTATTAGATTTTTAAATGTAATCCCAATTTCATTGAATTTAATAAGGGTCCGTTTCTCGCCAAAAATTAGATATATTGTCTGCATCTTATTATTGCTATACAGCTCAAGCTGTTCTCGTCTAACGGATCAGCTAAGTTGCTTATCCTCTTTAAGTAAGGGAATATGATGGAGGAAGTACAGCCATGCTTATTGTACTCCCTTCACATGCAGCGCATAGAATAAATTAGATTTTAATGGCATTCGTCAATGAAGTTTTTGGTCTGGTTGTCAAAGTGCACGCAAAATTTCCATTACTGTCGAATATGATGAGATTGAGAAATGTGATTTGGTAGCACCCAACAAGATTAACTTTAAATATTATTTAGAAGGGAACTGACATGGTTTTACAAAAGTATTCAATTTTATAGTATAATAATTGAAGGTTTGCGAAGGAAGCAGGATGGAAACAAGGTTTAAGAATTTTAAATTCTTCATGGGAATGAATATATCTAGGTTATCATTTTCAGTTTTCTTATTAAAATTCTATTTTTATCTTATATGCTTTAATATTGGATATCCAATGGTAGTTTTAGTCTTCAAGGTGTCCAAAAAGTATACAATGTATATAGCTCAAATGCTGTTTTAATTAAATATATTCTTTTGATTTGGACACCCTTAATAGACCCGAGAGGCACGGTCTAGCGGTAAAGCCTGCTCGCTTGGAGTTCCGAGTTGCGGGATCAAATCCCACTTTGTACTTTTCATCTACGCATTACCTATTTTAAACGAAAAAAAGAAAGTTGAGTCTACCTATATTGATGCAATAAGGGAACATTTTTAACTATTCTTTTCAAAATCTAAAAGAATTTCTTAAAAAATAACTTTCAGAAATTATGTAAAAATAAATAATTAATTTTTACAATATGTTTTACTAAAAGTATTACTAAAGAAATCTTCAAGTATAAAAGTATCAATCATGCGGATGAATATGTTTATATATTAATATGGTCCAATTGTGATTTCATGAACATCTTTATATTAATATGGCGAATGTGATTTCAAATATTCATGAATGTCTTTAGGACGTGTGGATTTTGAATTTTGAGTAAATTTTGTAGGTTATGCTTGTTTATGTGTTGCTATTGCATTTATTTTATTCTTATTTTTTCTCTCCCTACAAAATGTGCTTAGCTTCTAGTTTATCGCCTAAATTCCCGGAACCTTGTCATTTTAAACATTTCTATTATTGGTCTGGAAGGTTGAGAAGACACACCGGATGGAATTATCTTTATTTCCCCCACTCTGACCTATCTAATATGCAGGTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAATGTATGTTTTGTGTTTGCATTTAATGAGTCATGACTATTAACTTTAGTTGGTCTTAACTGCTTCTAATGGGTTACTACTATTGCAGTTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAGGTAATTATAAATCTCAATAAGTGAAAGTGATTAAATGTCCCCAATTTTGAAAGTCTTTGTTTAAGTAGTTGACTGGACTCTTGAGGCAAGGCAAAAGACATTAAACGGTCTGTATCCAGGTGGCAAAGCTCCACCGAGGGGTTTGCGTTTAGGGCTTTTAGGCTGATGAATGTACTTTTTTACAGGCATCTTTCTAGGTCTTGCATTGGGCTAGTCAAATTTCTGGTCCTTTTGCTCCATATTTCAGATTAGTATGGAATAATTTGGTTACCTTAAGCCCATTTAATGTATCTCTTTAATTATATGATAAGCAAATTAAGTGTGACCAAAGTCCAATTTTGGTCAGTAGTTTCCAGTCATCTTTCTGCTCCCGTTCTTCTTTTTTTCACCACTCCACATTCAATCTGATTTACTATTCCTGTTCTTTTCTAAAATTTCCGACAACTATTCCTTTTATAGTTTACTCATGAAGCATAACATTTTAGCCTTATCAAGTACTGGTCATCATAATTTGTAGAATGTTTCATAGTCTCTTCTCCTACTTTATAGTATCCCAGTTTTAGATGCTCTAATCGTGAAACCTCCCTGATGTCTCTTTACGAGCTTTATTAACCAACATTACTTGTGTGTGTATGCTTTTTGATAAGATAAAAGACGTGCCTTCTGAGTGCAGGTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAGGTGCTTCATCAACCTAAAAAGTACTTGTTTCTGCATGTTGTATAAGTCATACATAACAATAGTGAATTCACCTCATGGTCTATGTTGCCAAGTTTTATCTTGGACCAAAGGGAAAGTCTACGCTTTCAATTCCCCGAGGGTACCATAATCTTATCGCGTTTTTTCTTATTTTTACTGATCTCATTGTCTTATGAAAGTGAACCTTTTGATGATTAACTAATAATAATATGTTGTTGTTTTATCAGACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAAGTAAGTGTGAGACATGAAATGTTGAGGTATTTCATTGTTTTTTCGTTGTATTAATTCATATCTTCGTCCTCTAAACAACAGGGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTCTTATTATTCTTTTTTGAATAGTTGTTTTGTGATTTATTTCTATGAATTGATTGATGTGGAGTTTCTATTGAC</genome_strand>
        <mrna_strand>TTGCACGAGAGACAGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG...........................................................................................................................................................................GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT.....................................................................................TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAG.....................................................................................................................................................................................................................................................ACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAA.................................................................................GGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTTCTATTATTCTTTTTTGAAATAGTGTTTTGTGAATTTATTCTATGAATTGATTGATGTGGAGTTTCTATTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E615269" ref_strand="+" ref_description="SGN-E615269 [65066]">
      <seq>ctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaacttgtgttttctgtgaaatattttacttgctcccctactaatcctggaccaaataaaaaaaaaaaaaaaaaactccgagactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33628" stop="32551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33328" g_stop="32832" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="497" r_length="497" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="498" polyA_stop="515"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E615269" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E615269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33328" e_stop="32832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTT-GATA-TAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCC-CCTAATTCTGGATCATATA</genome_strand>
        <mrna_strand>CTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTTAAATATTATTTCCTTTTCTTGCCCAACTTGTGTTTTCTGTGAAATATTTTAC-TTGCTCCCCTACTAATCCTGGACCAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715200" ref_strand="+" ref_description="SGN-E715200 [FB13CE06]">
      <seq>attgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccagctctttctttctgtgaaatattttactttgctcccccctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33875" stop="32546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33575" g_stop="32847" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="729" r_length="729" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="730" polyA_stop="739"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E715200" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33575" e_stop="32847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTA</genome_strand>
        <mrna_strand>ATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543326" ref_strand="+" ref_description="SGN-E543326 [TUS-65-B9]">
      <seq>gtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaannnnnaggnnnnnnnaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33903" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33603" g_stop="33431" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33430" i_stop="33359" i_length="72">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33358" g_stop="32868" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="664" r_length="491" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E543326" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33603" e_stop="33431"/>
          <exon e_start="33358" e_stop="32868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAAT</genome_strand>
        <mrna_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG........................................................................ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAANNNNNAGGNNNNNNNAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299667" ref_strand="+" ref_description="SGN-E299667 [cLEW-1-K17](-)">
      <seq>tacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttccttttttactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccagctctttctttctgtgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33685" stop="32567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33385" g_stop="32875" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E299667" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33385" e_stop="32875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCT</genome_strand>
        <mrna_strand>TACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTTTTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611433" ref_strand="+" ref_description="SGN-E611433 [61184]">
      <seq>ttttttntgggcaagaaaaggaaataatattaaccacgaaagtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcggtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaatttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32588" stop="33942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32881" g_stop="33642" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="765" r_length="765" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E611433" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E611433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32881" e_stop="33642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGCTGGGCAAGAAAAT-AAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAAC----AT--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAA</genome_strand>
        <mrna_strand>TTTTTTNTGGGCAAGAAAAGGAAATAATATTAACCACGAAAGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCGGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAATTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574049" ref_strand="+" ref_description="SGN-E574049 [33454]">
      <seq>ttttttttgggcagaaaagaaactaatattaccacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgcaggcatgtcggcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagacaggaagagtccaccaacacgggtcagaaaccaataaccctttcaaccttttgtctcctaacacatccttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32612" stop="33840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32881" g_stop="33540" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E574049" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32881" e_stop="33540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGCTGGGCAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAG-CAGGGAGAGT-CAACAACAC-GGTCAGAAA-CAATGACCTTTTCAA-C-TTTGTCTCCTAGCACATCCTTCA</genome_strand>
        <mrna_strand>TTTTTTTTGGGC-AGAAAAGAAACTAATATTACCACGAATGTCAAAACA-AAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAA-ATA--AGTAGGAAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCAGGCATGTCGGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGACAGGAAGAGTCCACCAACACGGGTCAGAAACCAATAACCCTTTCAACCTTTTGTCTCCTAACACATCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707616" ref_strand="+" ref_description="SGN-E707616 [FA33CA07]">
      <seq>cgtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttaattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34155" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33856" g_stop="32884" g_length="973"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="971" r_length="971" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E707616" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>973</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33856" e_stop="32884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTC</genome_strand>
        <mrna_strand>CGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGG-T-TAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353791" ref_strand="-" ref_description="SGN-E353791 [cTOS-10-G19]">
      <seq>gcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccagctcaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33712" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33412" g_stop="32884" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="530" polyA_stop="557"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E353791" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353791" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33412" e_stop="32884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTC</genome_strand>
        <mrna_strand>GCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E552058" ref_strand="+" ref_description="SGN-E552058 [cTSB-2-L14]">
      <seq>gagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34057" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33757" g_stop="32885" g_length="873"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E552058" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33757" e_stop="32885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCT</genome_strand>
        <mrna_strand>GAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E593879" ref_strand="+" ref_description="SGN-E593879 [37119]">
      <seq>aggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttcgttttgactttcgtggttaatattatttccttttcttgcccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33837" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33537" g_stop="32886" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E593879" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33537" e_stop="32886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCAGC</genome_strand>
        <mrna_strand>AGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTCGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E594265" ref_strand="+" ref_description="SGN-E594265 [37513]">
      <seq>ccccgggctgcatgaatcggccgaggttttttttttgggcaagaaaagaaactaatattaaccacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgcaggcatgtcggcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32588" stop="33728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32887" g_stop="33428" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="577" r_length="543" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E594265" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E594265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32887" e_stop="33428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGCAAGAAAATAAACT-ATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATT</genome_strand>
        <mrna_strand>TTGGGCAAGAAAAGAAACTAATATTAACCACGAATGTCAAAACAAAAA-GAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAA-ATA--AGTAGGAAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCAGGCATGTCGGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713440" ref_strand="+" ref_description="SGN-E713440 [FB08CE10]">
      <seq>aataagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33949" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33649" g_stop="32888" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="762" r_length="762" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="763" polyA_stop="777"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E713440" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33649" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AATAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712729" ref_strand="+" ref_description="SGN-E712729 [FB05CF07]">
      <seq>ggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33926" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33626" g_stop="32888" g_length="739"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="740" polyA_stop="750"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E712729" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33626" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347735" ref_strand="+" ref_description="SGN-E347735 [cTOF-26-C14]">
      <seq>tcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttagggtataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33918" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33618" g_stop="32888" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="732" polyA_stop="742"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E347735" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33618" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGGTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702547" ref_strand="+" ref_description="SGN-E702547 [FA19AB04]">
      <seq>gcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33914" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33614" g_stop="32888" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="728" polyA_stop="738"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E702547" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33614" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543325" ref_strand="+" ref_description="SGN-E543325 [TUS-65-B9](-)">
      <seq>gtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttatttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgaggggggcccggtcccaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33903" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33603" g_stop="33431" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33430" i_stop="33359" i_length="72">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33358" g_stop="32888" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="643" r_length="470" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="646" polyA_stop="673"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E543325" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33603" e_stop="33431"/>
          <exon e_start="33358" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG........................................................................ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTA-TTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414996" ref_strand="-" ref_description="SGN-E414996 [STM-20-F1]">
      <seq>ggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagttccttttcttgcccaaaaaaaaaaaaaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33869" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33569" g_stop="32888" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="689" r_length="689" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="690" polyA_stop="702"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E414996" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414996" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33569" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A--G--GGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717027" ref_strand="+" ref_description="SGN-E717027 [FB18CH08]">
      <seq>aggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaanaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33846" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33546" g_stop="32888" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="660" polyA_stop="675"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E717027" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33546" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E592121" ref_strand="+" ref_description="SGN-E592121 [45848]">
      <seq>gtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33832" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33532" g_stop="32888" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E592121" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33532" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567133" ref_strand="-" ref_description="SGN-E567133 [11211]">
      <seq>gagacaaagttgaaaaggttattgtttctgaccgtttgttggactctgcctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33825" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33525" g_stop="32888" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="640" polyA_stop="668"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E567133" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567133" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33525" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTTTGTTGGACTCTGCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455998" ref_strand="-" ref_description="SGN-E455998 [cSTS-28-A8]">
      <seq>aaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagttccttttcttgccaaaaaaaaaaaaaaaaaaaaaaactcgagactagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33820" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33520" g_stop="32888" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="641" polyA_stop="662"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E455998" ref_strand="-">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455998" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33520" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A--G--GGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTCCTTTTCTTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590128" ref_strand="-" ref_description="SGN-E590128 [43718]">
      <seq>gaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttagcgttataattctctttttgttttgacattcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33814" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33514" g_stop="32888" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="629" polyA_stop="642"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E590128" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590128" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33514" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAG-GTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGCGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579819" ref_strand="+" ref_description="SGN-E579819 [86952]">
      <seq>gttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33790" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33490" g_stop="32888" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E579819" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579819" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33490" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249173" ref_strand="-" ref_description="SGN-E249173 [cLEF-50-K7]">
      <seq>tgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatgtaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33772" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33472" g_stop="32888" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="587" polyA_stop="597"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E249173" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249173" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33472" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTC-TTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGTAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418182" ref_strand="-" ref_description="SGN-E418182 [STM-27-C13]">
      <seq>cgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttctattcttgcccaaaaaaaaaaaaaaaaaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33742" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33443" g_stop="32888" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="558" polyA_stop="577"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E418182" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418182" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33443" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTATTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306385" ref_strand="+" ref_description="SGN-E306385 [cLEX-13-N5]">
      <seq>gctaacatggagagaattatgaaggcacaggcacttaaggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagataaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaannnaaaaaaannnaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33742" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33442" g_stop="32888" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="555" r_length="555" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E306385" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33442" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAAGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGATAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575626" ref_strand="+" ref_description="SGN-E575626 [35279]">
      <seq>ctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattctttttagaatggcagttccatgttaggttataattctcttttgttttgactttcgtggttaatattatttccttttcttgcccaaaagaaaaaaaagaaaaggcaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33741" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33441" g_stop="32888" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="558" polyA_stop="569"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575626" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33441" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTC-TTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC--TTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610886" ref_strand="+" ref_description="SGN-E610886 [60629]">
      <seq>ctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33741" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33441" g_stop="32888" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="558" polyA_stop="571"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E610886" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E610886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33441" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265790" ref_strand="-" ref_description="SGN-E265790 [cLEI-11-N8]">
      <seq>acatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtttagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatcccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33738" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33438" g_stop="32888" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="552" polyA_stop="566"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E265790" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265790" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33438" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>ACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTTTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATCCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716387" ref_strand="+" ref_description="SGN-E716387 [FB16DF07]">
      <seq>catgtgagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33737" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33437" g_stop="32888" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="552" polyA_stop="563"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E716387" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33437" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATG-GAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CATGTGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567029" ref_strand="-" ref_description="SGN-E567029 [11089]">
      <seq>tgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgagtgagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccctcgtgccgaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33723" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33423" g_stop="32888" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="539" polyA_stop="567"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E567029" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567029" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33423" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAG-GAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGTGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484897" ref_strand="+" ref_description="SGN-E484897 [cSTE-15-B22]">
      <seq>aaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgcttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttactttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccannnnaaaaaannnnnnnnnnnnn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33721" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33421" g_stop="32888" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E484897" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33421" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGC-TTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTACTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610933" ref_strand="+" ref_description="SGN-E610933 [60677]">
      <seq>ttctagcaagaagacatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33679" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33380" g_stop="32888" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E610933" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E610933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33380" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TTCTAGCAAGAAGA-CATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350234" ref_strand="+" ref_description="SGN-E350234 [cTOS-4-F7]">
      <seq>tctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33679" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33379" g_stop="32888" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="493" polyA_stop="505"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E350234" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33379" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467769" ref_strand="-" ref_description="SGN-E467769 [cSTB-1-L19]">
      <seq>agcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagttccttttcttgcccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33676" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33376" g_stop="32888" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="497" polyA_stop="510"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E467769" ref_strand="-">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E467769" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33376" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A--G--GGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485966" ref_strand="-" ref_description="SGN-E485966 [cSTE-20-G20]">
      <seq>agaagcccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaactcaagactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33672" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33372" g_stop="32888" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="489" polyA_stop="506"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E485966" ref_strand="-">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485966" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33372" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AGAAGCCCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567113" ref_strand="+" ref_description="SGN-E567113 [11187]">
      <seq>agaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33672" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33372" g_stop="32888" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="489" polyA_stop="499"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E567113" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33372" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E596966" ref_strand="+" ref_description="SGN-E596966 [40459]">
      <seq>acatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttggctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33665" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33366" g_stop="32888" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E596966" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E596966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33366" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTT-GCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>ACATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335524" ref_strand="+" ref_description="SGN-E335524 [cTOE-2-B3]">
      <seq>ccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctntttttgttttgacattncgtggttgatatttagtttattttcttgcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33666" stop="32606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33366" g_stop="32888" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E335524" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33366" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCT-TTTTTGTTTTGACATT-CGTGGTTGATA--TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTNTTTTTGTTTTGACATTNCGTGGTTGATATTTAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575514" ref_strand="+" ref_description="SGN-E575514 [35150]">
      <seq>tggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgatgagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgcattaagttcattattaatgtgttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatctgatacggttttaatgccattctttcagaatggcagttccatgttatgttataattctctttttgttttgacattcgtggttaatattatttccttttcttgcccaaaaaaaacactaaaaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33663" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33363" g_stop="32888" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575514" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33363" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTG-ATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGATGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGCATTAAGTTCATTATTAATGTGTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATCTGATACGGTTTTAATGCCATTCTTTCAGAATGGCAGTTCCATGTTATGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716662" ref_strand="+" ref_description="SGN-E716662 [FB17CG07]">
      <seq>gataactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33649" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33349" g_stop="32888" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="463" polyA_stop="493"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E716662" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33349" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GATAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733784" ref_strand="+" ref_description="SGN-E733784 [LB10DG05]">
      <seq>cgatctccatcatggatgagctaaggaagagggctgatgcacacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33647" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33348" g_stop="32888" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="462" polyA_stop="481"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E733784" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33348" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CGATCTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCACACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E566723" ref_strand="+" ref_description="SGN-E566723 [5162]">
      <seq>ctccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttggctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattcagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33644" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33344" g_stop="32888" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="462" polyA_stop="476"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E566723" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E566723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33344" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTT-GCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTCAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586377" ref_strand="+" ref_description="SGN-E586377 [60432]">
      <seq>cctcgtgccgaattcggcacgaggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttggttttgacattcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33624" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33317" g_stop="32888" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="452" r_length="430" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="453" polyA_stop="474"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E586377" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33317" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTGGTTTTGACATTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586110" ref_strand="-" ref_description="SGN-E586110 [60159]">
      <seq>gcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgactttcgtggttaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33610" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33310" g_stop="32888" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="426" r_length="426" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="427" polyA_stop="444"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E586110" ref_strand="-">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586110" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33310" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACTTTCGTGGTTAATATTATTTCCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222336" ref_strand="+" ref_description="SGN-E222336 [cLEL-16-B21](-)">
      <seq>aagaatgacaagtctgtaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccnaaaaaaaaaaaaaaaaaactcgagagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33604" stop="32589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33304" g_stop="32888" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="417" polyA_stop="435"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E222336" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33304" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AAGAATGACAAGTCTGT-AAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222497" ref_strand="+" ref_description="SGN-E222497 [cLEL-16-B19](-)">
      <seq>gaatgacaagtctgtaaggacttggttctccttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaaactcgagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33602" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33302" g_stop="32888" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="416" polyA_stop="434"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E222497" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33302" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGACAAGTCTGTGAAGGACTTGGTTCT-CTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GAATGACAAGTCTGT-AAGGACTTGGTTCTCCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227340" ref_strand="+" ref_description="SGN-E227340 [cLEL-30-J9](-)">
      <seq>aagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccccaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33595" stop="32589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33295" g_stop="32888" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="410" polyA_stop="436"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E227340" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33295" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616073" ref_strand="+" ref_description="SGN-E616073 [65878]">
      <seq>ctgtgaaggacttggtcctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33591" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33291" g_stop="32888" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E616073" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33291" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTGTGAAGGACTTGGTCCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350229" ref_strand="+" ref_description="SGN-E350229 [cTOS-4-D21]">
      <seq>tgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33590" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33290" g_stop="32888" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="404" polyA_stop="413"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E350229" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33290" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356246" ref_strand="+" ref_description="SGN-E356246 [cTOS-20-F20]">
      <seq>tgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33590" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33290" g_stop="32888" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="404" polyA_stop="413"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E356246" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33290" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227557" ref_strand="+" ref_description="SGN-E227557 [cLEL-30-J9](-)">
      <seq>cttgctttttaagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaaaatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaaagccgttcttttagaatggcagttcaatgttagggtaaaattctcttttttgttttgacattcgtggttgatatagtttattttcttgccccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33572" stop="32589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33272" g_stop="32888" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="386" polyA_stop="419"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E227557" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33272" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTTGCTTTTTAAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAAATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAAAGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGGTAAAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586555" ref_strand="+" ref_description="SGN-E586555 [75387]">
      <seq>ctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33550" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33250" g_stop="32888" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="365" polyA_stop="375"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E586555" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33250" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223230" ref_strand="+" ref_description="SGN-E223230 [cLEL-14-D21](-)">
      <seq>ctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33550" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33250" g_stop="32888" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="365" polyA_stop="387"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E223230" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33250" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTC-TTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586137" ref_strand="+" ref_description="SGN-E586137 [60186]">
      <seq>caggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgataggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33543" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33243" g_stop="32888" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="357" polyA_stop="366"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E586137" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33243" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGAT-AGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222429" ref_strand="+" ref_description="SGN-E222429 [cLEL-16-B19](-)">
      <seq>ggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33541" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33241" g_stop="32888" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="355" polyA_stop="371"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E222429" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33241" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E587352" ref_strand="+" ref_description="SGN-E587352 [78468]">
      <seq>gcctggaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33534" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33234" g_stop="32888" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E587352" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587352" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33234" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GCCTGGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222161" ref_strand="+" ref_description="SGN-E222161 [cLEL-16-B22](-)">
      <seq>gcctcgaggagccaaacacctttgcaacagaattctcaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33534" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33234" g_stop="32888" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="347" polyA_stop="365"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E222161" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33234" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GCCTCGAGGAGCCAAACACCTTT-GCAACAGAATTCTCAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309244" ref_strand="+" ref_description="SGN-E309244 [cLEY-22-I1]">
      <seq>ccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggaaatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcgacaagatggaggatgtggatgaagttcattaatgttatgatagttacatgggttcctttactactactttatgacctagtctttgctttatcccatcagaacaatatgtgagggttctaatgccgaacttttacaatggcaattgaatgggaggatataattctattttttgcattgacattcgtggttgatacaactgattatcttgcccaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33523" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33223" g_stop="32888" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E309244" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33223" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAAATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCGACAAGATGGAGGATGTGGATGAAGTTCATTAATGTTATGATAGTTACATGGGTTCCTTTACTACTACTTTATGACCTAGTCTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTCTAATGCCGAACTTTTACAATGGCAATTGAATGGGAGGATATAATTCTATTTTTTGCATTGACATTCGTGGTTGATACAACTGATTATCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E615334" ref_strand="+" ref_description="SGN-E615334 [65131]">
      <seq>caacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33509" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33209" g_stop="32888" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="324" polyA_stop="355"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E615334" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E615334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33209" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>CAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E226199" ref_strand="+" ref_description="SGN-E226199 [cLEL-31-C11](-)">
      <seq>aggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttttttgttttgacattcgtggttgatatagtttattttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33496" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33196" g_stop="32888" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="311" polyA_stop="334"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E226199" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E226199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33196" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTC-TTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>AGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232129" ref_strand="+" ref_description="SGN-E232129 [cLEL-5-A1](-)">
      <seq>tgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggagcaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttcacattcctggttgatatagtttattttctaacccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33492" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33192" g_stop="32888" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="306" polyA_stop="322"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E232129" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>305</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33192" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGCAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTCACATTCCTGGTTGATATAGTTTATTTTCTAACCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E587277" ref_strand="+" ref_description="SGN-E587277 [78392]">
      <seq>gaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33488" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33188" g_stop="32888" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="303" polyA_stop="328"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E587277" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33188" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTA--A-TGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>GAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTTGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232629" ref_strand="+" ref_description="SGN-E232629 [cLEL-5-A1](-)">
      <seq>ttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgccccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33384" stop="32589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33084" g_stop="32888" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="198" polyA_stop="214"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E232629" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>197</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33084" e_stop="32888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</genome_strand>
        <mrna_strand>TTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713002" ref_strand="+" ref_description="SGN-E713002 [FB06BG09]">
      <seq>gtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcacaacaatatgtgagggttttaatgccgttcttttaaaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33844" stop="32589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33544" g_stop="32889" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E713002" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33544" e_stop="32889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCC</genome_strand>
        <mrna_strand>GTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCACAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAAAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E714541" ref_strand="+" ref_description="SGN-E714541 [FB11DA01]">
      <seq>cttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33943" stop="32590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33643" g_stop="32890" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E714541" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33643" e_stop="32890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</genome_strand>
        <mrna_strand>CTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707378" ref_strand="+" ref_description="SGN-E707378 [FA32DD02]">
      <seq>catttcttcatcacatacatttttagaaattagaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33925" stop="32590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33625" g_stop="32890" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="768" r_length="736" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E707378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33625" e_stop="32890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</genome_strand>
        <mrna_strand>GAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590929" ref_strand="+" ref_description="SGN-E590929 [44535]">
      <seq>gaaaaggaaataatatttaaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32593" stop="33854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32890" g_stop="33554" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E590929" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32890" e_stop="33554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGT</genome_strand>
        <mrna_strand>GAAAAGGAAATAA--TAT-TTAACCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357017" ref_strand="+" ref_description="SGN-E357017 [cTOS-22-M19]">
      <seq>tagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33677" stop="32590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33377" g_stop="32890" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E357017" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33377" e_stop="32890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</genome_strand>
        <mrna_strand>TAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349910" ref_strand="+" ref_description="SGN-E349910 [cTOS-3-G12]">
      <seq>atcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33658" stop="32590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33358" g_stop="32890" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E349910" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33358" e_stop="32890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</genome_strand>
        <mrna_strand>ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211581" ref_strand="+" ref_description="SGN-E211581 [cLEC-67-O7]">
      <seq>cccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33653" stop="32590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33353" g_stop="32890" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E211581" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33353" e_stop="32890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</genome_strand>
        <mrna_strand>CCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703370" ref_strand="+" ref_description="SGN-E703370 [FA21BC05]">
      <seq>gagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacattcgtggttgatatagtttattttcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33985" stop="32591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33685" g_stop="32891" g_length="795"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="795" r_length="795" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703370" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33685" e_stop="32891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGC</genome_strand>
        <mrna_strand>GAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454240" ref_strand="+" ref_description="SGN-E454240 [cSTS-22-L3]">
      <seq>gaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggtttgtttttaatgccattcttttangatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagttccttttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33890" stop="32592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33590" g_stop="32892" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="707" r_length="707" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E454240" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33590" e_stop="32892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A-GG---G-TTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTTG</genome_strand>
        <mrna_strand>GAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTGTTTTTAATGCCATTCTTTTANGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTCCTTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584547" ref_strand="+" ref_description="SGN-E584547 [10374]">
      <seq>aaaggaaataatatttaaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32593" stop="33637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32892" g_stop="33337" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E584547" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E584547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32892" e_stop="33337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCAT</genome_strand>
        <mrna_strand>AAAGGAAATAA--TAT-TTAACCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E593217" ref_strand="+" ref_description="SGN-E593217 [36443]">
      <seq>ggacttggttctcttgcttttttgagactgcccttctaacctcaagtttcagccttgaggagccaaacacctttggcacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagtttcttttcttgaaaaaaacaaaagaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33584" stop="32592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33284" g_stop="32893" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="395" polyA_stop="406"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E593217" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33284" e_stop="32893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTTGGTTCTCTTGC-TTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATA-TAGTTTATTTTCTT</genome_strand>
        <mrna_strand>GGACTTGGTTCTCTTGCTTTTTTGAGACTGCCCTTCTAACCTCAAGTTTCAGCCTTGAGGAGCCAAACACCTTTGGC-ACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTAGTTTCTTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E615232" ref_strand="+" ref_description="SGN-E615232 [65028]">
      <seq>agaaaaggaaataatattaaccacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32594" stop="33615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32894" g_stop="33315" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E615232" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E615232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32894" e_stop="33315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAA-TAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAG</genome_strand>
        <mrna_strand>AGAAAAGGAAATAATATTAACCACGAATGTCAAAACAA-AAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287572" ref_strand="+" ref_description="SGN-E287572 [cLES-9-D14]">
      <seq>taaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttagcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgctttgacattcgtggttgatatagcttattttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33627" stop="32595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33327" g_stop="32895" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E287572" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33327" e_stop="32895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTC</genome_strand>
        <mrna_strand>TAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTAGCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGCTTTGACATTCGTGGTTGATATAGCTTATTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576551" ref_strand="+" ref_description="SGN-E576551 [59786]">
      <seq>ggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcgtggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattatttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33747" stop="32601"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33447" g_stop="32898" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576551" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33447" e_stop="32898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATT</genome_strand>
        <mrna_strand>GGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCGTGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATTATTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585680" ref_strand="+" ref_description="SGN-E585680 [68142]">
      <seq>aaataatattaaccacgaaagtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcggtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaatttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagctttttgccctcaaattccttcaggtgaccaattgagtactcatcaatggcatcaaccatgtaaagtacctcatatccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32602" stop="34023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32901" g_stop="33723" g_length="823"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="825" r_length="825" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E585680" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32901" e_stop="33723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAAC----AT--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCT</genome_strand>
        <mrna_strand>AAATAATATTAACCACGAAAGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCGGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAATTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGGTGACCAATTGAGTACTCATCAATGGCATCAACCATGTAAAGTACCTCATATCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590998" ref_strand="+" ref_description="SGN-E590998 [44606]">
      <seq>ataatatttaaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagcttttttgccctcaaattccttcagctgaccaaatgagtactcatcaatggcatcaaccatgtaaagtacctcatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32602" stop="34020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32901" g_stop="33720" g_length="820"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="818" r_length="818" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E590998" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32901" e_stop="33720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGC-TTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATC</genome_strand>
        <mrna_strand>ATAATAT-TTAACCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTTGCCCTCAAATTCCTTCAGCTGACCAAATGAGTACTCATCAATGGCATCAACCATGTAAAGTACCTCATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585656" ref_strand="+" ref_description="SGN-E585656 [68118]">
      <seq>aaataatattaaccacgaaagtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcggtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaatttttccttcaattcttcctgctttttcttctcatcttcactctcatcaaagcttgaggccttccttggtagcagaaacaagcttttttgccctcaaattccttcaggtgaccaattgagtactcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32602" stop="33989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32901" g_stop="33689" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="793" r_length="793" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E585656" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32901" e_stop="33689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAAC----AT--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCA-AGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGC-TTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCA</genome_strand>
        <mrna_strand>AAATAATATTAACCACGAAAGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCGGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAATTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTTGCCCTCAAATTCCTTCAGGTGACCAATTGAGTACTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454034" ref_strand="+" ref_description="SGN-E454034 [cSTS-21-N22]">
      <seq>taatatttaaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcaggggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatncttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgnagccttnncttggtagcagaaacaagctttttgccctcaaattccttcagctgaccaattgagtactcatcaatggcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32606" stop="33997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32902" g_stop="33697" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="795" r_length="795" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E454034" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E454034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32902" e_stop="33697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCA-GGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTT-CCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATC</genome_strand>
        <mrna_strand>TAATAT-TTAACCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATNCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGNAGCCTTNNCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAGTACTCATCAATGGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590342" ref_strand="+" ref_description="SGN-E590342 [43936]">
      <seq>aataatattaaccacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccccatgctagagtcccntaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcatggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaactttccttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32603" stop="33874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32902" g_stop="33574" g_length="673"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E590342" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32902" e_stop="33574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAG--CCATGCTGGAGTCCC-TAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAA</genome_strand>
        <mrna_strand>AATAATATTAACCACGAATGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCCCATGCTAGAGTCCCNTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCATGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTT-TCCTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590083" ref_strand="+" ref_description="SGN-E590083 [43671]">
      <seq>ataatattaaccacgaaagtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcggtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaaatttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagcttttgccctcaaattccttcagctgaccaattgagtactcatcaatggcatcaaccatgtaaagtacctcatatcccttcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32606" stop="34029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32903" g_stop="33729" g_length="827"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="829" r_length="829" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E590083" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590083" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32903" e_stop="33729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAAC----AT--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTC-AAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCT</genome_strand>
        <mrna_strand>ATAATATTAACCACGAAAGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCGGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAAATTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGC-TTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAGTACTCATCAATGGCATCAACCATGTAAAGTACCTCATATCCCTTCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605751" ref_strand="+" ref_description="SGN-E605751 [21679]">
      <seq>aatatattaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32612" stop="33733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32903" g_stop="33433" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E605751" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E605751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32903" e_stop="33433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTC</genome_strand>
        <mrna_strand>AATATAT-TACCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425228" ref_strand="-" ref_description="SGN-E425228 [STM-44-D10]">
      <seq>caaggaaggcttcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatattagttcaaaatcttgcccaaaaaaaaaaaaaaaagtagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33929" stop="32600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33629" g_stop="32905" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="749" polyA_stop="765"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E425228" ref_strand="-">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425228" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33629" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A--G--GGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>CAAGGAAGGCTTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585117" ref_strand="+" ref_description="SGN-E585117 [66835]">
      <seq>ggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttgcttgacattcgtggttaaatattatttccttttcttggccaaaaaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33836" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33536" g_stop="32905" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="648" polyA_stop="658"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E585117" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33536" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>GGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC--TTTTG-CTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453505" ref_strand="+" ref_description="SGN-E453505 [cSTS-20-A6]">
      <seq>ccgtgttgtggactctccctgccgtttggtgaccggtgagtacggctggaccgctaacatggagagaatcatgaaggcacaggcacctagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggaacttggttctcttgctttttgaaactgcccttctaacctcaggtttcagccttgaggaagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaagttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33794" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33494" g_stop="32905" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="610" polyA_stop="623"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E453505" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33494" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGG-ACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGG-AGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATG-AGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>CCGTGTTGTGGACTCTCCCTGCCGTTTGGTGACCGGTGAGTACGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACCTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGAACTTGGTTCTCTTGCTTTTTGAAACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAAGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452017" ref_strand="+" ref_description="SGN-E452017 [cSTS-15-I16]">
      <seq>gtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttggccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33787" stop="32593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33487" g_stop="32905" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="600" polyA_stop="610"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E452017" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33487" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>GTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468036" ref_strand="-" ref_description="SGN-E468036 [cSTB-2-I12]">
      <seq>tgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33775" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33475" g_stop="32905" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="588" polyA_stop="608"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E468036" ref_strand="-">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468036" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33475" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>TGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577168" ref_strand="+" ref_description="SGN-E577168 [33363]">
      <seq>gctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33774" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33474" g_stop="32905" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="587" polyA_stop="604"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E577168" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33474" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>GCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E402081" ref_strand="+" ref_description="SGN-E402081 [PPC-6-E14]">
      <seq>tgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaaactcgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33758" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33458" g_stop="32905" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="571" polyA_stop="590"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E402081" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33458" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>TGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414337" ref_strand="-" ref_description="SGN-E414337 [STM-19-I12]">
      <seq>agtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatccctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgttttgacattcgtggttaatatgaaaaccttttcttgcccaaaaaaaaaaaagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33756" stop="32606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33456" g_stop="32905" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="577" polyA_stop="590"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E414337" ref_strand="-">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414337" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33456" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGAT-CCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A--G--GGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>AGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGACATTCGTGGTTAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601975" ref_strand="+" ref_description="SGN-E601975 [55027]">
      <seq>tatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtttgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33754" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33454" g_stop="32905" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="567" polyA_stop="598"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E601975" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33454" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>TATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTTTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E411267" ref_strand="-" ref_description="SGN-E411267 [STM-14-K18]">
      <seq>gagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33731" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33431" g_stop="32905" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="544" polyA_stop="557"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E411267" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E411267" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33431" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>GAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E598080" ref_strand="+" ref_description="SGN-E598080 [73748]">
      <seq>catggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33695" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33395" g_stop="32905" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="506" polyA_stop="528"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E598080" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33395" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCA---TTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>CATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCC-AA-ACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E594113" ref_strand="+" ref_description="SGN-E594113 [37357]">
      <seq>caagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33596" stop="32586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33296" g_stop="32905" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="408" polyA_stop="417"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E594113" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E594113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33296" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>CAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E597690" ref_strand="+" ref_description="SGN-E597690 [67561]">
      <seq>ttttttttgggcaagaaaaggaaataatatttaaccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32584" stop="33568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32905" g_stop="33268" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="388" r_length="361" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E597690" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E597690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32905" e_stop="33268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAG</genome_strand>
        <mrna_strand>TAT-TTAACCACGAATGTCAAA-CAAAAA-GAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E615727" ref_strand="+" ref_description="SGN-E615727 [65529]">
      <seq>ctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaatattatttccttttcttgcccaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33545" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33245" g_stop="32905" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E615727" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E615727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33245" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>CTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606737" ref_strand="+" ref_description="SGN-E606737 [22687]">
      <seq>ggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgtttgacattcgtggttaaataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33495" stop="32605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33195" g_stop="32905" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E606737" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>291</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E606737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33195" e_stop="32905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATA</genome_strand>
        <mrna_strand>GGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTG-TTTGACATTCGTGGTT-AAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591030" ref_strand="+" ref_description="SGN-E591030 [44733]">
      <seq>atattaaccacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgagccttccttggtagcaaaacaagctttttgccctcaaattccttcacgtgaccaatttgagtactcatcaatggcatcaaccatgtaaaagtacttcatatccttcttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32606" stop="34031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32906" g_stop="33731" g_length="826"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="824" r_length="824" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E591030" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E591030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32906" e_stop="33731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCT--CACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAA-TTGAATACTCATCAATGGCATCAACCATGT-AAAGCACCTCATATCCCTTCTTCTTC</genome_strand>
        <mrna_strand>ATATTAACCACGAATGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGA-GCCTTCCTTGGTAGCA-AAACAAGCTTTTTGCCCTCAAATTCCTTCACGTGACCAATTTGAGTACTCATCAATGGCATCAACCATGTAAAAGTACTTCATAT-CCTTCTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603584" ref_strand="+" ref_description="SGN-E603584 [56676]">
      <seq>accacgaatgtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32612" stop="33513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32912" g_stop="33213" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E603584" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>302</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32912" e_stop="33213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAA</genome_strand>
        <mrna_strand>ACCACGAATGTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577403" ref_strand="+" ref_description="SGN-E577403 [35417]">
      <seq>ccacgaatgtcaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagctttttgccctcaaattcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32613" stop="33964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32913" g_stop="33664" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="750" r_length="750" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E577403" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32913" e_stop="33664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTT</genome_strand>
        <mrna_strand>CCACGAATGTC-AAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575625" ref_strand="+" ref_description="SGN-E575625 [35278]">
      <seq>ctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttccgttttgactttcgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33741" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33441" g_stop="32914" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575625" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33441" e_stop="32914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTG</genome_strand>
        <mrna_strand>CTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTCCGTTTTGACTTTCGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E571745" ref_strand="+" ref_description="SGN-E571745 [30791]">
      <seq>caaaaagcttgtttctgctaccaaggaaggctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctagagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttatggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttgtttgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33950" stop="32626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33650" g_stop="32920" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="726" r_length="726" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E571745" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33650" e_stop="32920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACA</genome_strand>
        <mrna_strand>CAAAAAGCTTGTTTCTGCTACCAAGGAAGG-CTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTA-GAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTATGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC--TTTTG-TTTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303121" ref_strand="+" ref_description="SGN-E303121 [cLEX-5-M5]">
      <seq>tgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttggtttgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33902" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33602" g_stop="33431" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33430" i_stop="33359" i_length="72">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33358" g_stop="32920" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="611" r_length="439" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303121" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33602" e_stop="33431"/>
          <exon e_start="33358" e_stop="32920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACA</genome_strand>
        <mrna_strand>TGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG........................................................................ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGGTTTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576422" ref_strand="+" ref_description="SGN-E576422 [59637]">
      <seq>gtcaaaacaaaaagagaattataacctaacatggaactgccattctaaaagaatggcattaaaaccctatcacatattgttctgatgggataaagcaaaaactagagaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaaattcttcctgctttttcttctcatcttcaactctcatcaagctttgaggccttccttggtagcaagaaaccaagctttttgccctcaaattccttcagctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32621" stop="33972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32921" g_stop="33672" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E576422" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32921" e_stop="33672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACA-T--TAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTC-AATTCTTCCTGCTTTTTCTTCTCATCTTC-ACTCTCATCAAGC-TTGAGGCCTTCCTTGGTAGC-AGAAA-CAAGCTTTTTGCCCTCAAATTCCTTCAGCTGAC</genome_strand>
        <mrna_strand>GTCAAAAC-AAAAAGAGAATTATAACCTAACATGGAACTGCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTGTTCTGATGGGATAAAGCAAAAACTAGAGAAT-AAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAAATTCTTCCTGCTTTTTCTTCTCATCTTCAACTCTCATCAAGCTTTGAGGCCTTCCTTGGTAGCAAGAAACCAAGCTTTTTGCCCTCAAATTCCTTCAGCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576558" ref_strand="+" ref_description="SGN-E576558 [59794]">
      <seq>gtgaagatgagaagaaaaagcaggaagaattgagggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctctttttgttttgacttttcggtggttaataattatttcccttttcttgccccaaaaagaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33903" stop="32584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33603" g_stop="32921" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="685" r_length="685" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576558" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33603" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAGGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC-TTTTTGTTTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350203" ref_strand="+" ref_description="SGN-E350203 [cTOS-4-K20]">
      <seq>cgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33793" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33493" g_stop="32921" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="574" polyA_stop="583"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E350203" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33493" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>CGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355062" ref_strand="+" ref_description="SGN-E355062 [cTOS-18-M11]">
      <seq>cgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33793" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33493" g_stop="32921" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="574" polyA_stop="583"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E355062" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33493" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>CGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303615" ref_strand="+" ref_description="SGN-E303615 [cLEY-6-K21]">
      <seq>gtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttggtttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33766" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33466" g_stop="32921" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="547" polyA_stop="557"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303615" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33466" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>GTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGGTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257435" ref_strand="+" ref_description="SGN-E257435 [cLEG-45-O8](-)">
      <seq>aattatgaaggcacaggcccttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaaaaatgacaagtttgtgaaggacttggtttttttgctttttgagactgcccttttcccctcaggtttcagcctcgaggagccaaacccctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaaagttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgtttttttagaatggcagttcaatgttaggttataatttttttttttgtttggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33728" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33428" g_stop="32921" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="509" polyA_stop="548"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E257435" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33428" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>AATTATGAAGGCACAGGCCCTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAAAATGACAAGTTTGTGAAGGACTTGGTTTTTTTGCTTTTTGAGACTGCCCTTTTCCCCTCAGGTTTCAGCCTCGAGGAGCCAAACCCCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAAAGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTTTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTTTTTTTTTTGTTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219014" ref_strand="+" ref_description="SGN-E219014 [cLEL-11-C4](-)">
      <seq>tagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggtgataattctcttttttgttttgaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33707" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33407" g_stop="32921" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="488" polyA_stop="504"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E219014" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33407" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>TAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTGATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303616" ref_strand="+" ref_description="SGN-E303616 [cLEY-6-K21](-)">
      <seq>atacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33686" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33386" g_stop="32921" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="467" polyA_stop="483"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303616" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33386" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>ATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243197" ref_strand="+" ref_description="SGN-E243197 [cLEE-2-K15]">
      <seq>tcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33657" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33357" g_stop="32921" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="438" polyA_stop="448"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E243197" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33357" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>TCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219615" ref_strand="+" ref_description="SGN-E219615 [cLEL-11-C4](-)">
      <seq>agctaaggaagagggctgatgcagacaagaatacaagtctgtgaaggacttggttctcttgctttttgagactgcaccttctcacctcaggtttcagcctcgaggagccaaacaccctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgcttagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactacaactttattccctagtttttgctttatcccatcagaacaatatgttagggtttttaaagccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33630" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33330" g_stop="32921" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="413" polyA_stop="429"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E219615" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33330" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGC-CCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACA-CCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTT-TAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>AGCTAAGGAAGAGGGCTGATGCAGACAAGAAT-ACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCACCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTTAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACAACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTTAGGGTTTTTAAAGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219691" ref_strand="+" ref_description="SGN-E219691 [cLEL-24-E22](-)">
      <seq>gctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33616" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33316" g_stop="32921" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="397" polyA_stop="415"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E219691" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33316" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>GCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549763" ref_strand="+" ref_description="SGN-E549763 [TUS-6-N4]">
      <seq>caagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgacctctcatacaaaaaggagacttcaccttagacttaaccaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33605" stop="32615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33305" g_stop="32921" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E549763" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33305" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369121" ref_strand="+" ref_description="SGN-E369121 [TUS-23-K14]">
      <seq>aagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33604" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33304" g_stop="32921" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="385" polyA_stop="416"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E369121" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33304" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308635" ref_strand="+" ref_description="SGN-E308635 [cLEY-21-P24]">
      <seq>agaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33603" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33303" g_stop="32921" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="384" polyA_stop="396"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E308635" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33303" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>AGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228778" ref_strand="+" ref_description="SGN-E228778 [cLEL-29-I11](-)">
      <seq>atgcaagtctgtaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcccaggatgttgaaactcggtttgagcattgatgaggaaaacggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaaaatggaggagagtttcttaagttcattaaaggtttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaaagccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33600" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33300" g_stop="32921" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="380" polyA_stop="407"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E228778" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33300" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAG-GTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>ATG-CAAGTCTGT-AAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCCCAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAACGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAAATGGAGGAGAGTTTCTTAAGTTCATTAAAGGTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAAAGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220027" ref_strand="+" ref_description="SGN-E220027 [cLEL-24-E22](-)">
      <seq>ctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33574" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33274" g_stop="32921" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="355" polyA_stop="373"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E220027" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33274" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>CTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351605" ref_strand="+" ref_description="SGN-E351605 [cTOS-12-F24]">
      <seq>tttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33539" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33239" g_stop="32921" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="320" polyA_stop="349"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E351605" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33239" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>TTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330367" ref_strand="-" ref_description="SGN-E330367 [cTOD-4-E21]">
      <seq>tggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33512" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33212" g_stop="32921" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="293" polyA_stop="306"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E330367" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330367" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33212" e_stop="32921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAC</genome_strand>
        <mrna_strand>TGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715499" ref_strand="+" ref_description="SGN-E715499 [FB14BH04]">
      <seq>ggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctcttttttgttttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34040" stop="32622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33740" g_stop="32922" g_length="819"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="819" r_length="819" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E715499" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33740" e_stop="32922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGA</genome_strand>
        <mrna_strand>GGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229066" ref_strand="+" ref_description="SGN-E229066 [cLEL-29-I11](-)">
      <seq>tcagccccgaggagccaaacacctttggcaacagaattcccaggatgttgaaacccggtttgagccttgattaggaaaacggagatgcttatgcttacatgccagccttggaggatcctgaagctgatgctgagggcagccaaatggaggaggttgattaagttccttaatgttttgatagttttatggggtcccttactactactttattccctaggttttgctttatcccctcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttagggtataaatctcttttttgttttggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33537" stop="32620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33237" g_stop="32923" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="317" polyA_stop="347"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E229066" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33237" e_stop="32923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTG</genome_strand>
        <mrna_strand>TCAGCCCCGAGGAGCCAAACACCTTTGGCAACAGAATTCCCAGGATGTTGAAACCCGGTTTGAGCCTTGATTAGGAAAACGGAGATGCTTATGCTTACATGCCAGCCTTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCCAAATGGAGGAGGTTGATTAAGTTCCTTAATGTTTTGATAGTTTTATGGGGTCCCTTACTACTACTTTATTCCCTAGGTTTTGCTTTATCCCCTCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGGTATAAATCTCTTTTTTGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349741" ref_strand="+" ref_description="SGN-E349741 [cTOS-3-K9]">
      <seq>gaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggntataattctcttttttgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33671" stop="32624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33371" g_stop="32924" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E349741" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33371" e_stop="32924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTT</genome_strand>
        <mrna_strand>GAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGNTATAATTCTCTTTTTTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E555391" ref_strand="+" ref_description="SGN-E555391 [cTSC-2-L1]">
      <seq>caaaaaagagaattataacctaacattgaactgccattctaaaagaacggcattaaaaccctcacatattgttctgatgggataaagcaaaaactagggaataaagtagtagtaaaggaacccataaaactatcaaaacattaatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcagcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcaacatcctgtgaattctgttgccaaaggtgtttggctcctcgaggctgaaacctgaggtgagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttccttagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctggagtccctaagtgcctgtgccttcataattctctccatgttagcagtccagccatactcaccagtgaccaaacagcagggagagtcaacaacacggtcagaaacaatgaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttctccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagctttttgccctcaaattccttcagctgaccaattgaatactcatcaatggcatcaaccatgtaaagcacctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32628" stop="34016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32928" g_stop="33715" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="788" r_length="788" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E555391" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32928" e_stop="33715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTC</genome_strand>
        <mrna_strand>CAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590481" ref_strand="+" ref_description="SGN-E590481 [44077]">
      <seq>atttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33959" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33659" g_stop="32929" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E590481" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33659" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>ATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584526" ref_strand="+" ref_description="SGN-E584526 [10353]">
      <seq>gtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33832" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33532" g_stop="32929" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584526" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33532" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>GTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319482" ref_strand="+" ref_description="SGN-E319482 [cTOB-15-E23]">
      <seq>taacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttnnnnaaaaaaaannnnnnnnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33740" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33440" g_stop="32929" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="531" polyA_stop="559"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E319482" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33440" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>TAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTNNN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E406985" ref_strand="+" ref_description="SGN-E406985 [PPI-5-L13]">
      <seq>cttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttttaggatggcagttccatgttaggttataattctctttttgtttaanaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33709" stop="32625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33409" g_stop="32929" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="492" polyA_stop="511"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E406985" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33409" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTT----TTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>CTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTGGTTTTAATGCCATTCTTTTAGGATGGCAGTTCCATGTTAGGTTATAATTCTCTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232469" ref_strand="+" ref_description="SGN-E232469 [cLEL-5-L20](-)">
      <seq>aagaatgacaagtctgtgaagaccttggttctcttgctttttaagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33604" stop="32630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33304" g_stop="32929" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="377" polyA_stop="393"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E232469" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33304" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>AAGAATGACAAGTCTGTGAAGACCTTGGTTCTCTTGCTTTTTAAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232393" ref_strand="+" ref_description="SGN-E232393 [cLEL-5-L20](-)">
      <seq>aagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33604" stop="32630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33304" g_stop="32929" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="377" polyA_stop="393"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E232393" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33304" e_stop="32929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTT</genome_strand>
        <mrna_strand>AAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342387" ref_strand="+" ref_description="SGN-E342387 [cTOF-8-N24]">
      <seq>tttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaagaagaagacccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatangtttatgggttcctttactactactttattccctagtttttgctttatcccatcaaacaatatgggagggttttaatgccgttcttttagaatggcagttcatgnntaggttataatctcttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34291" stop="32651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33991" g_stop="33562" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33561" i_stop="33368" i_length="194">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33367" g_stop="33316" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="482" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33315" i_stop="33115" i_length="201">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33114" g_stop="32930" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="665" r_length="183" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E342387" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33991" e_stop="33562"/>
          <exon e_start="33367" e_stop="33316"/>
          <exon e_start="33114" e_stop="32930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTT</genome_strand>
        <mrna_strand>TTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGAAGAAGA..................................................................................................................................................................................................CCCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGG.........................................................................................................................................................................................................CTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATANGTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCA-AACAATATGGGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCATGNNTAGGTTATAA-TCTCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584525" ref_strand="+" ref_description="SGN-E584525 [10352]">
      <seq>gtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttaaaaacaaacaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33832" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33532" g_stop="32931" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584525" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33532" e_stop="32931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTT</genome_strand>
        <mrna_strand>GTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584527" ref_strand="+" ref_description="SGN-E584527 [10354]">
      <seq>gtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttaaaaaacacccccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33832" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33532" g_stop="32931" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584527" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33532" e_stop="32931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTT</genome_strand>
        <mrna_strand>GTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568737" ref_strand="+" ref_description="SGN-E568737 [13066]">
      <seq>tagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33697" stop="32631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33398" g_stop="32931" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="472" polyA_stop="482"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E568737" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33398" e_stop="32931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTA--A----TGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTT</genome_strand>
        <mrna_strand>TAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556558" ref_strand="+" ref_description="SGN-E556558 [cTSD-3-N4]">
      <seq>atgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggtttttatgccgttcttttagaatggcagttcaatgttaggttataattctctttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34098" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33798" g_stop="32932" g_length="867"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="867" r_length="867" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E556558" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33798" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>ATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTTATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E599577" ref_strand="+" ref_description="SGN-E599577 [52568]">
      <seq>gaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33868" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33568" g_stop="32932" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="637" r_length="637" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E599577" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E599577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33568" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>GAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E217899" ref_strand="+" ref_description="SGN-E217899 [cLEL-23-A13](-)">
      <seq>agagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33621" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33321" g_stop="32932" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="390" r_length="390" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="391" polyA_stop="408"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E217899" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33321" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>AGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218119" ref_strand="+" ref_description="SGN-E218119 [cLEL-23-A13](-)">
      <seq>gctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33616" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33316" g_stop="32932" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="386" polyA_stop="403"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E218119" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33316" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>GCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E216001" ref_strand="+" ref_description="SGN-E216001 [cLEL-13-I15](-)">
      <seq>agtctgtaaggacttggttctcttgctttttgagactgccccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacaganattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33594" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33294" g_stop="32932" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="365" polyA_stop="382"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E216001" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33294" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTG-CCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGA-ATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>AGTCTGT-AAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGANATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E216369" ref_strand="+" ref_description="SGN-E216369 [cLEL-13-I15](-)">
      <seq>tctcacctcaggtttcagcctcgaggagccgaacacctttggcaacagaattcacaggatgttgaaacacggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatgtaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataattctctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33551" stop="32632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33251" g_stop="32932" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="320" r_length="320" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="321" polyA_stop="338"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E216369" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33251" e_stop="32932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</genome_strand>
        <mrna_strand>TCTCACCTCAGGTTTCAGCCTCGAGGAGCCGAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACACGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGTAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205119" ref_strand="+" ref_description="SGN-E205119 [cLEC-16-C10]">
      <seq>aagagaattataacctaacattgaactgccattctaaaagaacggcattaaaaccctcacatattgttctgatgggataaagcaaaaactagggaataaagtagtagtaaaggaacccataaaactatcaaaacattaatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcagcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcaacatcctgtgaattctgttgccaaaggtgtttggctcctcgaggctgaaacctgaggtgagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttccttagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32633" stop="33699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32933" g_stop="33399" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E205119" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32933" e_stop="33399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGG</genome_strand>
        <mrna_strand>AAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585493" ref_strand="+" ref_description="SGN-E585493 [67953]">
      <seq>tgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgtttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33986" stop="32635"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33686" g_stop="32935" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="751" r_length="751" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E585493" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33686" e_stop="32935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAAT-GT-TTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTC</genome_strand>
        <mrna_strand>TGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573407" ref_strand="+" ref_description="SGN-E573407 [32714]">
      <seq>atgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtatggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgatgaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgagtaagttcattattaatgttttgatagttgatgggttcccttcctacttattgctctagtctgtgctttatcccatcagaacaatatgtgatagggtctcaatgccattctttcagaatggcagttccatgttaggtcataattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33834" stop="32636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33534" g_stop="32936" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="600" r_length="600" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E573407" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33534" e_stop="32936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCT</genome_strand>
        <mrna_strand>ATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTATGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGATGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGAGTAAGTTCATTATTAATGTTTTGATAG-TTGATGGGTTCCCTT-C--CTACTTATTGCTCTAGTCTGTGCTTTATCCCATCAGAACAATATGTGATAGGGTCTCAATGCCATTCTTTCAGAATGGCAGTTCCATGTTAGGTCATAATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267070" ref_strand="+" ref_description="SGN-E267070 [cLEI-4-G12]">
      <seq>agaattataacctaacattgaactgccattctaaaagaacggcattaaaaccctcacatattgttctgatgggataaagcaaaaactagggaataaagtagtagtaaaggaacccataaaactatcaaaacattaatgaacttaatcaacctcctccatcttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcagcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcaacatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggtgagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttccttagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctggagtccctaagtgcctgtgccttcataattctctccatgttagcagtccagccatactcaccagtgaccaaacagcagggagagtcaacaacacggtcagaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32636" stop="33802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32936" g_stop="33502" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E267070" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32936" e_stop="33502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAAC</genome_strand>
        <mrna_strand>AGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456536" ref_strand="+" ref_description="SGN-E456536 [cSTS-29-F20]">
      <seq>gagaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgttaggttataattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33903" stop="32637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33603" g_stop="32937" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456536" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33603" e_stop="32937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTC</genome_strand>
        <mrna_strand>GAGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAGGTTATAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456450" ref_strand="+" ref_description="SGN-E456450 [cSTS-29-F21]">
      <seq>gatgtgatgaccagaaaccgcagggagaggtgtcgaaggaaaagtttgagggactgtgtaaggtgatgaaaggatgtgcctaggagacaaagttgaaaaggttattggttctgaaccgtgttgtggacctctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttatggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcaaacaagaatgacaagtctgtgaaggacttggttctcttgctttatgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggacatgttgatgccgacatgccatcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgatctgatagtttatgggctcccttcctacttattctctagttgttgctttatcccatcacaacaatatgtgatactggttataatgccattcttttagaatggcagttccatgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33898" stop="32647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33565" g_stop="32947" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="665" r_length="624" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456450" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33565" e_stop="32947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTGAGGGACTGTGTAAGGTGATGA-AGGATGTG-CTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGA-CCGTGTTGTTGA-CTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--A-GGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAG</genome_strand>
        <mrna_strand>AAGTTTGAGGGACTGTGTAAGGTGATGAAAGGATGTGCCTAGGAGACAAAGTTGAAAAGGTTATTGGTTCTGAACCGTGTTGTGGACCTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTATGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAAACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTATGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGACATGTTGATGCCGACATGCCATCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGATCTGATAG-TTTATGGGCTCCCTT-C--CTAC-TTATTCTCTAGTTGTTGCTTTATCCCATCACAACAATATGTGATACTGGTTATAATGCCATTCTTTTAGAATGGCAGTTCCATGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370875" ref_strand="+" ref_description="SGN-E370875 [TUS-27-N19](-)">
      <seq>aaaggtcattgtttttgaccgtgttgttgactctccctgctgtttggtcactggtgagtaaggctggactgctaacatggaaagaattatgaaggcacaggcccttagggactccagcatggctggatacatgtttagcaaaaagaccatggagatcaacccaaagaactccatcatggatgagctaaggaaaaggggtgatgcaaacaaaaaagacaagtttgtgaaggacttggttttcttgcttttttagactgcccttttcccctcaggtttcagcctcgaggagccaaacacctttggcaacaaaattcacaggatgttgaaactcggtttgagcattgatgaggaaaacggaaatgctgatgctgacatgccagcattggaggatcctgaaactgatgctgagggcagcaaaatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactaatactttattccctagtttttgctttatcccatcaaaacaaaatgtgagggttttaatgccgtttttttaaaatggcagttcaatgttaggttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33812" stop="32640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33512" g_stop="32947" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="572" polyA_stop="613"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E370875" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33512" e_stop="32947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAG</genome_strand>
        <mrna_strand>AAAGGTCATTGTTTTTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTAAGGCTGGACTGCTAACATGGAAAGAATTATGAAGGCACAGGCCCTTAGGGACTCCAGCATGGCTGGATACATGTTTAGCAAAAAGACCATGGAGATCAACCCAAAGAACTCCATCATGGATGAGCTAAGGAAAAGGGGTGATGCAAACAAAAAAGACAAGTTTGTGAAGGACTTGGTTTTCTTGCTTTTTTAGACTGCCCTTTTCCCCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAAAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAACGGAAATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAACTGATGCTGAGGGCAGCAAAATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTAATACTTTATTCCCTAGTTTTTGCTTTATCCCATCAAAACAAAATGTGAGGGTTTTAATGCCGTTTTTTTAAAATGGCAGTTCAATGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296055" ref_strand="+" ref_description="SGN-E296055 [cLET-27-P7]">
      <seq>atgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaatgccgttcttttagaatggcagttcaatgttaggttataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33724" stop="32640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33424" g_stop="32947" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="493"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E296055" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33424" e_stop="32947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAG</genome_strand>
        <mrna_strand>ATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611617" ref_strand="+" ref_description="SGN-E611617 [61370]">
      <seq>tgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33815" stop="32648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33515" g_stop="32948" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E611617" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33515" e_stop="32948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTA</genome_strand>
        <mrna_strand>TGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451461" ref_strand="+" ref_description="SGN-E451461 [cSTS-12-H10]">
      <seq>ctcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggnttttaatgccattcttttagaatggcagttccatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33979" stop="32651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33680" g_stop="32950" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="732" r_length="732" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E451461" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33680" e_stop="32950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGG-TTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGT</genome_strand>
        <mrna_strand>CTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGNTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E598952" ref_strand="+" ref_description="SGN-E598952 [51929]">
      <seq>tgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatgtctctagttttagctttatcccatcagaccaatatgtgatagggttataatgccatgcttttagaatggcagttccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33843" stop="32651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33543" g_stop="32951" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E598952" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33543" e_stop="32951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATG</genome_strand>
        <mrna_strand>TGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATGTCTCTAGTTTTAGCTTTATCCCATCAGACCAATATGTGATAGGGTTATAATGCCATGCTTTTAGAATGGCAGTTCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450709" ref_strand="+" ref_description="SGN-E450709 [cSTS-10-M17]">
      <seq>cgagagtagacctctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcaccaggcaccttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33787" stop="32651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33493" g_stop="32951" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E450709" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33493" e_stop="32951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGTTGTTGA-CTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCA-CAGGCA-CTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATG</genome_strand>
        <mrna_strand>CGAGA-GTAGACCTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACCAGGCACCTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589821" ref_strand="+" ref_description="SGN-E589821 [43403]">
      <seq>gaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagttttagctttatcccatcagaacaatatgtgatacggttttaatgccaatccttttagaatggcagttccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34055" stop="32652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33755" g_stop="32952" g_length="804"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="805" r_length="805" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E589821" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33755" e_stop="32952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCC-GTTCTTTTAGAATGGCAGTTCAAT</genome_strand>
        <mrna_strand>GAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTAGCTTTATCCCATCAGAACAATATGTGATACGGTTTTAATGCCAATCCTTTTAGAATGGCAGTTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453167" ref_strand="+" ref_description="SGN-E453167 [cSTS-19-I17]">
      <seq>gagaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctganggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttttaatgccattcttttagaatggcagttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33903" stop="32653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33603" g_stop="32953" g_length="651"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="651" r_length="651" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E453167" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33603" e_stop="32953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTG--AGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAA</genome_strand>
        <mrna_strand>GAGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGANGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTTAATGCCATTCTTTTAGAATGGCAGTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549623" ref_strand="+" ref_description="SGN-E549623 [TUS-6-N4](-)">
      <seq>caagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggtttaatgccgttcgatagaatggcagttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33605" stop="32653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33305" g_stop="32953" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E549623" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33305" e_stop="32953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAA</genome_strand>
        <mrna_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGG-TTTAATGCCGTTC-GATAGAATGGCAGTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549650" ref_strand="+" ref_description="SGN-E549650 [TUS-6-N3](-)">
      <seq>caagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagagcaatatgtgagggttttaatgccgttctgaagaatggcagttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33605" stop="32671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33305" g_stop="32953" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E549650" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33305" e_stop="32953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAA</genome_strand>
        <mrna_strand>CAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAGCAATATGTGAGGGTTTTAATGCCGTTC-TGAAGAATGGCAGTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215156" ref_strand="+" ref_description="SGN-E215156 [cLEC-78-N22]">
      <seq>aaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttatttcctagtttttgctttatcccatcagaacaatatgtgangggtttaatgccgttcttttagaatgggcagttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33889" stop="32654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33589" g_stop="32954" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="637" r_length="637" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E215156" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33589" e_stop="32954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAAT-GGCAGTTCA</genome_strand>
        <mrna_strand>AAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTTCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGANGGGTTTAATGCCGTTCTTTTAGAATGGGCAGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709673" ref_strand="+" ref_description="SGN-E709673 [FA52DA11]">
      <seq>cggatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagttttttgctttatcccatcagaaccatatgtgagggttttaatgccgttcttttagaatggcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34096" stop="32658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33798" g_stop="32958" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="842" r_length="842" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E709673" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33798" e_stop="32958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAG-TTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAG</genome_strand>
        <mrna_strand>CGGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTTGCTTTATCCCATCAGAACCATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426529" ref_strand="+" ref_description="SGN-E426529 [STM-46-P23]">
      <seq>gccattctaaaagaatggcattaaaaccctatcacatatttttctcacgggataaagcaaaaactagagaaataagtaggaagggaacccataaactatcaaaacattaataatgaacttaatcaacctcctccatcttgctgccctcagcgtcagcttcaggatcctccaatgcaggcatgtcggcatcagcatctccgctttcctcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32682" stop="33911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32960" g_stop="33611" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E426529" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32960" e_stop="33611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCATTCTAAAAGAACGGCATTAAAACCC--TCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATT-A-A-TGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCA</genome_strand>
        <mrna_strand>GCCATTCTAAAAGAATGGCATTAAAACCCTATCACATATTTTTCTCACGGGATAAAGCAAAAACTAGAGAAATAAGTAG--G-AAGGGAACCCAT-AAACTATCAAAACATTAATAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCGTCAGCTTCAGGATCCTCCAATGCAGGCATGTCGGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293330" ref_strand="+" ref_description="SGN-E293330 [cLET-18-C19]">
      <seq>ttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaagtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtgagggttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33789" stop="32679"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33489" g_stop="32979" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E293330" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33489" e_stop="32979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAAT</genome_strand>
        <mrna_strand>TTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAAGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591233" ref_strand="+" ref_description="SGN-E591233 [44940]">
      <seq>ggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattagtgttttgatacgtttatgggttccttcctacttattctctagttttgctttatcccatcagaacaatatgtgatagggtttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33962" stop="32680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33662" g_stop="32980" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E591233" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33662" e_stop="32980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTA--A-TGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGA-GGGTTTTAA</genome_strand>
        <mrna_strand>GGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAGTGTTTTGATACGTTTATGGGTTCC-TT-C--CTAC-TTATTCTCTAG-TTTTGCTTTATCCCATCAGAACAATATGTGATAGGGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575338" ref_strand="+" ref_description="SGN-E575338 [34947]">
      <seq>catcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgaggactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggtttcctttcctacttattctctagtttttgctttatccatcagaacaatatgtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33641" stop="32689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33341" g_stop="32988" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575338" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33341" e_stop="32988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGA-GACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATT---AATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAG</genome_strand>
        <mrna_strand>CATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTTCCTT--TCCTAC-TTATTCTCTAGTTTTTGCTTTAT-CCATCAGAACAATATGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304741" ref_strand="+" ref_description="SGN-E304741 [cLEX-11-D24]">
      <seq>aaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttattccctagtttttgctttatcccatcagaacaatatgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33820" stop="32689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33520" g_stop="32989" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E304741" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33520" e_stop="32989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGA</genome_strand>
        <mrna_strand>AAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703308" ref_strand="+" ref_description="SGN-E703308 [FA21AF02]">
      <seq>ggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaagatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcttttactactactttattccctagtttttgctttatcccatcagaacaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34196" stop="32692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33896" g_stop="32992" g_length="905"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="905" r_length="905" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703308" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>905</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33896" e_stop="32992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATG</genome_strand>
        <mrna_strand>GGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAAGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCTTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319489" ref_strand="+" ref_description="SGN-E319489 [cTOB-15-G23]">
      <seq>cttagggacttcatcatggctggatacatgtctagcatgaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagaccagaatgacaagtctgcgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctacaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagatcattaatgttttgatagttatatgggttcctttactactactctattccctagattttgctttatcccatcagaacaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33709" stop="32692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33409" g_stop="32992" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E319489" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33409" e_stop="32992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATG</genome_strand>
        <mrna_strand>CTTAGGGACTTCATCATGGCTGGATACATGTCTAGCATGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACCAGAATGACAAGTCTGCGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTACAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGATCATTAATGTTTTGATAGTTATATGGGTTCCTTTACTACTACTCTATTCCCTAGATTTTGCTTTATCCCATCAGAACAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E594528" ref_strand="+" ref_description="SGN-E594528 [37782]">
      <seq>gagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttatttctctagtttttgctttaatcccatcagaacaatatgtgatcagggttttaatgcccattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34039" stop="32689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33739" g_stop="32993" g_length="747"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="747" r_length="747" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E594528" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E594528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33739" e_stop="32993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTT-ATCCCATCAGAACAATAT</genome_strand>
        <mrna_strand>GAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTACTTATTTCTCTAGTTTTTGCTTTAATCCCATCAGAACAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405412" ref_strand="+" ref_description="SGN-E405412 [PPC-18-O9]">
      <seq>tacagaaagcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattttacgcaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattattaatgttttgatagtttatgggttcccttcctacttattctctagtttttgctttatcccatcagaacaatatgtgatagggttggttttaatgccattcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33932" stop="32682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33629" g_stop="32993" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E405412" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33629" e_stop="32993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC------ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATAT</genome_strand>
        <mrna_strand>TACAGAAAGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTTTACGCAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTTGCTTTATCCCATCAGAACAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319412" ref_strand="+" ref_description="SGN-E319412 [cTOB-15-F1]">
      <seq>tatgaaggcgcatgcacttagggactccatcatggctgggtacatgtctagcaagaagaccatggtgatcaacccaaagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtatgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctgcaggagccaaacacctttggcaacagaattcacaggatgttgaaactcgggtagagcattgatgaggaaagccgaaatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggacgacgttgattaacttcattaatgtgtggatagctttatgggttcctttactactactttatcccctagtttttgctttatcccatcacaacaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33725" stop="32693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33425" g_stop="32993" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E319412" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33425" e_stop="32993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATAT</genome_strand>
        <mrna_strand>TATGAAGGCGCATGCACTTAGGGACTCCATCATGGCTGGGTACATGTCTAGCAAGAAGACCATGGTGATCAACCCAAAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTATGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTGCAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGGTAGAGCATTGATGAGGAAAGCCGAAATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGACGACGTTGATTAACTTCATTAATGTGTGGATAGCTTTATGGGTTCCTTTACTACTACTTTATCCCCTAGTTTTTGCTTTATCCCATCACAACAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692244" ref_strand="+" ref_description="SGN-E692244 [LH_Ea08D10]">
      <seq>ctgtcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcatcgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactctatcatggatgagctaaggaagagggctgatgctgacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaatccacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatagttttatgggttcctttactactactttatttcctagtttttgctttatcccatcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34139" stop="32698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33840" g_stop="32998" g_length="843"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="843" r_length="843" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E692244" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33840" e_stop="32998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAAC</genome_strand>
        <mrna_strand>CTGTCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATCGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCTATCATGGATGAGCTAAGGAAGAGGGCTGATGCTGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATCCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTTCCTAGTTTTTGCTTTATCCCATCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E598866" ref_strand="+" ref_description="SGN-E598866 [51841]">
      <seq>ctttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattattaatgttttgatagtttatgggttcccttcctacttattctctagttttcgctttatcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34009" stop="32762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33709" g_stop="33004" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E598866" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33709" e_stop="33004"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCAT</genome_strand>
        <mrna_strand>CTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTAATGTTTTGATAG-TTTATGGGTTCCCTT-C--CTAC-TTATTCTCTAGTTTTCGCTTTATCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452299" ref_strand="+" ref_description="SGN-E452299 [cSTS-16-G16]">
      <seq>gagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagaatggaggagttgattaagttcattattaatggtttgatagtttatgggttcccttcctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34108" stop="32767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33808" g_stop="33035" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="776" r_length="776" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E452299" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33808" e_stop="33035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAG-ATGGAGGAGGTTGATTAAGTTC---ATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACT</genome_strand>
        <mrna_strand>GAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGAATGGAGGA-GTTGATTAAGTTCATTATTAATGGTTTGATAG-TTTATGGGTTCCCTTCCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304740" ref_strand="+" ref_description="SGN-E304740 [cLEX-11-D22]">
      <seq>aaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcatgtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgatgaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaagttcattaatgttttgatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33820" stop="32757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33520" g_stop="33057" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E304740" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33520" e_stop="33057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAG</genome_strand>
        <mrna_strand>AAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCATGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGATGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585757" ref_strand="+" ref_description="SGN-E585757 [68220]">
      <seq>ggctttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaagttcattatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34010" stop="32767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33711" g_stop="33066" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E585757" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33711" e_stop="33066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATG</genome_strand>
        <mrna_strand>GGCTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589065" ref_strand="+" ref_description="SGN-E589065 [42631]">
      <seq>cagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctggagggcagcaaagatgggaggaggttgattaagttcatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34102" stop="32769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33802" g_stop="33069" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="737" r_length="737" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E589065" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33802" e_stop="33069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT-GAGGGCAGC-AAGAT-GGAGGAGGTTGATTAAGTTCATTA</genome_strand>
        <mrna_strand>CAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGGAGGGCAGCAAAGATGGGAGGAGGTTGATTAAGTTCATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614541" ref_strand="+" ref_description="SGN-E614541 [64329]">
      <seq>ggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33713" stop="32776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33413" g_stop="33076" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E614541" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33413" e_stop="33076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAG</genome_strand>
        <mrna_strand>GGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747476" ref_strand="+" ref_description="SGN-E747476 [GI|38154492]">
      <seq>atgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36581" stop="32777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36281" g_stop="36159" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="265" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="33077" g_length="1835"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="2100" r_length="1835" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E747476" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2100</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36281" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="33077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAA</genome_strand>
        <mrna_strand>ATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575695" ref_strand="+" ref_description="SGN-E575695 [35359]">
      <seq>ctttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcaacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatggaggaggttgattaatttcattattattaatgtcttgataggtttatgggttcccttcctacttattctctatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34009" stop="32746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33709" g_stop="33077" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575695" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33709" e_stop="33077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAA</genome_strand>
        <mrna_strand>CTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCA-ACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576409" ref_strand="+" ref_description="SGN-E576409 [59622]">
      <seq>gagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagatggaggaggttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34039" stop="32779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33739" g_stop="33079" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576409" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33739" e_stop="33079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATT</genome_strand>
        <mrna_strand>GAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584663" ref_strand="+" ref_description="SGN-E584663 [10490]">
      <seq>tgaaggatgtgctaggagacaaagttgaacaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgagggcagcaagatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33840" stop="32790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33540" g_stop="33090" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584663" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33540" e_stop="33090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGA</genome_strand>
        <mrna_strand>TGAAGGATGTGCTAGGAGACAAAGTTGAACAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAGGGCAGCAAGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729724" ref_strand="+" ref_description="SGN-E729724 [LA21DF06]">
      <seq>ccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaagacacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34217" stop="32793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33917" g_stop="33093" g_length="825"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="825" r_length="825" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E729724" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33917" e_stop="33093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGAT</genome_strand>
        <mrna_strand>CCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGACACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574533" ref_strand="+" ref_description="SGN-E574533 [34015]">
      <seq>cttcctggagaaactgaagaagaagggatctgaggtactttacatggttgatgcgattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagaccgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgaagggcagcaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34046" stop="32793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33746" g_stop="33093" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E574533" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33746" e_stop="33093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTG-AGGGCAGCAAGAT</genome_strand>
        <mrna_strand>CTTCCTGGAGAAACTGAAGAAGAAGGGATCTGAGGTACTTTACATGGTTGATGCGATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACCGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAAGGGCAGCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233246" ref_strand="+" ref_description="SGN-E233246 [cLED-6-E14]">
      <seq>gaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctgagggcagcaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33961" stop="32793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33661" g_stop="33093" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E233246" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33661" e_stop="33093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGAT</genome_strand>
        <mrna_strand>GAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGG-CACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455035" ref_strand="-" ref_description="SGN-E455035 [cSTS-25-I21]">
      <seq>cttgctgccctcagcatcagcttcaggatcctccaatgctggcatgtcggcatcaacatctccgctttcttcatcaatgctcaaaccgagtttcagcatcctgtgaattctgttgccaaaggtgtttggctcctcaaggctgaaacctgaggttagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttcctcagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctagagtccctaagtgcctgtgccttcatgattctctccatgttagcggtccagccatactcaccagtcaccaaacagcagggagagtccacaacacggtcagaaacaataaccttttcaactttgtctcctagcacatccttcatcaccttacacagtccctcaaacttttccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagctttttgccctcaaattccttcagctgaccaattgagtactcatcaatggcatcaaccatgtaaagtacctcatatcccttcacaaagctcaaatattcaggaatcaactcctcacagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32795" stop="34447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33095" g_stop="33715" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33716" i_stop="34099" i_length="384">
            <donor d_prob="0.900" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34100" g_stop="34147" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="669" r_length="48" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E455035" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E455035" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33095" e_stop="33715"/>
          <exon e_start="34100" e_stop="34147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCTCTGGAGATGTTGAGAGGAAGGTCCTCAGAATCCACAATACCCTTCACAAAGCTCAAATATTCAGGAATCAACTCATCACAGTT</genome_strand>
        <mrna_strand>CTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCGGCATCAACATCTCCGCTTTCTTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAGTACTCATCAATGGCATCAACCATGTAAAGTACCTC................................................................................................................................................................................................................................................................................................................................................................................................ATATCCCTTCACAAAGCTCAAATATTCAGGAATCAACTCCTCACAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401643" ref_strand="+" ref_description="SGN-E401643 [PPC-4-J8]">
      <seq>ggcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgacgctgaaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33675" stop="32801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33376" g_stop="33101" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E401643" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>276</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33376" e_stop="33101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGC</genome_strand>
        <mrna_strand>GGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGACGCTGAAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E693090" ref_strand="+" ref_description="SGN-E693090 [LH_Ea10G16]">
      <seq>gttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactctactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcatcgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactctatcatggatgagctaaggaagagggctgatgctgacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaatccacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgcccgcattggaggatcctgaacctgatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34256" stop="32805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33956" g_stop="33105" g_length="852"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="852" r_length="852" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E693090" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33956" e_stop="33105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGA</genome_strand>
        <mrna_strand>GTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCTACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATCGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCTATCATGGATGAGCTAAGGAAGAGGGCTGATGCTGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATCCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCCGCATTGGAGGATCCTGAACCTGATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404183" ref_strand="+" ref_description="SGN-E404183 [PPC-12-L24]">
      <seq>ccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgnaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaaactgatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34119" stop="32806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33819" g_stop="33106" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E404183" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33819" e_stop="33106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTG</genome_strand>
        <mrna_strand>CCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGNAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAACTGATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346069" ref_strand="+" ref_description="SGN-E346069 [cTOF-24-F22]">
      <seq>gctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattacangatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34063" stop="32806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33763" g_stop="33106" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="657" r_length="657" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E346069" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33763" e_stop="33106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTG</genome_strand>
        <mrna_strand>GCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATT-ACANGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327643" ref_strand="+" ref_description="SGN-E327643 [cTOC-20-D8]">
      <seq>agatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggnttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattgggagatcctgaagctgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34146" stop="32807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33846" g_stop="33107" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E327643" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33846" e_stop="33107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</genome_strand>
        <mrna_strand>AGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGNTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGGAGATCCTGAAGCTGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332491" ref_strand="+" ref_description="SGN-E332491 [cTOD-17-H20]">
      <seq>agatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgangaaagcggagatgctgatgctgacatgccagcattggaggatcctgaagctgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34146" stop="32807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33846" g_stop="33107" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332491" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33846" e_stop="33107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</genome_strand>
        <mrna_strand>AGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGANGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448371" ref_strand="+" ref_description="SGN-E448371 [cSTS-2-D16]">
      <seq>gaggggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34064" stop="32807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33769" g_stop="33107" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448371" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33769" e_stop="33107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</genome_strand>
        <mrna_strand>GAGG-GGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589299" ref_strand="+" ref_description="SGN-E589299 [42871]">
      <seq>ggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattggaggatcctgaagctgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33719" stop="32807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33419" g_stop="33107" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E589299" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>313</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33419" e_stop="33107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</genome_strand>
        <mrna_strand>GGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572007" ref_strand="+" ref_description="SGN-E572007 [31093]">
      <seq>ctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgctgatgccgacatgcctgcattggaggatcctgaagctgacgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34050" stop="32808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33750" g_stop="33108" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="642" r_length="642" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E572007" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33750" e_stop="33108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGC</genome_strand>
        <mrna_strand>CTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGG-CTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCCGACATGCCTGCATTGGAGGATCCTGAAGCTGACGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703016" ref_strand="+" ref_description="SGN-E703016 [FA20BC12]">
      <seq>tgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgccagcattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34314" stop="32827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34014" g_stop="33127" g_length="888"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="888" r_length="888" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703016" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>888</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34014" e_stop="33127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGG</genome_strand>
        <mrna_strand>TGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576572" ref_strand="+" ref_description="SGN-E576572 [59811]">
      <seq>aaggctgttgagaactctcccttcctggaagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgctgaaactcggtttgagcattgatgaggaaagcggagatgttgatgccgacatgccagcattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34066" stop="32827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33766" g_stop="33127" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576572" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33766" e_stop="33127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCTGTTGAGAACTCTCCCTTCCTGG-AGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGG</genome_strand>
        <mrna_strand>AAGGCTGTTGAGAACTCTCCCTTCCTGGAAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGTTGATGCCGACATGCCAGCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701833" ref_strand="+" ref_description="SGN-E701833 [FA17AC08]">
      <seq>gttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34303" stop="32835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34003" g_stop="33135" g_length="869"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="869" r_length="869" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E701833" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34003" e_stop="33135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCC</genome_strand>
        <mrna_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709463" ref_strand="+" ref_description="SGN-E709463 [FA52AE05]">
      <seq>ccaataaagctccagcttggaatccatgaggattctcagaacccgtcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgaggaaagcggagatgctgatgctgacatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34239" stop="32836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33940" g_stop="33136" g_length="805"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="805" r_length="805" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E709463" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33940" e_stop="33136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGC</genome_strand>
        <mrna_strand>CCAATAAAGCTCCAGCTTGGAATCCATGAGGATTCTCAGAACCCGTCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737148" ref_strand="-" ref_description="SGN-E737148 [LC08CF04]">
      <seq>catgtcagcatcagcatctccgctttcttcatcaatgctcaaaccgagtttcaacatcctgtgaattttgttgccaaaggtgtttggctcctcgaggctgaaacctgaggtgagaagggcagtctcaaaaagcaagagaaccaagtccttcacagacttgtcattcttgtctgcatcagccctcttccttagctcatccatgatggagttctctgggttgatctccatggtcttcttgctagacatgtatccagccatgctggagtccctaagtgcctgtgccttcataattctctccatgttagcagtccagccatactcaccagtgaccaaacagcagggagagtcaacaaaaaggtcatccttcatcaccttacacagtccctcaaacttctccttcaattcttcctgctttttcttctcatcttcactctcatcaagcttgaggccttccttggtagcagaaacaagctttttgccctcaaattccttcagctgaccaattgaatactcatcaatggcatcaaccatgtaaagcacctcatatcccttcttcttcagtttctccaggaagggagagttctcaacagccttcttgctctcaccagtaatgtagtaaatatcattctggccctccttcattctggtcacatagtccttcaagctggtcatctcatcaccactcttagtggagtggtacctcagcagttcagcaaactttgccctgttctgagaatcctcatggattccaagcttgaggtttttagagaacgcctcatagaacttattgtagtcctccttgttctcagcaatttcaaagaaaagctcaacacacttcttcaccaaattcttgcgaataacctttaggatcttgttctgctgcaatgtctctctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="32837" stop="34368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33137" g_stop="33493" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33494" i_stop="33529" i_length="36">
            <donor d_prob="0.656" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33530" g_stop="34068" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="896" r_length="539" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E737148" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>896</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737148" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33137" e_stop="33493"/>
          <exon e_start="33530" e_stop="34068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCTCTGG</genome_strand>
        <mrna_strand>CATGTCAGCATCAGCATCTCCGCTTTCTTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTTTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAAAAAG....................................GTCATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCTCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E402086" ref_strand="+" ref_description="SGN-E402086 [PPC-6-E24]">
      <seq>ttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatgangaaaacggagatgttgatgccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34224" stop="32842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33924" g_stop="33142" g_length="783"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E402086" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33924" e_stop="33142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTG</genome_strand>
        <mrna_strand>TTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGANGAAAACGGAGATGTTGATGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603289" ref_strand="+" ref_description="SGN-E603289 [56375]">
      <seq>gtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaacctcaggtttcagccttgaggagccaaacaccttgtggccaacagaattcacacgatgctgaaaactcggtttgagcattgatgaggaaaagcgggcgaattgttgatggccgaacatgcccagcattggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34190" stop="32856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33890" g_stop="33160" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E603289" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33890" e_stop="33160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTT-TGG-CAACAGAATTCACAGGATGTTG-AAACTCGGTTTGAGCATTGATGAGGAAA</genome_strand>
        <mrna_strand>GTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTAACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTGTGGCCAACAGAATTCACACGATGCTGAAAACTCGGTTTGAGCATTGATGAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247930" ref_strand="+" ref_description="SGN-E247930 [cLEF-47-B24]">
      <seq>ttgtttctgctaccaaggaaggcctcaagcttgatgagggtgaatatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttatggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33942" stop="32866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33642" g_stop="33166" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E247930" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33642" e_stop="33166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATG</genome_strand>
        <mrna_strand>TTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGGGTGAATATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTATGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278846" ref_strand="+" ref_description="SGN-E278846 [cLER-2-F14]">
      <seq>ttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33942" stop="32866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33642" g_stop="33166" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E278846" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33642" e_stop="33166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATG</genome_strand>
        <mrna_strand>TTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477491" ref_strand="+" ref_description="SGN-E477491 [cSTB-48-I6]">
      <seq>ctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggtttgagcattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34050" stop="32867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33750" g_stop="33167" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E477491" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33750" e_stop="33167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGAT</genome_strand>
        <mrna_strand>CTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561989" ref_strand="+" ref_description="SGN-E561989 [17127]">
      <seq>ttgatgccattgatgagtactccattggtcagctgaaggaatatgagggcaaaaagcttgtttctgctaccaagggaaggctcaagcttgatgagagtgaagatgaaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttaggactctacatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgccttctaacctcaggtttcagccttgaggaggcaaacacctttgggacagaattcacaggatgctgaaactcggtttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33999" stop="32874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33699" g_stop="33174" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E561989" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33699" e_stop="33174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAG</genome_strand>
        <mrna_strand>TTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATATGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGGAAGGCTCAAGCTTGATGAGAGTGAAGATGA-AAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTA-GGACTCTA-CATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTG-CCTTCTAACCTCAGGTTTCAGCCTTGAGGAGGCAAACACCTTTGG-GACAGAATTCACAGGATGCTGAAACTCGGTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708753" ref_strand="+" ref_description="SGN-E708753 [FA36CG01]">
      <seq>ctctacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaaatgacagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaggagccaaacacctttggcaacagaattcacaggatgttgaaactcggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34378" stop="32877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34078" g_stop="33177" g_length="902"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="902" r_length="902" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E708753" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>902</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34078" e_stop="33177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAG-AATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTT</genome_strand>
        <mrna_strand>CTCTACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAAATGAC-AGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575841" ref_strand="+" ref_description="SGN-E575841 [35528]">
      <seq>aactgctgagtgtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcaggacaagaatgacaagtctgtgaaggacttgggttctcttgcttattcgagacttgccttctaacctcaggtttccagcctctgaggagccaaacagctttggcaaccggaattcacaggatgctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34182" stop="32886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33882" g_stop="33186" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575841" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33882" e_stop="33186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGCTGAG-GTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCA-GACAAGAATGACAAGTCTGTGAAGGACTT-GGTTCTCTTGCTT-TTTGAGACTGCCCTTCTCACCTCAGGTTT-CAGCCTC-GAGGAGCCAAACACCTTTGGCAA-CAGAATTCACAGGATGTTGAA</genome_strand>
        <mrna_strand>AACTGCTGAGTGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGGACAAGAATGACAAGTCTGTGAAGGACTTGGGTTCTCTTGCTTATTCGAGACTTGCCTTCTAACCTCAGGTTTCCAGCCTCTGAGGAGCCAAACAGCTTTGGCAACCGGAATTCACAGGATGCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343711" ref_strand="+" ref_description="SGN-E343711 [cTOF-20-J19]">
      <seq>atccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctaccctcaggtttcagcctcgaggagccaaacacctttggcaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34219" stop="32904"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33919" g_stop="33204" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343711" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343711" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33919" e_stop="33204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAG</genome_strand>
        <mrna_strand>ATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTACCCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706239" ref_strand="+" ref_description="SGN-E706239 [FA29BF07]">
      <seq>ctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagcctcgaaggagccaacacctttggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34378" stop="32908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34078" g_stop="33208" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="871" r_length="871" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E706239" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34078" e_stop="33208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCG-AGGAGCCAAACACCTTTGGCA</genome_strand>
        <mrna_strand>CTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAAGGAGCC-AACACCTTTGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409883" ref_strand="+" ref_description="SGN-E409883 [PPI-15-G24]">
      <seq>agactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagccttgaggagccaaacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34129" stop="32913"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33830" g_stop="33213" g_length="618"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="618" r_length="618" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E409883" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33830" e_stop="33213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTT</genome_strand>
        <mrna_strand>AGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTTGAGGAGCCAAACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553708" ref_strand="+" ref_description="SGN-E553708 [cTSC-1-P20]">
      <seq>gttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34303" stop="32933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34003" g_stop="33233" g_length="771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="771" r_length="771" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E553708" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34003" e_stop="33233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</genome_strand>
        <mrna_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347981" ref_strand="+" ref_description="SGN-E347981 [cTOF-31-L10]">
      <seq>gtgtaagttgctgaaggctgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33851" stop="32933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33551" g_stop="33233" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E347981" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33551" e_stop="33233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</genome_strand>
        <mrna_strand>GTGTAAGTTGCTGAAGGCTGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308512" ref_strand="+" ref_description="SGN-E308512 [cLEY-21-F21]">
      <seq>tgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33831" stop="32933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33531" g_stop="33233" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E308512" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33531" e_stop="33233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</genome_strand>
        <mrna_strand>TGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224511" ref_strand="+" ref_description="SGN-E224511 [cLEL-27-B21](-)">
      <seq>actgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacctggctctcttgctttttgagactgcccttctaaaaatcaggtttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34034" stop="32947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33734" g_stop="33234" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E224511" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33734" e_stop="33234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCT-CACCTCAGGTTTCAG</genome_strand>
        <mrna_strand>ACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACCTGGCTCTCTTGCTTTTTGAGACTGCCCTTCTAAAAATCAGGTTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237234" ref_strand="+" ref_description="SGN-E237234 [cLEL-7-P6](-)">
      <seq>gagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattggtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggacatgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgagactgcccttctcacctcaggtttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33905" stop="32934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33605" g_stop="33234" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E237234" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33605" e_stop="33234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATT-GTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGAC-TGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAG</genome_strand>
        <mrna_strand>GAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACATGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220355" ref_strand="+" ref_description="SGN-E220355 [cLEL-12-L1](-)">
      <seq>aagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaagaactctggttctcttgctttttgagactgcccttaaaaacacaggtttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33886" stop="32951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33586" g_stop="33234" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E220355" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33586" e_stop="33234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACT-TGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAG</genome_strand>
        <mrna_strand>AAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGAACTCTGGTTCTCTTGCTTTTTGAGACTGCCCTTAAAAACACAGGTTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E563052" ref_strand="+" ref_description="SGN-E563052 [1388]">
      <seq>atttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaagggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcacgacaagaatgacaagtctgtgaaggacttggttctcttggctttttgagactggccttctaacctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34093" stop="32942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33793" g_stop="33242" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="555" r_length="555" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E563052" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E563052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33793" e_stop="33242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAA-GGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCA-GACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTT-GCTTTTTGAGACTGCCCTTCTCACCTCA</genome_strand>
        <mrna_strand>ATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCACGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGGCTTTTTGAGACTGGCCTTCTAACCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573776" ref_strand="+" ref_description="SGN-E573776 [33140]">
      <seq>ctctcccttcctggagaaactgaagaagaaggggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgcttttttgagaccgcccttctaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34052" stop="32944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33752" g_stop="33244" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E573776" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33752" e_stop="33244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCCTTCCTGGAGAAACTGAAGAAGAA-GGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGC-TTTTTGAGACTGCCCTTCTCACCT</genome_strand>
        <mrna_strand>CTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTTGAGACCGCCCTTCTAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582589" ref_strand="+" ref_description="SGN-E582589 [8222]">
      <seq>ctacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaacgggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaaggagggctgatgcagacaagaatgaccagtctgtgaaagactggttctcttgctttttgagacctggccttctaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34088" stop="32946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33788" g_stop="33246" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E582589" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33788" e_stop="33246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAA-GGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAA-GAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGA-CTGCCCTTCTCAC</genome_strand>
        <mrna_strand>CTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAACGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGGAGGGCTGATGCAGACAAGAATGACCAGTCTGTGAAAGAC-TGGTTCTCTTGCTTTTTGAGACCTGGCCTTCTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E563873" ref_strand="+" ref_description="SGN-E563873 [2314]">
      <seq>tcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaagccagagaactccatcatggatgaagctgaggaaagaangggctgatgcagacaagaatgaccagtctgtgaaaggacttggttctcttgcttttttgaagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34194" stop="32957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33895" g_stop="33257" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E563873" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E563873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33895" e_stop="33257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGA-GCTAAGG-AAG-A-GGGCTGATGCAGACAAGAATGACAAGTCTGTG-AAGGACTTGGTTCTCTTGC-TTTTTG-AGACT</genome_strand>
        <mrna_strand>TCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAAGCCAGAGAACTCCATCATGGATGAAGCTGAGGAAAGAANGGGCTGATGCAGACAAGAATGACCAGTCTGTGAAAGGACTTGGTTCTCTTGCTTTTTTGAAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200599" ref_strand="+" ref_description="SGN-E200599 [cLEC-9-G15]">
      <seq>tttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttanggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34008" stop="32960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33708" g_stop="33260" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E200599" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33708" e_stop="33260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAG</genome_strand>
        <mrna_strand>TTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTANGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569143" ref_strand="+" ref_description="SGN-E569143 [13536]">
      <seq>ctgaactgctgaggtacattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34185" stop="32963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33885" g_stop="33262" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E569143" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33885" e_stop="33262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCT-AAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTG</genome_strand>
        <mrna_strand>CTGAACTGCTGAGGTA-CATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268183" ref_strand="+" ref_description="SGN-E268183 [cLEI-15-N9]">
      <seq>ctggtgatagcaagaatgttgttgagaactctcccttcctggagaaacggaagaataagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttatggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggacttggttctcttgctttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34080" stop="32962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33780" g_stop="33262" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268183" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33780" e_stop="33262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTG</genome_strand>
        <mrna_strand>CTGGTGATAGCAAGAATGTTGTTGAGAACTCTCCCTTCCTGGAGAAACGGAAGAATAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTATGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737974" ref_strand="+" ref_description="SGN-E737974 [LC11DE11]">
      <seq>acaagatcctaaaggttattctgctgcaatgtctctctggagatgttgagaggaaggtcctcagaatccacagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcaaacaagaatgacaagtctgtgaaggacttggttctcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34378" stop="32968"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34072" g_stop="33268" g_length="805"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="870" r_length="805" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E737974" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34072" e_stop="33268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGC</genome_strand>
        <mrna_strand>ATCCACAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAAACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561378" ref_strand="+" ref_description="SGN-E561378 [17361]">
      <seq>caggtcaaagttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacagtctgtgaaggacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34199" stop="32978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33899" g_stop="33278" g_length="622"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E561378" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33899" e_stop="33278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTG</genome_strand>
        <mrna_strand>CAGGTCAAAG-TTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGAC-AGTCTGTGAAGGACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708601" ref_strand="+" ref_description="SGN-E708601 [FA36AH03]">
      <seq>ccatagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtctgtgaaggactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34368" stop="32979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34068" g_stop="33973" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33972" i_stop="33916" i_length="57">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33915" g_stop="33279" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="733" r_length="637" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E708601" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34068" e_stop="33973"/>
          <exon e_start="33915" e_stop="33279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTT</genome_strand>
        <mrna_strand>CCATAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACA.........................................................ATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603898" ref_strand="+" ref_description="SGN-E603898 [67087]">
      <seq>cttagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaaccagagaactccatcatggatgagctgaggaagagggctgattgcagacacaagaatggaccagtctgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34281" stop="32986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33981" g_stop="33286" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="699" r_length="699" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E603898" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33981" e_stop="33286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGA-TGCAG--ACAAGAAT-GACAAGTCTGTGA</genome_strand>
        <mrna_strand>CTTAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAA-CCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATTGCAGACACAAGAATGGACCAGTCTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558456" ref_strand="+" ref_description="SGN-E558456 [17800]">
      <seq>ctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcagacaagaatgacaagtctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34239" stop="32987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33939" g_stop="33287" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E558456" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33939" e_stop="33287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTG</genome_strand>
        <mrna_strand>CTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268742" ref_strand="+" ref_description="SGN-E268742 [cLEM-16-H18]">
      <seq>gaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgcagacaagaatgacaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34116" stop="32991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33816" g_stop="33291" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268742" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33816" e_stop="33291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTC</genome_strand>
        <mrna_strand>GAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590521" ref_strand="+" ref_description="SGN-E590521 [44119]">
      <seq>ctctcctgctgtgtggtgactggtgagtatggctggaccgctaacatggagagaatcatgaagcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatgcaacaagaatgacaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33782" stop="32991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33482" g_stop="33291" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E590521" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33482" e_stop="33291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTC</genome_strand>
        <mrna_strand>CTCTC-CTGCTGTGTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAA-GCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATGCA-ACAAGAATGACAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358844" ref_strand="+" ref_description="SGN-E358844 [cLHT-24-J8]">
      <seq>tgctgaactgctgagatatcactccaccaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatggttgatgctattgatgagtattcaattggtcaattgaaggaatttgagggtaagaagcttgtttctgctaccaaggaaggcctcaagcttgaggagactgaagatgagaagaaaaagcaagaagaactaaaggagaagtttgagggtctgtgcaaggtgattaaggatgttctaggtgacaaggttgagaaagtggtggtctctgaccgtgtagtggattctccttgctgcttggttactggagaatatggttggactgccaacatggagagaatcatgaaggcacaagctctcagggactctagcatggctggatacatgtctagcaagaagaccatggagattaatcctgagaatgccatcatggatgagctcaggaagagagctgatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34187" stop="33006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33887" g_stop="33306" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E358844" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33887" e_stop="33306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGA</genome_strand>
        <mrna_strand>TGCTGAACTGCTGAGATATCACTCCACCAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAGGAGACTGAAGATGAGAAGAAAAAGCAAGAAGAACTAAAGGAGAAGTTTGAGGGTCTGTGCAAGGTGATTAAGGATGTTCTAGGTGACAAGGTTGAGAAAGTGGTGGTCTCTGACCGTGTAGTGGATTCTCCTTGCTGCTTGGTTACTGGAGAATATGGTTGGACTGCCAACATGGAGAGAATCATGAAGGCACAAGCTCTCAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATTAATCCTGAGAATGCCATCATGGATGAGCTCAGGAAGAGAGCTGATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343182" ref_strand="+" ref_description="SGN-E343182 [cTOF-17-J21]">
      <seq>agagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaaatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagacatggnagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34364" stop="33009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34064" g_stop="33309" g_length="756"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="755" r_length="755" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343182" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34064" e_stop="33309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</genome_strand>
        <mrna_strand>AGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAA-ATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACATGGNAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339840" ref_strand="+" ref_description="SGN-E339840 [cTOF-3-G21]">
      <seq>cagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34351" stop="33009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34051" g_stop="33309" g_length="743"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="743" r_length="743" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E339840" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34051" e_stop="33309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</genome_strand>
        <mrna_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480553" ref_strand="+" ref_description="SGN-E480553 [cSTD-14-I16]">
      <seq>tgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttanggactctagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctgangaagagggctgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34289" stop="33009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33989" g_stop="33309" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E480553" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33989" e_stop="33309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</genome_strand>
        <mrna_strand>TGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTANGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGANGAAGAGGGCTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213894" ref_strand="+" ref_description="SGN-E213894 [cLEC-76-J20]">
      <seq>tctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatncacccagagaactccatcatggatgagctaangaaagaggctgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34254" stop="33009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33954" g_stop="33309" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E213894" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33954" e_stop="33309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGC</genome_strand>
        <mrna_strand>TCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATNCACCCAGAGAACTCCATCATGGATGAGCTAANGAAAGAGGCTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370876" ref_strand="+" ref_description="SGN-E370876 [TUS-27-N19]">
      <seq>ttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34255" stop="33010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33955" g_stop="33310" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E370876" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33955" e_stop="33310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATG</genome_strand>
        <mrna_strand>TTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228459" ref_strand="+" ref_description="SGN-E228459 [cLED-3-O19]">
      <seq>cagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34118" stop="33010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33818" g_stop="33310" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E228459" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228459" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33818" e_stop="33310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATG</genome_strand>
        <mrna_strand>CAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558040" ref_strand="+" ref_description="SGN-E558040 [16934]">
      <seq>cttgatgagagtgaagatgagaagaaaaagccggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtattgctgggacgctaacatggagagaatcatgaaggcccaggcacttatggactctagcatggctggatacatgtctagcaagaagaccctggagatcaacccagagaactccatcatggatgagctgaggaagagggctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33913" stop="33010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33613" g_stop="33310" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E558040" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33613" e_stop="33310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATG</genome_strand>
        <mrna_strand>CTTGATGAGAGTGAAGATGAGAAGAAAAAGCCGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATTGCTGGGACGCTAACATGGAGAGAATCATGAAGGCCCAGGCACTTATGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCCTGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTGAGGAAGAGGGCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228484" ref_strand="+" ref_description="SGN-E228484 [cLED-3-H23]">
      <seq>cagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatgagctaaggaagagggctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34118" stop="33011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33818" g_stop="33311" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E228484" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33818" e_stop="33311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGAT</genome_strand>
        <mrna_strand>CAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203697" ref_strand="+" ref_description="SGN-E203697 [cLEC-15-D16]">
      <seq>atgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaaaaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34114" stop="33030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33814" g_stop="33330" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E203697" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33814" e_stop="33330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGA</genome_strand>
        <mrna_strand>ATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAAAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707540" ref_strand="+" ref_description="SGN-E707540 [FA33BC02]">
      <seq>cgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34471" stop="33031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34172" g_stop="33331" g_length="842"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="842" r_length="842" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E707540" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34172" e_stop="33331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</genome_strand>
        <mrna_strand>CGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323325" ref_strand="+" ref_description="SGN-E323325 [cTOC-10-C13]">
      <seq>ttgagaactctcccttcctggagaaactggggaanaangatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34059" stop="33031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33759" g_stop="33331" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323325" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33759" e_stop="33331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</genome_strand>
        <mrna_strand>TTGAGAACTCTCCCTTCCTGGAGAAACTGGGGAANAA-NGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323808" ref_strand="+" ref_description="SGN-E323808 [cTOC-5-L6]">
      <seq>gatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaangcacangcacttanggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34020" stop="33031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33720" g_stop="33331" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="390" r_length="390" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323808" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33720" e_stop="33331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</genome_strand>
        <mrna_strand>GATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAANGCACANGCACTTANGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579649" ref_strand="+" ref_description="SGN-E579649 [86780]">
      <seq>gataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagaagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatgggttggatacatgtctagcaagaagaccatggagattcaacccagagaactccatcttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34450" stop="33032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34150" g_stop="33332" g_length="819"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="822" r_length="822" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E579649" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34150" e_stop="33332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAG-AGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCAT-GGCTGGATACATGTCTAGCAAGAAGACCATGGAGA-TCAACCCAGAGAACTCCATCATGGAT</genome_strand>
        <mrna_strand>GATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGGTTGGATACATGTCTAGCAAGAAGACCATGGAGATTCAACCCAGAGAACTCCATCTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561055" ref_strand="+" ref_description="SGN-E561055 [20806]">
      <seq>gttgagcttttctttgaaattgctgagaacaagggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctacatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatcatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34303" stop="33033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34003" g_stop="33333" g_length="671"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="671" r_length="671" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E561055" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34003" e_stop="33333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGG-AGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGA</genome_strand>
        <mrna_strand>GTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTA-CATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572907" ref_strand="+" ref_description="SGN-E572907 [32135]">
      <seq>ctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggtggatacatgtctagcaagaagaccatggagatcaacccagagaaactccatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34292" stop="33036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33992" g_stop="33336" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="657" r_length="657" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E572907" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33992" e_stop="33336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAG-AACTCCATCAT</genome_strand>
        <mrna_strand>CTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGG-TGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAAACTCCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562464" ref_strand="+" ref_description="SGN-E562464 [904]">
      <seq>aaaaactcaagcttggaatccatgagattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaagggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctagagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactgggtgagtatggctggaccgctaacatgggagagaatcatgaaggcacaggcacttaggactctacatggctggataatgtctacaagaagacatggagatcaacccagagaactccatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34237" stop="33036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33936" g_stop="33336" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E562464" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33936" e_stop="33336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAA-GGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACT-GGTGAGTATGGCTGGACTGCTAACAT-GGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCAT</genome_strand>
        <mrna_strand>AAAAACTCAAGCTTGGAATCCATGA-GATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTA-GAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGGTGAGTATGGCTGGACCGCTAACATGGGAGAGAATCATGAAGGCACAGGCACTTA-GGACTCTA-CATGGCTGGATA-ATGTCTA-CAAGAAGA-CATGGAGATCAACCCAGAGAACTCCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238309" ref_strand="+" ref_description="SGN-E238309 [cLED-17-G13]">
      <seq>aaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaagaagaccatggagatcaacccagagaactccatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34036" stop="33037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33736" g_stop="33337" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E238309" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33736" e_stop="33337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCA</genome_strand>
        <mrna_strand>AAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700065" ref_strand="+" ref_description="SGN-E700065 [FA12AB03]">
      <seq>gataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacctgtctagcaagaagaccatggagatccacccagagaactccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34450" stop="33039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34150" g_stop="33339" g_length="812"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="812" r_length="812" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E700065" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34150" e_stop="33339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCAT</genome_strand>
        <mrna_strand>GATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACCTGTCTAGCAAGAAGACCATGGAGATCCACCCAGAGAACTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584593" ref_strand="+" ref_description="SGN-E584593 [10420]">
      <seq>tggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaacgcacaggcacttagggactctagcatggctggatacatgtctaggcaagaagaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34154" stop="33062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33854" g_stop="33362" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584593" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33854" e_stop="33362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTA-GCAAGAAGACCATG</genome_strand>
        <mrna_strand>TGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAACGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGGCAAGAAGAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580043" ref_strand="+" ref_description="SGN-E580043 [5286]">
      <seq>gagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattggtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatgtctagcaagaagaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33907" stop="33063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33607" g_stop="33363" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E580043" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33607" e_stop="33363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATT-GTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCAT</genome_strand>
        <mrna_strand>GAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479663" ref_strand="+" ref_description="SGN-E479663 [cSTD-10-J16]">
      <seq>caagggtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttatggactctagcatggctggatacatgtctagcaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34159" stop="33068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33860" g_stop="33368" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E479663" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33860" e_stop="33368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAG</genome_strand>
        <mrna_strand>CAAGGGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTATGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479987" ref_strand="+" ref_description="SGN-E479987 [cSTD-12-I17]">
      <seq>gtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttanggactctagcatggctggatacatgtctagcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34399" stop="33070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34099" g_stop="33370" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E479987" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34099" e_stop="33370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAG-AATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGA</genome_strand>
        <mrna_strand>GTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTANGGACTCTAGCATGGCTGGATACATGTCTAGCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271808" ref_strand="+" ref_description="SGN-E271808 [cLEM-8-E10]">
      <seq>ggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaagaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacagggcacttaggactccagcatggctggatacatgtctagcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34271" stop="33070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33971" g_stop="33370" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="602" r_length="602" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E271808" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33971" e_stop="33370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACA-GGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGA</genome_strand>
        <mrna_strand>GGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAAGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGGCACTTA-GGACTCCAGCATGGCTGGATACATGTCTAGCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206739" ref_strand="+" ref_description="SGN-E206739 [cLEC-31-B15]">
      <seq>tgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctagcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34113" stop="33070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33813" g_stop="33370" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E206739" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33813" e_stop="33370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGA</genome_strand>
        <mrna_strand>TGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202660" ref_strand="+" ref_description="SGN-E202660 [cLEC-19-H7]">
      <seq>taagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatgaaggcacaggcacttagggactccagcatggctggatacatgtctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34160" stop="33075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33860" g_stop="33375" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E202660" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33860" e_stop="33375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAG</genome_strand>
        <mrna_strand>TAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451868" ref_strand="+" ref_description="SGN-E451868 [cSTS-14-O16]">
      <seq>caacatctccagagagtccttgcagcagaacaagacgcctaaaggttacttcgcaagactttggtgaagatgtgtgttgagccttttctttgaaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaaggattctcagaaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagaagtggtgatgagatgaaccagcttgaaagaactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagaagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaangatgtgctaggagacaaagttgaaaaggttattgtttctgaaccgtgttgtggactctccctgctggtttggtgactgggtgagtatggctggacccgctacatggagaagatcatgaaggcacaggcaccttaggactctagcatggctggatacatgtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34340" stop="33076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34076" g_stop="33376" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E451868" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34076" e_stop="33376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATCTCCAGAGAGACATTGCAGCAGAACAAGA-TCCTAAAGGTTA-TTCGCAAGAATTTGGTGAAGAAGTGTGTTGAG-CTTTTCTTTG-AAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATG-AGGATTCTCAG-AACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAG-AGTGGTGATGAGATG-ACCAGCTTG-AAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAG-AGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTG-ACCGTGTTGTTGACTCTCCCTGCT-GTTTGGTCACT-GGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTA</genome_strand>
        <mrna_strand>CAACATCTCCAGAGAGTCCTTGCAGCAGAACAAGACGCCTAAAGGTTACTTCGCAAGACTTTGGTGAAGATGTGTGTTGAGCCTTTTCTTTGAAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAAGGATTCTCAGAAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAAGTGGTGATGAGATGAACCAGCTTGAAAGAACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAANGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGAACCGTGTTGTGGACTCTCCCTGCTGGTTTGGTGACTGGGTGAGTATGGCTGGACCCGCTACATGGAGAAGATCATGAAGGCACAGGCACCTTAGGACTCTAGCATGGCTGGATACATGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483593" ref_strand="+" ref_description="SGN-E483593 [cSTE-10-G23]">
      <seq>agatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctagcatggctggatacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34344" stop="33080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34044" g_stop="33380" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E483593" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34044" e_stop="33380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATG</genome_strand>
        <mrna_strand>AGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAGCATGGCTGGATACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601700" ref_strand="+" ref_description="SGN-E601700 [54744]">
      <seq>aggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaacaaggttattgtttctgaccgtgttgtggactctccctgctgttttggtgactggtgagtatggctggaccgctaacatggagagaatcatgaaggcacaggcacttagggactctaacatggctggataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34335" stop="33082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34035" g_stop="33382" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E601700" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34035" e_stop="33382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAA-AAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTG-TTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACA</genome_strand>
        <mrna_strand>AGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAACAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATGAAGGCACAGGCACTTAGGGACTCTAACATGGCTGGATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456972" ref_strand="+" ref_description="SGN-E456972 [cPRO-2-A13]">
      <seq>gtggattctgaggaccttcctctcgacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcataacaggtcaaagtttgctgaactgctgaggtaccattccaccaagaatggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaatgcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctagttggtgactggtgagtatggctggaccgcttacatggagagaatcatgaacgcacaggcacttatggactctagcatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34399" stop="33090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34099" g_stop="33390" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="710" r_length="710" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456972" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34099" e_stop="33390"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGC</genome_strand>
        <mrna_strand>GTGGATTCTGAGGACCTTCCTCTCGACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCATAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAATGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAATGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTAGTTGGTGACTGGTGAGTATGGCTGGACCGCTTACATGGAGAGAATCATGAACGCACAGGCACTTATGGACTCTAGCATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405006" ref_strand="+" ref_description="SGN-E405006 [PPC-16-K7]">
      <seq>agccagaatgatatttactacattactggtgagagcaagaaagctgttgagaactctcccttcctggagaaactgaagaagaaaggatacgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaagaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaagatgtgctaagagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgcttacatggagagaatcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34104" stop="33121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33805" g_stop="33421" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E405006" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33805" e_stop="33421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGA</genome_strand>
        <mrna_strand>AGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAAGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAAGGATACGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAAGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAAGATGTGCTAAGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTTACATGGAGAGAATCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301089" ref_strand="+" ref_description="SGN-E301089 [cLEW-22-H4]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="33122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34868" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="363" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34867" i_stop="33626" i_length="1242">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33625" g_stop="33422" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="567" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301089" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34868"/>
          <exon e_start="33625" e_stop="33422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448722" ref_strand="+" ref_description="SGN-E448722 [cSTS-4-C18]">
      <seq>ggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctncctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34397" stop="33122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34097" g_stop="33422" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="676" r_length="676" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448722" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34097" e_stop="33422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATG</genome_strand>
        <mrna_strand>GGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTNCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347269" ref_strand="+" ref_description="SGN-E347269 [cTOF-25-F18]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcacgaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgagttgatgactctccctgctgtttggtcactggtgagtatggctggactggctacatggagagaattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="33123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34894" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="331" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34893" i_stop="33739" i_length="1155">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33738" g_stop="33423" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="647" r_length="316" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E347269" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34894"/>
          <exon e_start="33738" e_stop="33423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTAT</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCACGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGAGTTGATGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGGCTACATGGAGAGAATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436804" ref_strand="+" ref_description="SGN-E436804 [cSTA-1-M11]">
      <seq>ggaccttcctctcaacatctccagagagacattgcagcagaataagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctactaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggaccgctaacatggagagaatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34388" stop="33123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34088" g_stop="33423" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E436804" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34088" e_stop="33423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTAT</genome_strand>
        <mrna_strand>GGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAATAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACTAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCGCTAACATGGAGAGAATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253262" ref_strand="+" ref_description="SGN-E253262 [cLEG-26-O15]">
      <seq>aacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggagagaattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34234" stop="33123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33934" g_stop="33423" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E253262" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33934" e_stop="33423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTAT</genome_strand>
        <mrna_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E563371" ref_strand="+" ref_description="SGN-E563371 [1812]">
      <seq>gaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctagagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctggacccgtaacatggagagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34313" stop="33144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34013" g_stop="33426" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E563371" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E563371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34013" e_stop="33426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTAC-AATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAAT</genome_strand>
        <mrna_strand>GAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTA-GAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGACCCGTAACATGGAGAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301090" ref_strand="+" ref_description="SGN-E301090 [cLEW-22-H6]">
      <seq>tttgtgttccatttcgtcttacagctttcttcatctcgggggatctgcaaaaaaatgtcggacgtagagacctttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttgtacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="33131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34868" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="363" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34867" i_stop="33626" i_length="1242">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33625" g_stop="33431" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="558" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301090" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34868"/>
          <exon e_start="33625" e_stop="33431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGTCTTACAGCTTTCTTCATCTCGGGGGATCTGCAAAAAAATGTCGGACGTAGAGACCTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTGTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328117" ref_strand="+" ref_description="SGN-E328117 [cTOC-22-D14]">
      <seq>cagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34351" stop="33133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34051" g_stop="33433" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="619" r_length="619" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E328117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34051" e_stop="33433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGG</genome_strand>
        <mrna_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200600" ref_strand="+" ref_description="SGN-E200600 [cLEC-9-G17]">
      <seq>tttacatggtcgatgccattgatgagtattcaattggtcagctgaaggaatacgagggcaaaaagcttgtttctgctaccaaggaacgcctcacgcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaatgatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttcactctccctgctgcttggtcactggtgagtgtggctggactgctaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34008" stop="33134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33708" g_stop="33434" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E200600" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33708" e_stop="33434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATG</genome_strand>
        <mrna_strand>TTTACATGGTCGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATACGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAACGCCTCACGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAATGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTCACTCTCCCTGCTGCTTGGTCACTGGTGAGTGTGGCTGGACTGCTAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702253" ref_strand="+" ref_description="SGN-E702253 [FA18AH04]">
      <seq>gcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34620" stop="33135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34320" g_stop="33435" g_length="886"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="886" r_length="886" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E702253" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34320" e_stop="33435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACAT</genome_strand>
        <mrna_strand>GCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268076" ref_strand="+" ref_description="SGN-E268076 [cLEI-15-J20]">
      <seq>tgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaaaggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgctaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34304" stop="33135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34004" g_stop="33435" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268076" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34004" e_stop="33435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACAT</genome_strand>
        <mrna_strand>TGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAAGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328941" ref_strand="+" ref_description="SGN-E328941 [cTOC-24-F4]">
      <seq>gaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctacgagacaaaagttgaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagtatggctggactgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34387" stop="33139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34087" g_stop="33439" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E328941" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34087" e_stop="33439"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTA</genome_strand>
        <mrna_strand>GACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTACGAGACAAAAGTTGAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575740" ref_strand="+" ref_description="SGN-E575740 [35412]">
      <seq>gagttgattcctgaatatttgagctttgtgaagggtattgtggattcggaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaacggatgtgctaggagacaaagttgaaacaggttattgtttctgaccggtgttgtgggactctccctgctgtttggtgactggtgagtatggctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34438" stop="33145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34138" g_stop="33445" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575740" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34138" e_stop="33445"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAA-GGATGTGCTAGGAGACAAAGTTGAAA-AGGTCATTGTTTCTGACC-GTGTTGT-TGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGA</genome_strand>
        <mrna_strand>GAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCGGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAACGGATGTGCTAGGAGACAAAGTTGAAACAGGTTATTGTTTCTGACCGGTGTTGTGGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486300" ref_strand="+" ref_description="SGN-E486300 [cSTE-21-B22]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33447" g_length="742"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486300" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTG</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456394" ref_strand="+" ref_description="SGN-E456394 [cSTS-29-K18]">
      <seq>caacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34376" stop="33147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34076" g_stop="33447" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456394" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34076" e_stop="33447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTG</genome_strand>
        <mrna_strand>CAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426528" ref_strand="+" ref_description="SGN-E426528 [STM-46-P23]">
      <seq>tattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaagggtattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagtatggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34331" stop="33147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34031" g_stop="33447" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E426528" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34031" e_stop="33447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTG</genome_strand>
        <mrna_strand>TATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGGTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTATGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604234" ref_strand="+" ref_description="SGN-E604234 [74367]">
      <seq>gcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtctctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaacaaagcaggaagaattgaaggaaacatttgagggactgtgtaaggtgatgacggatgtgctaggagacaaagttgacaaggtcatgtatctgaccgtgttgtggactctccctgctgtactggtgactggtgagtatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34352" stop="33170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34052" g_stop="33449" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E604234" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34052" e_stop="33449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAA-AAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGT-TTGGTCACTGGTGAGTATGGC</genome_strand>
        <mrna_strand>GCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTCTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAACAAAGCAGGAAGAATTGAAGGAAACATTTGAGGGACTGTGTAAGGTGATGACGGATGTGCTAGGAGACAAAGTTGACAAGGTCA-TGTATCTGACCGTGTTGTGGACTCTCCCTGCTGTACTGGTGACTGGTGAGTATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E441274" ref_strand="+" ref_description="SGN-E441274 [cSTA-29-J6]">
      <seq>ggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcatgaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtgagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34268" stop="33153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33968" g_stop="33453" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E441274" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33968" e_stop="33453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTA</genome_strand>
        <mrna_strand>GGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCATGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304876" ref_strand="+" ref_description="SGN-E304876 [cLEX-10-A6]">
      <seq>atccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttggtcactggtgagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34219" stop="33153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33919" g_stop="33453" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E304876" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33919" e_stop="33453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTA</genome_strand>
        <mrna_strand>ATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582579" ref_strand="+" ref_description="SGN-E582579 [8212]">
      <seq>agacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaagggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaagttgaaaaaggttattgtttctgaccgtgttgtggactctccctgctgtttggtgactggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34362" stop="33157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34062" g_stop="33457" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E582579" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34062" e_stop="33457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAA-GGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTG</genome_strand>
        <mrna_strand>AGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAGTTGAAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTGACTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701467" ref_strand="+" ref_description="SGN-E701467 [FA16AC05]">
      <seq>ctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaagatgtgctangagaacaagttgaaaaggtcattgtttctgaccgtgttgttgactctcccctgctgttggtcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34635" stop="33160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34335" g_stop="33460" g_length="876"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="876" r_length="876" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E701467" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>876</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34335" e_stop="33460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCT-CCCTGCTGTTTGGTCACTG</genome_strand>
        <mrna_strand>CTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAAGATGTGCTANGAGAACAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCCTGCTG-TTGGTCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326219" ref_strand="+" ref_description="SGN-E326219 [cTOC-16-P15]">
      <seq>cagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaaggtcattgtttctgaccgtgttgttgactctccctgctgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34351" stop="33167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34051" g_stop="33467" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E326219" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34051" e_stop="33467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTG</genome_strand>
        <mrna_strand>CAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399784" ref_strand="+" ref_description="SGN-E399784 [cSTC-2-O2]">
      <seq>ggactacaataagttttacgaggccttctctaaaaacctcatgcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaatagcatgaagaatttgaaggaaaagtttgagggactgtgtaaggtgatgaaagatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttggggactctccctgctgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34268" stop="33168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33968" g_stop="33468" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E399784" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33968" e_stop="33468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAA-TTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTT</genome_strand>
        <mrna_strand>GGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCATGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAATAGCATGAAGAATTTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAAGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGGGGACTCTCCCTGCTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485812" ref_strand="+" ref_description="SGN-E485812 [cSTE-19-L5]">
      <seq>cttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaagcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaanggaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttgtggactctccctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34384" stop="33172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34084" g_stop="33472" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E485812" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34084" e_stop="33472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCT</genome_strand>
        <mrna_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAAGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAANGGAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590257" ref_strand="+" ref_description="SGN-E590257 [43849]">
      <seq>gaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggttattgtttctgaccgtgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34441" stop="33187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34141" g_stop="33487" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E590257" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34141" e_stop="33487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTG</genome_strand>
        <mrna_strand>GAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTTATTGTTTCTGACCGTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201504" ref_strand="+" ref_description="SGN-E201504 [cLEC-4-D21]">
      <seq>tgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaaaggtcattgtttctgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34148" stop="33193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33848" g_stop="33493" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E201504" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33848" e_stop="33493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACC</genome_strand>
        <mrna_strand>TGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486229" ref_strand="+" ref_description="SGN-E486229 [cSTE-21-D11]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctncagcttgatgagagtgaagatgagaagaaaagcaggaagaattgaagggaaaattgagggactgtgtaaggtgatgaaggatgtgctangagacaaagttgaaaagttattgtttctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33494" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="692" r_length="692" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486229" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGAC</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTNCAGCTTGATGAGAGTGAAGATGAGAAG-AAAAGCAGGAAGAATTGAAGG-GAAAATTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTANGAGACAAAGTTGAAAA-GTTATTGTTTCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486164" ref_strand="+" ref_description="SGN-E486164 [cSTE-21-C12]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaatgagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcgaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagatgtagcatgaagaattcgaggaaaaatttgagggactgtgtaaggtgatgaatgatgtgctaagagacaaagctgatcaggttattgtttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33495" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486164" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGA</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAATGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCGAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGATGTAGCATGAAGAATTCGAGGAAAAATTTGAGGGACTGTGTAAGGTGATGAATGATGTGCTAAGAGACAAAGCTGATCAGGTTATTGTTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580271" ref_strand="+" ref_description="SGN-E580271 [5514]">
      <seq>cgagggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacatttactggtgagagcaagaaggctgttgagaactctcccttcctgggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgtggtaaggtgatgaaggatgtgctagggagacaaagttgaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34157" stop="33209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33858" g_stop="33509" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E580271" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580271" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33858" e_stop="33509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACA-TTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCT-GGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGT-GTAAGGTGATGAAGGATGTGCTA-GGAGACAAAGTTGAAAAG</genome_strand>
        <mrna_strand>CGAG-GGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGTGGTAAGGTGATGAAGGATGTGCTAGGGAGACAAAGTTGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451563" ref_strand="+" ref_description="SGN-E451563 [cSTS-13-H15]">
      <seq>ttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaggtgatgaaggatgtgctaggagacaaagttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34470" stop="33211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34170" g_stop="33511" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E451563" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34170" e_stop="33511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAA</genome_strand>
        <mrna_strand>TTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573123" ref_strand="+" ref_description="SGN-E573123 [32384]">
      <seq>cgcaagaatttggtgaagaagtgtgtgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggacaagtttgagggactgtgtaaggtgatgaaggatgtgctacgagaccaaaggtttgcaaaaggttatttgtttctgaccgtgtttgtgggactctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34327" stop="33177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34027" g_stop="33518" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E573123" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34027" e_stop="33518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAA</genome_strand>
        <mrna_strand>CGCAAGAATTTGGTGAAGAAGTGTG-TGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGACAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTACGAGACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465385" ref_strand="+" ref_description="SGN-E465385 [cPRO-20-P14]">
      <seq>gcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtgtaaagtgatgaaagatgtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34352" stop="33228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34052" g_stop="33528" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E465385" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34052" e_stop="33528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCT</genome_strand>
        <mrna_strand>GCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGTAAAGTGATGAAAGATGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700826" ref_strand="+" ref_description="SGN-E700826 [FA14BB03]">
      <seq>cccctatggatgaggaagcccgaggagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgaaggtcagcttgagtttaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccacaaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatggttgatgctattgatgagtattcaattggtcaattgaaggaatttgagggtaagaagcttgtttctgctaccaaggaaggcctcaagcttgaggagactgaagatgagaagaaaaagcaagaagaactaaaggagaagtttgagggtctttgcaaggtgattaaggatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34681" stop="33231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34381" g_stop="33530" g_length="852"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="852" r_length="852" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E700826" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34381" e_stop="33530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTG</genome_strand>
        <mrna_strand>CCCCTATGGATGAGGAAGCCCGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAAGGTCAGCTTGAGTTTAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAGGAGACTGAAGATGAGAAGAAAAAGCAAGAAGAACTAAAGGAGAAGTTTGAGGGTCTTTGCAAGGTGATTAAGGATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703718" ref_strand="+" ref_description="SGN-E703718 [FA22BB03]">
      <seq>gaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaagtgatgaaggatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34668" stop="33230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34368" g_stop="33530" g_length="839"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="839" r_length="839" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703718" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34368" e_stop="33530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTG</genome_strand>
        <mrna_strand>GAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAAGTGATGAAGGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253165" ref_strand="+" ref_description="SGN-E253165 [cLEG-26-O5]">
      <seq>aacctcaagcttggaatccatgaggattctcagaacagggcaaagtttggggaactgctgaggtaccactccactaanagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggagaagtttgagggactgtgtaaagtgatgaaagatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34234" stop="33230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33934" g_stop="33530" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E253165" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33934" e_stop="33530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTG</genome_strand>
        <mrna_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGGGGAACTGCTGAGGTACCACTCCACTAANAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAAGTGATGAAAGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277676" ref_strand="+" ref_description="SGN-E277676 [cLEL-5-C21](-)">
      <seq>accttgcaaagaccctcaaacttctcctttagttcttcttgctttttcttctcatcttcagtctcctcaagcttgaggccttccttggtagcagaaacaagcttcttaccctcaaattccttcaattgaccaattgaatactcatcaatagcatcaaccatgtaaagaacctcataacccttcttcttcagcttctcaaggaagggtgagttctcaacagccttcttgctctcaccagtaatgtagtccatatcattctggccttctttcataatggttacatagtccctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33243" stop="34137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33543" g_stop="33837" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E277676" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>295</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33543" e_stop="33837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGC</genome_strand>
        <mrna_strand>ACCTTGCAAAGACCCTCAAACTTCTCCTTTAGTTCTTCTTGCTTTTTCTTCTCATCTTCAGTCTCCTCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTCTTACCCTCAAATTCCTTCAATTGACCAATTGAATACTCATCAATAGCATCAACCATGTAAAGAACCTCATAACCCTTCTTCTTCAGCTTCTCAAGGAAGGGTGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTCCATATCATTCTGGCCTTCTTTCATAATGGTTACATAGTCCCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448207" ref_strand="+" ref_description="SGN-E448207 [cSTS-2-E8]">
      <seq>gtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattganggaaagtttgagggactgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34399" stop="33248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34099" g_stop="33548" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448207" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34099" e_stop="33548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGT</genome_strand>
        <mrna_strand>GTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGANGGA-AAGTTTGAGGGACTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449047" ref_strand="+" ref_description="SGN-E449047 [cSTS-5-O9]">
      <seq>cccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggactgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34492" stop="33249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34192" g_stop="33549" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E449047" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34192" e_stop="33549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTG</genome_strand>
        <mrna_strand>CCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450845" ref_strand="+" ref_description="SGN-E450845 [cSTS-10-J23]">
      <seq>caagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcangaagaattgaaggaaaagtttgagggactgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34481" stop="33249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34181" g_stop="33549" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E450845" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34181" e_stop="33549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTG</genome_strand>
        <mrna_strand>CAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCANGAAGAATTGAAGGAAAAGTTTGAGGGACTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580121" ref_strand="+" ref_description="SGN-E580121 [5364]">
      <seq>cttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggcagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaaggaaaggcctcaagctttgatgagagtgcaagatgagaagaaaaaagcaggaaagaattgaaggaaaaagttttgaggggactgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34384" stop="33249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34084" g_stop="33549" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E580121" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34084" e_stop="33549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGG-AGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACC-AAGG-AAGGCCTCAAGC-TTGATGAGAGTG-AAGATGAGAAG-AAAAAGCAGG-AAGAATTGAAGG-AGAAG-TTTGA-GGGACTGTG</genome_strand>
        <mrna_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGCAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAAGGAAAGGCCTCAAGCTTTGATGAGAGTGCAAGATGAGAAGAAAAAAGCAGGAAAGAATTGAAGGAAAAAGTTTTGAGGGGACTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E578654" ref_strand="+" ref_description="SGN-E578654 [85774]">
      <seq>attgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34608" stop="33250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34308" g_stop="33550" g_length="759"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="759" r_length="759" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E578654" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34308" e_stop="33550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGT</genome_strand>
        <mrna_strand>ATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574447" ref_strand="+" ref_description="SGN-E574447 [33916]">
      <seq>aggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaagggctcaagcttgatgagagtgaagatgacgaagaaaaagcaggaagaattgaaggaaaagtttgagggactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34440" stop="33250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34140" g_stop="33550" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="592" r_length="592" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E574447" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34140" e_stop="33550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGA-GAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGT</genome_strand>
        <mrna_strand>AGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGGCTCAAGCTTGATGAGAGTGAAGATGACGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453223" ref_strand="+" ref_description="SGN-E453223 [cSTS-19-E14]">
      <seq>aagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattccgaggaccttcccctcaacatctctagagagatgttacagcagaataagatcctgaaggttattcgcaaaaacttggtaaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactatgacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccaccaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggccgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatggttgatgctattgatgagtattcaattggtcaattgaaggaatttgagggtaagaagcttgtttctgctaccaaggaaggcctcaagcttgaggagacctgagatgagaagaaaaagcncgaagaactaaaggagaagtttgagggtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34498" stop="33251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34198" g_stop="33551" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E453223" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34198" e_stop="33551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTG</genome_strand>
        <mrna_strand>AAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATGACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCCGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAGGAGACCTGAGATGAGAAGAAAAAGCNCGAAGAACTAAAGGAGAAGTTTGAGGGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482128" ref_strand="+" ref_description="SGN-E482128 [cSTD-21-C11]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaaatttgagggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33552" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="637" r_length="637" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482128" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACT</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAATTTGAGGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444633" ref_strand="+" ref_description="SGN-E444633 [cSTA-43-L21]">
      <seq>gcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtttgagggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34298" stop="33252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33998" g_stop="33552" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E444633" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33998" e_stop="33552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACT</genome_strand>
        <mrna_strand>GCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTTTGAGGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448957" ref_strand="+" ref_description="SGN-E448957 [cSTS-4-P12]">
      <seq>caaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaagcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattgaaggaaaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34533" stop="33261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34233" g_stop="33561" g_length="673"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448957" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34233" e_stop="33561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTT</genome_strand>
        <mrna_strand>CAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAAGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAAAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401032" ref_strand="+" ref_description="SGN-E401032 [PPC-2-L4]">
      <seq>tgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtggagatgagaagaaaaagcaggaagaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34314" stop="33271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34014" g_stop="33571" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E401032" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34014" e_stop="33571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGA</genome_strand>
        <mrna_strand>TGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGGAGATGAGAAGAAAAAGCAGGAAGAATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487802" ref_strand="+" ref_description="SGN-E487802 [cSTE-26-J23]">
      <seq>ctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattcggaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcttggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaagcaggaagaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34524" stop="33272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34224" g_stop="33572" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E487802" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34224" e_stop="33572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTG</genome_strand>
        <mrna_strand>CTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCGGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCTTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAG-AAAAGCAGGAAGAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330775" ref_strand="+" ref_description="SGN-E330775 [cTOD-8-L4]">
      <seq>ataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaagaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34449" stop="33272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34149" g_stop="33572" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E330775" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34149" e_stop="33572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTG</genome_strand>
        <mrna_strand>ATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576829" ref_strand="+" ref_description="SGN-E576829 [60109]">
      <seq>tgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagttgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaagcaggaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34571" stop="33276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34271" g_stop="33576" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="696" r_length="696" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576829" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34271" e_stop="33576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGA</genome_strand>
        <mrna_strand>TGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253164" ref_strand="+" ref_description="SGN-E253164 [cLEG-26-O3]">
      <seq>aacctcaagcttggaatccatgaggattctcagaacaaggcaaagtttgcggaactgctgaggtaccactccactaanagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaagaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34234" stop="33284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33934" g_stop="33584" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E253164" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33934" e_stop="33584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAG</genome_strand>
        <mrna_strand>AACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAAGGCAAAGTTTGCGGAACTGCTGAGGTACCACTCCACTAANAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344166" ref_strand="+" ref_description="SGN-E344166 [cTOF-16-O20]">
      <seq>tgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34306" stop="33275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34006" g_stop="33585" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="423" polyA_stop="440"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E344166" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34006" e_stop="33585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAA</genome_strand>
        <mrna_strand>TGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437818" ref_strand="+" ref_description="SGN-E437818 [cSTA-5-K19]">
      <seq>aaagaagaagcccaacaatatcaagttgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34502" stop="33290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34202" g_stop="33590" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E437818" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E437818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34202" e_stop="33590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAG</genome_strand>
        <mrna_strand>AAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482190" ref_strand="+" ref_description="SGN-E482190 [cSTD-21-C12]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaagcctncagcttgatgagagtgaagatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33592" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482190" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGA</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAA-GCCTNCAGCTTGATGAGAGTGAAGATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486304" ref_strand="+" ref_description="SGN-E486304 [cSTE-21-D12]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgatgagagtgaagatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33592" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486304" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGA</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486095" ref_strand="+" ref_description="SGN-E486095 [cSTE-21-C11]">
      <seq>acaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgaaggcaaaaagcttgtttctgctaccaaggaaagcctcaagcttgatgagagtgaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33595" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486095" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATG</genome_strand>
        <mrna_strand>ACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAAGGCAAAAAGCTTGTTTCTGCTACCAAGGAAAGCCTCAAGCTTGATGAGAGTGAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456470" ref_strand="+" ref_description="SGN-E456470 [cSTS-29-J23]">
      <seq>ctgtatgttcgccgtgtgtttctcacggactaactgtgaggaagttgattcctgaaatatttgagctttgtgaagggtattgtggattctgaggacccttcctctcaaccatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttganggcaaaaagcttgtttctgctaccaangaangcctcaagcttgatgagagtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34476" stop="33299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34177" g_stop="33599" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456470" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34177" e_stop="33599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTATGTTCGCCGTGTGTTTATCATGGA-TAACTGTGATG-AGTTGATTCCTG-AATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGA-CCTTCCTCTCAA-CATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATG-AGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAA</genome_strand>
        <mrna_strand>CTGTATGTTCGCCGTGTGTTTCTCACGGACTAACTGTGAGGAAGTTGATTCCTGAAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCCTTCCTCTCAACCATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGANGGCAAAAAGCTTGTTTCTGCTACCAANGAANGCCTCAAGCTTGATGAGAGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575190" ref_strand="+" ref_description="SGN-E575190 [34775]">
      <seq>tgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaaggaaggcctcaagctttgatgagagtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34434" stop="33299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34134" g_stop="33599" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E575190" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34134" e_stop="33599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACC-AAGGAAGGCCTCAAGC-TTGATGAGAGTGAA</genome_strand>
        <mrna_strand>TGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAAGGAAGGCCTCAAGCTTTGATGAGAGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620791" ref_strand="+" ref_description="SGN-E620791 [71496]">
      <seq>gaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaggcctcaagcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34183" stop="33308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33883" g_stop="33608" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E620791" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>276</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33883" e_stop="33608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAT</genome_strand>
        <mrna_strand>GAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710340" ref_strand="+" ref_description="SGN-E710340 [FA55AE08]">
      <seq>atgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctaccaaggaaagcctcaagcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34611" stop="33309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34311" g_stop="33609" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E710340" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34311" e_stop="33609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGA</genome_strand>
        <mrna_strand>ATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAAGCCTCAAGCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703766" ref_strand="+" ref_description="SGN-E703766 [FA22BF07]">
      <seq>atttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgagggcaaaaagcttgtttctgctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36625" stop="33330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36325" g_stop="36159" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="309" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34894" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="327" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34893" i_stop="34150" i_length="744">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34149" g_stop="33630" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="847" r_length="520" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703766" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36325" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34894"/>
          <exon e_start="34149" e_stop="33630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTAC</genome_strand>
        <mrna_strand>ATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479354" ref_strand="+" ref_description="SGN-E479354 [cSTD-9-H7]">
      <seq>gttcaacagagaagtgcttcacagcaagatgctcttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgangtactttacatggttgatgccattgatgagtactccattggtcagctgaaggaatttgagggcaaaaagcttgtttctgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34586" stop="33331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34282" g_stop="33631" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="683" r_length="652" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E479354" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34282" e_stop="33631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTA</genome_strand>
        <mrna_strand>CTCTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGANGTACTTTACATGGTTGATGCCATTGATGAGTACTCCATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E598985" ref_strand="+" ref_description="SGN-E598985 [51963]">
      <seq>agagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgtttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccattgatgagtactcaattggtcagctgaaggaatttgagggcaaaaagcttgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34658" stop="33337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34358" g_stop="33637" g_length="722"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="723" r_length="723" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E598985" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34358" e_stop="33637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTG-TTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTT</genome_strand>
        <mrna_strand>AGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E285507" ref_strand="+" ref_description="SGN-E285507 [cLES-10-I1]">
      <seq>tcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccacaaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatggttgatgctattgatgagtattcaattggtcaattgaaggaatttgagggtaagaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34469" stop="33342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34169" g_stop="33642" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E285507" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E285507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34169" e_stop="33642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCT</genome_strand>
        <mrna_strand>TCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204104" ref_strand="+" ref_description="SGN-E204104 [cLEC-27-E1]">
      <seq>agaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaagactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaacgctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctgaaggaatttgacggcaaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34350" stop="33343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34050" g_stop="33643" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E204104" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204104" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34050" e_stop="33643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGC</genome_strand>
        <mrna_strand>AGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAACGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGACGGCAAAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698500" ref_strand="+" ref_description="SGN-E698500 [FA06CC01]">
      <seq>cggttaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtccactgaaggaatttgagggcaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34770" stop="33344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34475" g_stop="33644" g_length="832"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="832" r_length="832" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E698500" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34475" e_stop="33644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAG</genome_strand>
        <mrna_strand>CGGTTAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCCACTGAAGGAATTTGAGGGCAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482249" ref_strand="+" ref_description="SGN-E482249 [cSTD-21-D11]">
      <seq>acaatatcgagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacgttgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaagctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttgatgccgttgatgagtactcaattggtcagctgaaggaatttgagggcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34188" g_stop="33646" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482249" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34188" e_stop="33646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAA</genome_strand>
        <mrna_strand>ACAATATCGAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACGTTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAAGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCGTTGATGAGTACTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591889" ref_strand="+" ref_description="SGN-E591889 [45610]">
      <seq>aaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtactttacatggttggatgccattgatgagtactcaatgggtcagctgaaggaatttgaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34738" stop="33351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34438" g_stop="33651" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="789" r_length="789" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E591889" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34438" e_stop="33651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTT-GATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGG</genome_strand>
        <mrna_strand>AAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGGATGCCATTGATGAGTACTCAATGGGTCAGCTGAAGGAATTTGAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740268" ref_strand="+" ref_description="SGN-E740268 [LC20DA12]">
      <seq>cgataaggaaatctcggatgatgaggacgaagaggagaagaaagatgaggaaggaaaggtagaggaggttgatgaagaaaaggagaaggaagagaagaaaaagaagaaaattaaggaagtctctaatgagtggtcattggttaataagcagaagcccatatggatgaggaagcccgaggagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgaaggtcagcttgagtttaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccacaaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatgggtgatgctattgatgagtattcaattggtcaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34834" stop="33364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34535" g_stop="33664" g_length="872"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="872" r_length="872" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E740268" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>872</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34535" e_stop="33664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGA</genome_strand>
        <mrna_strand>CGATAAGGAAATCTCGGATGATGAGGACGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAAGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTGGTTAATAAGCAGAAGCCCATATGGATGAGGAAGCCCGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAAGGTCAGCTTGAGTTTAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGGTGATGCTATTGATGAGTATTCAATTGGTCAATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453292" ref_strand="+" ref_description="SGN-E453292 [cSTS-19-D23]">
      <seq>ttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgangtactttacatggttgatgccattgatgagtactcaattggtcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34561" stop="33365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34261" g_stop="33665" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E453292" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34261" e_stop="33665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTG</genome_strand>
        <mrna_strand>TTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGANGTACTTTACATGGTTGATGCCATTGATGAGTACTCAATTGGTCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266265" ref_strand="+" ref_description="SGN-E266265 [cLEI-3-H3]">
      <seq>caagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34481" stop="33365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34181" g_stop="33665" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E266265" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34181" e_stop="33665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTG</genome_strand>
        <mrna_strand>CAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270297" ref_strand="+" ref_description="SGN-E270297 [cLEM-1-L15]">
      <seq>tttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattcaattggtcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34542" stop="33366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34242" g_stop="33666" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E270297" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34242" e_stop="33666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCT</genome_strand>
        <mrna_strand>TTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477046" ref_strand="+" ref_description="SGN-E477046 [cSTB-47-G1]">
      <seq>gaaggttattcgcaaaaacttggtaaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactatgacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccaccaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaggccgttgagaactcacccttccttgagaagctgaagaagaagggttatgaggttctttacatggttgatgctattgatgagtattcaattggtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34336" stop="33369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34037" g_stop="33668" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="370" r_length="370" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E477046" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34037" e_stop="33668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAG</genome_strand>
        <mrna_strand>GAAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATGACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCCGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572994" ref_strand="+" ref_description="SGN-E572994 [32236]">
      <seq>gaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagttgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccaggcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaacggctgttgagaactctcccttcctggagaaactgaataagaagggatatgaggtactttacatggttgatgccattgatgagtaatccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34720" stop="33374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34420" g_stop="33674" g_length="747"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="749" r_length="749" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E572994" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34420" e_stop="33674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCA-GCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAA-GGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATT</genome_strand>
        <mrna_strand>GAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAACGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAATAAGAAGGGATATGAGGTACTTTACATGGTTGATGCCATTGATGAGTAATCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237500" ref_strand="+" ref_description="SGN-E237500 [cLED-19-I6]">
      <seq>cccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatgagtattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34492" stop="33378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34192" g_stop="33678" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E237500" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34192" e_stop="33678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTC</genome_strand>
        <mrna_strand>CCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408484" ref_strand="+" ref_description="SGN-E408484 [PPI-11-A12]">
      <seq>caaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgacatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaaggatatgangtactttacatggttgatgccattgatgagtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34650" stop="33381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34350" g_stop="33679" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="671" r_length="671" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E408484" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34350" e_stop="33679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATT</genome_strand>
        <mrna_strand>CAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGACATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAA-GGATATGANGTACTTTACATGGTTGATGCCATTGATGAGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304296" ref_strand="+" ref_description="SGN-E304296 [cLEX-12-I7]">
      <seq>catcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattctcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaatagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccacaatgatatttactacattactggtgagagcaagaaagctgttgagaactctcccttcctggagaaactgaagaataagggatatgaggtgctctacatggttgatgccattgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34597" stop="33384"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34297" g_stop="33684" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E304296" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34297" e_stop="33684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGA</genome_strand>
        <mrna_strand>CATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCTCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAATAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCACAATGATATTTACTACATTACTGGTGAGAGCAAGAAAGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAATAAGGGATATGAGGTGCTCTACATGGTTGATGCCATTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721975" ref_strand="+" ref_description="SGN-E721975 [FC15DD04]">
      <seq>aatcggccgaattctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgccattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34856" stop="33385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34556" g_stop="33685" g_length="872"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="884" r_length="872" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E721975" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>872</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34556" e_stop="33685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATG</genome_strand>
        <mrna_strand>TCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E555138" ref_strand="+" ref_description="SGN-E555138 [cTSC-6-I21]">
      <seq>tgtcaatgtacgtcaggataaggcataaaagaaaaagaagatagtcggagaactttccaatgactgcgtcactggtgaacaagcgaatccctatgtggatgacgaaagccaaaatagctcacaagggaccagtatgctgctttctccaagatcttgactaaagattgcgaagagcatcttgctgggaatcacttctctgttgagggtcatttggagttccccgctgtcctttttgttccataaagggctccttttgacctctttgacgctgagaaaaaccccgactgcatcaagttgtatgttctccgagagtttatcgtggataactgcgacgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaagaagggatatgaggtgctttacatggttgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34755" stop="33393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34469" g_stop="33693" g_length="777"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="779" r_length="779" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E555138" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E555138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34469" e_stop="33693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTG-GTCACTGGTGAACAAGCAGAAGCCTATTTGGATGA-GAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGC</genome_strand>
        <mrna_strand>TGTCAATGTACGTCAGGATAAGGCATAAAAGAAAAAGAAGATAGTCGGAGAACTTTCCAATGACTGCGTCACTGGTGAACAAGCGAATCCCTATGTGGATGACGAAAGCCAAAATAGCTCACAAGGGACCAGTATGCTGCTTTCTCCAAGATCTTGACTAAAGATTGCGAAGAGCATCTTGCTGGGAATCACTTCTCTGTTGAGGGTCATTTGGAGTTCCCCGCTGTCCTTTTTGTTCCATAAAGGGCTCCTTTTGACCTCTTTGACGCTGAGAAAAACCCCGACTGCATCAAGTTGTATGTTCTCCGAGAGTTTATCGTGGATAACTGCGACGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399778" ref_strand="+" ref_description="SGN-E399778 [cSTC-2-M6]">
      <seq>tgaactgctgaggtaccattgcaccaagagtgggatgagagaccacttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaggctgttgagaactctcccttcctggagaaactgaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34184" stop="33426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33884" g_stop="33726" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E399778" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>159</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33884" e_stop="33726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAA</genome_strand>
        <mrna_strand>TGAACTGCTGAGGTACCATTGCACCAAGAGTGG-GATGAGA-GACCA-CTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300726" ref_strand="+" ref_description="SGN-E300726 [cLEW-8-D15]">
      <seq>tccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagagcaagaaagctgttgagaactctcccttcctggagaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34523" stop="33431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34223" g_stop="33731" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E300726" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34223" e_stop="33731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTG</genome_strand>
        <mrna_strand>TCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAAGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E594627" ref_strand="+" ref_description="SGN-E594627 [37883]">
      <seq>cccttcctggagagttctcaacagccttcttgctctcaccagtaatgtagtaaatatcattctggccctccttcattctggttacatagtccttcaagctggtcatctcatcaccactcttggtggaatggtacctcagcagttcagcgaactttgacctgttctgagaatcctcatggattccaagcttgaggtttttagagaaggcctcatagaacttactgtagtcctccttgttctcagcaatttcaaagaaaagctcaacacacttcttcaccaaattcttgcgaataacctttaggatcttgttctgctgcaatgtctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="33447" stop="34364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33739" g_stop="34064" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E594627" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E594627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33739" e_stop="34064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCT</genome_strand>
        <mrna_strand>CCCTTCCTGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTTACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTGGTGGAATGGTACCTCAGCAGTTCAGCGAACTTTGACCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAAGGCCTCATAGAACTTACTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728725" ref_strand="+" ref_description="SGN-E728725 [LA18DA06]">
      <seq>agctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgggcggcgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccacaaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtgagagcaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34525" stop="33465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34226" g_stop="33764" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E728725" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34226" e_stop="33764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAG</genome_strand>
        <mrna_strand>AGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGGGCGGCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569311" ref_strand="+" ref_description="SGN-E569311 [13730]">
      <seq>ctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattcggaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctccaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaggactatgtaaccagaatgaaggagggccagaatgatatttactacattactgcgtgagagcaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34511" stop="33465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34211" g_stop="33765" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E569311" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34211" e_stop="33765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCT-CAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTG-GTGAGAGCAAGAA</genome_strand>
        <mrna_strand>CTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCGGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGCGTGAGAGCAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301778" ref_strand="+" ref_description="SGN-E301778 [cLEW-25-M15]">
      <seq>ctgacctttttgttccaaaaagggctccttgggacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagatagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcataacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaagagggccaaaatgatatttactacattactggtgagagcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34548" stop="33466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34248" g_stop="33766" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301778" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34248" e_stop="33766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGA</genome_strand>
        <mrna_strand>CTGACCTTTTTGTTCCAAAAAGGGCTCCTTGGGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGATAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCATAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAAGAGGGCCAAAATGATATTTACTACATTACTGGTGAGAGCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583520" ref_strand="+" ref_description="SGN-E583520 [9341]">
      <seq>gtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctggaggtaccattccaccaagagtggtgatgagatgaccagcttggaagggactatggtaaccagaatgaaggaggggcagaatgacatttactacattactggtgagagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34588" stop="33469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34288" g_stop="33769" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E583520" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34288" e_stop="33769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCT-GAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTT-GAA-GGACTAT-GTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCA</genome_strand>
        <mrna_strand>GTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGGAAGGGACTATGGTAACCAGAATGAAGGAGGGGCAGAATGACATTTACTACATTACTGGTGAGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582109" ref_strand="+" ref_description="SGN-E582109 [7742]">
      <seq>ttgacacaaagaagaagcccaacaatatcaagttgtatgttcggcggtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgagggcttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtccaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggaggggccagaatgatatttactacattactggtgagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34509" stop="33471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34209" g_stop="33771" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E582109" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34209" e_stop="33771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGG-GCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGA-GGGCCAGAATGATATTTACTACATTACTGGTGAGAG</genome_strand>
        <mrna_strand>TTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGGCG-GTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGGCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGGCCAGAATGATATTTACTACATTACTGGTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245209" ref_strand="+" ref_description="SGN-E245209 [cLEF-13-P19]">
      <seq>tcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattactggtgagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34482" stop="33471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34182" g_stop="33771" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E245209" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34182" e_stop="33771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAG</genome_strand>
        <mrna_strand>TCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449001" ref_strand="+" ref_description="SGN-E449001 [cSTS-5-G5]">
      <seq>gtctctaatgagtggtcattggtgaataagcagaagcccatatggatgaggaagcctgaggagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgagggtcagctggagttcaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattccgaggaccttcccctcaacatctctagagagatgttacagcagaataagatcctgaaggttattcgcaaaaacttggtaaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactatgacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccaccaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaggccagaatgatatttactacattactggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34717" stop="33475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34417" g_stop="33775" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E449001" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34417" e_stop="33775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTG</genome_strand>
        <mrna_strand>GTCTCTAATGAGTGGTCATTGGTGAATAAGCAGAAGCCCATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTGGAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATGACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584119" ref_strand="+" ref_description="SGN-E584119 [9940]">
      <seq>cttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgacattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcataacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaatgatatttactacattactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34384" stop="33477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34084" g_stop="33777" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E584119" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34084" e_stop="33777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGG</genome_strand>
        <mrna_strand>CTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGACATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCATAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257434" ref_strand="+" ref_description="SGN-E257434 [cLEG-45-O8]">
      <seq>gaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaagagggccagaatgatatttactacattactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34759" stop="33478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34459" g_stop="33778" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E257434" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34459" e_stop="33778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTG</genome_strand>
        <mrna_strand>GAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAAGAGGGCCAGAATGATATTTACTACATTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205962" ref_strand="+" ref_description="SGN-E205962 [cLEC-20-C4]">
      <seq>agagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgacggtcatttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacacggaggactacaataagttctatgaggcgttctctaaaaacctcaagctcggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaacgagggccataatgatatttactacattactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34643" stop="33478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34343" g_stop="33778" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E205962" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34343" e_stop="33778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTG</genome_strand>
        <mrna_strand>AGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGACGGTCATTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACACGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTCGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAACGAGGGCCATAATGATATTTACTACATTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314032" ref_strand="+" ref_description="SGN-E314032 [cTOA-19-A15]">
      <seq>aagagcatttggctgtcaagcacttctctgttgaaggtcagcttgagtttaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgctgagatatcactccacaaaaagtggtgatgagatgaccagcttgaaggactatgtaaccaggatgaaagaaagccagaatgatatttactacattactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34602" stop="33478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34302" g_stop="33778" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E314032" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34302" e_stop="33778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTG</genome_strand>
        <mrna_strand>AAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAAGGTCAGCTTGAGTTTAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAAGCCAGAATGATATTTACTACATTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273485" ref_strand="+" ref_description="SGN-E273485 [cLEN-3-D18]">
      <seq>agtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaaggggcgttctctagaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaaggagggccagaatgatatttactacattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34718" stop="33479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34418" g_stop="33779" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E273485" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34418" e_stop="33779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATG-A--GGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACT</genome_strand>
        <mrna_strand>AGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAAGGGGCGTTCTCTAGAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267392" ref_strand="+" ref_description="SGN-E267392 [cLEI-8-I21]">
      <seq>ttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatgaatgagggccagaatgatatttactacattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34572" stop="33479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34272" g_stop="33779" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267392" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34272" e_stop="33779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACT</genome_strand>
        <mrna_strand>TTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAATGAGGGCCAGAATGATATTTACTACATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601623" ref_strand="+" ref_description="SGN-E601623 [54666]">
      <seq>caagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagttgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttgaaagactatgtaaccagaatgaaggagggccagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34691" stop="33498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34391" g_stop="33798" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E601623" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34391" e_stop="33798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAA</genome_strand>
        <mrna_strand>CAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAAGACTATGTAACCAGAATGAAGGAGGGCCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209739" ref_strand="+" ref_description="SGN-E209739 [cLEC-52-G8]">
      <seq>tttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagaatggggatgagatgaccagcttgaaggactatgtgaccagaatgaaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34677" stop="33506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34377" g_stop="33806" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="572" r_length="572" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E209739" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34377" e_stop="33806"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAG</genome_strand>
        <mrna_strand>TTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAATGGGGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235730" ref_strand="+" ref_description="SGN-E235730 [cLED-15-J24]">
      <seq>cactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatgaccagcttgaaggactatgtgaccagaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34701" stop="33512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34401" g_stop="33812" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E235730" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34401" e_stop="33812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATG</genome_strand>
        <mrna_strand>CACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700400" ref_strand="+" ref_description="SGN-E700400 [FA13AA12]">
      <seq>attattaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgaaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactcccctaagagtggtgatgagatgaccagcttgaaggactatgtgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34894" stop="33519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34594" g_stop="33819" g_length="776"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E700400" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34594" e_stop="33819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGAC</genome_strand>
        <mrna_strand>ATTATTAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGA-AAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCCCTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343868" ref_strand="+" ref_description="SGN-E343868 [cTOF-12-H13]">
      <seq>tgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgnagtaccactccactaagagtggtgatgagatgaccagcttgaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34852" stop="33529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34552" g_stop="33829" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343868" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34552" e_stop="33829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGG</genome_strand>
        <mrna_strand>TGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGNAGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445281" ref_strand="+" ref_description="SGN-E445281 [cSTA-45-C3]">
      <seq>cctcgtgccgaatcggcacgaggatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttcagctttgggaagggtattgtggatcctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactaccgtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccaccttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34488" stop="33531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34183" g_stop="33831" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="376" r_length="353" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E445281" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34183" e_stop="33831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAA</genome_strand>
        <mrna_strand>ATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTCAGCTTTGGGAAGGGTATTGTGGATCCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACCGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCACCTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408105" ref_strand="+" ref_description="SGN-E408105 [PPI-10-E15]">
      <seq>gagggagagagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttnctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccagaagtggtgatgagatgaccagcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34810" stop="33533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34510" g_stop="33833" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="678" r_length="678" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E408105" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34510" e_stop="33833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTT-CTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTG</genome_strand>
        <mrna_strand>GAGGGAGA-GAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTNCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAGAAGTGGTGATGAGATGACCAGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450922" ref_strand="+" ref_description="SGN-E450922 [cSTS-10-J24]">
      <seq>gaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgangattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgaccagcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34782" stop="33533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34482" g_stop="33833" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="650" r_length="650" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E450922" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34482" e_stop="33833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTG</genome_strand>
        <mrna_strand>GAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGANGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCAGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576156" ref_strand="+" ref_description="SGN-E576156 [59329]">
      <seq>cattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34874" stop="33538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34574" g_stop="33838" g_length="737"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="737" r_length="737" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576156" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34574" e_stop="33838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCA</genome_strand>
        <mrna_strand>CATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602041" ref_strand="+" ref_description="SGN-E602041 [55095]">
      <seq>ggaagagaagaaaaagaagaaggttaaggaagttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccattccaccaagagtggtgatgagatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34748" stop="33538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34448" g_stop="33838" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="610" r_length="610" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E602041" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34448" e_stop="33838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCA</genome_strand>
        <mrna_strand>GGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAG-TTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569643" ref_strand="+" ref_description="SGN-E569643 [14108]">
      <seq>ctggtgaacaagcagaagcccatttggatgagtgaagccagnaagagatcacaacaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagttgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaattcggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaagctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34699" stop="33538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34399" g_stop="33838" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E569643" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34399" e_stop="33838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAACAAGCAGAAGCCTATTTGGATGAG-AAAGCCAG-AAGAGATCACAA-AGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCA</genome_strand>
        <mrna_strand>CTGGTGAACAAGCAGAAGCCCATTTGGATGAGTGAAGCCAGNAAGAGATCACAACAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTCGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAAGCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453383" ref_strand="+" ref_description="SGN-E453383 [cSTS-19-F22]">
      <seq>ggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34778" stop="33540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34478" g_stop="33840" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E453383" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34478" e_stop="33840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGAC</genome_strand>
        <mrna_strand>GGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446028" ref_strand="+" ref_description="SGN-E446028 [cSTA-19-P13]">
      <seq>tgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaataagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34434" stop="33540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34134" g_stop="33840" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E446028" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>295</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34134" e_stop="33840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGAC</genome_strand>
        <mrna_strand>TGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAATAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267892" ref_strand="+" ref_description="SGN-E267892 [cLEI-12-J19]">
      <seq>aggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctgcagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactccactaagagtggtgatgagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34755" stop="33542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34455" g_stop="33842" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267892" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34455" e_stop="33842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATG</genome_strand>
        <mrna_strand>AGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTGCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448418" ref_strand="+" ref_description="SGN-E448418 [cSTS-2-L24]">
      <seq>ggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccaccaagagtggtgatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34748" stop="33543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34448" g_stop="33843" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448418" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34448" e_stop="33843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGAT</genome_strand>
        <mrna_strand>GGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCACCAAGAGTGGTGATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603961" ref_strand="+" ref_description="SGN-E603961 [67151]">
      <seq>gaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattcggaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaactgctgaggtaccattccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34733" stop="33561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34433" g_stop="33861" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E603961" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34433" e_stop="33861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCAC</genome_strand>
        <mrna_strand>GAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCGGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGAGGTACCATTCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708895" ref_strand="+" ref_description="SGN-E708895 [FA42AC09]">
      <seq>cacctttttacatagagaaggaaatttctgatgatgaggaggaacacgagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgctctctaaaaacctcaagcttggaatccatgaggattctcagaacagggcaaagtttgctgaactgctgaggtaccactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34838" stop="33564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34538" g_stop="33864" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="685" r_length="675" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E708895" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34538" e_stop="33864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTC</genome_strand>
        <mrna_strand>CATAGAGAAGGAAATTTCTGATGATGAGGAGGAACACGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGCTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485209" ref_strand="+" ref_description="SGN-E485209 [cSTE-17-A17]">
      <seq>ggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacagtaagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagttcgctgaactgctgaggtaccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34778" stop="33565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34478" g_stop="33865" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E485209" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34478" e_stop="33865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACT</genome_strand>
        <mrna_strand>GGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAGTAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTCGCTGAACTGCTGAGGTACCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448858" ref_strand="+" ref_description="SGN-E448858 [cSTS-4-N3]">
      <seq>caagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttttacgaggccttctctaaaaacctcaagcttgggatccatgangattctcagaacaggtcaaagtttgctgaactgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34691" stop="33574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34391" g_stop="33874" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E448858" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34391" e_stop="33874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGA</genome_strand>
        <mrna_strand>CAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTTTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGGATCCATGANGATTCTCAGAACAGGTCAAAGTTTGCTGAACTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332755" ref_strand="+" ref_description="SGN-E332755 [cTOD-18-M6]">
      <seq>gaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaactcaagcttgggatccatgangattctcagaacagggcaaagtttgctgaactgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34841" stop="33575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34541" g_stop="33875" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332755" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34541" e_stop="33875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTG</genome_strand>
        <mrna_strand>GACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAA-CTCAAGCTTGGGATCCATGANGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271224" ref_strand="+" ref_description="SGN-E271224 [cLEM-5-G6]">
      <seq>gagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgaaggtcagcttgagtttaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctctatgttcgccgtgtgttcatcatggataactgtgaggaattgattcctgaatatttgagctttgtgaagggtattgtggattctgaagatcttcccctcaacatctctagagagatgttgcagcagaataagatcctgaaggttattcgcaaaaacttggtgaagaagtgcattgagctattctttgaaattgctgaaaacaaagaagactataacaagttctatgaggccttctcaaagaacctcaagcttggtatccatgaggattcacagaacaggtctaagtttgctgaactgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34657" stop="33576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34357" g_stop="33876" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E271224" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34357" e_stop="33876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCT</genome_strand>
        <mrna_strand>GAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAAGGTCAGCTTGAGTTTAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602751" ref_strand="+" ref_description="SGN-E602751 [55823]">
      <seq>gaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcaaaacaggtcaaagtttgctgaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34918" stop="33577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34618" g_stop="33877" g_length="742"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E602751" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34618" e_stop="33877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGC</genome_strand>
        <mrna_strand>GAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAAAACAGGTCAAAGTTTGCTGAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561833" ref_strand="+" ref_description="SGN-E561833 [19582]">
      <seq>aggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgtgagggccagttggagttttttccaaaagggnctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagttgtatgttcgccngtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagnaagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctacgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34647" stop="33581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34347" g_stop="33881" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E561833" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34347" e_stop="33881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAG----TTC-AA---GG-CTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCC-GTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAG--AGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAA</genome_strand>
        <mrna_strand>AGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTG-TGAGGGCCAGTTGGAGTTTTTTCCAAAAGGGNCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGTTGTATGTTCGCCNGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGNAAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTACGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576899" ref_strand="+" ref_description="SGN-E576899 [31020]">
      <seq>agaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcagaacaggtcaaagtttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34752" stop="33583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34452" g_stop="33883" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576899" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34452" e_stop="33883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTG</genome_strand>
        <mrna_strand>AGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGTCAAAGTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705999" ref_strand="+" ref_description="SGN-E705999 [FA28CH08]">
      <seq>agaggaggtcgatgaggaacaggagaaggaagacaagataaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacatagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcccagagagacattgcagcagaacaagatcctaaaggttattcgcacgaatttggtgaagaagtgtgttgagcttttctttgaaattgctgaagaacacgaggactacaataagttctatgaggcgttctctaaaatcctccagcttggaatccatgaggattctcataacagggcaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34775" stop="33589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34475" g_stop="33889" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E705999" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34475" e_stop="33889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCT-CCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTG-AGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGT</genome_strand>
        <mrna_strand>AGAGGAGGTCGATGAGGAACAGGAGAAGGAAGACAAGATAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACATAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCACGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAAGAAC-ACGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAATCCTCCAGCTTGGAATCCATGAGGATTCTCATAACAGGGCAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591024" ref_strand="+" ref_description="SGN-E591024 [44727]">
      <seq>gaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattcggaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccatgaggattctcaggaacaggtcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34828" stop="33590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34528" g_stop="33890" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E591024" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34528" e_stop="33890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCA-GAACAGGGCAAAG</genome_strand>
        <mrna_strand>GAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCGGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGGAACAGGTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473062" ref_strand="+" ref_description="SGN-E473062 [cSTB-31-A23]">
      <seq>atcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgcgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggccttctctaaaaacctcaagcttggaatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34596" stop="33614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34296" g_stop="33914" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473062" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34296" e_stop="33914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCAT</genome_strand>
        <mrna_strand>ATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGCGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCCTTCTCTAAAAACCTCAAGCTTGGAATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200796" ref_strand="+" ref_description="SGN-E200796 [cLEC-9-D15]">
      <seq>gcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcaccagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcggttctctaaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34583" stop="33631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34283" g_stop="33931" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E200796" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34283" e_stop="33931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGC-GTTCTCTAAAAACC</genome_strand>
        <mrna_strand>GCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCACCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGGTTCTCTAAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249015" ref_strand="+" ref_description="SGN-E249015 [cLEF-49-O17]">
      <seq>gaggtctatgatgaaaaggagaagggggagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccataagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34771" stop="33633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34471" g_stop="33933" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="539" r_length="539" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E249015" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34471" e_stop="33933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAA</genome_strand>
        <mrna_strand>GAGGTCTATGATGAAAAGGAGAAGGGGGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCATAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E283387" ref_strand="+" ref_description="SGN-E283387 [cLER-12-G6]">
      <seq>agaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaataagttctatgaggcgttctctaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34686" stop="33633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34386" g_stop="33933" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E283387" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34386" e_stop="33933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAA</genome_strand>
        <mrna_strand>AGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312034" ref_strand="+" ref_description="SGN-E312034 [cTOA-11-C5]">
      <seq>aaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggactacaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34738" stop="33658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34438" g_stop="33958" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E312034" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34438" e_stop="33958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATA</genome_strand>
        <mrna_strand>AAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271306" ref_strand="+" ref_description="SGN-E271306 [cLEM-5-B10]">
      <seq>agaggatgtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaaggaggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34775" stop="33663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34475" g_stop="33963" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E271306" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34475" e_stop="33963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTA</genome_strand>
        <mrna_strand>AGAGGATGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326138" ref_strand="+" ref_description="SGN-E326138 [cTOC-16-N14]">
      <seq>gtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaacaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34768" stop="33671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34468" g_stop="33971" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E326138" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34468" e_stop="33971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAG</genome_strand>
        <mrna_strand>GTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245854" ref_strand="+" ref_description="SGN-E245854 [cLEF-51-M11]">
      <seq>aaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctgagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34736" stop="33675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34436" g_stop="33975" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E245854" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34436" e_stop="33975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAA</genome_strand>
        <mrna_strand>AAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345366" ref_strand="+" ref_description="SGN-E345366 [cTOF-13-A6]">
      <seq>aaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34903" stop="33679"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34603" g_stop="33979" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E345366" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34603" e_stop="33979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTG</genome_strand>
        <mrna_strand>AAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303471" ref_strand="+" ref_description="SGN-E303471 [cLEX-2-K21]">
      <seq>tgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttgaaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34880" stop="33680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34580" g_stop="33980" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303471" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303471" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34580" e_stop="33980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCT</genome_strand>
        <mrna_strand>TGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487899" ref_strand="+" ref_description="SGN-E487899 [cSTE-26-N2]">
      <seq>gaagtctctaatgagtggtcattggtgaataagcagaagcccatatggatgaggaagcctgaggagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgagggtcagctggagttcaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgttcattatggataactgtgaagaattgattcctgaatatttgagctttgtgaagggtattgtggattccgaggaccttcccctcaacatctctagagagatgttacagcagaataagatcctgaaggttattcgcaaaaacttggtaaagaagtgcattgagctattctttgaaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34720" stop="33681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34420" g_stop="33981" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E487899" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34420" e_stop="33981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGC</genome_strand>
        <mrna_strand>GAAGTCTCTAATGAGTGGTCATTGGTGAATAAGCAGAAGCCCATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTGGAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTCATTATGGATAACTGTGAAGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E592058" ref_strand="+" ref_description="SGN-E592058 [45783]">
      <seq>ttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttgggtgaaaaacgtgtgttgagcttttcttttgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35104" stop="33684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34804" g_stop="33984" g_length="821"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="824" r_length="824" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E592058" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>821</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34804" e_stop="33984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTT-GGTGAAGAA-GTGTGTTGAGCTTTTC-TTTGAAAT</genome_strand>
        <mrna_strand>TTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGGTGAAAAACGTGTGTTGAGCTTTTCTTTTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250826" ref_strand="+" ref_description="SGN-E250826 [cLEG-13-A10]">
      <seq>ttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgatgagggaaaggtggaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttgagcttttctttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34848" stop="33687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34548" g_stop="33987" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E250826" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34548" e_stop="33987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGA</genome_strand>
        <mrna_strand>TTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGATGAGGGAAAGGTGGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557226" ref_strand="+" ref_description="SGN-E557226 [20958]">
      <seq>gttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctcctnttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaacaagatcctaaaggttattcgcaagaattgggtgaagaagtgtgttgagcttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34877" stop="33691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34577" g_stop="33991" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E557226" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34577" e_stop="33991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCT</genome_strand>
        <mrna_strand>GTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTNTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTGGGTGAAGAAGTGTGTTGAGCTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473028" ref_strand="+" ref_description="SGN-E473028 [cSTB-30-H18]">
      <seq>agtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgcgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatcttcagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaacaaccgtgttgagcttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34641" stop="33691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34341" g_stop="33991" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473028" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34341" e_stop="33991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCT</genome_strand>
        <mrna_strand>AGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGCGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTTCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAACAACCGTGTTGAGCTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201972" ref_strand="+" ref_description="SGN-E201972 [cLEC-7-E24]">
      <seq>tcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcncaagaatttggtgaagaagtgtgttgagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34702" stop="33694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34402" g_stop="33994" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E201972" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34402" e_stop="33994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTT</genome_strand>
        <mrna_strand>TCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCNCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456544" ref_strand="+" ref_description="SGN-E456544 [cSTS-29-H14]">
      <seq>gggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaatttggtgaagaagtgtgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34605" stop="33699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34305" g_stop="33999" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E456544" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34305" e_stop="33999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGA</genome_strand>
        <mrna_strand>GGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591478" ref_strand="+" ref_description="SGN-E591478 [45191]">
      <seq>ctctttcactgttaccaggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaacgggtatcgtggattctgaggaccttcctctcaacatctcgagagagacattgcagcagaaccaagatcctaaaggttattcgcaagaattggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35012" stop="33713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34712" g_stop="34013" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E591478" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34712" e_stop="34013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAA-GGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAA-CAAGATCCTAAAGGTTATTCGCAAGAATTTGGTG</genome_strand>
        <mrna_strand>CTCTTTCACTGTTACCA-GGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAACGGGTATCGTGGATTCTGAGGACCTTCCTCTCAACATCTCGAGAGAGACATTGCAGCAGAACCAAGATCCTAAAGGTTATTCGCAAGAA-TTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698452" ref_strand="+" ref_description="SGN-E698452 [FA06BE01]">
      <seq>cggtaggtcgatgaggaaaaggagaaggaagagaagaaaaccaagaaggtccaagaagtttccaatgagtggtcactggcgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgcgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagacgcccaaccacatcaagttgcatgttcgccgcgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcttctcaacatctccagagagacattgcagccgaccaagatcctaaaggttattcccaagaatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34772" stop="33715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34474" g_stop="34015" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E698452" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34474" e_stop="34015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGG</genome_strand>
        <mrna_strand>CGGTAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAACCAAGAAGGTCCAAGAAGTTTCCAATGAGTGGTCACTGGCGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGCGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGACGCCCAACCACATCAAGTTGCATGTTCGCCGCGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCTTCTCAACATCTCCAGAGAGACATTGCAGCCGACCAAGATCCTAAAGGTTATTCCCAAGAATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454429" ref_strand="+" ref_description="SGN-E454429 [cSTS-23-E4]">
      <seq>cgaaggctcaaggacctgattaagaagcattctgagttcatcagttatccaatctctttgtgggttgagaagaccatagaaaaggaaatctctgatgatgaggacgaagaggagaagaaagatgaggaaggaaaggtagaagaggttgatgaagaaaaggagaaggaagagaagaaaaagaagaaaattaaggaagtctctaatgagtggtcattggtgaataagcagaagcccatatggatgaggaagcctgaggagatcacaaaagaggagtatgctgcattctacaagagcctgacaaatgattgggaagagcatttggctgtcaagcacttctctgttgagggtcagctggagttcaaggctgttctttttattccaaagagagctccttttgacctctttgacaccaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgttcattatggataactgtgaagaattgattcctgaatatttgagctttgtgaagggtattgtggattccgaggaccttcccctcaacatctctagagagatgttacagcagaataagatcctgaaggttattcgcaaaaacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34912" stop="33716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34612" g_stop="34016" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E454429" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34612" e_stop="34016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTG</genome_strand>
        <mrna_strand>CGAAGGCTCAAGGACCTGATTAAGAAGCATTCTGAGTTCATCAGTTATCCAATCTCTTTGTGGGTTGAGAAGACCATAGAAAAGGAAATCTCTGATGATGAGGACGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAAGAGGTTGATGAAGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTGGTGAATAAGCAGAAGCCCATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTGGAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTCATTATGGATAACTGTGAAGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554167" ref_strand="+" ref_description="SGN-E554167 [cTSC-3-H1]">
      <seq>ctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaagaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34986" stop="33717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34686" g_stop="34017" g_length="670"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="670" r_length="670" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E554167" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E554167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34686" e_stop="34017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTT</genome_strand>
        <mrna_strand>CTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478726" ref_strand="+" ref_description="SGN-E478726 [cSTD-6-D18]">
      <seq>ccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaaaggtattgtggattttgaggaccttactctcaacatctccagagagacattgcagcagaacaagatcctaaaggttattcgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34839" stop="33723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34539" g_stop="34023" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E478726" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34539" e_stop="34023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAA</genome_strand>
        <mrna_strand>CCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAAGGTATTGTGGATTTTGAGGACCTTACTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244978" ref_strand="+" ref_description="SGN-E244978 [cLEF-2-F19]">
      <seq>aaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatgtccagagagacattgcagcccaacatgatcctaaaggttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34723" stop="33728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34423" g_stop="34028" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E244978" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34423" e_stop="34028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATT</genome_strand>
        <mrna_strand>AAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATGTCCAGAGAGACATTGCAGCCCAACATGATCCTAAAGGTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585848" ref_strand="+" ref_description="SGN-E585848 [68312]">
      <seq>gcacgaggcactgttaccaggatacatctggtgagaaccttggcaggtgtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattgagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaagtcgtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaacaagatcctaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35006" stop="33734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34713" g_stop="34034" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E585848" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34713" e_stop="34034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTC-TTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATT-AGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAG--GTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAG</genome_strand>
        <mrna_strand>GCACGAGGCACTGTTACCA-GGATACATCTGGTGAGAACCTTGGCAGGTGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTGAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGTCGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446421" ref_strand="+" ref_description="SGN-E446421 [cSTA-21-G22]">
      <seq>aggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatctccagagagacattgcagcagaataagatcctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34830" stop="33735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34530" g_stop="34035" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E446421" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34530" e_stop="34035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAA</genome_strand>
        <mrna_strand>AGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAATAAGATCCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480406" ref_strand="+" ref_description="SGN-E480406 [cSTD-13-F12]">
      <seq>cagaagcccatttggatgaggaagccagaagagatacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccagaaagggctccttttgacctctttgacacaaagaagaagcccatcactgtcaagctgtatgttcgccgggtgtttatcatggataactgtgaggagttgagtcctgaatatttgagctttgtgaagggtattgtggattctgaagaccttgctctcccatgttcagagagacattgcagctgaacaagatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34687" stop="33739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34387" g_stop="34039" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E480406" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34387" e_stop="34039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCC</genome_strand>
        <mrna_strand>CAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGAT-ACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAGAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCATCACTGTCAAGCTGTATGTTCGCCGGGTGTTTATCATGGATAACTGTGAGGAGTTGAGTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGACCTTGCTCTC-CCATGTTCAGAGAGACATTGCAGCTGAACAAGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203998" ref_strand="+" ref_description="SGN-E203998 [cLEC-22-E17]">
      <seq>gaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggacctttctctcaacatctccagagagacattgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34832" stop="33751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34532" g_stop="34051" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E203998" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34532" e_stop="34051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGC</genome_strand>
        <mrna_strand>GAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTTCTCTCAACATCTCCAGAGAGACATTGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264589" ref_strand="+" ref_description="SGN-E264589 [cLEG-67-L4]">
      <seq>tctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgacgaccttcctctcacattctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34629" stop="33767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34329" g_stop="34066" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E264589" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>264</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34329" e_stop="34066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCA</genome_strand>
        <mrna_strand>TCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGACGACCTTCCTCTCACATTCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725095" ref_strand="+" ref_description="SGN-E725095 [FC26AC03]">
      <seq>gggcgattggcggccaatcggccgaattacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctcaacatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35214" stop="33769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34911" g_stop="34069" g_length="843"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="859" r_length="843" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E725095" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34911" e_stop="34069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCT</genome_strand>
        <mrna_strand>ATCGGCCGAATTACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620233" ref_strand="+" ref_description="SGN-E620233 [70932]">
      <seq>aaactagtggatccccggcctgcaggttatgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggaccttcctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34695" stop="33776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34395" g_stop="34076" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="349" r_length="320" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E620233" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34395" e_stop="34076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTC</genome_strand>
        <mrna_strand>TGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331028" ref_strand="+" ref_description="SGN-E331028 [cTOD-6-I1]">
      <seq>tgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtattgtggattctgaggacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34928" stop="33784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34628" g_stop="34084" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E331028" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34628" e_stop="34084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACC</genome_strand>
        <mrna_strand>TGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405689" ref_strand="+" ref_description="SGN-E405689 [PPI-1-G2]">
      <seq>gaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaatatttgagctttgtgaaaggtattgtggattctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34889" stop="33789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34589" g_stop="34089" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E405689" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34589" e_stop="34089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGA</genome_strand>
        <mrna_strand>GAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATATTTGAGCTTTGTGAAAGGTATTGTGGATTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245070" ref_strand="+" ref_description="SGN-E245070 [cLEF-13-B9]">
      <seq>tcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctatgacacagagaagaagcccaacaacatcaagttgtatgttcgccgtgtgcttatcatggataactgtgatgagttgattcctgaatatttgagctttgtgaagggtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34767" stop="33801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34467" g_stop="34101" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E245070" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34467" e_stop="34101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTAT</genome_strand>
        <mrna_strand>TCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTATGACACAGAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGCTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208729" ref_strand="+" ref_description="SGN-E208729 [cLEC-51-A3]">
      <seq>gaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagacggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacataggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcaattcgagctcatggctgtcctttttgttccaaaaagggctccttttgacctctttgacacactgatgaagcccaactacatcctggtgtatgttcgccctgtctttatcatggataactgtgatgagttgattcctgaatatttgagctttctgaaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34841" stop="33804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34541" g_stop="34104" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E208729" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34541" e_stop="34104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGG</genome_strand>
        <mrna_strand>GACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGACGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACATAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAATTCGAGCTCATGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACACTGATGAAGCCCAACTACATCCTGGTGTATGTTCGCCCTGTCTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTCTGAAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559349" ref_strand="+" ref_description="SGN-E559349 [18832]">
      <seq>aggtacaaaatggtcctttatctcaaggaggatcagcttgaaataccttgaagaacgtatggctcaatgaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccataagaagaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgtttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccggtgtgttttatcatgggataactgtgaggagttgattcctggaatatttgagctttgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34966" stop="33808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34667" g_stop="34108" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E559349" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34667" e_stop="34108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTG-AATACCTTGAAGAACGTA-GGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTG-TTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCC-GTGTG-TTTATCAT-GGATAACTGTGATGAGTTGATTCCT-GAATATTTGAGCTTTGTGA</genome_strand>
        <mrna_strand>AGGTA-CAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAAATACCTTGAAGAACGTATGGCTCAATGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATA-AGAA-GAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGGTGTGTTTTATCATGGGATAACTGTGAGGAGTTGATTCCTGGAATATTTGAGCTTTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246597" ref_strand="+" ref_description="SGN-E246597 [cLEF-45-D20]">
      <seq>tcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34905" stop="33809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34605" g_stop="34109" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="497" r_length="497" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E246597" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34605" e_stop="34109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTG</genome_strand>
        <mrna_strand>TCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248163" ref_strand="+" ref_description="SGN-E248163 [cLEF-55-A4]">
      <seq>aaaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggaattcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatttgagctttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34686" stop="33810"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34386" g_stop="34110" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E248163" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34386" e_stop="34110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGT</genome_strand>
        <mrna_strand>AAAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAATTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204395" ref_strand="+" ref_description="SGN-E204395 [cLEC-13-J23]">
      <seq>agaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggacagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagatgattcctgaatatttgagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34890" stop="33812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34590" g_stop="34112" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E204395" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34590" e_stop="34112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTT</genome_strand>
        <mrna_strand>AGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGACAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGATGATTCCTGAATATTTGAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208789" ref_strand="+" ref_description="SGN-E208789 [cLEC-51-B4]">
      <seq>accttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttcggaaaagggctccttttgacctctttgacaccaaaagaagaagcccaacaacatcaagttgtatgttcgccgggtgtttatcatggataactgtgatgagttgattcctgaatatttgagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34977" stop="33813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34677" g_stop="34113" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E208789" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34677" e_stop="34113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACA-C-AAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTT</genome_strand>
        <mrna_strand>ACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCGGAAAAGGGCTCCTTTTGACCTCTTTGACACCAAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGGGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455203" ref_strand="+" ref_description="SGN-E455203 [cSTS-25-J21]">
      <seq>gttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcctnnctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacatatcaagctgtatgttcgccgtgtgtttatcatggataactgtgagggagtgattcctggatatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35110" stop="33817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34810" g_stop="34117" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E455203" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34810" e_stop="34117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAG-AAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGA</genome_strand>
        <mrna_strand>GTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCCTNNCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAAC-ATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGGAGTGATTCCTGGATATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246756" ref_strand="+" ref_description="SGN-E246756 [cLEF-45-D10]">
      <seq>cctgattaagaagcactctgagttcattagcgggcctatttctctgtgggttgagaagaccatagataaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggatggaatggtggaggaggtcgatgatgataaggagaatgaagagaatatctagaagacggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtttatcatggataactgtgatgagttgattcctgaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34898" stop="33820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34598" g_stop="34120" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E246756" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34598" e_stop="34120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATT</genome_strand>
        <mrna_strand>CCTGATTAAGAAGCACTCTGAGTTCATTAGCGGGCCTATTTCTCTGTGGGTTGAGAAGACCATAGATAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGATGGAATGGTGGAGGAGGTCGATGATGATAAGGAGAATGAAGAGAATATCTAGAAGACGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576090" ref_strand="+" ref_description="SGN-E576090 [59252]">
      <seq>gtcaatttggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctccaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctctatgttcgccgtgtgtttatcatggataactgtgaggagttgattcctgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35121" stop="33822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34821" g_stop="34122" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E576090" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34821" e_stop="34122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATA</genome_strand>
        <mrna_strand>GTCAATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTCCAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTTATCATGGATAACTGTGAGGAGTTGATTCCTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252326" ref_strand="+" ref_description="SGN-E252326 [cLEG-12-J10]">
      <seq>ttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaacatcaagttgtatgttcgccgtgtgtntatcatggataactgtgatgagttgattcctgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35070" stop="33822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34770" g_stop="34122" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E252326" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34770" e_stop="34122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATA</genome_strand>
        <mrna_strand>TTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTNTATCATGGATAACTGTGATGAGTTGATTCCTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572745" ref_strand="+" ref_description="SGN-E572745 [31948]">
      <seq>cggcacgaggtttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgatttggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgtcgccgtgtgtttaatcatggataactgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34950" stop="33841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34660" g_stop="34141" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E572745" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34660" e_stop="34141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTT-ATCATGGATAACTGTG</genome_strand>
        <mrna_strand>CGGCACGAGGTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTTGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATG-TCGCCGTGTGTTTAATCATGGATAACTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485068" ref_strand="+" ref_description="SGN-E485068 [cSTE-16-M10]">
      <seq>accagggatacatctggtgaaaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcgccgtgtgtttatcatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34999" stop="33850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34699" g_stop="34150" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E485068" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34699" e_stop="34150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGG</genome_strand>
        <mrna_strand>ACCAGGGATACATCTGGTGAAAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGCCGTGTGTTTATCATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583453" ref_strand="+" ref_description="SGN-E583453 [9274]">
      <seq>ttcactgttaccaggcatacatctggtgaaaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttggctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaagaagcccaacaatatcaagctgtatgttcggcgtgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35008" stop="33859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34708" g_stop="34159" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E583453" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34708" e_stop="34159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTT-GCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGT</genome_strand>
        <mrna_strand>TTCACTGTTACCAGGCATACATCTGGTGAAAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAATATCAAGCTGTATGTTCGGCGTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580197" ref_strand="+" ref_description="SGN-E580197 [5440]">
      <seq>cttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacacaaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34930" stop="33896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34630" g_stop="34196" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="435" r_length="435" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E580197" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34630" e_stop="34196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAG</genome_strand>
        <mrna_strand>CTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243285" ref_strand="+" ref_description="SGN-E243285 [cLEF-12-P11]">
      <seq>ctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtggaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaatgtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34897" stop="33902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34597" g_stop="34202" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E243285" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34597" e_stop="34202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACA</genome_strand>
        <mrna_strand>CTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTGGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAATGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E460701" ref_strand="+" ref_description="SGN-E460701 [cPRO-32-I3]">
      <seq>ggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaggagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttccaaaaagggctccttttgacctctttgacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34697" stop="33902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34397" g_stop="34202" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E460701" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>196</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34397" e_stop="34202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACA</genome_strand>
        <mrna_strand>GGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAGGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486001" ref_strand="+" ref_description="SGN-E486001 [cSTE-20-F3]">
      <seq>tgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggttgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggccagttggagttcaaggctgtcctttttgttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35081" stop="33933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34781" g_stop="34233" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486001" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34781" e_stop="34233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCC</genome_strand>
        <mrna_strand>TGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTTGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305367" ref_strand="+" ref_description="SGN-E305367 [cLEX-15-A1]">
      <seq>gaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgttgagggtcagttggagttcaaggctgtcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34828" stop="33939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34528" g_stop="34239" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E305367" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34528" e_stop="34239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTT</genome_strand>
        <mrna_strand>GAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214889" ref_strand="+" ref_description="SGN-E214889 [cLEC-78-I20]">
      <seq>tagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcnaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgatttgggagagcatcttgctgtgaagcacttctctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35132" stop="33970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34832" g_stop="34270" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E214889" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34832" e_stop="34270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTG</genome_strand>
        <mrna_strand>TAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCNAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTTGGGAGAGCATCTTGCTGTGAAGCACTTCTCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736103" ref_strand="+" ref_description="SGN-E736103 [LC04BE03]">
      <seq>gatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcacttctctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36546" stop="33972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36246" g_stop="36159" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="230" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34272" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="870" r_length="640" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E736103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36246" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGT</genome_strand>
        <mrna_strand>GATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250724" ref_strand="+" ref_description="SGN-E250724 [cLEG-7-M16]">
      <seq>gcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35149" stop="33979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34849" g_stop="34279" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E250724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34849" e_stop="34279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACT</genome_strand>
        <mrna_strand>GCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450448" ref_strand="+" ref_description="SGN-E450448 [cSTS-9-K4]">
      <seq>aggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35076" stop="33980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34776" g_stop="34280" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="497" r_length="497" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E450448" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34776" e_stop="34280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCAC</genome_strand>
        <mrna_strand>AGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305707" ref_strand="+" ref_description="SGN-E305707 [cLEX-14-E13]">
      <seq>agcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtgaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35058" stop="33981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34758" g_stop="34281" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E305707" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34758" e_stop="34281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCA</genome_strand>
        <mrna_strand>AGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366227" ref_strand="+" ref_description="SGN-E366227 [cLPT-1-A8]">
      <seq>gggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattgggaagagcatcttgctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34967" stop="33986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34667" g_stop="34286" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E366227" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34667" e_stop="34286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTG</genome_strand>
        <mrna_strand>GGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246845" ref_strand="+" ref_description="SGN-E246845 [cLEF-41-C14]">
      <seq>ggtgctgatgttagcatgattggtcaattcggtgtaggtttgtactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgactaatgattggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35143" stop="34002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34843" g_stop="34302" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E246845" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34843" e_stop="34302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGA</genome_strand>
        <mrna_strand>GGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTGTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739763" ref_strand="+" ref_description="SGN-E739763 [LC18DA08]">
      <seq>gccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagtgaagaaaaagaagaaagtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctacaagagcttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36620" stop="34013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36320" g_stop="36159" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="304" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34313" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="903" r_length="599" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E739763" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36320" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACT</genome_strand>
        <mrna_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGTGAAGAAAAAGAAGAAAGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738311" ref_strand="+" ref_description="SGN-E738311 [LC13AG12]">
      <seq>ccttcttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36618" stop="34025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36322" g_stop="36159" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="306" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34325" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="893" r_length="587" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E738311" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36322" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTAC</genome_strand>
        <mrna_strand>CCTTCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739113" ref_strand="+" ref_description="SGN-E739113 [LC16AG02]">
      <seq>gttttatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaagggtcaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaagggaagagtatgctgctttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36630" stop="34026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36330" g_stop="36159" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="314" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34326" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="901" r_length="587" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E739113" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>900</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36330" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAA-GGAAGAGTATGCTGCTTTCTA</genome_strand>
        <mrna_strand>GTTTTATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGGTCAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGGAAGAGTATGCTGCTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268401" ref_strand="+" ref_description="SGN-E268401 [cLEI-13-D17]">
      <seq>gatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttgccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgacgagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaagccagaagagatcacaaaggaagagtatgctgctttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35050" stop="34026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34750" g_stop="34326" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268401" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34750" e_stop="34326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTA</genome_strand>
        <mrna_strand>GATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTGCCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGACGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445493" ref_strand="+" ref_description="SGN-E445493 [cSTA-45-P1]">
      <seq>gtcaatttggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggataaggagaaggaagagaagaaaaagaagaaggttaaggaagtttctaatgagtggtcactggtgaacaagcagaagcccatttggatgaggaagccagaagagatcacaaaggaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35121" stop="34040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34821" g_stop="34340" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E445493" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34821" e_stop="34340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAG</genome_strand>
        <mrna_strand>GTCAATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGATAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTTAAGGAAGTTTCTAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCAGAAGAGATCACAAAGGAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272921" ref_strand="+" ref_description="SGN-E272921 [cLEM-25-F10]">
      <seq>tcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaagctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgatgagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggatgagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35120" stop="34064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34820" g_stop="34364" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E272921" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34820" e_stop="34364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAG</genome_strand>
        <mrna_strand>TCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAAGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGATGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269519" ref_strand="+" ref_description="SGN-E269519 [cLEM-2-A13]">
      <seq>ttcatggtatctcttgcagctggggctgatggcagcatgactggtcaattcggtgtacgcttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtctaagaagtttccaatgagtggtcactggtgaacaaacagaagcctatttggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35164" stop="34070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34864" g_stop="34370" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E269519" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34864" e_stop="34370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATG</genome_strand>
        <mrna_strand>TTCATGGTATCTCTTGCAGCTGGGGCTGATGGCAGCATGACTGGTCAATTCGGTGTACGCTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCTAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAACAGAAGCCTATTTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737299" ref_strand="+" ref_description="SGN-E737299 [LC09AG12]">
      <seq>gctttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagtgaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagcagaagcctatttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36620" stop="34071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36320" g_stop="36159" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="304" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34371" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="845" r_length="541" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E737299" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36320" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGAT</genome_strand>
        <mrna_strand>GCTTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGTGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205687" ref_strand="+" ref_description="SGN-E205687 [cLEC-21-M7]">
      <seq>aagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtccttttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtgaacaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35157" stop="34086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34857" g_stop="34386" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E205687" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205687" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34857" e_stop="34386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCC-TTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCA</genome_strand>
        <mrna_strand>AAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326998" ref_strand="+" ref_description="SGN-E326998 [cTOC-18-O1]">
      <seq>aataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtaaaggaggtcgatgaggaaaaggagaaggaagagaagaaaagaagaaggtcaaagaagtttccaatgagtggtcactggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35203" stop="34093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34903" g_stop="34393" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E326998" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34903" e_stop="34393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGA</genome_strand>
        <mrna_strand>AATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAAAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAG-AAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707106" ref_strand="+" ref_description="SGN-E707106 [FA32AC12]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34397" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="835" r_length="515" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E707106" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707250" ref_strand="+" ref_description="SGN-E707250 [FA32BH08]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34397" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="835" r_length="515" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E707250" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737876" ref_strand="+" ref_description="SGN-E737876 [LC11CC01]">
      <seq>gccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagtgaagaaaaagaagaaggtcaaagaagtttccaatgagtggtcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36620" stop="34097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36320" g_stop="36159" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="304" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34397" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="819" r_length="515" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E737876" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36320" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</genome_strand>
        <mrna_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGTGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212274" ref_strand="+" ref_description="SGN-E212274 [cLEC-75-P23]">
      <seq>gaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaaaaaagatgatgagggaaaggtagaggaggtcgcttaggaaaaggagaaggaagagaaaaaaaaaaagaaagtcgcagaagtttcccatgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35078" stop="34104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34778" g_stop="34404" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E212274" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34778" e_stop="34404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTG</genome_strand>
        <mrna_strand>GAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAAAAAGATGATGAGGGAAAGGTAGAGGAGGTCGCTTAGGAAAAGGAGAAGGAAGAGAAAAAAAAAAAGAAAGTCGCAGAAGTTTCCCATGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720297" ref_strand="+" ref_description="SGN-E720297 [FC10BF01]">
      <seq>aatcggccgaattgctcttgcattcgagtccctttgtgttccatttcgccttatagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtttccaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36655" stop="34107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36353" g_stop="36159" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="209" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="351" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34407" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="856" r_length="505" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E720297" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36353" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGA</genome_strand>
        <mrna_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTATAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271872" ref_strand="+" ref_description="SGN-E271872 [cLEM-8-P17]">
      <seq>aattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtcaaagaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35189" stop="34115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34889" g_stop="34415" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E271872" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34889" e_stop="34415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTT</genome_strand>
        <mrna_strand>AATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735634" ref_strand="+" ref_description="SGN-E735634 [LC02BE06]">
      <seq>gattccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaagaagaaggtccaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36642" stop="34120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36342" g_stop="36159" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="326" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34420" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="818" r_length="492" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E735634" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36342" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAG</genome_strand>
        <mrna_strand>GATTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229758" ref_strand="+" ref_description="SGN-E229758 [cLEL-4-L47](-)">
      <seq>ggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccccaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35113" stop="34128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34813" g_stop="34425" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E229758" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34813" e_stop="34425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGT</genome_strand>
        <mrna_strand>GGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCCCAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209056" ref_strand="+" ref_description="SGN-E209056 [cLEC-38-F14]">
      <seq>atggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgatgagggaaaggtagaggaggtcgatgaggaaaaggagaacgaagagaagaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35161" stop="34131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34861" g_stop="34431" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E209056" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34861" e_stop="34431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAA</genome_strand>
        <mrna_strand>ATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGATGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAACGAAGAGAAGAAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705415" ref_strand="+" ref_description="SGN-E705415 [FA27AD03]">
      <seq>agcctctctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36343" g_stop="36159" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="327" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34434" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="805" r_length="478" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E705415" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36343" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAA</genome_strand>
        <mrna_strand>AGCCTCTCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703477" ref_strand="+" ref_description="SGN-E703477 [FA21CE02]">
      <seq>gtccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaagagaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36640" stop="34134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36340" g_stop="36159" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="324" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34434" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="802" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703477" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36340" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAA</genome_strand>
        <mrna_strand>GTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553743" ref_strand="+" ref_description="SGN-E553743 [cTSC-2-B18]">
      <seq>gtccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgagggaaaggagaaggaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36640" stop="34142"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36340" g_stop="36159" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="324" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34442" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="794" r_length="470" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E553743" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36340" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAG</genome_strand>
        <mrna_strand>GTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGGAAAGGAGAAGGAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725368" ref_strand="+" ref_description="SGN-E725368 [FC26DE10]">
      <seq>gattggcggccaatcggccgaattcccatggggatccgatctcttgcattcgagtccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaaggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36653" stop="34144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36353" g_stop="36159" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="235" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="377" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34444" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="845" r_length="468" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E725368" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36353" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAG</genome_strand>
        <mrna_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736728" ref_strand="+" ref_description="SGN-E736728 [LC06DH04]">
      <seq>cctctcctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36343" g_stop="36159" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="326" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34447" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="791" r_length="465" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E736728" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36343" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGG</genome_strand>
        <mrna_strand>CCTCT-CCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720195" ref_strand="+" ref_description="SGN-E720195 [FC10AD05]">
      <seq>aatcggccgaattgctcttgcattcgagtccctttgtgatccagttcgccttatagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatgaggaaaaggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36655" stop="34149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36353" g_stop="36159" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="209" r_length="195" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="351" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34449" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="814" r_length="463" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E720195" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>800</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36353" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAA</genome_strand>
        <mrna_strand>CTCTTGCATTCGAGTCCCTTTGTGATCCAGTTCGCCTTATAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200791" ref_strand="+" ref_description="SGN-E200791 [cLEC-9-B15]">
      <seq>ttcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggttgaggaggtcgatgaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35116" stop="34156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34816" g_stop="34456" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E200791" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34816" e_stop="34456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAA</genome_strand>
        <mrna_strand>TTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTTGAGGAGGTCGATGAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300244" ref_strand="+" ref_description="SGN-E300244 [cLEW-17-H11]">
      <seq>gcttgaatacctcgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagaaaatgaaatttctgatgatgaggaggaagaggagaagaaacatgaggagggaaaggtagaggacgtcgatgaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34931" stop="34156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34631" g_stop="34456" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E300244" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>176</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34631" e_stop="34456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAA</genome_strand>
        <mrna_strand>GCTTGAATACCTCGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAAAATGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAACATGAGGAGGGAAAGGTAGAGGACGTCGATGAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267370" ref_strand="+" ref_description="SGN-E267370 [cLEI-8-A23]">
      <seq>ctggtgctgatgttagcatgattggtcaattcggggtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtatgctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaacaggagaagaaagatgaggagggaaaggtagaggaggtcgatgagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35145" stop="34158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34845" g_stop="34458" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267370" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34845" e_stop="34458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGA</genome_strand>
        <mrna_strand>CTGGTGCTGATGTTAGCATGATTGGTCAATTCGGGGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTATGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAACAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207158" ref_strand="+" ref_description="SGN-E207158 [cLEC-30-A16]">
      <seq>tttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagatgaggtcgctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="34950" stop="34160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34650" g_stop="34460" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E207158" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34650" e_stop="34460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAG</genome_strand>
        <mrna_strand>TTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGATGAGGTCGCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703527" ref_strand="+" ref_description="SGN-E703527 [FA21DA08]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34462" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="770" r_length="450" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E703527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202107" ref_strand="+" ref_description="SGN-E202107 [cLEC-7-K1]">
      <seq>gctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaacaaagatgaggagggaaaggtagaggaggtcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35155" stop="34162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34855" g_stop="34462" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E202107" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34855" e_stop="34462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATG</genome_strand>
        <mrna_strand>GCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAACAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553682" ref_strand="+" ref_description="SGN-E553682 [cTSC-1-O11]">
      <seq>gtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36632" stop="34167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36332" g_stop="36159" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="316" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34467" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="761" r_length="445" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E553682" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36332" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGT</genome_strand>
        <mrna_strand>GTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577951" ref_strand="-" ref_description="SGN-E577951 [LE08BH07]">
      <seq>aggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggtagaggaggtctagtgggttataatagaaggtttatggaagaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36553" stop="34147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36253" g_stop="36159" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="237" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34469" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="680" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E577951" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577951" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="36253" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAG</genome_strand>
        <mrna_strand>AGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737808" ref_strand="+" ref_description="SGN-E737808 [LC11BC01]">
      <seq>gccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgattgatgaggaggaagaggagaagaaagatggaggagggaaaggtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36620" stop="34174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36320" g_stop="36159" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="304" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34474" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="745" r_length="441" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E737808" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36320" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAG-AACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGA-TGATGAGGAGGAAGAGGAGAAGAAAGAT-GAGGAGGGAAAGGTAG</genome_strand>
        <mrna_strand>GCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATTGATGAGGAGGAAGAGGAGAAGAAAGATGGAGGAGGGAAAGGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204677" ref_strand="+" ref_description="SGN-E204677 [cLEC-14-F1]">
      <seq>ttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatgaggagggaaaggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35008" stop="34175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34708" g_stop="34475" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E204677" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>234</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204677" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34708" e_stop="34475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTA</genome_strand>
        <mrna_strand>TTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281665" ref_strand="+" ref_description="SGN-E281665 [cLER-14-J1]">
      <seq>tcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagacgagaagaaagatgaggagggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35115" stop="34178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34815" g_stop="34478" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E281665" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34815" e_stop="34478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAG</genome_strand>
        <mrna_strand>TCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGACGAGAAGAAAGATGAGGAGGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737737" ref_strand="+" ref_description="SGN-E737737 [LC11AC01]">
      <seq>tcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36608" stop="34188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36308" g_stop="36159" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="292" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34488" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="716" r_length="424" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E737737" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36308" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34488"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGA</genome_strand>
        <mrna_strand>TCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306023" ref_strand="+" ref_description="SGN-E306023 [cLEY-17-N10]">
      <seq>ttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35436" stop="34189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35136" g_stop="35022" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34911" g_stop="34489" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="538" r_length="423" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E306023" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35136" e_stop="35022"/>
          <exon e_start="34911" e_stop="34489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATG</genome_strand>
        <mrna_strand>TTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477949" ref_strand="+" ref_description="SGN-E477949 [cSTD-2-M6]">
      <seq>gtccctttgtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaattacctgggtacaattgccagggcaggaaccaagggagttcatggaagctattggagctggggctgatgttagcatgaatggtcaatttggggttgggttctactctgcttacttggtagctgaaaaaggtattgtggacaccaagcacantgatgatgaacagtatgtctggggagtctaagcccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgaggaggaagaggagaagaaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="193" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="335" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34490" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="759" r_length="424" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E477949" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAA-GGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCT-GGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGAT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATTACCTGGGTACAATTGCCAGGGCAGGAACCAAGGGAGTTCATGGAAGCTATTGGAGCTGGGGCTGATGTTAGCATGAATGGTCAATTTGGGGTTGGGTTCTACTCTGCTTACTTGGTAGCTGAAAAAGGTATTGTGGACACCAAGCACANTGATGATGAACAGTATGTCTGGGGAGTCTAAGCCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554228" ref_strand="+" ref_description="SGN-E554228 [cTSC-3-K10]">
      <seq>ggcacgagggtccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagaaaaggaaatttctgatgatgaggaggaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36642" stop="34203"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36349" g_stop="36159" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="333" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34503" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="742" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E554228" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E554228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36349" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGA</genome_strand>
        <mrna_strand>GGCACGAGGGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAAAAGGAAATTTCTGATGATGAGGAGGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201732" ref_strand="+" ref_description="SGN-E201732 [cLEC-11-A20]">
      <seq>ataacctgggtacaattgcagggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35202" stop="34206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34902" g_stop="34506" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E201732" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34902" e_stop="34506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGA</genome_strand>
        <mrna_strand>ATAACCTGGGTACAATTGCAGGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721084" ref_strand="+" ref_description="SGN-E721084 [FC12CH11]">
      <seq>aatcggccgaattctcttgcattcgagccccttagtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatgaggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36655" stop="34207"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36353" g_stop="36159" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="208" r_length="195" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="350" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34507" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="755" r_length="405" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E721084" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36353" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGG</genome_strand>
        <mrna_strand>CTCTTGCATTCGAGCCCCTTAGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553581" ref_strand="+" ref_description="SGN-E553581 [cTSC-1-J10]">
      <seq>gtgaagcattcccccatactgcttgcttcgaaacgcttgaccctccaaaaaatgtcaggacataaagacgatttgctttccggggtgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgaccagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaaagaagcactctgagttcattagctatcctaattctctgtgggttgagaagaccatagagaaggaaatttctcgatgatgaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36591" stop="34208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36332" g_stop="36159" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.845"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34508" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="724" r_length="406" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E553581" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36332" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTC-GGACGTAGAGACG-TTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATT-AAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCT-GATGATGAGGAG</genome_strand>
        <mrna_strand>GTGAAGCATTCCCCCATACTGCTTGCTTCGAAACGCTTGACCCTCCAAAAAATGTCAGGACATAAAGACGATTTGCTTTCCGGGGTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACCAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAAGAAGCACTCTGAGTTCATTAGCTATCCTAATTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTCGATGATGAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332347" ref_strand="+" ref_description="SGN-E332347 [cTOD-17-J14]">
      <seq>tttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtggggttgagaagaccatagaggaggaaatttctgatgatgagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34509" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="712" r_length="404" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332347" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGT-GGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGA</genome_strand>
        <mrna_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGGTTGAGAAGACCATAGAGGAGGAAATTTCTGATGATGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585090" ref_strand="+" ref_description="SGN-E585090 [66808]">
      <seq>gttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaaggaaatttctgatgatgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35074" stop="34210"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34774" g_stop="34510" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E585090" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34774" e_stop="34510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGG</genome_strand>
        <mrna_strand>GTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318154" ref_strand="+" ref_description="SGN-E318154 [cTOA-29-I5]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttggagaacgtaggctcaagggacctgattagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34511" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="722" r_length="399" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E318154" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAA-GGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGGAGAACGTAGGCTCAAGGGACCTGATT-AGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340235" ref_strand="+" ref_description="SGN-E340235 [cTOF-2-L3]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34512" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="719" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E340235" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGA</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316618" ref_strand="+" ref_description="SGN-E316618 [cTOA-25-P6]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtagggttctactctgcttacttggtagctgagaaagttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctncttcactggtacccaggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagccatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="720" r_length="397" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316618" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGGTTCTACTCTGCTTACTTGGTAGCTGAGAAAGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTNCTTCACTGGTACCCAGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAG-CCATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334433" ref_strand="+" ref_description="SGN-E334433 [cTOD-23-E23]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatccctattctctgtgggttgagaagacatagagaanggaattctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="720" r_length="397" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E334433" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCCTATTCTCTGTGGGTTGAGAAGA-CATAGAGAANGGAA-TTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344107" ref_strand="+" ref_description="SGN-E344107 [cTOF-16-G15]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="722" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E344107" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333535" ref_strand="+" ref_description="SGN-E333535 [cTOD-22-G11]">
      <seq>ccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgatttagaagcactctngagtcattagctatccctattctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36638" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36338" g_stop="36159" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="322" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="719" r_length="397" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E333535" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36338" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTTAGAAGCACTCTNGAGTCATTAGCTATCCCTATTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332607" ref_strand="+" ref_description="SGN-E332607 [cTOD-18-B19]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaagggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="719" r_length="399" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332607" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGGAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344491" ref_strand="+" ref_description="SGN-E344491 [cTOF-14-J3]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="719" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E344491" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322084" ref_strand="+" ref_description="SGN-E322084 [cTOB-29-J13]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgatttagaagcactctgangtcattagctatccctattctctgtggggtgagaagaccatagagaaggaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="717" r_length="399" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E322084" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTTAGAAGCACTCTGANGTCATTAGCTATCCCTATTCTCTGTGGGGTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326164" ref_strand="+" ref_description="SGN-E326164 [cTOC-16-G9]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="715" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E326164" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316969" ref_strand="+" ref_description="SGN-E316969 [cTOA-27-H10]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctattttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="715" r_length="398" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316969" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTA-TTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316985" ref_strand="+" ref_description="SGN-E316985 [cTOA-27-N16]">
      <seq>tgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36631" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36331" g_stop="36159" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="315" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="712" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316985" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36331" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315502" ref_strand="+" ref_description="SGN-E315502 [cTOA-22-J8]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtangggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtggggntgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="711" r_length="398" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E315502" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGT-GGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTANGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGGNTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321895" ref_strand="+" ref_description="SGN-E321895 [cTOB-29-N11]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtanggctcaggacctgattaagaagcactctgagttcattagctatcctatttctctgtggggtgagaagaccatagagaaggaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="712" r_length="399" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E321895" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTA-GGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGGCTC-AGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGGTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316337" ref_strand="+" ref_description="SGN-E316337 [cTOA-25-M19]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtggggtgagaagacatagagaaggaaattctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="710" r_length="397" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316337" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGGTGAGAAGA-CATAGAGAAGGAAA-TTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320358" ref_strand="+" ref_description="SGN-E320358 [cTOB-22-O13]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctnatcctatttctctgtgggttgagaagaccatagagaagggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="713" r_length="400" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E320358" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCT-ATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTNATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGGAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348475" ref_strand="+" ref_description="SGN-E348475 [cTOF-30-E12]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="712" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E348475" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328837" ref_strand="+" ref_description="SGN-E328837 [cTOC-24-I21]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="709" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E328837" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328303" ref_strand="+" ref_description="SGN-E328303 [cTOC-21-P12]">
      <seq>gttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaaattctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36312" g_stop="36159" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="296" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="693" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E328303" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36312" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>GTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGGAAA-TTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487549" ref_strand="+" ref_description="SGN-E487549 [cSTE-25-L18]">
      <seq>gtttcatctcgcctttcagttttcttcgtggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgattttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacgatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctggggacaattgcaaggtcaagaaccaaagagttcatggaagctattgcagctggtgctgatgttagcatgattggacaatttggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctctaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagttcattagctaccctatctctctttgggttgagaagaccatagagaacgaaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="326" r_length="143" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="725" r_length="399" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E487549" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCG-CTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGATTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACGATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGGACAATTGCAAGGTCAAGAACCAAAGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGACAATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCTAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGAGAAGACCATAGAGAACGAAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327368" ref_strand="+" ref_description="SGN-E327368 [cTOC-19-E15]">
      <seq>tcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtanggctcaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36600" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36300" g_stop="36159" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="284" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="680" r_length="396" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E327368" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36300" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTA-GGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCAT-ATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGGCTC-AGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327787" ref_strand="+" ref_description="SGN-E327787 [cTOC-20-H23]">
      <seq>tcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtanggctcaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagacatagagaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36600" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36300" g_stop="36159" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="284" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="680" r_length="396" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E327787" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36300" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTA-GGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCAT-ATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGGCTC-AGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAGAGAAGG-AATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257242" ref_strand="+" ref_description="SGN-E257242 [cLEG-46-C15]">
      <seq>atgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaaggaatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36581" stop="34213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36281" g_stop="36159" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="265" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34513" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="664" r_length="399" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E257242" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36281" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATG</genome_strand>
        <mrna_strand>ATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAAGGAATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332310" ref_strand="+" ref_description="SGN-E332310 [cTOD-17-L3]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcangggacctgattagaagcactctngagtcattagctatcctatttctctgtggggtgagaagacatagagaagggaattctgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34514" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="713" r_length="396" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332310" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAA-GGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGAT</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCANGGGACCTGATT-AGAAGCACTCTNGAGTCATTAGCTATCCTATTTCTCTGTGGGGTGAGAAGA-CATAGAGAAGGGAA-TTCTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343438" ref_strand="+" ref_description="SGN-E343438 [cTOF-19-J1]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34514" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="715" r_length="398" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGAT</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345189" ref_strand="+" ref_description="SGN-E345189 [cTOF-13-E21]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtangctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatttctgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34515" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="720" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E345189" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGA</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215111" ref_strand="+" ref_description="SGN-E215111 [cLEC-78-N19]">
      <seq>cggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatccctattctctgtggggtgagaagaccatagagaanggaatttctgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36577" stop="34215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36277" g_stop="36159" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="261" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34515" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="658" r_length="397" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E215111" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36277" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGA</genome_strand>
        <mrna_strand>CGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCCTATTCTCTGTGGGGTGAGAAGACCATAGAGAANGGAATTTCTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E722901" ref_strand="+" ref_description="SGN-E722901 [FC18CG09]">
      <seq>tcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgaaatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgataggggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaaaaacgtaggctcaaggacctgattaaaaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccataaagaaggaaatttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36600" stop="34218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36300" g_stop="36159" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="284" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34518" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="678" r_length="394" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E722901" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36300" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGA</genome_strand>
        <mrna_strand>TCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAAATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGGGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAAAACGTAGGCTCAAGGACCTGATTAAAAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAAAGAAGGAAATTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339904" ref_strand="+" ref_description="SGN-E339904 [cTOF-3-H15]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctaaggaggatcagcttgaaaccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagagaaggaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34523" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="707" r_length="387" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E339904" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATT</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCT-AAGGAGGATCAGCTTGAA-ACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344058" ref_strand="+" ref_description="SGN-E344058 [cTOF-12-P5]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtangctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtggggttgagaagaccatagagaaggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34524" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="712" r_length="389" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E344058" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGT-GGGTTGAGAAGACCATAGAGAAGGAAAT</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGGTTGAGAAGACCATAGAGAAGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340919" ref_strand="+" ref_description="SGN-E340919 [cTOF-5-O1]">
      <seq>atttcgccttacagttttcttcagctcgttagatctacaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaaagcactctgagtcattagctatcctatttctctgtgggttgagaagaccatagagaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36625" stop="34227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36325" g_stop="36159" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34527" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="693" r_length="385" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E340919" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36325" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAG-AAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGA</genome_strand>
        <mrna_strand>ATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTAC-AAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAAGCACTCTGAG-TCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343756" ref_strand="+" ref_description="SGN-E343756 [cTOF-20-N6]">
      <seq>ttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgagaagaccatagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36623" stop="34232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36323" g_stop="36159" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="307" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34532" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="687" r_length="380" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343756" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36323" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAG</genome_strand>
        <mrna_strand>TTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315589" ref_strand="+" ref_description="SGN-E315589 [cTOA-22-K22]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattggctatcctatttctctgtgggttgagaagacatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34534" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="690" r_length="377" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E315589" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTGGCTATCCTATTTCTCTGTGGGTTGAGAAGA-CATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343769" ref_strand="+" ref_description="SGN-E343769 [cTOF-12-A21]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="321" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34543" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="690" r_length="369" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343769" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTAC-AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGA</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210374" ref_strand="+" ref_description="SGN-E210374 [cLEC-35-D8]">
      <seq>cgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtangctcaaggacctgattaagaagcactctgagttcattagctatcctatttctctgtgggttgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35431" stop="34243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35131" g_stop="35022" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34911" g_stop="34543" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="479" r_length="369" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E210374" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35131" e_stop="35022"/>
          <exon e_start="34911" e_stop="34543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGA</genome_strand>
        <mrna_strand>CGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583990" ref_strand="+" ref_description="SGN-E583990 [9811]">
      <seq>gtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcaccaggtatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcagggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttatcaagaagcactctgagttcattagctaccctatctctctttgggttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35068" stop="34245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34768" g_stop="34545" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E583990" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>224</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34768" e_stop="34545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGA</genome_strand>
        <mrna_strand>GTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGTATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAGGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATCAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTTTGGGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408787" ref_strand="+" ref_description="SGN-E408787 [PPI-12-O11]">
      <seq>gtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagacttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcgaccagagctcttcgtccatattatcccagacgagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccagggagatcgtggaagctattgcagctggtgctgatgttagcatgattggtcgatttggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccaggataatctggtgatgagaaccctggcatgggtaccgaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcactctgagatcattagctaccctatctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34553" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="685" r_length="360" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E408787" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCT-G-G-TGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGACTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCGACCAGAGCTCTTCGTCCATATTATCCCAGACGAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAGGGAGATCGTGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCGATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCA-GGATA-ATCTGGTGATGAGAACCCTGGCATGGGTACCGAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCACTCTGAGATCATTAGCTACCCTATCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309136" ref_strand="+" ref_description="SGN-E309136 [cLEZ-1-K15]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaagctcaaggacctgattaagaagcactctgagttcattagctatcctatttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34554" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="678" r_length="358" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E309136" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCT</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAAGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334570" ref_strand="+" ref_description="SGN-E334570 [cTOD-23-E11]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34554" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="671" r_length="358" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E334570" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCT</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439439" ref_strand="+" ref_description="SGN-E439439 [cSTA-12-K13]">
      <seq>tttttggtttcttttctgcttacttggtagctgagaaggttatggtgaccactaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgaaaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtatgctcaaggaccttattaagaagcactctgagttcattagctaccctatctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35111" stop="34255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34812" g_stop="34555" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E439439" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>258</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34812" e_stop="34555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTC</genome_strand>
        <mrna_strand>TTTTTGGTTTCTTTTCTGCTTACTTGGTAGCTGAGAAGGTTATGGTGACCACTAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAAAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTATGCTCAAGGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340266" ref_strand="+" ref_description="SGN-E340266 [cTOF-2-J18]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcctatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34556" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="679" r_length="356" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E340266" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211371" ref_strand="+" ref_description="SGN-E211371 [cLEC-67-C13]">
      <seq>tttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaagaccctgattagaagcactctgagttcattagctatcctatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36610" stop="34256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36310" g_stop="36159" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="294" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34556" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="650" r_length="356" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E211371" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36310" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGA-CCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</genome_strand>
        <mrna_strand>TTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAAGACCCTGATT-AGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247078" ref_strand="+" ref_description="SGN-E247078 [cLEF-41-B10]">
      <seq>ctttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaagctcaaggacctgattaagaagcactctgagttcattagctatcctatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36514" stop="34256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36214" g_stop="36159" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="198" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34556" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="554" r_length="356" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E247078" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36214" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</genome_strand>
        <mrna_strand>CTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAAGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482592" ref_strand="+" ref_description="SGN-E482592 [cSTE-1-A13]">
      <seq>cttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtggttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctggggagtctcaagccggtggctctttcactgtcaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctctatctcagggaggatcagcttgaataccttgaagaacgtaggctcaaggaccttattaagaagcctnctgagttcattagctaccctatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36318" g_stop="36159" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="302" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34557" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="659" r_length="357" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482592" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36318" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGT-GTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCT-GGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTC</genome_strand>
        <mrna_strand>CTTCTTGGTAGCAACAGCTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTCTATCTCAGGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTTATTAAGAAGCCTNCTGAGTTCATTAGCTACCCTATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487804" ref_strand="+" ref_description="SGN-E487804 [cSTE-26-L3]">
      <seq>gtttcatctcgcctttcagttgtcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgcgtacaattgcaaggtcaggaaccaaagagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgctggtttctactctgcttacttggtagctgagaatggtattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctncagccggtggctctatcactgtcaccagagatacatctggtgagaaccttggcaggagtaccaaaatggtcctttatctcaaggacgatcagcttgaatagcttgaagaacgtacgctcaacgaccttattaagaagcactctgagttcattagctaccctatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34557" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="680" r_length="355" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E487804" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGCGTACAATTGCAAGGTCAGGAACCAAAGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGCTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAATGGTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTNCAGCCGGTGGCTCTATCACTGTCACCAGAGATACATCTGGTGAGAACCTTGGCAGGAGTACCAAAATGGTCCTTTATCTCAAGGACGATCAGCTTGAATAGCTTGAAGAACGTACGCTCAACGACCTTATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332394" ref_strand="+" ref_description="SGN-E332394 [cTOD-17-O3]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtacaaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaagacctgattaagaagcactctgagttcattagctatcctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34559" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="673" r_length="353" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332394" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATT</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACAAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAAGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477686" ref_strand="+" ref_description="SGN-E477686 [cSTD-1-M12]">
      <seq>gtccctttgtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaacanaggagttcatggaagctattgcggctggtgctgatgttagcatgattggtcaatttggtggttggtttctactctgctatcttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctcttncactgttaccagggatacttctggtgagaaccttggnaggggtaccaaaatggtcctttatctcagggaggatcagcttgaataccttgaagaaacgtagctcaaggaccttattaagaagcttnctgagttcattagctacccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="193" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="335" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34561" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="687" r_length="352" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E477686" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGT-GTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAG-AACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTA</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACANAGGAGTTCATGGAAGCTATTGCGGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGGTTGGTTTCTACTCTGCTATCTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTNCACTGTTACCAGGGATACTTCTGGTGAGAACCTTGGNAGGGGTACCAAAATGGTCCTTTATCTCAGGGAGGATCAGCTTGAATACCTTGAAGAAACGTA-GCTCAAGGACCTTATTAAGAAGCTTNCTGAGTTCATTAGCTACCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345755" ref_strand="+" ref_description="SGN-E345755 [cTOF-18-C9]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34562" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="669" r_length="350" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E345755" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCT</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343126" ref_strand="+" ref_description="SGN-E343126 [cTOF-17-G2]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcagggaggatcagcttgaataccttgaagaacgtaggctcaaggacctgattaagaagcactctgagttcattagctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34563" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="669" r_length="349" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E343126" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCC</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAGGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338734" ref_strand="+" ref_description="SGN-E338734 [cTOE-21-A4]">
      <seq>agtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtangctcaaggacctgattaagaagcactctgagttcattagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35346" stop="34268"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35046" g_stop="35022" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34911" g_stop="34568" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="369" r_length="344" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E338734" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35046" e_stop="35022"/>
          <exon e_start="34911" e_stop="34568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGC</genome_strand>
        <mrna_strand>AGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTANGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579809" ref_strand="+" ref_description="SGN-E579809 [86942]">
      <seq>gtttcatctcgcctttcagttttcttcttggtagcaacagctctttaatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttgggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagcggatacatctggtgagaaccttggcaggcgtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcaaagaccttatttagaagcactctgagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36293" g_stop="36159" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="182" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="324" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34575" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="663" r_length="339" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E579809" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36293" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAA-TTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAG-GGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTT</genome_strand>
        <mrna_strand>ATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGCGGATACATCTGGTGAGAACCTTGGCAGGCGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAAGACCTTATTTAGAAGCACTCTGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345406" ref_strand="+" ref_description="SGN-E345406 [cTOF-13-B1]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcacgaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagtgatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagcacgtaggctcaacgacctgattaagaagcactctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34578" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="647" r_length="334" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E345406" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGA</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCACGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGTGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGCACGTAGGCTCAACGACCTGATTAAGAAGCACTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706810" ref_strand="+" ref_description="SGN-E706810 [FA31AA05]">
      <seq>acgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtaggctcacggacctgattaagaagcactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36566" stop="34280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36266" g_stop="36159" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="250" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34580" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="582" r_length="332" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E706810" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36266" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCT</genome_strand>
        <mrna_strand>ACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCACGGACCTGATTAAGAAGCACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323162" ref_strand="+" ref_description="SGN-E323162 [cTOB-28-L12]">
      <seq>agatggtcgaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcgacgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttgaagaacgtatgctcaaggacctgattaagaagcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35416" stop="34282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35116" g_stop="35022" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34911" g_stop="34582" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="425" r_length="330" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323162" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35116" e_stop="35022"/>
          <exon e_start="34911" e_stop="34582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACT</genome_strand>
        <mrna_strand>AGATGGTCGACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGACGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTATGCTCAAGGACCTGATTAAGAAGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316407" ref_strand="+" ref_description="SGN-E316407 [cTOA-25-H9]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34617" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="615" r_length="295" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316407" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316538" ref_strand="+" ref_description="SGN-E316538 [cTOA-25-O10]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaataccttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34617" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="614" r_length="295" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E316538" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409750" ref_strand="+" ref_description="SGN-E409750 [PPI-14-P24]">
      <seq>gtccctttgtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttnggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="193" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="335" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34617" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="631" r_length="296" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E409750" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAA-TTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTNGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445050" ref_strand="+" ref_description="SGN-E445050 [cSTA-44-F9]">
      <seq>aaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgagaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagaggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggacaatttggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccactgagcacaatgatgatgaacagtctgtctgggagtctcaagccggtggctctgtcactgttaccagagatacatctggtgaaaaccttggcaggggtaccaaaatggtcctttatctaaggaggatcagccttgataccttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36584" stop="34317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36284" g_stop="36159" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="268" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34617" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="562" r_length="294" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E445050" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36284" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGA</genome_strand>
        <mrna_strand>AAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGAGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGAGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGACAATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACTGAGCACAATGATGATGAACAGTCTGTCTGGGAGTCTCAAGCCGGTGGCTCTGTCACTGTTACCAGAGATACATCTGGTGAAAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCT-AAGGAGGATCAGCCTTGATACCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214555" ref_strand="+" ref_description="SGN-E214555 [cLEC-79-F13]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaagaggatcagcttgaataccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34618" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="606" r_length="294" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E214555" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTG</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAAGAGGATCAGCTTGAATACCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483065" ref_strand="+" ref_description="SGN-E483065 [cSTE-7-H14]">
      <seq>tgtcggacctagagccgtttgctttccaggctgagctgaatcagcttctcagtcttcttatcaacactttctacagcaacaaggagctctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtngttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctggggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcaaggaggatcagcttgaataccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36580" stop="34318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36280" g_stop="36159" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="264" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34618" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="560" r_length="296" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E483065" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36280" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGT-GTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCT-GGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTG</genome_strand>
        <mrna_strand>TGTCGGACCTAGAGCCGTTTGCTTTCCAGGCTGAGCTGAATCAGCTTCTCAGTCTTCTTATCAACACTTTCTACAGCAACAAGGAGCTCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTNGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710511" ref_strand="+" ref_description="SGN-E710511 [FA55CF11]">
      <seq>ccctttttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcagtgtaggtttctactctgcttacttggtagctgacaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggcaccaagatggtcctttatctccaggagggatcagcttgaatacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36340" g_stop="36159" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="324" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34619" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="618" r_length="294" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E710511" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36340" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGA-GGATCAGCTTGAATACCTT</genome_strand>
        <mrna_strand>CCCTTTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCAGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGACAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGCACCAAGATGGTCCTTTATCTCCAGGAGGGATCAGCTTGAATACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332500" ref_strand="+" ref_description="SGN-E332500 [cTOD-17-L4]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctncaggaggatcagcttgaatacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34619" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="610" r_length="293" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E332500" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTT</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTNCAGGAGGATCAGCTTGAATACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315177" ref_strand="+" ref_description="SGN-E315177 [cTOA-24-P11]">
      <seq>aaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaagtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaatacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36587" stop="34319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36287" g_stop="36159" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="271" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34619" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="564" r_length="293" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E315177" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36287" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTT</genome_strand>
        <mrna_strand>AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAAGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207716" ref_strand="+" ref_description="SGN-E207716 [cLEC-32-G13]">
      <seq>gaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagatggtcctttatctcaaggaggatcagcttgaatacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36482" stop="34319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36182" g_stop="36159" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="166" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34619" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="459" r_length="293" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E207716" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36182" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTT</genome_strand>
        <mrna_strand>GAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328595" ref_strand="+" ref_description="SGN-E328595 [cTOC-23-L1]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaagatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttggtgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtacgggtaccaagatggtcctttatctcaatgaggatcagcttgaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34622" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="602" r_length="290" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E328595" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATAC</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAGATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGGTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTACGGGTACCAAGATGGTCCTTTATCTCAATGAGGATCAGCTTGAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211370" ref_strand="+" ref_description="SGN-E211370 [cLEC-67-C11]">
      <seq>tttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaagggtaccaagatggtcctttatctcaaggaggatcagcttgaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36610" stop="34322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36310" g_stop="36159" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="294" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34622" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="584" r_length="290" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E211370" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36310" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATAC</genome_strand>
        <mrna_strand>TTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAAGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482663" ref_strand="+" ref_description="SGN-E482663 [cSTE-1-M19]">
      <seq>gtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtggttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcaccagggatacatctggtgagaaccttggcaggggtaccaaaatggtcctttatctcagggaggatcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34630" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="608" r_length="283" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482663" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGT-GTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGGTCCTTTATCTCAGGGAGGATCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330551" ref_strand="+" ref_description="SGN-E330551 [cTOD-8-C8]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgtttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtttcaagccggtggctctttcactggtaccagggatacatctggtgagaaccttgggagggggtccaagatggtcctttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34645" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="580" r_length="267" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E330551" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATC</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGTTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTTTCAAGCCGGTGGCTCTTTCACTGGTACCAGGGATACATCTGGTGAGAACCTTGGGAGGGGGTCCAAGATGGTCCTTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269911" ref_strand="+" ref_description="SGN-E269911 [cLEM-7-A17]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtaccaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34656" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="569" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E269911" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGAT</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329264" ref_strand="+" ref_description="SGN-E329264 [cTOD-2-F22]">
      <seq>ttccatttctccttacagttttcttcagctggttagaggtacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctttttcactgttaccagggatacatctggtgagaaccttggtaggggtacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34660" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="565" r_length="252" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E329264" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCA</genome_strand>
        <mrna_strand>TTCCATTTCTCCTTACAGTTTTCTTCAGCTGGTTAGAGGTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTTTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244995" ref_strand="+" ref_description="SGN-E244995 [cLEF-2-B22]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccgggggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34660" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="564" r_length="252" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E244995" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244995" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCA</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGGGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302918" ref_strand="+" ref_description="SGN-E302918 [cLEW-26-K14]">
      <seq>ttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36611" stop="34362"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36311" g_stop="36159" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="295" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34662" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="545" r_length="250" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E302918" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36311" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</genome_strand>
        <mrna_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300947" ref_strand="+" ref_description="SGN-E300947 [cLEW-8-I12]">
      <seq>ttgagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttgcaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggggaataacctgggtacaattgcaaggtcaggaaccaaggagttcatgggagctcttgcagctggtgctgatgttagcatgattggtcaattcggtggaggtttctactctgcttacttggtagctgaaaaggttgttgtgaccacaaagcacagtgaggatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36606" stop="34362"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36306" g_stop="36159" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="290" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34662" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="540" r_length="250" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E300947" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36306" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</genome_strand>
        <mrna_strand>TTGAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTGCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGGGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGGAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGGAGGTTTCTACTCTGCTTACTTGGTAGCTGAAAAGGTTGTTGTGACCACAAAGCACAGTGAGGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312624" ref_strand="+" ref_description="SGN-E312624 [cLEZ-20-L15]">
      <seq>ctcgctagatctacaaaaaaatgtcggacgtagagacgtgtgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgcgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36601" stop="34362"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="285" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34662" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="535" r_length="250" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E312624" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</genome_strand>
        <mrna_strand>CTCGCTAGATCTACAAAAAAATGTCGGACGTAGAGACGTGTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGCGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305919" ref_strand="+" ref_description="SGN-E305919 [cLEY-17-H8]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="564" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E305919" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325433" ref_strand="+" ref_description="SGN-E325433 [cTOC-1-F11]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="564" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E325433" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319417" ref_strand="+" ref_description="SGN-E319417 [cTOB-15-H23]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="563" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E319417" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325214" ref_strand="+" ref_description="SGN-E325214 [cTOC-1-I11]">
      <seq>tgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36631" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36331" g_stop="36159" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="315" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="561" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E325214" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36331" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329625" ref_strand="+" ref_description="SGN-E329625 [cTOD-3-C16]">
      <seq>ttccatttcgccttacagtttgcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="559" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E329625" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTGCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323406" ref_strand="+" ref_description="SGN-E323406 [cTOC-7-I11]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtgcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="559" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323406" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGT-CGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTGCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300203" ref_strand="+" ref_description="SGN-E300203 [cLEW-17-A10]">
      <seq>ttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36611" stop="34366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36311" g_stop="36159" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="295" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34666" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="541" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E300203" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36311" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</genome_strand>
        <mrna_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329337" ref_strand="+" ref_description="SGN-E329337 [cTOD-2-D14]">
      <seq>tcttgcattcgagtccctttgtgttccattgcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgacagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36652" stop="34369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36352" g_stop="36159" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="336" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34669" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="579" r_length="243" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E329337" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36352" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTA</genome_strand>
        <mrna_strand>TCTTGCATTCGAGTCCCTTTGTGTTCCATTGCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGACAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297467" ref_strand="+" ref_description="SGN-E297467 [cLEW-13-D12]">
      <seq>ccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtctagtctcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaaccttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36627" stop="34370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36327" g_stop="36159" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="310" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34670" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="552" r_length="242" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E297467" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36327" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGT</genome_strand>
        <mrna_strand>CCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTAGTC-TCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247548" ref_strand="+" ref_description="SGN-E247548 [cLEF-42-K24]">
      <seq>tttgtgttccatttcgccttacagttttgttcagctcggtagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34675" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="556" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E247548" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACC</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTGTTCAGCTCGGTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267541" ref_strand="+" ref_description="SGN-E267541 [cLEI-8-O17]">
      <seq>ttgcttttcaggctgagatcaatcagcttctcaggcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgtgtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttactgggtagctganaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgagaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36562" stop="34375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36262" g_stop="36159" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="246" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34675" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="483" r_length="237" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267541" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36262" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACC</genome_strand>
        <mrna_strand>TTGCTTTTCAGGCTGAGATCAATCAGCTTCTCAGGCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGTGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTGGGTAGCTGANAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439149" ref_strand="+" ref_description="SGN-E439149 [cSTA-11-I13]">
      <seq>gttacatctcgcctttcacttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcaacaattcttccgatgctctatacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgctggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34676" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="561" r_length="236" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E439149" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAAC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAACAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTATACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGCTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326327" ref_strand="+" ref_description="SGN-E326327 [cTOC-14-O20]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34678" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="554" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E326327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGA</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299566" ref_strand="+" ref_description="SGN-E299566 [cLEW-20-M4]">
      <seq>catttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctggtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36626" stop="34379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36326" g_stop="36159" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="310" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34679" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="543" r_length="233" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E299566" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36326" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAG</genome_strand>
        <mrna_strand>CATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483061" ref_strand="+" ref_description="SGN-E483061 [cSTE-7-F24]">
      <seq>cgtttgcctttccggctgagatcaatcagcttctcagtcttactcatcacactttctacagcaacaaggagactctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgnttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagntatgtctgggagtctcaagccggtggctctttcactgtcaccagggatacatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36565" stop="34383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36265" g_stop="36159" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="250" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34683" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="481" r_length="231" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E483061" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36265" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34683"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTA-TCATCAACACTTTCTACAGCAACAAGGAGA-TCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTG-TAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCA-ATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGG</genome_strand>
        <mrna_strand>CGTTTGCCTTTCCGGCTGAGATCAATCAGCTTCTCAGTCTTACTCATC-ACACTTTCTACAGCAACAAGGAGACTCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGNTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGNTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACCAGGGATACATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314587" ref_strand="+" ref_description="SGN-E314587 [cTOA-20-I10]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctncagccggtggctctttcactgttaccagggatacatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34384"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34684" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="548" r_length="228" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E314587" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTNCAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312398" ref_strand="+" ref_description="SGN-E312398 [cTOA-5-J2]">
      <seq>tttcgccttacagttttcttcagctcgttagatctacggaaaaatgggggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34384"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34684" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="536" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E312398" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTG</genome_strand>
        <mrna_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACGGAAAAATGGGGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272333" ref_strand="+" ref_description="SGN-E272333 [cLEM-19-L8]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggatacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34686" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="549" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E272333" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATC</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324417" ref_strand="+" ref_description="SGN-E324417 [cTOC-6-A11]">
      <seq>tttgtgttccatttcgccttacaggtatcttcagctcggtagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctgcgggaactcatgagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatgcatattattccagacaaggccaataatactctcactatcattgatagtggtattggtgtgacaaaggctgatctggtgaatcacctgcgtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggcgtagggttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggaggctctttcactgttaccagggataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34688" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="543" r_length="224" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E324417" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACA</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGGTATCTTCAGCTCGGTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTGCGGGAACTCATGAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATGCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTGTGACAAAGGCTG..............................................................................................................ATCTGGTGAATCACCTGCGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGCGTAGGGTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGAGGCTCTTTCACTGTTACCAGGGATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299740" ref_strand="+" ref_description="SGN-E299740 [cLEW-1-H6]">
      <seq>ttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36597" stop="34388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36297" g_stop="36159" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="281" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34688" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="505" r_length="224" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E299740" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36297" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACA</genome_strand>
        <mrna_strand>TTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313540" ref_strand="+" ref_description="SGN-E313540 [cTOA-12-K6]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccagggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34690" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="534" r_length="222" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E313540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATA</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301633" ref_strand="+" ref_description="SGN-E301633 [cLEW-23-M1]">
      <seq>tttcgccttacagttttcttcagctcgggggatctacaaaaaaatgtggggcgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactgttaccaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34692" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="528" r_length="220" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301633" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGA</genome_strand>
        <mrna_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGGGGGATCTACAAAAAAATGTGGGGCGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483555" ref_strand="+" ref_description="SGN-E483555 [cSTE-9-L18]">
      <seq>ctttgtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctagtctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgttggattctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcactgtcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="189" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="331" r_length="142" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34697" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="546" r_length="215" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E483555" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTA..............................................................................................................GTCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGTTGGATTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322872" ref_strand="+" ref_description="SGN-E322872 [cTOB-30-J6]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaagggcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaagggtgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcactggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34698" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="537" r_length="214" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E322872" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTAC</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGGCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGGTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247959" ref_strand="+" ref_description="SGN-E247959 [cLEF-47-N2]">
      <seq>ccctttgtgttccatttcgccttacagttttcttcagggcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36638" stop="34403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36338" g_stop="36159" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="322" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34703" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="531" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E247959" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36338" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</genome_strand>
        <mrna_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGGGCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314736" ref_strand="+" ref_description="SGN-E314736 [cTOA-20-E6]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagncatatgtctgggagtctcaagccggtggctctttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34703" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="529" r_length="209" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E314736" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGNCATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207998" ref_strand="+" ref_description="SGN-E207998 [cLEC-34-N12]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34703" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="528" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E207998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337760" ref_strand="+" ref_description="SGN-E337760 [cTOE-17-F1]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccggtggctctttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34703" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="522" r_length="209" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337760" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473822" ref_strand="+" ref_description="SGN-E473822 [cSTB-33-L6]">
      <seq>tttgtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattgggcaattgggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccggtggctctttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="188" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="330" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34703" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="539" r_length="209" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473822" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGGCAATTGGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333925" ref_strand="+" ref_description="SGN-E333925 [cTOD-24-B9]">
      <seq>tttgtgttccatttcgccttacaggtttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcgaggacaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggcgtacgtttctactctgcatacttggtagctgagaaggatgttgtgaccacnaatcaccatgatgatgagcaatatgtctgggagtctcaagacggtggctctttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34704" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="527" r_length="208" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E333925" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCAC</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGGTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCGAGGACAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGCGTACGTTTCTACTCTGCATACTTGGTAGCTGAGAAGGATGTTGTGACCACNAATCACCATGATGATGAGCAATATGTCTGGGAGTCTCAAGACGGTGGCTCTTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342663" ref_strand="+" ref_description="SGN-E342663 [cTOF-7-N7]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagccatatgtctgggagtctcaagccggtggctctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34705" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="527" r_length="207" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E342663" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCA</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCCATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445052" ref_strand="+" ref_description="SGN-E445052 [cSTA-44-F11]">
      <seq>aaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaattgggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36584" stop="34416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36284" g_stop="36159" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="268" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34716" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="464" r_length="196" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E445052" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36284" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGG</genome_strand>
        <mrna_strand>AAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTGGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266982" ref_strand="+" ref_description="SGN-E266982 [cLEI-7-F2]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34717" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="513" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E266982" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCG</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478951" ref_strand="+" ref_description="SGN-E478951 [cSTD-7-H6]">
      <seq>gtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaanttgcaggtcaggaaccaagggagtcatggaagctattgcagctggtgctgatgttagcatgattggtcatttggtggtggtttctactctgcttacttggtagctgagaaggntattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="185" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="327" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34717" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="521" r_length="194" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E478951" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAA-TTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAANTTGC-AGGTCAGGAACCAAGGGAGTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTC-ATTTGGTGGTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGNTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299666" ref_strand="+" ref_description="SGN-E299666 [cLEW-1-K17]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34718" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="514" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E299666" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331247" ref_strand="+" ref_description="SGN-E331247 [cTOD-6-O18]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34718" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="513" r_length="194" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E331247" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247892" ref_strand="+" ref_description="SGN-E247892 [cLEF-47-B15]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34718" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="513" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E247892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331624" ref_strand="+" ref_description="SGN-E331624 [cTOD-7-I1]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34718" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="507" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E331624" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E288403" ref_strand="+" ref_description="SGN-E288403 [cLES-16-H15]">
      <seq>tcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36622" stop="34418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36322" g_stop="36159" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="306" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34718" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="500" r_length="194" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E288403" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36322" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</genome_strand>
        <mrna_strand>TCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269523" ref_strand="+" ref_description="SGN-E269523 [cLEM-2-C13]">
      <seq>ctcgtgccgatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36630" stop="34419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34719" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="511" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E269523" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGC</genome_strand>
        <mrna_strand>CTCGTG-CCGATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268476" ref_strand="+" ref_description="SGN-E268476 [cLEI-13-A17]">
      <seq>ttgtgttccatttcgccttacagtgttcttcagcgggttagatctacaaaaaaatgtcggacgtagagacgtttgctttccatgctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcgattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatgcatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacattgatgatgagcgatatgtctgggagtctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34719" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="511" r_length="193" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268476" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGC</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTGTTCTTCAGCGGGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCATGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCGATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATGCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACATTGATGATGAGCGATATGTCTGGGAGTCTCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477272" ref_strand="+" ref_description="SGN-E477272 [cSTB-47-P5]">
      <seq>cctttgtgtttcatctcgcctttcagatttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgggaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgaccagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaacgagttcatggaagctattgcagctggtgctgatgttaacatgattggtcaatttggtgatggtttctactctgcttacttggtagctgagaacgttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="190" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="332" r_length="142" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34719" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="525" r_length="193" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E477272" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGGGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACCAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAACGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAACATGATTGGTCAATTTGGTGATGGTTTCTACTCTGCTTACTTGGTAGCTGAGAACGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300195" ref_strand="+" ref_description="SGN-E300195 [cLEW-17-M21]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaagtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34720" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="505" r_length="192" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E300195" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAAGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473811" ref_strand="+" ref_description="SGN-E473811 [cSTB-33-J6]">
      <seq>gtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatggtaacatgattggtcaattgggtgttggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34720" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="517" r_length="192" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473811" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGGTAACATGATTGGTCAATTGGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267870" ref_strand="+" ref_description="SGN-E267870 [cLEI-12-O16]">
      <seq>aaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36587" stop="34420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36287" g_stop="36159" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="271" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34720" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="463" r_length="192" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267870" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36287" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAG</genome_strand>
        <mrna_strand>AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301860" ref_strand="+" ref_description="SGN-E301860 [cLEW-25-M1]">
      <seq>gtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaaggtgggacgtacagacgcttgctttccaggctgagatcaatcagctgctcagtcttatcatcaacactttctacagcagcagggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaacgttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36632" stop="34422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36332" g_stop="36159" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="316" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34722" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="506" r_length="190" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301860" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36332" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCA</genome_strand>
        <mrna_strand>GTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAAGGTGGGACGTACAGACGCTTGCTTTCCAGGCTGAGATCAATCAGCTGCTCAGTCTTATCATCAACACTTTCTACAGCAGCAGGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAACGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245171" ref_strand="+" ref_description="SGN-E245171 [cLEF-13-K14]">
      <seq>ctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36591" stop="34422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36291" g_stop="36159" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="275" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34722" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="465" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E245171" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36291" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCA</genome_strand>
        <mrna_strand>CTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314724" ref_strand="+" ref_description="SGN-E314724 [cTOA-20-A4]">
      <seq>agtccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36641" stop="34423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36341" g_stop="36159" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34723" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="514" r_length="189" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E314724" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36341" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</genome_strand>
        <mrna_strand>AGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337265" ref_strand="+" ref_description="SGN-E337265 [cTOE-7-D13]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34723" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="508" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337265" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478640" ref_strand="+" ref_description="SGN-E478640 [cSTD-6-E18]">
      <seq>gtgtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgttgggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="185" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="327" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34723" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="517" r_length="190" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E478640" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTG-TAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGTTGGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583764" ref_strand="+" ref_description="SGN-E583764 [9585]">
      <seq>aaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtggaactcatcagcaattcttccgatgctctagagaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatcccatattatcccgagacaagaccaacaatactctcactatcattgatagtggtcatccggtatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagtgcatggaagctattgcagctggtgctgatgttagcatgattggtcaatctggtgtcggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36587" stop="34423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36287" g_stop="36159" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="276" r_length="146" r_score="0.887"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.85"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34723" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="465" r_length="189" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E583764" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36287" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGT-GAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCAT-CCATATTATTCC-AGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGT-AT-TGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTC</genome_strand>
        <mrna_strand>AAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGAGAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCCATATTATCCCGAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTCATCCGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTGCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATCTGGTGTCGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209287" ref_strand="+" ref_description="SGN-E209287 [cLEC-53-F19]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggagtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34724" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="508" r_length="188" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E209287" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCT</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482276" ref_strand="+" ref_description="SGN-E482276 [cSTD-21-L5]">
      <seq>atctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccacattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtggtggtttctactctgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="178" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34726" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="506" r_length="186" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E482276" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482276" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCACATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGGTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246883" ref_strand="+" ref_description="SGN-E246883 [cLEF-41-F13]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagaggtacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccgataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34727" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="502" r_length="185" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E246883" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAG</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGAGGTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCGATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442572" ref_strand="+" ref_description="SGN-E442572 [cSTA-34-E3]">
      <seq>ctttgtgtttcatctcgcctttcagttgttttcttggtagcaacaggtctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggcatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgataggacaattcggtgttggctgctactgtgcttacttggtagctgagaaggttattgtgaccacaaagcacaatgatgatgaacagtatgtctgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="189" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="331" r_length="142" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34727" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="516" r_length="185" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E442572" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAG</genome_strand>
        <mrna_strand>GTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGCATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATAGGACAATTCGGTGTTGGCTGCTACTGTGCTTACTTGGTAGCTGAGAAGGTTATTGTGACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334610" ref_strand="+" ref_description="SGN-E334610 [cTOD-23-E2]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatgtctggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34729" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="496" r_length="183" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E334610" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314662" ref_strand="+" ref_description="SGN-E314662 [cTOA-20-H4]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaagttgttgtgaccacnaagcacaatgatgatgagcaatatgtctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34730" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="502" r_length="182" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E314662" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAAGTTGTTGTGACCACNAAGCACAATGATGATGAGCAATATGTCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313078" ref_strand="+" ref_description="SGN-E313078 [cTOA-14-L19]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34735" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="495" r_length="177" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E313078" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTAC-AAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323846" ref_strand="+" ref_description="SGN-E323846 [cTOC-5-L3]">
      <seq>ttccatttcgccttacagttttcttcagctggttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaatacggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagcaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34735" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="490" r_length="177" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323846" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATG</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTGGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATACGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473623" ref_strand="+" ref_description="SGN-E473623 [cSTB-33-E6]">
      <seq>gtgaactcatcagcagttcttccgatgctctagacaagacccgggttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaagggcaggaaccaaggagttcatggaagctattgcagatggtgctgatgttagcatgattggtcaatttggtgttggcttctactctgcttacttggtagctgagaagggtattgtgaccacaaagctcaatgatgatgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="35465" stop="34440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="168" r_length="142" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34911" g_stop="34740" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="340" r_length="172" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473623" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCA</genome_strand>
        <mrna_strand>GCTCTAGACAAGACCCGGGTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGGCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGATGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGTTGGCTTCTACTCTGCTTACTTGGTAGCTGAGAAGGGTATTGTGACCACAAAGCTCAATGATGATGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303836" ref_strand="+" ref_description="SGN-E303836 [cLEX-4-L18]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34741" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="494" r_length="171" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303836" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGC</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337101" ref_strand="+" ref_description="SGN-E337101 [cTOE-7-K2]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34741" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="484" r_length="171" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337101" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGC</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329168" ref_strand="+" ref_description="SGN-E329168 [cTOD-2-M22]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctggttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34742" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="490" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E329168" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34742"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTGGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310428" ref_strand="+" ref_description="SGN-E310428 [cTOA-10-G18]">
      <seq>tccctttgtgttccatttcgccttacagatttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggggaataacctgtgtacaattgcaaggtcaggaaccaaggagttcatgggagctcttgcagctggtgctgatgttagcatgattggtcaattccgaggaggtttctactctgcttacttggtagctgagaaggttgttgtgaccacaaagcacaatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34744" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="491" r_length="168" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E310428" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGATTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGGGAATAACCTGTGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGGAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCCGAGGAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554310" ref_strand="+" ref_description="SGN-E554310 [cTSC-3-O13]">
      <seq>ccaatttcgccttacagttttcttcaactcgttagatctacataaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtatgggtatgacaaaggctgatctggtgaataacctgggtacaattggcaaggtcagggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaagtttctactctgctcacttggtagctgagaaggttgttgtgaccacaaagcacaatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36627" stop="34446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34746" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="480" r_length="168" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E554310" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E554310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATT-GCAAGGTCA-GGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGA</genome_strand>
        <mrna_strand>CCAATTTCGCCTTACAGTTTTCTTCAACTCGTTAGATCTACATAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATGGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGGCAAGGTCAGGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAAGTTTCTACTCTGCTCACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484008" ref_strand="+" ref_description="SGN-E484008 [cSTE-11-B24]">
      <seq>ttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttggtgtttggtttctactctgcttacttggtagctgagaagggttattgtgaccacaaagcacaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36512" stop="34447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36212" g_stop="36159" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="196" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34747" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="363" r_length="167" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E484008" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36212" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTG-TAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAA-GGTTGTTGTGACCACAAAGCACAATGATG</genome_strand>
        <mrna_strand>TTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTGGTGTTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGGTTATTGTGACCACAAAGCACAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243313" ref_strand="+" ref_description="SGN-E243313 [cLEF-12-J9]">
      <seq>tcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36544" stop="34477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36244" g_stop="36159" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="228" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34777" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="363" r_length="135" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E243313" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36244" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGA</genome_strand>
        <mrna_strand>TCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269901" ref_strand="+" ref_description="SGN-E269901 [cLEM-17-L18]">
      <seq>tccctttgtgttccatttcgccttacagtttggttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaagtttctactctgcttacttggtagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34779" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="456" r_length="133" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E269901" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGA</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTGGTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAAGTTTCTACTCTGCTTACTTGGTAGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E282024" ref_strand="+" ref_description="SGN-E282024 [cLES-2-J7]">
      <seq>tcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36605" stop="34480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36305" g_stop="36159" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="289" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34780" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="421" r_length="132" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E282024" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36305" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTG</genome_strand>
        <mrna_strand>TCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324950" ref_strand="+" ref_description="SGN-E324950 [cTOC-11-O2]">
      <seq>gttagatctacacaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttgtcaaccttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36598" stop="34480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36298" g_stop="36159" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="282" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34780" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="414" r_length="132" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E324950" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36298" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTG</genome_strand>
        <mrna_strand>GTTAGATCTACACAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTGTCAACCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323322" ref_strand="+" ref_description="SGN-E323322 [cTOC-10-A13]">
      <seq>catttcgccttacagttttcttcanctcgggagatctagagaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttggtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36626" stop="34481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36326" g_stop="36159" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="310" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34781" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="441" r_length="131" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E323322" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36326" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCT</genome_strand>
        <mrna_strand>CATTTCGCCTTACAGTTTTCTTCANCTCGGGAGATCTAGAGAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399944" ref_strand="+" ref_description="SGN-E399944 [cSTC-3-F5]">
      <seq>ctcgcctttcagttttcttcttggtagcagcagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgtgtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattgggcaatttggtgttggtttctactctgctaacttggtagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="176" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34782" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="448" r_length="130" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E399944" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGC</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGTGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGGCAATTTGGTGTTGGTTTCTACTCTGCTAACTTGGTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337753" ref_strand="+" ref_description="SGN-E337753 [cTOE-17-D1]">
      <seq>cctttgtgttccatttcgccttacaggtttcttcagctcgctagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactgtctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggggaataacctgcgtacaattgcaaggtcaggaaccaaggagttcatgaaagctcttgcagctggtgctgatgttagcatgattgggcaattcggtgtaggttgctactctgcttacttggtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36637" stop="34483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36337" g_stop="36159" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="321" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34783" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="450" r_length="129" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337753" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36337" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAG</genome_strand>
        <mrna_strand>CCTTTGTGTTCCATTTCGCCTTACAGGTTTCTTCAGCTCGCTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTGTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGGGAATAACCTGCGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGAAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGGCAATTCGGTGTAGGTTGCTACTCTGCTTACTTGGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200116" ref_strand="+" ref_description="SGN-E200116 [cLEB-7-H13]">
      <seq>gcacgaggttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36630" stop="34487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36337" g_stop="36159" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="321" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34787" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="446" r_length="125" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E200116" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36337" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTG</genome_strand>
        <mrna_strand>GCACGAGGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334537" ref_strand="+" ref_description="SGN-E334537 [cTOD-23-H2]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttaccatgattggtcaattcggtgtaagtttctactctgcttacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34787" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="445" r_length="125" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E334537" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTACCATGATTGGTCAATTCGGTGTAAGTTTCTACTCTGCTTACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267404" ref_strand="+" ref_description="SGN-E267404 [cLEI-8-M9]">
      <seq>tgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactctgcttacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36631" stop="34487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36331" g_stop="36159" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="315" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34787" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="440" r_length="125" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267404" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36331" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTG</genome_strand>
        <mrna_strand>TGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208590" ref_strand="+" ref_description="SGN-E208590 [cLEC-39-N6]">
      <seq>ccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattcggtgtaggtttctactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36638" stop="34496"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36338" g_stop="36159" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="322" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34796" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="438" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E208590" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36338" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCT</genome_strand>
        <mrna_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486067" ref_strand="+" ref_description="SGN-E486067 [cSTE-20-J4]">
      <seq>gtttcatctcgcctttcagtttttttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattggtcaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34813" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="424" r_length="99" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E486067" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267533" ref_strand="+" ref_description="SGN-E267533 [cLEI-8-M11]">
      <seq>cccgggctgcaggtttcgcctttcagttttcttcagctcgttagatctacaaaaaaatgtcgggcgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="179" r_length="166" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="321" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34814" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="419" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E267533" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTC</genome_strand>
        <mrna_strand>TTTCGCCTTTCAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGGCGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E367380" ref_strand="+" ref_description="SGN-E367380 [cLPT-7-K6]">
      <seq>ttacagtcttcttcagctctttagatgtacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgcaagagcaagctagatggcaaccagagctcttcatcatattattcagacaaggccaacaatactctcactatcattgatagggtattggtatgacaaaggctgatctggtgaaaacctggtacaattgcaggtcaggaaccaaggagtcatggaagctcttgagctgggctgatgtagcatgattggcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36617" stop="34515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36317" g_stop="36159" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="295" r_length="137" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34814" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="385" r_length="90" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E367380" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.036" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36317" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTC</genome_strand>
        <mrna_strand>TTACAGTCTTCTTCAGCTCTTTAGATGTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGC-ACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCG-CAAGAGCAAGCTAGATGG-CAACCAGAGCTCTTCAT-CATATTATT-CAGACAAGGCCAACAATACTCTCACTATCATTGATAG-GGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAA-AACCT-GGTACAATTGC-AGGTCAGGAACCAAGGAG-TCATGGAAGCTCTTG-AGCTGG-GCTGATG-TAGCATGATTGG-CAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324387" ref_strand="+" ref_description="SGN-E324387 [cTOC-6-B22]">
      <seq>ttccatttcgccttacagttctcttcagctcgttagatctacagggaaatgtcggacgtaaagacgtgggctttccatgctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattggtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34817" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="408" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E324387" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAA</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTCTCTTCAGCTCGTTAGATCTACAGGGAAATGTCGGACGTAAAGACGTGGGCTTTCCATGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313103" ref_strand="+" ref_description="SGN-E313103 [cTOA-14-J2]">
      <seq>tccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36628" stop="34522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36328" g_stop="36159" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="312" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34822" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="402" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E313103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36328" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTG</genome_strand>
        <mrna_strand>TCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309468" ref_strand="+" ref_description="SGN-E309468 [cTOA-2-E8]">
      <seq>ttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgtgtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36606" stop="34522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36306" g_stop="36159" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="290" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34822" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="380" r_length="90" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E309468" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36306" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTG</genome_strand>
        <mrna_strand>TTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGTGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476965" ref_strand="+" ref_description="SGN-E476965 [cSTB-46-D18]">
      <seq>gtttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34822" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="415" r_length="90" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E476965" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278670" ref_strand="+" ref_description="SGN-E278670 [cLER-10-B18]">
      <seq>ttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36634" stop="34523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36334" g_stop="36159" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="318" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34823" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="407" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E278670" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36334" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATT</genome_strand>
        <mrna_strand>TTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E283777" ref_strand="+" ref_description="SGN-E283777 [cLES-1-O1]">
      <seq>tgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtgggattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36633" stop="34523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36333" g_stop="36159" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34823" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="406" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E283777" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36333" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATT</genome_strand>
        <mrna_strand>TGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGGATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473101" ref_strand="+" ref_description="SGN-E473101 [cSTB-31-K13]">
      <seq>gtttcatctcgcctctcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccacagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtgtgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="183" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="325" r_length="142" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34824" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="413" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E473101" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGAT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCACAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTGTGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444983" ref_strand="+" ref_description="SGN-E444983 [cSTA-44-M2]">
      <seq>ttcatctcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattgcagctggtgctgatgttagcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="181" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34824" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="411" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E444983" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGAT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGCAGCTGGTGCTGATGTTAGCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562564" ref_strand="+" ref_description="SGN-E562564 [1004]">
      <seq>tttcagttttcttcttgagtagcaacagctctttaatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctaggacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctattggcagctggtgctgatgttagcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36293" g_stop="36159" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="170" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="313" r_length="143" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34825" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="401" r_length="88" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E562564" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36293" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTA-GACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTT-GCAGCTGGTGCTGATGTTAGCATGA</genome_strand>
        <mrna_strand>ATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTATTGGCAGCTGGTGCTGATGTTAGCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301385" ref_strand="+" ref_description="SGN-E301385 [cLEW-24-H14]">
      <seq>ctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaagagttcatggaagctcttgcagctggtgctgatgttagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36636" stop="34526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36336" g_stop="36159" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="320" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34826" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="406" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E301385" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36336" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATG</genome_strand>
        <mrna_strand>CTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAAGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313372" ref_strand="+" ref_description="SGN-E313372 [cTOA-13-A11]">
      <seq>ttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgngtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatgttagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36611" stop="34526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36311" g_stop="36159" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="295" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34826" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="381" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E313372" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36311" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATG</genome_strand>
        <mrna_strand>TTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGNGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303068" ref_strand="+" ref_description="SGN-E303068 [cLEW-26-J21]">
      <seq>tttgtgttccattttgccttacagttttgggcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttgtcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattgttccgatgctctacacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaagctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagctggtgctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36604" stop="34534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34834" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="397" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E303068" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTTGCCTTACAGTTTTGGGCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTGTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTGTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTACACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268686" ref_strand="+" ref_description="SGN-E268686 [cLEM-9-G23]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtacaattgcaaggtcaggaaccaaggagttcatggaagctcttgcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34544"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="323" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34844" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="391" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E268686" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34844"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCT</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245362" ref_strand="+" ref_description="SGN-E245362 [cLEF-44-P24]">
      <seq>tttcgccttacagttttcttcagctcgttagatctacaaaggaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaagctgatctggtgaataacctgggtacaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34884" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="336" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E245362" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATTGC</genome_strand>
        <mrna_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAGGAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAAGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTACAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212705" ref_strand="+" ref_description="SGN-E212705 [cLEC-73-B11]">
      <seq>ccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataaactggggacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36638" stop="34712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36338" g_stop="36159" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="322" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34886" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="348" r_length="26" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E212705" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36338" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTACAATT</genome_strand>
        <mrna_strand>CCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAAACTGGGGACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583846" ref_strand="+" ref_description="SGN-E583846 [9667]">
      <seq>tagcaacagctctttaaatctacaaaaaaatgtcggacatatagacgtttgctttccatgctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacctgggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36604" stop="34590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36310" g_stop="36159" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="294" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34890" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="316" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E583846" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36310" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCTGGGTAC</genome_strand>
        <mrna_strand>TAGCAACAGCTCTTTAAATCTACAAAAAAATGTCGGACATATAGACGTTTGCTTTCCATGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCTGGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445828" ref_strand="+" ref_description="SGN-E445828 [cSTA-19-A1]">
      <seq>tcgcctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="175" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="317" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34896" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="333" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E445828" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCT</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469417" ref_strand="+" ref_description="SGN-E469417 [cSTB-11-L1]">
      <seq>cgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36565" stop="34596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36265" g_stop="36159" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="249" r_length="142" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34896" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="265" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E469417" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E469417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36265" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAACCT</genome_strand>
        <mrna_strand>CGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442282" ref_strand="+" ref_description="SGN-E442282 [cSTA-32-H21]">
      <seq>ggctgacatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatgcatattatcccatacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaataac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36552" stop="34712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36252" g_stop="36159" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="236" r_length="142" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34898" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="250" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E442282" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>250</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36252" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATAAC</genome_strand>
        <mrna_strand>GGCTGACATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATGCATATTATCCCATACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338778" ref_strand="+" ref_description="SGN-E338778 [cTOE-21-F5]">
      <seq>tttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36624" stop="34712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36324" g_stop="36159" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="308" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34900" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="320" r_length="12" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E338778" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36324" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAATA</genome_strand>
        <mrna_strand>TTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562354" ref_strand="+" ref_description="SGN-E562354 [794]">
      <seq>acagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtatgtggtatgacaaaggctgatctggtgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36508" stop="34713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36208" g_stop="36159" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="192" r_length="142" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34901" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="203" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E562354" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>203</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36208" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTAT-TGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAAT</genome_strand>
        <mrna_strand>ACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGC-AGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATGTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447307" ref_strand="+" ref_description="SGN-E447307 [cSTA-25-P22]">
      <seq>ggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctctgtccgttaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaaccgacaagagcaagctagaagctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctggtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36312" g_stop="36159" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="296" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34902" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="306" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E447307" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36312" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTGGTGAA</genome_strand>
        <mrna_strand>GGTAGCAACAGCTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTCTGTCCGTTAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCGACAAGAGCAAGCTAGAAGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTGGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366883" ref_strand="+" ref_description="SGN-E366883 [cLPT-6-F2]">
      <seq>gaattcggcacgagggtccctttgtgttccatttcgccttacagttttcttcagctctttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36642" stop="34720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="197" r_length="181" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="339" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34907" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="344" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E366883" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTG</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCTTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337448" ref_strand="+" ref_description="SGN-E337448 [cTOE-11-E14]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcactatcattgatagtggtattggtatgacaaaggctgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="319" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110">
            <donor d_prob="0.229" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34911" g_stop="34907" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="324" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337448" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>324</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
          <exon e_start="34911" e_stop="34907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGGTAAGTAGTAGGGACATATTGGAAGCTAGAAGCTCAACCAGAGTTTCATCTATATTATCTGTTCTTAATGTTGCATTTCTATTTGCTGACCTTCTTTGTTTTATTTGCAGATCTG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG..............................................................................................................ATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E400294" ref_strand="+" ref_description="SGN-E400294 [cSTC-6-O11]">
      <seq>ctttcagttttcttcttggtagcaacagctctttagatctacaaaaaaatgtcggacatagagacgtttgcttttcaggctgagatcaatcagcttctcagtcttattatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgttttgagagtttaactgacaagagcaagctagatgctcaaccagagctcttcatccatattatcccagacaagaccaacaatactctcactatcattgatagtggtattggtatgacaaaggctgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36612" stop="34720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36301" g_stop="36159" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="171" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35022" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="313" r_length="142" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E400294" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>285</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E400294" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36301" e_stop="36159"/>
          <exon e_start="35163" e_stop="35022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG</genome_strand>
        <mrna_strand>CTCTTTAGATCTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTTCAGGCTGAGATCAATCAGCTTCTCAGTCTTATTATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACTGACAAGAGCAAGCTAGATGCTCAACCAGAGCTCTTCATCCATATTATCCCAGACAAGACCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E365840" ref_strand="+" ref_description="SGN-E365840 [cLPT-8-O8]">
      <seq>ttccatttcgccttacagatttcttcagctctttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaacaatactctcactatcattgatagtggtattggtatgacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="34728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35028" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="307" r_length="136" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E365840" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
          <exon e_start="35163" e_stop="35028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAA</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGATTTCTTCAGCTCTTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAACAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582486" ref_strand="+" ref_description="SGN-E582486 [8119]">
      <seq>ctacaaaaaaatgtcggacatagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatactttctccgtgaactcatcatcaattcttccgatgctctagacaagatccgttttgagagtttaacccgacaagagcaagctcaaagctcaaccaaagctcttcatccatattatcccagacaagacaacaatactctcactatcattgatagtggtattggtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36591" stop="34732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36291" g_stop="36159" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35032" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="266" r_length="132" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E582486" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36291" e_stop="36159"/>
          <exon e_start="35163" e_stop="35032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGAT-CTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAA-CCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATG</genome_strand>
        <mrna_strand>CTACAAAAAAATGTCGGACATAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATACTTTCTCCGTGAACTCATCATCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGTTTTGAGAGTTTAACCCGACAAGAGCAAGCTCAAAGCTCAACCAAAGCTCTTCATCCATATTATCCCAGACAA-GACAACAATACTCTCACTATCATTGATAGTGGTATTGGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322781" ref_strand="+" ref_description="SGN-E322781 [cTOB-30-I9]">
      <seq>tttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatgggtcaacagagctcttcatccatattattccagacaaggccaataatactctcactatcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36635" stop="34749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36335" g_stop="36159" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35049" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="292" r_length="115" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E322781" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36335" e_stop="36159"/>
          <exon e_start="35163" e_stop="35049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTG</genome_strand>
        <mrna_strand>TTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGGTCAACAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270842" ref_strand="+" ref_description="SGN-E270842 [cLEM-6-G24]">
      <seq>tccctttgtgttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgatgctctagacaagatccgctttgagagtttaaccgacaagagcaagctagatggtcaaccagagctcttcatccatattattccagacaaggccaataatactctcacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36639" stop="34755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36339" g_stop="36159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35163" g_stop="35055" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="290" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E270842" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36339" e_stop="36159"/>
          <exon e_start="35163" e_stop="35055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGATGTAAGTCTCCGACGGTTTAGTTTTTTTTATCTTCTAGGATACTGTGGTTTTATTGCTCTTTCATAGTTTAAAATTTGATTATTCTAGAGCGATCTGAGCTTTTTTTTATTGTCTTCGGAGAAAGCTTAATGTGATCTATGTGATTTTGAAGTTTGATTATTAGAGAGCAGCATCAATTTTTTTTGAGTTTTTATATGTATTTTGTTGGTGTATAGCTTAACGTGATCTTCTAGGATACTGTAGGTGCTATAATTTTGAAGCAATGATTATTTTAGAGCAGTTTATTTTCTATGTGGAGGTTATATGCTTATCTGTATTGTTGTTGTTGATAGCTTAAGGTGATCTTCCAGCATACACTGTAGTGCTATGGCGCTCTTTGATTATGAACTGTGATTATTTTAGAGCAGCTGAGTATTTTTGTGAGTTTTTTCATATGTATTCTATATATGGATAGCTTGATGTGATTGTCTGGGATACTGCTGTTCCACAGTGCTCTGTCTGGATCGTTCAGAGCTTCTGTTTTGGCATCTTAATACTTAGTTGATAGGAGTGAGTATTTAGCCTGCCGTGTATCTCCAATGGTAATTAAAAATTTGCCTGGTTTGTGTATCGTGTCTTCTAGATACCTAGTCTGAACATATGTATCATCGTAGTGTTATTATATGATTTTCACTATGATATACCATAGTGCCATCGACCTCTGTGACTGCGCAAAATAATTTGAGTAATTTAGAGCACCTAATTCAATGTTCTGCTTTGTCGTCATAATAAGAGTTTATCTAGTTGTCCTATTCTTGTTCAGACTAGGTAATGCAGATACAAGTCTGAATTTTGATTGTCCGATCAGCTAATTAAATCAATATGTTTCTGGTTGAGGGATTCGGTTCTGTTATCTGGATCTATTATATCACAGGAAATGAAATGTTTGTTCTTACTTGGTTGTTAATTGTATGCCATATTTGATATTTTTTTGTATTTTGGGATTATACTTTTAGGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTA</genome_strand>
        <mrna_strand>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315778" ref_strand="+" ref_description="SGN-E315778 [cTOA-26-J13]">
      <seq>ttccatttcgccttacagttttcttcagctcgttagatctacaaaaaaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactcatcagcaattcttccgaatggctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="35858"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36159" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E315778" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>171</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT</genome_strand>
        <mrna_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337551" ref_strand="+" ref_description="SGN-E337551 [cTOE-11-E4]">
      <seq>ttccatttcgccctacagctttcttcagctcgttagatctacaaataaatgtcggacgtagagacgtttgctttccaggctgagatcaatcagcttctcagtcttatcatcaacactttctacagcaacaaggagatctttctccgtgaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="36629" stop="35877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36329" g_stop="36177" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E337551" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>153</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36329" e_stop="36177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTC</genome_strand>
        <mrna_strand>TTCCATTTCGCCCTACAGCTTTCTTCAGCTCGTTAGATCTACAAATAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276434" ref_strand="+" ref_description="SGN-E276434 [cLEN-17-H23]">
      <seq>attacaataagtaaggaactagaaacggagattattgaagctgtagcggaaaatgagttgccggtaggtgggaaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaatgtggtttctaaaggagtgagagacattccagggaacttgcagtccgccactagcaatattccttctgggaaagccctcatgtattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44447" stop="47972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44747" g_stop="45156" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47672" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="549" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E276434" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44747" e_stop="45156"/>
          <exon e_start="47534" e_stop="47672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACAATAAGTAAGGAACTAGAAACGGAGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTC</genome_strand>
        <mrna_strand>ATTACAATAAGTAAGGAACTAGAAACGGAGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344458" ref_strand="+" ref_description="SGN-E344458 [cTOF-14-M6]">
      <seq>gaactagaaacggagattattgaagctgtagcggaaaatgagttgccggtaggtgggaaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgagaagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaatgtggtttctaaaggagtgagagacattccagggaacttgcagtccgccactagcaatattccttctgggaaagccctcatgtattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattccttccagtgatagtattggtgcctcagaaatttgccatttgctttactcttggatgttcgtttatcattgggtcattcttcgcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44462" stop="48059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44762" g_stop="45156" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47759" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="622" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E344458" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44762" e_stop="45156"/>
          <exon e_start="47534" e_stop="47759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTAGAAACGGAGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAG-AGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTC</genome_strand>
        <mrna_strand>GAACTAGAAACGGAGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698205" ref_strand="+" ref_description="SGN-E698205 [FA05CD01]">
      <seq>agattattgaagctgtagcggaaaatgagttgccggtaggtgggaaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaatgtggtttctaaaggagtgagagacattccagggaacttgcagtccgccactagcaatattccttctgggaaagccctcatgtattttggtctattcatggcgactgtagtcttcttcattttcatggcattcactttattccttccagtgatagtattggtgcctcagaaatttgccatttgctttactcttggatgttcgtttatcattgggtcattcttcgcactcaagggcccgaagactcagtttgctcatatgttctcaatggagagactcccttttacgctaggtttcatgggtagcatgattggcactctctacgtttccatggcactccatagctatatcctttcggtgctcttctctgtgattcaggttctggcattagcatactacgcaatatcctactttcccggtggctctgctggcttgaaatttctgtcgtcttctatgatttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44475" stop="48560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44775" g_stop="45156" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47801" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="650" r_length="268" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47802" i_stop="47894" i_length="93">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47895" g_stop="47999" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="755" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48000" i_stop="48174" i_length="175">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48175" g_stop="48260" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="841" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E698205" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44775" e_stop="45156"/>
          <exon e_start="47534" e_stop="47801"/>
          <exon e_start="47895" e_stop="47999"/>
          <exon e_start="48175" e_stop="48260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAGGTATTTTTTTTCCCCTTTACAACTGGTCTATGGTGCTGTGTATTTCGTGCTTAATGTCCTCTAAATCTTTGTTTACCCCGTAATTTGTACCAGAGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAGGTAACTTGAACTTCCAGTGTTCTTTTCCTCCCCTTTTTGGTTCTGTTTCTTCTTTCATCTTTTGCAGTTATTGTCTATCGCATGATTTATTCTCGTCTCTCTGTCTAAAGTTTCTTACTTCCAGTTTTCAACTGCTGAAAGCAATTATTGTTGTCTCACTTCCCTGTCATTTCAGGTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTC</genome_strand>
        <mrna_strand>AGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGTAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAG.............................................................................................AGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAG...............................................................................................................................................................................GTTCTGGCATTAGCATACTACGCAATATCCTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238311" ref_strand="+" ref_description="SGN-E238311 [cLED-17-G17]">
      <seq>ttattgaagctgtagcggaaaatgagttgccggtaggtgggaaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44478" stop="45371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44778" g_stop="45071" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E238311" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>294</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44778" e_stop="45071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGA</genome_strand>
        <mrna_strand>TTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270521" ref_strand="+" ref_description="SGN-E270521 [cLEN-1-I7]">
      <seq>gaagctgtagcttaaaatgagttgccggtaggtgggaaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44483" stop="45454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44783" g_stop="45154" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="372" r_length="372" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E270521" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44783" e_stop="45154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAAT</genome_strand>
        <mrna_strand>GAAGCTGTAGCTTAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486525" ref_strand="+" ref_description="SGN-E486525 [cSTE-22-M8]">
      <seq>gaaatgagttaccggtaggtgggaaagtaacaagcaattctggtctccggcggggctccgtttggatccgattcaatttctccatattccacaattactatagcactgcggcagtagtcgactcgccggacagagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcagcaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatctgcaaaatcatcggaagagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaacgtggtttctaaaggagtgagggacattccagggaacttgcagtccgccactagcaacattccttctgggaaagccctcatgtattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattccttccagtgatagtattggtgcctcagaaatttgccatttgctttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44497" stop="48020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44796" g_stop="45156" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47720" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="547" r_length="187" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E486525" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44796" e_stop="45156"/>
          <exon e_start="47534" e_stop="47720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACT</genome_strand>
        <mrna_strand>GAAATGAGTTACCGGTAGGTGGGAAAGTAACAAGCAATTCTGGTCTCCGGCGGGG-CTCCGTTTGGATCCGATTCAATTTCTCCATATTCCACAATTACTATAGCACTGCGGCAGTAGTCGACTCGCCGGACAGAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAGCAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCTGCAAAATCATCGGAAGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGGGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAACATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427356" ref_strand="+" ref_description="SGN-E427356 [STM-48-E22]">
      <seq>gaaatgagttaccggtaggtgggaaagtaacaagcaattctggtctccggcggggctccgtttggatccgattcaatttctccatattccacaattactatagcactgcggcagtagtcgactcgccggacagagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcagcaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatctgcaaaatcatcggaagagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaacgtggtttctaaaggagtgagggacattccagggaacttgcagtccgccactagcaacattccttctgggaaagccctcatgtattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44497" stop="47974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44796" g_stop="45156" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47674" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="501" r_length="141" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E427356" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44796" e_stop="45156"/>
          <exon e_start="47534" e_stop="47674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCT</genome_strand>
        <mrna_strand>GAAATGAGTTACCGGTAGGTGGGAAAGTAACAAGCAATTCTGGTCTCCGGCGGGG-CTCCGTTTGGATCCGATTCAATTTCTCCATATTCCACAATTACTATAGCACTGCGGCAGTAGTCGACTCGCCGGACAGAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAGCAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCTGCAAAATCATCGGAAGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGGGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAACATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347863" ref_strand="+" ref_description="SGN-E347863 [cTOF-31-G17]">
      <seq>aaagcaacaagcaattctggtcaccggcggggtctccgtttggatccgatccaaattctccatattcctcagttactttaacactgcgactgtagtcgactcgccggacatagatacacaatgcagaagtggttttcagcgggcagcggcggcggagatgatcgttatgttgagcaacaacaagcttcttcttcaactccttctttgctggctgattggaattcatacgcatcagcaaaatcatcggatgagagctccagcactgcgttcataggcagcttcgatctcgaatccgctgttcgttccgctaacgataccgtttctggcacttttaatgtggtttctaaaggagtgagagacattccagggaacttgcagtccgccactagcaatattccttctgggaaagccctcatgtattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattccttccagtgatagtattggtgcctcagaaatttgccatttgctttactcttggatgttcgtttatcattgggtcattcttcgcactcaagggcccgaagactcagtttgctcatatgttctcaatggagagactcccttttacgctaggtttcatgggtagcatgattggcactctctacgtttccatggcactccatagctatatcctttcggtgctcttctctgtgattcaggttctggcattagcatactacgcaatatcttactttcccggtggctctgctggcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="44519" stop="48531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44819" g_stop="45156" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47534" g_stop="47801" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="606" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47802" i_stop="47894" i_length="93">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47895" g_stop="47999" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="711" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48000" i_stop="48174" i_length="175">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48175" g_stop="48231" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="768" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E347863" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44819" e_stop="45156"/>
          <exon e_start="47534" e_stop="47801"/>
          <exon e_start="47895" e_stop="47999"/>
          <exon e_start="48175" e_stop="48231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGTGTAAGTTACTTTCTCATCCTGGAGTCAATTTCCTTTTTATCTGTAATTTGTGCTTTAAAGGAACTGATAGGTAATTCACTAATACTACTCCAATTTTGGCCTCGAGCTGAGGAAGAAAGCTGATAACGAGTACATGTAGCTAAAACGTTCTGTATTAGTCGTAATTCTTGCTGATCCTGTTGGAAATGTTCTGAAATCGACAATATAGTTTGAATTTGGTAGTTTGGATTCCACAGACCCATTGAGATGTGTTATTAATTAAGAATATGGACATTGGATCTAATCAACTCCAAATTTAGCTCATCAGGCGAGTATCGTCGATGGCCATATATCCATTATGTCAGTCAGTAAGAGGCTCTTAACGTTGCAAACTCCTCTTTGCTTTCATGAGATTGTTTTGCTAAATATGTGTATCCACCTAGAAAAACATAATTTGTGGTCTGTTGGATCAGAGTCCGAGATAGAGATAAATTCAACAAATAAGCTTCTAATGACTGACAAAAACAATAAAGATAAGAAGAATTATGTGGTTTGGTGTGATTATGATATGAGTTGAGTTTAAATGAAGCGGTGACGATTCATATAGCTAGTCCAACTTGTTTGAGACTGACGCGTAATTGTTGTTGTATCCCAATGTCTAATTCCTCTGGTTCCATTATGTAGTATCCTGGACTTCTCCTTCTAAAATAGTCTTTCTCATATTTAATTTTGTTGTTCTGCACTCTTATCACATTGATTAGTATCTCATCCCTGACCTTGACTATTAGTCTTCTCAACATTTCTGTATCTTTTGAGATGATTACTCTGAAAGATAGGTTGTTCAAAGGAATTCAGGGATTTTCTCAATAGTGCTTGACAGGTTAGACTGGACAAATTAGAAGTTTGAAACTACAGAATTGTATTTGTTGCTCGCTTCCCAGAAAACAAAATCTGAAATAGTTAGTTTTTAACATAATGGCTAGTTATAAATCAGATCTCACTAAGAAAGGAAAGACTAGCAGTGTAACAAGGTATTGTTTTGCCAACATTGCTTAATAGTGAGTCTCACAAGCAAGGTACAATATTTTCTTGATTCTTACATTTGGAAATGAGCCTAGACCTGAGTATCGATATAGAAATCAATGTTAACTTATATGACACTGATTCCCAGTTGTTGATTGAAAGTCTGATAGTGTTAGCATTTAGCAATGACAAAAACATTAAGGCGTGCAAGCTAATACTTCATTTTATTTTGATGTGCTTTAGGAAATCGTGGGCTCTCAGAGTACTAGACTTGAGTATTGATATAGAAATTATCAGTTAGATGTCCAAATGATACTTGTGTGGGTGGTCCTTTCGTCTAGAAAATTTTCCCTCCTACGAATTATATCACAAAGTTGGAAATTCAGCTTAAAGTAGGCAGGATCCATCATTCAGGATAGCGCTTTGGCCTACTTCTGGGTCTGCCGAGGATAAGGAGAGAAAGTGAGAGCCAATTGAGTTCAGAAGGTAAAAAAACTTACTCCCAAGGAAAAAAGAATCTTTTATCTGATTGATATTTCATGTTGATGGAGCCATTTTCTGGGAGATCATAAATTTGTGCATGTCATGAACCTTATGAGCCTGAATCTGATGTCATAAAAACAAAATACAGAAGTACTTTGTGAAACAGAGAGCTGATTTACTAACATCAAAATTCCTAGTTTCACTCCAAATTGCATAGTGAATGGCACGAGTGAGATAACAATAGGGGTTTTGGGAAGTGAAAACCATGGAGATCTGTAGTTAGCTGGCTAGTATTTATCACTAGAGAAAGAATCCTCTTTTGGTGCAGGTTGTACTCTTTAGTCATAATTTTTTTTTCATAACAATTGTCAATGTTGTGAAATTTAGTTCTTCTGTAACCAAGTAAGATGACACTATAGGTATTGAAAATACAAAAAATTGTAGTTACCTGGTTGGATCTTATCATAGGAGAAAGAATCCTCTTCCAGTACATATTGGAGTCTTCTTGTCGTTGATGGATTTTCATCATACTATTTATCATCATCAATGCTGTGTAAGTCATGATTTTTATCATAATCATCATCAATACTGTGAAGTTATACTCTATGCCGATATCATGTCTTTATTTCGGAGGAGTCCTCTATGGTTGCTTGGTAGACTCCCAAGTCCCAACCTTGTTTCTTCATTCCTTGTTGTATATTGTAATACCACAATACCACATGAATTTATTTCAGACAAATGAAATTCATGGATTGGAGAAAAGCTGTGGATGTGCTGTGAAATGTTATATGGAAAATGTATTTCTTCCCTGCTTTTTGAATAAGTTGACATGTTGAGGAGTTCTTTGACTATTGTTTTGATGACAGAATATTGGTTATTGATCCTTATTCAGGGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAGGTATTTTTTTTCCCCTTTACAACTGGTCTATGGTGCTGTGTATTTCGTGCTTAATGTCCTCTAAATCTTTGTTTACCCCGTAATTTGTACCAGAGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAGGTAACTTGAACTTCCAGTGTTCTTTTCCTCCCCTTTTTGGTTCTGTTTCTTCTTTCATCTTTTGCAGTTATTGTCTATCGCATGATTTATTCTCGTCTCTCTGTCTAAAGTTTCTTACTTCCAGTTTTCAACTGCTGAAAGCAATTATTGTTGTCTCACTTCCCTGTCATTTCAGGTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTG</genome_strand>
        <mrna_strand>AAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAG.............................................................................................AGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAG...............................................................................................................................................................................GTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286903" ref_strand="-" ref_description="SGN-E286903 [cLES-14-N20]">
      <seq>aaattcagagattttggtctattcatggcgactggagtcttcttcattttcatggcattcactttattccttccagtgatagtattggtgcctcagaaatttgccatttgctttactcttggatgttcgtttatcattgggtcattcttcgcactcaagggcccgaagactcagtttgctcatatgttctcaatggagagactcccttttacgctaggtttcatgggtagcatgattggcactctctacgtttccatggcactccatagctatatcctttcggtgctcttctctgtgattcaggttctggcattagcatactacgcaatatcttactttcccggtggctctgctggcttgaaatttctgtcgtcttctatgatttcttcagtgttgaaatgctttggcaggtgaaggcttgtaacgcgactgtgtcaactttctgcaacattattgttcattagtatacattctgtagttgtagtcttgtattctgaaactatggtgtacaattttgacaaaatttagttaagttaaaaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="47314" stop="48706"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47604" g_stop="47801" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47802" i_stop="47894" i_length="93">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47895" g_stop="47999" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="303" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48000" i_stop="48174" i_length="175">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48175" g_stop="48403" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="532" r_length="229" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="536" polyA_stop="557"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E286903" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286903" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="47604" e_stop="47801"/>
          <exon e_start="47895" e_stop="47999"/>
          <exon e_start="48175" e_stop="48403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAGGTATTTTTTTTCCCCTTTACAACTGGTCTATGGTGCTGTGTATTTCGTGCTTAATGTCCTCTAAATCTTTGTTTACCCCGTAATTTGTACCAGAGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAGGTAACTTGAACTTCCAGTGTTCTTTTCCTCCCCTTTTTGGTTCTGTTTCTTCTTTCATCTTTTGCAGTTATTGTCTATCGCATGATTTATTCTCGTCTCTCTGTCTAAAGTTTCTTACTTCCAGTTTTCAACTGCTGAAAGCAATTATTGTTGTCTCACTTCCCTGTCATTTCAGGTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTCAGTGTTGAAATGCTTTGGCAGGTGAAGGCTTGTAACGCGACTGTGTCAACTTTCTGCAACATTATTGTTCATTAGTATACATTCTGTAGTTGTAGTCTTGTATTCTGAAACTATGGTGTACAATTTTGACAAAATTTAGTTAA</genome_strand>
        <mrna_strand>AAATTCAGAGATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAG.............................................................................................AGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAG...............................................................................................................................................................................GTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTCAGTGTTGAAATGCTTTGGCAGGTGAAGGCTTGTAACGCGACTGTGTCAACTTTCTGCAACATTATTGTTCATTAGTATACATTCTGTAGTTGTAGTCTTGTATTCTGAAACTATGGTGTACAATTTTGACAAAATTTAGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270522" ref_strand="+" ref_description="SGN-E270522 [cLEN-1-I7](-)">
      <seq>ctttcggtgctcttctctgtgattcaggttctggcattagcatactacgcaatatcttactttcccggtggctctgctggcttgaaatttctgtcgtcttctatgatttcttcagtgttgaaatgctttggcaggtgaaggcttgtaacgcgactgtgtcaactttctgcaacattattgttcattagtatacattctgtagttgtagtcttgtattctaaaactatggtgtacaattttgacaaaatttagttaagttctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="47673" stop="48709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47973" g_stop="47999" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48000" i_stop="48174" i_length="175">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48175" g_stop="48409" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="262" r_length="235" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="263" polyA_stop="272"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E270522" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47973" e_stop="47999"/>
          <exon e_start="48175" e_stop="48409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCGGTGCTCTTCTCTGTGATTCAGGTAACTTGAACTTCCAGTGTTCTTTTCCTCCCCTTTTTGGTTCTGTTTCTTCTTTCATCTTTTGCAGTTATTGTCTATCGCATGATTTATTCTCGTCTCTCTGTCTAAAGTTTCTTACTTCCAGTTTTCAACTGCTGAAAGCAATTATTGTTGTCTCACTTCCCTGTCATTTCAGGTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTCAGTGTTGAAATGCTTTGGCAGGTGAAGGCTTGTAACGCGACTGTGTCAACTTTCTGCAACATTATTGTTCATTAGTATACATTCTGTAGTTGTAGTCTTGTATTCTGAAACTATGGTGTACAATTTTGACAAAATTTAGTTAAGTTCTC</genome_strand>
        <mrna_strand>CTTTCGGTGCTCTTCTCTGTGATTCAG...............................................................................................................................................................................GTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTCAGTGTTGAAATGCTTTGGCAGGTGAAGGCTTGTAACGCGACTGTGTCAACTTTCTGCAACATTATTGTTCATTAGTATACATTCTGTAGTTGTAGTCTTGTATTCTAAAACTATGGTGTACAATTTTGACAAAATTTAGTTAAGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701388" ref_strand="+" ref_description="SGN-E701388 [FA15DD02]">
      <seq>gcaatttagacgttctcacgaaccttcaaaaccttgtttcactcaacatatcattcaatgacttctatggaaaacttcccaattctccattctttcataagcttcctttgagtgatcttactggaaaccaagctctatacatttctggtggggacgtgatccaaacggggcctgctggacatgccaaaaccaccatgaagcttgctatgtcaatcctagtcagtataagtgctgtgctggttctgctagccatctacacgttgatcaggatgagaatggccgcaaagtatggaccagaagttgatacatgggaaatgactctttaccagaagttggacttttcaatagatgacattgttcataatctaacgtcagctaatgtcattggcactgggagctctggggttgtatacagaataatgaccgaaaatggggtgactttagcagtcaagaaaatgtggtcatcagagaaatcaggagcatttggttcagaaattcaaacacttggttcaatccggcacaagaacatcgtacgccttctcggctgggcttcaaaccagaacatgaagcttctgttctatgactaccttcccaatgggagtttgagctcattactccatggtgttggcaaaggagcagcagaatgggaaaacagatttgatgtagtccttggagtagcccatgcacttgcatacttgcatcatgactgtgtaccccctataatgcatggagatgtcaaagcaatgaatgtattgttaggctctagaatggagccttacctggccgatttcgggttggcaaagattgtcaacactgatgttgatgcagacttgttaaaggagagtcaaaggcctcatcttgctggttcttatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="56544" stop="58017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56844" g_stop="57717" g_length="874"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="874" r_length="874" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E701388" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56844" e_stop="57717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTTAGACGTTCTCACGAACCTTCAAAACCTTGTTTCACTCAACATATCATTCAATGACTTCTATGGAAAACTTCCCAATTCTCCATTCTTTCATAAGCTTCCTTTGAGTGATCTTACTGGAAACCAAGCTCTATACATTTCTGGTGGGGACGTGATCCAAACGGGGCCTGCTGGACATGCCAAAACCACCATGAAGCTTGCTATGTCAATCCTAGTCAGTATAAGTGCTGTGCTGGTTCTGCTAGCCATCTACACGTTGATCAGGATGAGAATGGCCGCAAAGTATGGACCAGAAGTTGATACATGGGAAATGACTCTTTACCAGAAGTTGGACTTTTCAATAGATGACATTGTTCATAATCTAACGTCAGCTAATGTCATTGGCACTGGGAGCTCTGGGGTTGTATACAGAATAATGACCGAAAATGGGGTGACTTTAGCAGTCAAGAAAATGTGGTCATCAGAGAAATCAGGAGCATTTGGTTCAGAAATTCAAACACTTGGTTCAATCCGGCACAAGAACATCGTACGCCTTCTCGGCTGGGCTTCAAACCAGAACATGAAGCTTCTGTTCTATGACTACCTTCCCAATGGGAGTTTGAGCTCATTACTCCATGGTGTTGGCAAAGGAGCAGCAGAATGGGAAAACAGATTTGATGTAGTCCTTGGAGTAGCCCATGCACTTGCATACTTGCATCATGACTGTGTACCCCCTATAATGCATGGAGATGTCAAAGCAATGAATGTATTGTTAGGCTCTAGAATGGAGCCTTACCTGGCCGATTTCGGGTTGGCAAGGATTGTCAACACTGATGTTGATGCAGACTTGTTAAAGGAGAGTCAAAGGCCTCATCTTGCTGGTTCTTATGG</genome_strand>
        <mrna_strand>GCAATTTAGACGTTCTCACGAACCTTCAAAACCTTGTTTCACTCAACATATCATTCAATGACTTCTATGGAAAACTTCCCAATTCTCCATTCTTTCATAAGCTTCCTTTGAGTGATCTTACTGGAAACCAAGCTCTATACATTTCTGGTGGGGACGTGATCCAAACGGGGCCTGCTGGACATGCCAAAACCACCATGAAGCTTGCTATGTCAATCCTAGTCAGTATAAGTGCTGTGCTGGTTCTGCTAGCCATCTACACGTTGATCAGGATGAGAATGGCCGCAAAGTATGGACCAGAAGTTGATACATGGGAAATGACTCTTTACCAGAAGTTGGACTTTTCAATAGATGACATTGTTCATAATCTAACGTCAGCTAATGTCATTGGCACTGGGAGCTCTGGGGTTGTATACAGAATAATGACCGAAAATGGGGTGACTTTAGCAGTCAAGAAAATGTGGTCATCAGAGAAATCAGGAGCATTTGGTTCAGAAATTCAAACACTTGGTTCAATCCGGCACAAGAACATCGTACGCCTTCTCGGCTGGGCTTCAAACCAGAACATGAAGCTTCTGTTCTATGACTACCTTCCCAATGGGAGTTTGAGCTCATTACTCCATGGTGTTGGCAAAGGAGCAGCAGAATGGGAAAACAGATTTGATGTAGTCCTTGGAGTAGCCCATGCACTTGCATACTTGCATCATGACTGTGTACCCCCTATAATGCATGGAGATGTCAAAGCAATGAATGTATTGTTAGGCTCTAGAATGGAGCCTTACCTGGCCGATTTCGGGTTGGCAAAGATTGTCAACACTGATGTTGATGCAGACTTGTTAAAGGAGAGTCAAAGGCCTCATCTTGCTGGTTCTTATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269551" ref_strand="+" ref_description="SGN-E269551 [cLEM-2-O15]">
      <seq>taaaattggtcttcaagaatgacgaagctggtgaagagcaagaatcaagagaatcaggacatgctatatcaaaaccgtctctggatcaattatatgtccaggcatctaaacagtggcttaaagggcaagatatgcctagagaaaaacgtaaagcaaggattattcgttggcttcagtatcgtggctttgattggagcgtggttagtttcatacttaagaagttagaatccagccatcctcaatagagtccctttactcagcgaaagggattataatgatctgtttgatgttgccttaactcgatgaggtagacgagctcttcctactgtaaaatggcccttagtggaagtacaaggaactgtgtcaattattcggtctatttttgccatctcaaaaatagttttcaagtgttaagatcaatacagaaggcaagaagtcaagagccctaaagtctttttgtatcaggaagtgagcagtttcactggaagtaaattgtactgtattttgccacattaaccagattgtaaataagaatgttcccatttttaactttnaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="60351" stop="59199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60051" g_stop="59499" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="555" polyA_stop="564"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E269551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60051" e_stop="59499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTGGTCTTCAAGAATGACGAAGCTGGTGAAGAGCAAGAATCAAGAGAATCAGGACATGCTATATCAAAACCGTCTCTGGATCAATTATATGTCCAGGCATCTAAACAGTGGCTTAAAGGGCAAGATATGCCTAGAGAAAAACGTAAAGCAAGGATTATTCGTTGGCTTCAGTATCGTGGCTTTGATTGGAGCGTGGTTAGTTTCATACTTAAGAAGTTAGAATCCAGCCATCCTCAATAGAGTCCCTTTACTCAGCGAAAGGGATTATAATGATCTGTTTGATGTTGCCTTAACTCGATGAGGTAGACGAGCTCTTCCTACTGTAAAATGGCCCTTAGTGGAAGTACAAGGAACTGTGTCAATTATTCGGTCTATTTTTGCCATCTCAAAAATAGTTTTCAAGTGTTAAGATCAATACAGAAGGCAAGAAGTCAAGAGCCCTAAAGTCTTTTTGTATCAGGAAGTGAGCAGTTTCACTGGAAGTAAATTGTACTGTATTTTGCCACATTAACCAGATTGTAAATAAGAATGTTCCCATTTTTAACTTT</genome_strand>
        <mrna_strand>TAAAATTGGTCTTCAAGAATGACGAAGCTGGTGAAGAGCAAGAATCAAGAGAATCAGGACATGCTATATCAAAACCGTCTCTGGATCAATTATATGTCCAGGCATCTAAACAGTGGCTTAAAGGGCAAGATATGCCTAGAGAAAAACGTAAAGCAAGGATTATTCGTTGGCTTCAGTATCGTGGCTTTGATTGGAGCGTGGTTAGTTTCATACTTAAGAAGTTAGAATCCAGCCATCCTCAATAGAGTCCCTTTACTCAGCGAAAGGGATTATAATGATCTGTTTGATGTTGCCTTAACTCGATGAGGTAGACGAGCTCTTCCTACTGTAAAATGGCCCTTAGTGGAAGTACAAGGAACTGTGTCAATTATTCGGTCTATTTTTGCCATCTCAAAAATAGTTTTCAAGTGTTAAGATCAATACAGAAGGCAAGAAGTCAAGAGCCCTAAAGTCTTTTTGTATCAGGAAGTGAGCAGTTTCACTGGAAGTAAATTGTACTGTATTTTGCCACATTAACCAGATTGTAAATAAGAATGTTCCCATTTTTAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344989" ref_strand="+" ref_description="SGN-E344989 [cTOF-22-B21]">
      <seq>aagcttcaatcctgtttcattctagagccattatcatcccctgggtgcagaagttcagtgccataagctgctcccgaggcagagattatagcgcttttccagtcaggcacatccccaagagatctaatgaaagccaagagtcagaatctgctttgccaaagaagcactttttggacatcgaaaaaaacagcttcttaaacaggaaagttcaggaaactgaattttctgtcggtggtggagggtcgaagtacggagatataccttttcattccaagtctcgaaatcataagcaaaagcttatcaccagcttagatgatgaggttgaatgggggaaggaagatgaagttgatgaagattttgtacttgaacatggtatagctgaaactgataaagctaggcaagatgctgagacaatcgcagttcgattacttgcttcaagagcacttacggctgtagaactgcagaagaagctcatgggaagaaagtttacagtcaatgttgttaatgctgtaataacagatttccataccaggggtttaatcaatgacggtctgtatgctgaaatgttttctcggtccagatggtcttcctcaagttggggtccacgacgaatcaagcaagccttgatcaagaagggntgtagtgaagtggatgcagnnacatgccataaattggtcttcaagaatgacgaagctggtgaagagcaagaatcaagagaatcaggacatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="63249" stop="59688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62949" g_stop="62907" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62906" i_stop="61802" i_length="1105">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61801" g_stop="61515" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="330" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61514" i_stop="61427" i_length="88">
            <donor d_prob="0.694" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61426" g_stop="61318" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="439" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61317" i_stop="60988" i_length="330">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60987" g_stop="60895" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="532" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60894" i_stop="60596" i_length="299">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60595" g_stop="60508" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="620" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60507" i_stop="60098" i_length="410">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60097" g_stop="59988" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="730" r_length="110" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E344989" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62949" e_stop="62907"/>
          <exon e_start="61801" e_stop="61515"/>
          <exon e_start="61426" e_stop="61318"/>
          <exon e_start="60987" e_stop="60895"/>
          <exon e_start="60595" e_stop="60508"/>
          <exon e_start="60097" e_stop="59988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTCAATCCTGTTTCATTCTAGAGCCATTATCATCCCCTGGTTAGCAATTTTCCTCACTTGAAGAATTTATAGTAAATTCTTTATACTAGTAGCTGCAACTATGTTTACTAGAGTTCTGTCATGTTCACACATATTACTGCATTTTTTGATGTTATAGAATAGTATTTTTATAACCTGACATTTCTTTTAAGTGCTTCTGTGATTCTGTGAAGTGGGTTGGTTAAGAAAAGATTTAATTTTCATGGAAAAAATGACTATAGAAAAGATAACAGCAGTTAATTGTCCAAATTGTTGAAAATGGGTAGTTGTGTTATGTTGGGTTTTATTAGAGAAAAGGTCTGATCTTTAGGACAAATATGACCATAGGAAGAGATTACTGCAGTTCATTCTCCAAATTCTTGAAATGGGTATTTGTGTGAGTGGATTTAGTGAAGAGAAGGTTTGATTTTGTAGGCCAAATGTGACCATCGAAAAGATTATTACAGTTCATTGTCCAAATTATCAAAATGGGTAGTTGTGTTACGTGGGGTTTTTAGTGAAAAGGTTTGATCTCTAGGACAAACATGACAATAGGAAGAGATTACAGCAGTTCATTCTCCCAATTCTTGAAATTGGTACTTGTGTTAAATGGATTCGTGAAGAAAAGGTTTGAATAAGTTCTTGTGTTATGTGCATTGGTTAAAAAAGGTTTGATCTTTAGGTAAGCATGATCATTTAACTAAAAGAGTACCGCTGTTTATTCTCGAAATTCTTGAAATGGTTACTTCTGTTACATGAATCTGTGAAGCTAAGATTTGATCTTTAGAGCAAATTTGACCATAGAAAATATTAGGACAGTTCATTCTTCAACTTCTCGAAATGAGTTCTTGTATTACGTGGATTTGTTAAAGCAAATTTGAAATTTATTGTGCAAACCTGCACATAGAAATGATCTAGACAGTCGTTCTCAAAATTCTTGAAATCGATACCTGCGTCTCATGGTTTGGCTAAGCAAAGCTTTGATATTTAGGGCAAATATGGCCATGAAATATAGTACAGCTCATACACATTTATTGAAATGGGCATATAACTATGGTTGGCTTTGTATGTATGTTAGTCCAATAAAATGGTTTGTTTTAGTATGATATGAATATATGATTATTAGGGTGCAGAAGTTCAGTGCCATAAGCTGCTCCCGAGGCAGAGATTATAGCGCTTTTCCAGTCAGGCACATCCCCAAGAGATCTAATGAAAGCCAAGAGTCAGAATCTGCTTTGCCAAAGAAGCACTTTTTGGACATCGAAAAAAACAGCTTCTTAAACAGGAAAGTTCAGGAAACTGAATTTTCTGTCGGTGGTGGAGGGTCGAAGTACGGAGATATACCTTTTCATTCCAAGTCTCGAAATCATAAGCAAAAGCTTATCACCAGCTTAGATGATGAGGTTGAATGGGGTATGGTTGAATCGATTCACATCTCTCTGTTGTTTTTACCTGTAGTGGAAACTCAAATTCAAATAAGAGGCTGAATATGGAATTTCAGGGAAGGAAGATGAAGTTGATGAAGATTTTGTACTTGAACATGGTATAGCTGAAACTGATAAAGCTAGGCAAGATGCTGAGACAATCGCAGTTCGATTACTTGCTTCAAGGTTGGAATATTAAATGTCTCGTCTCTCTCTATCTGGTCGTTATTATTTGCAGTCAACTATTGTTAGCTCACTGCACTGATCTTACTTGCAACCTGAGTGTTGGTGACTCTGACTCTCTAAGTTTTATATTTTCATCTCCTTAATTATATACTGGCATACCACATAAAGTTGTGTGAGCGTTGATTTCACTTTAGATGCGTGAACTATGAAACTGTTAGAACCTTGCTGATGCACATAAATTATCTTTCCAACTATTGAAGTTAAGAAAAGAGGTCCTCACACTGATGCAAAGAGAACCACTTTTTTGATGCATGCTTTTTTACTGTGCAGAGCACTTACGGCTGTAGAACTGCAGAAGAAGCTCATGGGAAGAAAGTTTACAGTCAATGTTGTTAATGCTGTAATAACAGATTTCCATACCAGGTAAATCAAACTGGAATCTTGATGTTCCCATCATAGTTATCAACCACGTCTTCGATAATACAGAAATGTTATTTCAAGTCTCTGTTACATTTTGGCTATTGGTACTCATTTGTCACTTGTTCACCTACATTTTTCTATTGTTATCTAGAGTGAAGTGCTACACTTAAACTTGCTAAAAGGAAAATTGAAGAACATAATGCAATAGGTTTTATCAGTCATTTATGAGTTTGTATTTCACTGATCCATCTTAATTTCATCATAATTGGCCTCATCTGGATTTGTTCTGTGTATTGCTCTAGGGGTTTAATCAATGACGGTCTGTATGCTGAAATGTTTTCTCGGTCCAGATGGTCTTCCTCAAGTTGGGGTCCACGACGAATCAAGCAAGTAAATTTTTCTCTTTGTGAACTGCTTCACTTATTGAGATTTTGAGCCTACTTTTTATTTTTTTGGCCCATCCATTAGGAGCATGTGAGAGCATATATGCTTCTTGTGGAATCCTAAGTTGACTACTTTATGAGAAGAAATAAAAAAATGTTAACATCATAATGAAGTGCAATTATGGAAGTAGTCATTTGTTTAGCTATTTCAGCATTCTGGTAGCCGACCTCAACTTATTCGTGACTGAGGCATTGTTGTAGTTGTTGTAGTCCAAGCATCTGGTGCTTTATTAGTTTTTTTGAGTAGTTACACTCTTTTTCATTCTTTCTATCCTGCAGTTTATCAAATAGAAGAGTAGCTTTGGTCCCTTTATTTTTGTTAGAACCCTATTGAATGGCCTTGCCATTTTTTGTTAGGCCTTGATCAAGAAGGG-TGTAAGTGAAGTGGATGCAGACA-ATGCCATAAAATTGGTCTTCAAGAATGACGAAGCTGGTGAAGAGCAAGAATCAAGAGAATCAGGACATGC</genome_strand>
        <mrna_strand>AAGCTTCAATCCTGTTTCATTCTAGAGCCATTATCATCCCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCAGAAGTTCAGTGCCATAAGCTGCTCCCGAGGCAGAGATTATAGCGCTTTTCCAGTCAGGCACATCCCCAAGAGATCTAATGAAAGCCAAGAGTCAGAATCTGCTTTGCCAAAGAAGCACTTTTTGGACATCGAAAAAAACAGCTTCTTAAACAGGAAAGTTCAGGAAACTGAATTTTCTGTCGGTGGTGGAGGGTCGAAGTACGGAGATATACCTTTTCATTCCAAGTCTCGAAATCATAAGCAAAAGCTTATCACCAGCTTAGATGATGAGGTTGAATGGG........................................................................................GGAAGGAAGATGAAGTTGATGAAGATTTTGTACTTGAACATGGTATAGCTGAAACTGATAAAGCTAGGCAAGATGCTGAGACAATCGCAGTTCGATTACTTGCTTCAAG..........................................................................................................................................................................................................................................................................................................................................AGCACTTACGGCTGTAGAACTGCAGAAGAAGCTCATGGGAAGAAAGTTTACAGTCAATGTTGTTAATGCTGTAATAACAGATTTCCATACCAG...........................................................................................................................................................................................................................................................................................................GGGTTTAATCAATGACGGTCTGTATGCTGAAATGTTTTCTCGGTCCAGATGGTCTTCCTCAAGTTGGGGTCCACGACGAATCAAGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGATCAAGAAGGGNTGT-AGTGAAGTGGATGCAGNNACATGCCAT-AAATTGGTCTTCAAGAATGACGAAGCTGGTGAAGAGCAAGAATCAAGAGAATCAGGACATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442997" ref_strand="+" ref_description="SGN-E442997 [cSTA-35-F22]">
      <seq>gtctcacagtattctgacagttcatgttcgaggaagagagttggtatctggatctatattaaagggctgccttcaccttgtggatttagctggaagtgagagagtagataaatctgaagctgttggcgagagactaaaggaggcgcaacatataaacaaatctttgtcagcattaggagatgttatctctgctcttgcacaaaagagctcacatattccttatagaaacagcaagcttacacaagtattacaagactcattaggtggtcaggcaaagacgttgatgttcgtgcacataaatccagaggcagatgcatttggagaaacagttagcaccctcaaatttgctgagagggttgcttccatagatcttggcgcagctcgatctaacaaagaaactggtgaaattcgagacatgaaagatgagatctcaaaccttaagcaagtgctggagaagaaggaagctgaacttgaactcctaaaaagtggtgtaaatgttcgaggacaagcatcacctctacgaacaatgagacacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="66211" stop="64810"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65997" g_stop="65989" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65988" i_stop="65909" i_length="80">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65908" g_stop="65655" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="263" r_length="254" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65654" i_stop="65473" i_length="182">
            <donor d_prob="0.558" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65472" g_stop="65309" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="427" r_length="164" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65308" i_stop="65221" i_length="88">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65220" g_stop="65110" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="538" r_length="111" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E442997" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65997" e_stop="65989"/>
          <exon e_start="65908" e_stop="65655"/>
          <exon e_start="65472" e_stop="65309"/>
          <exon e_start="65220" e_stop="65110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTCACAGGTACCAGTTACATAAGTAGATGAACATTATGAAGTGTTGCATGATGTTATTCTTCTTTAATTTTCTTCCTACATTTGCAGTATTCTGACAGTTCATGTTCGAGGAAGAGAGCTGGTATCTGGATCTACATTAAAGGGCTGCCTTCACCTTGTGGATTTAGCTGGAAGTGAGAGAGTAGATAAATCTGAAGCTGTTGGCGAGAGACTAAAGGAGGCGCAACATATAAACAAATCTTTGTCAGCATTAGGAGATGTTATCTCTGCTCTTGCCCAAAAGAGCTCACATATTCCTTATAGAAACAGCAAGCTTACTCAAGTATTACAAGACTCATTAGGTAGATAATGATCACTTTTTGGTCATTTTTTTCGAGTTTAATTCGTTAATGCAATCATTTTCACCTCCAATAATGATAGTATTCCTATTTCGATCTATCTAGGCTTATCACACCCATGTATAATCCTGCTGAAAAAGAGCGAAAATCCTGAAAAGTTAATATTTTTACCTTCTCTTTTACAGGTGGTCAGGCAAAGACGTTGATGTTTGTGCACATAAATCCAGAGGCAGATGCATTTGGAGAAACAGTTAGCACCCTCAAGTTTGCTGAGAGGGTTGCTTCCATAGATCTTGGCGCAGCTCGCTCTAACAAAGAAACTGGTGAAATTCGAGACATGAAAGAAGAGGTCATAACTTCTTAATTACTGGTTGAAAGTACCAAACAATTTCTTGTACCTGTAATTGATGTCTTTGTGTTGTTTCTGGTTAATTTAGATCTCAAACCTTAAGCAAGTGCTGGAGAAGAAGGAAACTGAACTTGAACTCCTAAAAAGTGGTGTAAATGTTCGAGGGCAAGCATCACCTCTACGAACAATGAGGCACATT</genome_strand>
        <mrna_strand>GTCTCACAG................................................................................TATTCTGACAGTTCATGTTCGAGGAAGAGAGTTGGTATCTGGATCTATATTAAAGGGCTGCCTTCACCTTGTGGATTTAGCTGGAAGTGAGAGAGTAGATAAATCTGAAGCTGTTGGCGAGAGACTAAAGGAGGCGCAACATATAAACAAATCTTTGTCAGCATTAGGAGATGTTATCTCTGCTCTTGCACAAAAGAGCTCACATATTCCTTATAGAAACAGCAAGCTTACACAAGTATTACAAGACTCATTAG......................................................................................................................................................................................GTGGTCAGGCAAAGACGTTGATGTTCGTGCACATAAATCCAGAGGCAGATGCATTTGGAGAAACAGTTAGCACCCTCAAATTTGCTGAGAGGGTTGCTTCCATAGATCTTGGCGCAGCTCGATCTAACAAAGAAACTGGTGAAATTCGAGACATGAAAGATGAG........................................................................................ATCTCAAACCTTAAGCAAGTGCTGGAGAAGAAGGAAGCTGAACTTGAACTCCTAAAAAGTGGTGTAAATGTTCGAGGACAAGCATCACCTCTACGAACAATGAGACACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E400917" ref_strand="+" ref_description="SGN-E400917 [PPC-2-D23]">
      <seq>ctactcataaatacacactactgttcattgtatctctctttcttcttctccaactgatttcaaatctcaaataaatcttccccaaatttagaacgaacaaacaaacttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctggattccatatggagcagccatgtactccagaaattgagcaaccaacaacctctatagatgatagtgttcataggcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggagttattgaagcaggggcaagcagtagatattccaaaatatgattataagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtgtccgatatctgatgaatatgaagatatttgtagatacagatgctgatgtacgtctcgcgaggagaataagacgtgacacagttgaaaagggaagagatattagtatggtgcttgatcagtactctaagtttgtgaaagctgcttttgatgacttcattcttcctacaagaagtatgctgacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80643" stop="87001"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80943" g_stop="81053" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="275" r_length="164" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="367" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="437" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="556" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85743" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="653" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86007" g_stop="86086" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="733" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="86087" i_stop="86636" i_length="550">
            <donor d_prob="0.945" d_score="0.98"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="86637" g_stop="86701" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="734" r_stop="797" r_length="64" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E400917" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80943" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85743"/>
          <exon e_start="86007" e_stop="86086"/>
          <exon e_start="86637" e_stop="86701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCATAAATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTACTTGGATGTTCTGCTTTAGTTCTTGACATACGAGCATGTTGTATCCCTCCATATCTACTGGACAGTGCTTTATGTTGGGTCTTCTACTTGTGTGGTTTCATCATCTTAAATTTTCAGTGCAGATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAGGTTAGGAAAACTTTCAGGCTTATTTGAAAAAAGTGGGGATCTTTCACTCAAATTTGACAGATATTTGATAAAGCATTTCTTGAGTTTCTTACTCTTCCAACATATTACATTTTGTTTATAACGAAGACCAGTGACTTGATGACTACGAACCTAATGGAAATTTGGGCTTATAAGGCCAAATGTCATAAGTTAGGATTTCTAACTTCTGACTTTTGGCTTATCTTTGTTCTTTTAGCTTGAAAACAAGTGCTTAAAATCACTTATTTTCTTTTACCGAAAATGCTTAAAAACACCTAAATAAGCCAATCAAAATAGGCTCTAAGTTCCTTCCTCAGTTCATTTCTGTGAAACTTCCATTATGAGTTTCTAAAATTGCCTTTTTTCTAATAAGCTCAATAAAAACCATTTCTTCTTTAACTGATGATTCAACTTCCATCCATCTATTAAGTTTCTAATTGCATTTTTGAAGTTGATTGTCATCGGATTAGCATGATTTTTATGCCTAGGTGTTTGGTTTTCACTAATAATTTGAGTTAAATCTTTGATGCAGTACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGATGT</genome_strand>
        <mrna_strand>CTACTCATAAATACACACTACTGTTCATTGTATCTCTCTTTCTTCTTCTCCAACTGATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAACGAACAAACAAACTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGATTCCATATGGAGCAGCCATGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTGTTCATAGGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGTTATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTATAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGATATCTGATGAATATGAAGATATTTGTAGATACAG.......................................................................................................................................................................................................................................................................ATGCTGATGTACGTCTCGCGAGGAGAATAAGACGTGACACAGTTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTAC-AAGAAGTATGCTGACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212934" ref_strand="+" ref_description="SGN-E212934 [cLEC-73-L14]">
      <seq>tcataaatacacactactgttcattgtatctttctttcttcttctccgactaatttcaaatctcaaataaatcttccccaaatttagaaagaacaaacaagcttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctgggttccatatggagcagccacgtactccagaaattgagcaaccaacaacctctatagatgatagttttcataagcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggaggaattgaagcaggggcaagcagtagatattccaaaatatgattttaagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcaaatgttataatcttggaaagcatactcatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80647" stop="85990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80947" g_stop="81053" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="271" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="363" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="433" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="552" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85690" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="596" r_length="44" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E212934" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212934" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80947" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATAAATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTT</genome_strand>
        <mrna_strand>TCATAAATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAAATGTTATAATCTTGGAAAGCATACTCATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306516" ref_strand="+" ref_description="SGN-E306516 [cLEX-13-O14]">
      <seq>atacacactactgttcattgtatctttctttcttcttctccgactaatttcaaatctcaaataaatcttccccaaatttagaaagaacaaacaagcttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctgggttccatatggagcagccacgtactccagaaattgagcaaccaacaacctctatagatgatagttttcataagcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggaggaattgaagcaggggcaagcagtagatattccaaaatatgattttaagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtgtccgagatctgatgaatatgaagatatttgttgatacagatgctgatgtacgtcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80653" stop="86324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80953" g_stop="81053" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="265" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="357" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="427" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="546" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85743" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="643" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86007" g_stop="86024" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="661" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E306516" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80953" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85743"/>
          <exon e_start="86007" e_stop="86024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTACTTGGATGTTCTGCTTTAGTTCTTGACATACGAGCATGTTGTATCCCTCCATATCTACTGGACAGTGCTTTATGTTGGGTCTTCTACTTGTGTGGTTTCATCATCTTAAATTTTCAGTGCAGATGCTGATGTACGTCTTG</genome_strand>
        <mrna_strand>ATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAG.......................................................................................................................................................................................................................................................................ATGCTGATGTACGTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470842" ref_strand="+" ref_description="SGN-E470842 [cSTB-21-A7]">
      <seq>cactactgttcattgtatctctctttcttcttctccaactgatttcaaatctcaaataaatcttccccaaatttagaacgaacaaacaaacttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctggattccatatggagcagccatgtactccagaaattgagcaaccaacaacctctatagatgatagtgttcataggcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggagttattgaagcaggggcaagcagtagatattccaaaatatgattataagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80658" stop="86004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80958" g_stop="81053" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="260" r_length="164" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="352" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="422" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="541" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85704" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="599" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E470842" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80958" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTG</genome_strand>
        <mrna_strand>CACTACTGTTCATTGTATCTCTCTTTCTTCTTCTCCAACTGATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAACGAACAAACAAACTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGATTCCATATGGAGCAGCCATGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTGTTCATAGGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGTTATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTATAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466549" ref_strand="+" ref_description="SGN-E466549 [cPRO-24-H4]">
      <seq>ctactgttcattgtatctctctttcttcttctccaactgatttcaaatctcaaataaatcttccccaaatttagaacgaacaaacaaacttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctggattccatatggagcagccatgtactccagaaattgagcaaccaacaacctctatagatgatagtggtcataggcaacccttcatcattggcgttgctggaagtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgaggtgtactaattaaccaagattctttttatcatactttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80660" stop="84983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80960" g_stop="81053" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="258" r_length="164" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="350" r_length="92" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84683" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="374" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E466549" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80960" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84683"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACT</genome_strand>
        <mrna_strand>CTACTGTTCATTGTATCTCTCTTTCTTCTTCTCCAACTGATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAACGAACAAACAAACTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGATTCCATATGGAGCAGCCATGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTGGTCATAGGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAAGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGGTGTACTAATTAACCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573504" ref_strand="+" ref_description="SGN-E573504 [32825]">
      <seq>cattgtatctctctttcttcttctccaactgatttcaaatctcaaataaatcttccccaaatttagaacgaacaaacaaacttcagcttggtaacatcggggatgcttggttatggtggaggatcgtggatgtgtgagctgaggctaacggtgcagtgagttatagtgtgatgttttacgagtttgaagtaggatgcagcaatgtcatgtttatctatttagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctggattccatatggagcagccacttactccagaaattgagcaaccaacaacctctatagatgatagtgttcataggcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgtagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattattgtgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80668" stop="85524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80968" g_stop="81053" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="81289" i_length="236">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81290" g_stop="81425" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="222" r_length="136" r_score="0.926"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81426" i_stop="83016" i_length="1591">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="386" r_length="164" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="478" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="548" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85193" g_stop="85224" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="580" r_length="32" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E573504" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80968" e_stop="81053"/>
          <exon e_start="81290" e_stop="81425"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85224"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTG</genome_strand>
        <mrna_strand>CATTGTATCTCTCTTTCTTCTTCTCCAACTGATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAACGAACAAACAAACTTCAG............................................................................................................................................................................................................................................CTTGGTAACATCGGGGATGCTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTAACGGTGCAGTGAGTTATAGTGTGATGTTTTACGAGTTTGAAGTAGGATGCAGCAATGTCATGTTTATCTATTTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGATTCCATATGGAGCAGCCACTTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTGTTCATAGGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGTAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTATTGTGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321936" ref_strand="+" ref_description="SGN-E321936 [cTOB-29-O19]">
      <seq>tctttcttcttctccgactaatttcaaatctcaaataaatcttccccaaatttagaaagaacaaacaagcttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctgggttccatatggagcagccacgtactccagaaattgagcaaccaacaacctctatagatgatagttttcataagcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggaggaattgaagcaggggcaagcagtagatattccaaaatatgattttaagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtgtccgagatctgatgaatatgaagatatttgttgatacagatgctgatgtacgtcttgcgaggagaataagacgtgacacagctgaaaagggaagagatattagtatggtgcttgatcagtactctaagtttgtgaaagctgcttttgatgacttcattcttcctacnaagaagtatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80679" stop="86998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80979" g_stop="81053" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="239" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="331" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="401" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="520" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85743" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="617" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86007" g_stop="86086" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="697" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="86087" i_stop="86636" i_length="550">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="86637" g_stop="86698" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="759" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E321936" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80979" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85743"/>
          <exon e_start="86007" e_stop="86086"/>
          <exon e_start="86637" e_stop="86698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTACTTGGATGTTCTGCTTTAGTTCTTGACATACGAGCATGTTGTATCCCTCCATATCTACTGGACAGTGCTTTATGTTGGGTCTTCTACTTGTGTGGTTTCATCATCTTAAATTTTCAGTGCAGATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAGGTTAGGAAAACTTTCAGGCTTATTTGAAAAAAGTGGGGATCTTTCACTCAAATTTGACAGATATTTGATAAAGCATTTCTTGAGTTTCTTACTCTTCCAACATATTACATTTTGTTTATAACGAAGACCAGTGACTTGATGACTACGAACCTAATGGAAATTTGGGCTTATAAGGCCAAATGTCATAAGTTAGGATTTCTAACTTCTGACTTTTGGCTTATCTTTGTTCTTTTAGCTTGAAAACAAGTGCTTAAAATCACTTATTTTCTTTTACCGAAAATGCTTAAAAACACCTAAATAAGCCAATCAAAATAGGCTCTAAGTTCCTTCCTCAGTTCATTTCTGTGAAACTTCCATTATGAGTTTCTAAAATTGCCTTTTTTCTAATAAGCTCAATAAAAACCATTTCTTCTTTAACTGATGATTCAACTTCCATCCATCTATTAAGTTTCTAATTGCATTTTTGAAGTTGATTGTCATCGGATTAGCATGATTTTTATGCCTAGGTGTTTGGTTTTCACTAATAATTTGAGTTAAATCTTTGATGCAGTACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGA</genome_strand>
        <mrna_strand>TCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAG.......................................................................................................................................................................................................................................................................ATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACNAAGAAGTATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320035" ref_strand="+" ref_description="SGN-E320035 [cTOB-21-G1]">
      <seq>tctttcttcttctccgactaatttcaaatctcaaataaatcttccccaaatttagaaagaacaaacaagcttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctgggttccatatggagcagccacgtactccagaaattgagcaaccaacaacctctatagatgatagttttcataagcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80679" stop="85031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80979" g_stop="81053" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="239" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="331" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="401" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="84793" i_length="64">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="84794" g_stop="84803" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="410" r_length="9" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E320035" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80979" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="84794" e_stop="84803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATG</genome_strand>
        <mrna_strand>TCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG................................................................AT-GCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332497" ref_strand="+" ref_description="SGN-E332497 [cTOD-17-J20]">
      <seq>tttcttcttctccgactaatttcaaatctcaaataaatcttccccaaatttagaaagaacaaacaagcttcagagcttaaaaccaacagatgggttcaaatgcagttgatgatttgatagaagcgtcatcaggagttcattattctgggttccatatggagcagccacgtactccagaaattgagcaaccaacaacctctatagatgatagttttcataagcaacccttcatcattggcgttgctggaggtgctgcatctggcaagacaacagtttgtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggaggaattgaagcaggggcaagcagtagatattccaaaatatgattttaagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtgtccgagatctgatgaatatgaagatatttgttgatacaggttctttcatctcctttcttttgatgttcctttattattggtgtggcatgagttgttccctctcattgacatgttaccatgatgtactagagaaaaattagcataatgtcctagtagtcatctcatatagtattctttttacttggatgttctgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="80681" stop="86200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80981" g_stop="81053" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83017" g_stop="83180" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="237" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84029" g_stop="84120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="329" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="399" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="518" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85647" g_stop="85900" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="772" r_length="254" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E332497" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80981" e_stop="81053"/>
          <exon e_start="83017" e_stop="83180"/>
          <exon e_start="84029" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAGGTATCATCAATCTTCTTTTTATGTATACTTTTTATCTGTAAATCTGCATTCACGTTATCAATTTATGCTTTTCCAGTTGTTACGAGCTGTTTATGTTTATTGTTCAGTTCAATTTTGAATCTAGAAAGTTTGTTTTACGATCTATAATCCGTATTTGCTGATTAATTTGATTGTTTCTAGAGTTTTTTTGATTTCTAGTTTAATTTGATGATTGTGCTATTTCCTGTTCCTCATAGCTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAGGTGAGAGATAGATTATACAAATTTACTAGGAGATGTACTAGAAGCAGTGGTTATGTAACTTGCTATCGTCTAGACTCATTAAGATCTATGAATTATATTTACTCAAACGATGTAGCAGATCATGTTCAATATCGTATATACGAGGAGGTTGCTGCGTGTTGATGTATATCCATTTAGGATTCAGATTATCACATATTATTTTGATGGGAACTTAAATGGAACGCGAATATGATGGGTTAGAGGTTGGAGTTGAAGGAAAGAAAGTGATGGTGCAGGGGTTGACGGTTTCCAGAATACAGTTGGGGTGTTTGAGCTAATGTTAGTGAGCTAAACTGTGGCTATAATTCTCTATCTAGAGATATGCATTATGCATTGTTGAATTCCCTTGCACTCAAGGGTGTAGCCTAGTGGTCTATGAAGTGGGTAGATAATCTTGAGGTCCTAGGTTCAAATTCTAGTGGAAACAAAAACTACTAGGTGATTTCTTCGCATTTGCCTAAGCTTTGGTGGGAAGAGTTACTGGGTACTTGTATGGGTGGGTAATCGGTGGAATAGTCGAGGTGTGCACAAGCTAGCTCATGAGGTTAGAATTGCCTAAAATCTTGTAAGGAATGCAACAAGTTCCACATTCCACTCGATGTGGGAATGCAACAAGTTCCAAATTAGAATATCAACTATGGCATTCCATAATCTTTTCAAATATCATTGTATAAATTCCTTGCCCCAATCCCGCAATGATGACCAAGTTGGTTGAGCGAGTGATCTCCCAAATGGAGGGTTTCAGGTTCGAACCCCCCTACATACTTTCTTGGTGAAACTCGTTGTGTGGGGCTTGCCAGTTTACCTCTCTTGTGTGATTGGCGAGCTAATTGGAGCAGGGCTGCAAGTTCCCTTGACAAAAACAACCTAGCTCCACCATTGCAAACTTGATCATTTTCCTATACACATTGTCTTACTTATGCACACTTAAGTATCAAGGAATCATGAAGAATGGACTTCAGTTTCTTGATATCCAACTGAGTTGGTCTCACAAGATACCACGGTAGGCCGATATGAGTGGATTCTTTTGCAGAATTAGCTTTCTTGGAGACATAATTAATTCCTTTTTGATGCTTGGGCCATAACTTTTGAAGGTGTTTGCCTAGGCACCAAGATAAGCCAACCCACTATAAAGCCTAGATGTTTAATGTGTCTGCTAAACTTTTATCTCTTTGATTCATAACTTCCCTCTTGTACACTAAAAATGCATAATTCAGACGTAAATGTGTCATAGAAGCATAATTGTCTTGCAGCTTGTACTGTAGGTATCAAAAAATATAATTTATAAAAAACTAGATGAATTTTTACAAAGAGCAAACAGTGTTATGATGAGAAAGACGTGATATTCTCACTCGAAATGCCTAGGCAACAGGCCAGGACACTGCCCAGGCTTGCTCACCATCTCAATCATGCTTTAAAATTGAAACAAAAAAAGAAGAGAAAAGTTTCTGGTATTAGTATATTACTAACCATCTTTCCAATTAGTGATACTGGTATCTATCTTTTATAGAAGCTTGTAGTCCATCACTGATTGTTGGTAACTTAAATGCAGAGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTGGTATGTATACACAGTGGTATCTCTCTTGTTGTCACCTGAGCATTGTTTTTTTCAAATAAGGGTCTTCAGCATTGTCAATTCACTTTTGCAATTGCAGAAATTGAAAAAAAAGGACTACTTATCCCAATATCAATTCAATTGTTGTTCTCCTCAGCAATTCTTGGAATGTTTCTTTGTGATGTTCATTTTTTATGATTCCCAGAGCAAAGGATATGTTTGCTTAAGAAACTGACAATAATTTATTCAAGCTTTTATCACGTGTACATCAATTGATAGTGTTCGCTTCAATATGAATGTTAAAATTTGAAAATATGGTAGAGCTATTCATGGATGCATATAACGTCGGGATGACAAGGGGCTACAATCTTGAGCAGCATTGAAATCTAGTCTGCCTTTTTGCCTGCTTGTAAGTGATTTAGTTGGCTATCTGGTTTGGCTTAGAACTTTGTGGGAATCTTTCTTTGACATTGGATTCGGCTGCCTTTCAGATGAAGTTAACACAAAATTGATTATGCTGGGTATGTGTAAAGAAAATTCTCAATATAGATTTTGCACTCAATCCTTCTATTTGCCTACTGTTAGAACATGTCAATGGAGTTGGTTCAATTGTTTTTGTGTGCACATTGTTGGTCAACCGAGCAGTTTATGATTTTCATTCTCAGGAAGTGTGTCAGGAATATGGGTGGTGATGAAAATTGATTATCTGGATTTTCAGTTGAATCATAAAACTTCAAGCAATTTTTCAACTTAATCTTTCCATCAGATTCAAGGCTATAAATGCTATTTGTATTTCTTTTGCTTGGTACATATTTTCTTAATCATGCTCATAAAATATGTTTCACCGGCAGGCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTC-TTTTACTTGGATGTTCTGCTT</genome_strand>
        <mrna_strand>TTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGGTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAG-AAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTTACTTGGATGTTCTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210462" ref_strand="+" ref_description="SGN-E210462 [cLEC-35-E22]">
      <seq>gtgatttaattattgagcagcttcgtgatcagcgagttgtactagttaaccaggattctttttatcatactttgactcctgaagaactgacaaaagttcatgagtacaactttgaccatcctgatgcatttgacaccgaaaaattgttgcgtgtggtggaggaattgaagcaggggcaagcagtagatattccaaaatatgattttaagagttacaaaaatgacgtattccctcttcgaagggtcaatccttcagatgttataatcttggaaggcatactcatctttcacgatccacgtgtccgagatctgatgaatatgaagatatttgttgatacagatgctgatgtacgtcttgcgaggagaataagacgtgacacagctgaaaagggaagagatattagtatggtgcttgatcagtactctaagtttgtgaaagctgcttttgatgacttcattcttcctacaaagaagtatgctgatgttatcattccccgaggtggagacaatcatgttgctatcgattggattgtgcaacacattcggacaaaacttggtcaacatgatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="83768" stop="87087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84068" g_stop="84120" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84660" g_stop="84729" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="123" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85193" g_stop="85311" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="242" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85647" g_stop="85743" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="339" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86007" g_stop="86086" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="419" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="86087" i_stop="86636" i_length="550">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86637" g_stop="86787" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="570" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E210462" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84068" e_stop="84120"/>
          <exon e_start="84660" e_stop="84729"/>
          <exon e_start="85193" e_stop="85311"/>
          <exon e_start="85647" e_stop="85743"/>
          <exon e_start="86007" e_stop="86086"/>
          <exon e_start="86637" e_stop="86787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAGGTGGGTTTCTTCGGACTGGAAAGAAGTCGTTTCTTTATTTTGATGAACAAGTTTAAGCTTACAGCTAAATCATCCCTAGTATGAACAGATAGTATCATGATCTTCTCCATACAGCTTTTTTAGCTGCCTTCATTCTCTTATCTCTTCCTATTGAGTCTATAACTATTTATAATGTGTTTATAGCTCCTCTTTTCTTGTTTCTTCTTGATATGATGATTGGTTAGCTAGGTCTTCTATATCTCAATTTTCTCTAGGTGTTTTTTTCTGCATATTCCCCCTTCAATTTTTGATAATTTTAAAGTAATAAACCAAACTTATATTTCATCTATCTTTAAGATCAATAAGAACTTTTTGGTTGAATTACTGATTTTATCGGTCTTCATGTGAGATGTTTTCCCAACAGAAGTTGTGGGAAAAAATACGGCTTAAGAGGATTTAGAATGATATTTCTATTTAACAAGTCGTAAATGCTAGATTTCTATATTTTAGTTTGCACAAATTCATTCTCTGATTTATCTAACCCAATTTTGAATTTGCAGGATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTGGTTAGTCTAGTCCATTTTATTTGAGTTAAATTCAGTCTCAATTGTTTATGGTTTAATTTCCCAGATAGAAAATGACACTTGGTATTACTTTTAGGAAAAAGCATCTCTATAGTCTATATGTGTCATTTTTTTTCTTCTCAAAATCGTTCTTGCATTTGTCTATAAAAATATTTATGAATTGAAATTGGACTCTCTTGAACAGGATTAGTTCTGACCTCGAAGAAGTATGTTTATGTGTTCAAGACCTGTGGCTTGGAACTGTCCTCAATTTTATTGGAAATCCTTCTTAATTAATGATGATAATTTCTGGTGATTGAGTTTTGATTTATAGTGTTCATACATGTGTAAACTATTTGAAATTGTTTAATATTTATGTATCATTTGTTTGAATTATTAAGTATCAGATACATGTTATAAGATACTGTTTGCTGTAAGTTTCATGATTCTCTTTCTTATTGTTCAGATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGGGTAAATCTTCATAGCATGATTTTATTTTGTTTCATTTTATTGCATACGTCATCCAACTTTCTAAAGAATACATCAATTTCTGTTTATCTTAGTCAACATTTAAACTCCCTCATCTTTTTGCACTATTTCTTTCTTCCAATTTAATACCTTATCTAAAAATATTTAAAAGGAAGAAAGAGGGATTGGATTCCTATGACACAGAAAACACATACGTCTCTAGATAGACAGCTGGATATATAGGTAGAGACACACAATTGCCTGCATTTCGAGTTGTAGCTGTCTTTTTTCAGAATTCTCCATTAGTGCCAATTCACCTTCTTTATTTTACTTGGTAGGTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTACTTGGATGTTCTGCTTTAGTTCTTGACATACGAGCATGTTGTATCCCTCCATATCTACTGGACAGTGCTTTATGTTGGGTCTTCTACTTGTGTGGTTTCATCATCTTAAATTTTCAGTGCAGATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAGGTTAGGAAAACTTTCAGGCTTATTTGAAAAAAGTGGGGATCTTTCACTCAAATTTGACAGATATTTGATAAAGCATTTCTTGAGTTTCTTACTCTTCCAACATATTACATTTTGTTTATAACGAAGACCAGTGACTTGATGACTACGAACCTAATGGAAATTTGGGCTTATAAGGCCAAATGTCATAAGTTAGGATTTCTAACTTCTGACTTTTGGCTTATCTTTGTTCTTTTAGCTTGAAAACAAGTGCTTAAAATCACTTATTTTCTTTTACCGAAAATGCTTAAAAACACCTAAATAAGCCAATCAAAATAGGCTCTAAGTTCCTTCCTCAGTTCATTTCTGTGAAACTTCCATTATGAGTTTCTAAAATTGCCTTTTTTCTAATAAGCTCAATAAAAACCATTTCTTCTTTAACTGATGATTCAACTTCCATCCATCTATTAAGTTTCTAATTGCATTTTTGAAGTTGATTGTCATCGGATTAGCATGATTTTTATGCCTAGGTGTTTGGTTTTCACTAATAATTTGAGTTAAATCTTTGATGCAGTACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGATGTTATCATTCCCCGAGGTGGAGACAATCATGTTGCTATCGATTTGATTGTGCAACACATTCGGACAAAACTTGGTCAACATGATCTTT</genome_strand>
        <mrna_strand>GTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG...............................................................................................................................................................................................................................................................................................................................................GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAG.......................................................................................................................................................................................................................................................................ATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGATGTTATCATTCCCCGAGGTGGAGACAATCATGTTGCTATCGATTGGATTGTGCAACACATTCGGACAAAACTTGGTCAACATGATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420725" ref_strand="+" ref_description="SGN-E420725 [STM-31-N7]">
      <seq>ggaaaagcaggtgttgactccaactggatctgtttacagtggtgttgatttttgtaagaggttatgtggtgtttcagtaattagaagtggagagagcatggagaatgccttgcgagcatgttgtaaaggtatcaagattggcaagatcctgatccatcgagagggtgacaacggtcagcagctgatctatgagaaactaccactagatattgcagagagacatgtcctgctgttggatcccatcctcggaacaggttagtttttaagagtgctctggatatcagataactgaccatgcgcttcatccacactaggcgtggatgaactacatcatcaagattttacgataattcttatcaaaagtttacatgagcaaagcttgttatgtgtctatacacagggaattcagctgttcaagctatttcattactgctgaagaagggtgtcccagagtccaacattntattcctcaatctcatttctgcacctcaaggagtacatgtggtgtgcaagcggtttccaagaataaagattgtgacatctgagatagaaattggtctgaatgacgattttcgtgttattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="86888" stop="89593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87188" g_stop="87213" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87214" i_stop="87959" i_length="746">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.666" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87960" g_stop="88020" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="87" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88021" i_stop="88573" i_length="553">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88574" g_stop="88667" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="181" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88668" i_stop="88772" i_length="105">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88773" g_stop="89076" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="483" r_length="302" r_score="0.918"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89077" i_stop="89193" i_length="117">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89194" g_stop="89293" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="583" r_length="100" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E420725" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87188" e_stop="87213"/>
          <exon e_start="87960" e_stop="88020"/>
          <exon e_start="88574" e_stop="88667"/>
          <exon e_start="88773" e_stop="89076"/>
          <exon e_start="89194" e_stop="89293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGCAGGTGTTGACTCCAACTGGTAAGCTGCAACTGTAATTTATTGATATTCATGCCCTTCTATTTAGAAATCTTATTCAGAGCATCTTTCATTACTACATTTTATATAGTAAGGTTATTGAAATTAGGTCCAAAAAGCAGGCTTTATGGTGATCTTCTTAGGACAGATGAGAGTGTGGATACAATTATGATACTTGGCCATGGTTTCTGAAGTCATGACTGATATCAAGAAAAAATGGCTGAATTGTAACTGGAAAAAGCCTAGGCATTATAATGCATCAGTGCAGTACGACTAATGTTACTGTATTGGTCAAAGTATGGCACTGGTCACTGTAACATTGGGATGTTACAAGATAGCATTGCTTACAGTATTAAGTTTAAACAACCCATAGGGTTATTGTTGAAGACACTACTTTCCCCGCAAAGATATTTTCTTTTACAGTTGTTGGATTGTATATGTAAGGCATCATAAAACATTACTGATCCTATAGCGGTTAGAAAAAAACTAGCTACACGTTTTCCTCCTTTAATTTGTGTCAGCTCTTGAAAATTTGTTCGTTGCAGTACTTCATTTTGGTCAATTTCAATACTTGAATCATGATTTTAACATTTTATTCTAAAGTCATATTCTCGGGATTCTAGGAGTGGGTTTTATGCAACTTTTGTTTCTTCGTGGAGTTTAATCTTTTTCTATATACCCAGTTAAGTGGGAATAGCTTCAACGAGCAAAAATAAATTCTTAATGAGATGTATTTCTTATGAGTGCAGGATCTGTTTACAGTGGTGTTGATTTTTGTAAGAGGTTATGTGGTGTTTCAGTAATTAGAAGGTGAGTTTGTAATTGGCATTTCCCTTGCTTTTCCTGTATGGTAGTACTAATTGCTTTAGAGCAAAAGGACTTTCTGATATTTGTAATGGTGTTGTATGCGTGTATATATGTTGGTCCATGTAATTTGGTAACCTTCATTAGATTGAGTGATTGATTGTATGGTTGTCCATGTCCTTTATGCCTATGTTGTTCACTTGTTCTATTGGTATATTATGTCCCAAACTTGGCTCGTTTAGTAGATCGAATTCAATGGTCTGTGCATGTGTGAAGCTCAGATATATTTCACGTGGAGCATCATGTTAGTGATTAAAACTGAAGATAACAAATGACAGTCTCTTATCTCAGAAGCATATTCATTGCGGAGAAACTTCATTTTGCATTTTTTTAGGATAAATACTTGCTACATGGCAGGACAATCGCTTAATGGTCATCCAGTTTCTAGTAGAGAATCTAATTAACAAGTTTTTGTTTCTGTGTCTTCTCTGCCTTCACCAAAGTGATTGAATTGCTGTATTTTGTTTGTTTACCATAAAATTTTCTTAATTATACACAGTGGAGAGAGCATGGAGAATGCCTTGCGAGCATGTTGTAAAGGTATCAAGATTGGCAAGATCCTGATCCATCGAGAGGGTGACAACGGTCAGCAGGTCAGCAATCTGCAGGGTCCTCCCGAGTCGTTACCCTCCTGAGTCATTATATTGCCTTTTGCGCTCCCTGTGTTAAATTGATGCATTTTGTTAATAATGATGCAGCTGATCTATGAGAAACTACCACTAGATATTGCAGAAAGACATGTCCTGCTGTTGGATCCCATCCTCGGAACAGGTTAGTTTTTAAGAATGCTCCGGATATCAGATAACTGACCACGAGCTTCATCCACACCTACTGCTGGATGAACTACATCATCAAGATTTTACAATAATTTCTCATCAAAAGCTTACGTGAGCAAAACCTGTAACGTGTACATACACAGGGAATTCTGCTGTTCAAGCTATTTCGTTACTGCTGAAGAAGGGTGTCCCGGAGTCCAACATTTTATTCCTCAATCTCATTTCTGTAAGTTCACTGAATTATCCAGTACAGGCTTTGCATTTCTCTTAACTTTCTGCAATTACTACTTCTTGTGGTGTTCAACGGAGTTGTCGAATAATAACTGTTTTTCTTTAAAATTAGGCACCTCAAGGAGTCCATGTGGTGTGCAAGCGATTTCCAAGAATAAAGATTGTGACATCTGAGATAGAAATTGGCCTGAATGATGATTTTCGTGTTATTC</genome_strand>
        <mrna_strand>GGAAAAGCAGGTGTTGACTCCAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGTTTACAGTGGTGTTGATTTTTGTAAGAGGTTATGTGGTGTTTCAGTAATTAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAGAGCATGGAGAATGCCTTGCGAGCATGTTGTAAAGGTATCAAGATTGGCAAGATCCTGATCCATCGAGAGGGTGACAACGGTCAGCAG.........................................................................................................CTGATCTATGAGAAACTACCACTAGATATTGCAGAGAGACATGTCCTGCTGTTGGATCCCATCCTCGGAACAGGTTAGTTTTTAAGAGTGCTCTGGATATCAGATAACTGACCATGCGCTTCATCCACA-CTAGGCGTGGATGAACTACATCATCAAGATTTTACGATAA-TTCTTATCAAAAGTTTACATGAGCAAAGCTTGTTATGTGTCTATACACAGGGAATTCAGCTGTTCAAGCTATTTCATTACTGCTGAAGAAGGGTGTCCCAGAGTCCAACATTNTATTCCTCAATCTCATTTCT.....................................................................................................................GCACCTCAAGGAGTACATGTGGTGTGCAAGCGGTTTCCAAGAATAAAGATTGTGACATCTGAGATAGAAATTGGTCTGAATGACGATTTTCGTGTTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420726" ref_strand="-" ref_description="SGN-E420726 [STM-31-N7]">
      <seq>caggttagtttttaagagtgctctggatatcagataactgaccatgcgcttcatccacactaggcgtggatgaactacatcatcaagattttacgataattcttatcaaaagtttacatgagcaaagcttgttatgtgtctatacacagggaattcagctgttcaagctatttcattactgctgaagaagggtgtcccagagtccaacattttattcctcaatctcatttctgcacctcaaggagtacatgtggtgtgcaagcggtttccaagaataaagattgtgacatctgagatagaaattggtctgaatgacgattttcgtgttattcctgggatgggtgagtttggtgatcgatattttggcacagacgatgactaaacgaagagttgtggcccctccataccccgcaatcacataatgggagatgtaacgttcaattccaattcaaatttttttttacgatcttttaaaagaaaagagtaagatgagcatgatgaaaacacttgtgtaacggataaatggacattttgaagcataatttgagtatacaagccttataaaaaagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="88543" stop="89821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88843" g_stop="89076" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89077" i_stop="89193" i_length="117">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89194" g_stop="89485" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="520" r_length="288" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E420726" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420726" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88843" e_stop="89076"/>
          <exon e_start="89194" e_stop="89485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTTAGTTTTTAAGAATGCTCCGGATATCAGATAACTGACCACGAGCTTCATCCACACCTACTGCTGGATGAACTACATCATCAAGATTTTACAATAATTTCTCATCAAAAGCTTACGTGAGCAAAACCTGTAACGTGTACATACACAGGGAATTCTGCTGTTCAAGCTATTTCGTTACTGCTGAAGAAGGGTGTCCCGGAGTCCAACATTTTATTCCTCAATCTCATTTCTGTAAGTTCACTGAATTATCCAGTACAGGCTTTGCATTTCTCTTAACTTTCTGCAATTACTACTTCTTGTGGTGTTCAACGGAGTTGTCGAATAATAACTGTTTTTCTTTAAAATTAGGCACCTCAAGGAGTCCATGTGGTGTGCAAGCGATTTCCAAGAATAAAGATTGTGACATCTGAGATAGAAATTGGCCTGAATGATGATTTTCGTGTTATTCCTGGGATGGGTGAGTTTGGTGATCGATATTTTGGAACAGACGATGACTAAACGAAGAGTTGTGGCCCCCTCCATACCCCGCAATCACATAATGAGAGATGTAACGTTCTATTCCAATTCAATTTTTTTAAAAAGATCTTTTAAAAGAAAAAAAGTAAGATGAGCATATGGTGAAAACACTTGTGTAACGGAC</genome_strand>
        <mrna_strand>CAGGTTAGTTTTTAAGAGTGCTCTGGATATCAGATAACTGACCATGCGCTTCATCCACA-CTAGGCGTGGATGAACTACATCATCAAGATTTTACGATAA-TTCTTATCAAAAGTTTACATGAGCAAAGCTTGTTATGTGTCTATACACAGGGAATTCAGCTGTTCAAGCTATTTCATTACTGCTGAAGAAGGGTGTCCCAGAGTCCAACATTTTATTCCTCAATCTCATTTCT.....................................................................................................................GCACCTCAAGGAGTACATGTGGTGTGCAAGCGGTTTCCAAGAATAAAGATTGTGACATCTGAGATAGAAATTGGTCTGAATGACGATTTTCGTGTTATTCCTGGGATGGGTGAGTTTGGTGATCGATATTTTGGCACAGACGATGACTAAACGAAGAGTTGTGG-CCCCTCCATACCCCGCAATCACATAATGGGAGATGTAACGTTCAATTCCAATTCAAATTTTTTTTTACGATCTTTTAAAAG-AAAAGAGTAAGATGAGC--ATGATGAAAACACTTGTGTAACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738613" ref_strand="+" ref_description="SGN-E738613 [LC14BC08]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaaggcacagtgaaacttaaatgcatgaacaaattggaagtgcttaagccatggacactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="92775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="749" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92475" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="915" r_length="166" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E738613" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>915</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738613" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTG-AACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGT</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAAGGCACAGTGAAACTTAAATGC-ATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740382" ref_strand="+" ref_description="SGN-E740382 [LC21AG07]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="92696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="749" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92396" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="836" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E740382" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCA</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738738" ref_strand="+" ref_description="SGN-E738738 [LC14DC09]">
      <seq>gatagaggcatactagcctcgagcttttatcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcttgaatgccaagaacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcggagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89887" stop="92695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.803"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.989" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="446" r_length="381" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="748" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92395" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="834" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E738738" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATC</genome_strand>
        <mrna_strand>GATAGAGGCATAC-TAGCCTCGAGCTTTTATCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCTTGAATGCCAAGAACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCGGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730457" ref_strand="+" ref_description="SGN-E730457 [LA24AG08]">
      <seq>gttggctgcttccccttttttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagtagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89881" stop="92695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="749" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92395" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="835" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E730457" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATC</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCCCTTTTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGTAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740501" ref_strand="+" ref_description="SGN-E740501 [LC21CG07]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="92694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="749" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92394" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="834" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E740501" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727044" ref_strand="+" ref_description="SGN-E727044 [LA13CC09]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="92676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="749" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92376" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="816" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E727044" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGC</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728755" ref_strand="+" ref_description="SGN-E728755 [LA18DD07]">
      <seq>gttggctgcttccttagctttanccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaggagtgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="91885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91585" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="648" r_length="201" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E728755" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTG</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTANCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAGGAGTGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725559" ref_strand="+" ref_description="SGN-E725559 [LA04AC03]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaatggagagctgtgttgaaattgnggctactgagccttcagaatgtncattcagcaaatgctcagggctagctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="91778"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91478" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="536" r_length="89" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E725559" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCG</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCC-AATGGAGAGCTGTGTTG-AAATTGNGGCTACTGAGCCTTCAGAA-TGTNCATTCAGC-AAATGCTCA-GGGCTAGCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725639" ref_strand="+" ref_description="SGN-E725639 [LA04BF10]">
      <seq>gttggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaatggagagctgtgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="91716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90163" g_stop="90228" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="447" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91416" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="478" r_length="31" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E725639" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90163" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTG</genome_strand>
        <mrna_strand>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCC-AATGGAGAGCTGTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E407601" ref_strand="+" ref_description="SGN-E407601 [PPI-7-J18]">
      <seq>gttggctgcttccttagctttatccaaagcattatccttttaccacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaggaatgccaagtacatatcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgttgatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttagtcaactccttttcacttcaccaaatgctcttccttacctatctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagagaacaatgttgttcctgggattaaggtggacaagggcacagaggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgagcacagtactacaaaacacgtgctcgatatgcgataatttgccaagaaaatggacttgtgccaattgtggagccagaaattctgactgatggaaatcatgatatcaagaaatgtgcagctgctactgaaactgttcttgctgctgtttataaggcactcaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89863" stop="91916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="78" r_length="65" r_score="0.862"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="459" r_length="381" r_score="0.929"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.864" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91395" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="470" r_length="11" r_score="0.818"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91396" i_stop="91482" i_length="87">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91483" g_stop="91616" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="604" r_length="134" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E407601" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91395"/>
          <exon e_start="91483" e_stop="91616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGA</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTACCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAGGAATGCCAAGTACATATCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTGATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTAGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTATCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAGAACAATGTTGTTCCTGGGATTAAGGTGGACAAGGGCACAGAGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGAGCACAGTACTACAAAACAC.........................................................................................................................................................................................................................................GTGCTCGATAT.......................................................................................GCGATAATTTGCCAAGAAAATGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACTGATGGAAATCATGATATCAAGAAATGTGCAGCTGCTACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464356" ref_strand="+" ref_description="SGN-E464356 [cPRO-17-D8]">
      <seq>gcttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagagaacaatgttgttcctgggattaatgtggacaagggcacagtggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaaagcagatgatgttatttacagtcatatgctgttagagggaacagaagtgtaattatttaactacattatgtctcgacgacgtgctcgttttgccaagtggagagctgtgttgattattgcggctactgagccatcagaattgtctattcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89873" stop="91756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="71" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="452" r_length="381" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91309" i_length="158">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91310" g_stop="91456" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="599" r_length="147" r_score="0.844"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E464356" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91310" e_stop="91456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGAT-TTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGC</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAGAACAATGTTGTTCCTGGGATTAATGTGGACAAGGGCACAGTGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG..............................................................................................................................................................ATGATGTTATTTACAGTCATATGCTGTTAGAGGGAACAGAA-GTGTAATTATTTAACTACATTATGTCTCGACGACGTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGATTATTGCGGCTACTGAGCCATCAGAATTGTCTATTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464101" ref_strand="+" ref_description="SGN-E464101 [cPRO-17-A9]">
      <seq>gcttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagagaacaatgttgttcctgggattaaggtggacaaaggcacagtggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaaagcagaggatgttatttaaagtcatatgctgttagagggaacagaagtttaattatttaactacattatgtctcgacaaagtgctcgttttgccaagtggagagctgtgttgaaaattggggctactgagccttcagaattgtctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89873" stop="91751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="71" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="452" r_length="381" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91309" i_length="158">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91310" g_stop="91451" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="594" r_length="142" r_score="0.880"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E464101" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91310" e_stop="91451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGAT-TTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCAT</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAGAACAATGTTGTTCCTGGGATTAAGGTGGACAAAGGCACAGTGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG..............................................................................................................................................................AGGATGTTATTTAAAGTCATATGCTGTTAGAGGGAACAGAA-GTTTAATTATTTAACTACATTATGTCTCGACAAAGTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412206" ref_strand="+" ref_description="SGN-E412206 [STM-15-N4]">
      <seq>cttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttgtgatggaaagccatttgttgaacttcttcaagaaaacaatgttgtccctgggattaaggtggacaagggtaccgtggaattggctgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaagtggagagctgtgttgaaaattggggctactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89873" stop="91733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="70" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="451" r_length="381" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91433" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="500" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E412206" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGA</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTGTGATGGAAAGCCATTTGTTGAACTTCTTCAAGAAAACAATGTTGTCCCTGGGATTAAGGTGGACAAGGGTACCGTGGAATTGGCTGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGAAAATTGGGGCTACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408984" ref_strand="+" ref_description="SGN-E408984 [PPI-12-F4]">
      <seq>ctagctttttgggttctcgtcctttttcagttggctgcttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagagaacaatgttgttcctgggattaaggtggacaagggcacagtggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89834" stop="91446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="107" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91146" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="483" r_length="376" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E408984" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E408984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAA</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAGAACAATGTTGTTCCTGGGATTAAGGTGGACAAGGGCACAGTGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471571" ref_strand="+" ref_description="SGN-E471571 [cSTB-24-B9]">
      <seq>cttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttgtgatggaaagccatttgttgaacttcttcaagaaaacaatgttgtccctgggattaaggtggacaagggtaccgtggaattggctgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89873" stop="91444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="70" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91144" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="444" r_length="374" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E471571" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTAC</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTGTGATGGAAAGCCATTTGTTGAACTTCTTCAAGAAAACAATGTTGTCCCTGGGATTAAGGTGGACAAGGGTACCGTGGAATTGGCTGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470226" ref_strand="+" ref_description="SGN-E470226 [cSTB-17-I24]">
      <seq>cttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttgtgatggaaagccatttgttgaacttcttcaagaaaacaatgttgtccctgggattaaggtggacaagggtaccgtggaattggctgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89873" stop="91442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="70" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91142" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="442" r_length="372" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E470226" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACT</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTGTGATGGAAAGCCATTTGTTGAACTTCTTCAAGAAAACAATGTTGTCCCTGGGATTAAGGTGGACAAGGGTACCGTGGAATTGGCTGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E407292" ref_strand="+" ref_description="SGN-E407292 [PPI-6-J23]">
      <seq>ggctggttccttagctttatccaaagcattatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaaatactggcactattggaaaacggttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtggtattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89866" stop="91316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90164" g_stop="90228" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="75" r_length="65" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91016" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="321" r_length="246" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E407292" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>311</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90164" e_stop="90228"/>
          <exon e_start="90771" e_stop="91016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAAC</genome_strand>
        <mrna_strand>TTAGCTTTATCCAAAGCATTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAATACTGGCACTATTGGAAAACGGTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGGTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729419" ref_strand="+" ref_description="SGN-E729419 [LA21AA06]">
      <seq>ggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataattttccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89866" stop="92694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90166" g_stop="90228" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="444" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="746" r_length="302" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92394" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="831" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E729419" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>831</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90166" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</genome_strand>
        <mrna_strand>GGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTTCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725501" ref_strand="+" ref_description="SGN-E725501 [LA03DC12]">
      <seq>ggctgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcacttggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcactttcgtgaactcctttttcaattcaccaaatgctctttcttaacatctctggtgttattcttctttgaagaaacacttttaccaaagcactttttgatggaaagccgtttgttgaactttcttcaagagaaccacgttgttccttgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaacttcaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcagtgctcgttttgccaaaggagagctgtgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89866" stop="91716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90166" g_stop="90228" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="452" r_length="389" r_score="0.932"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.864" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91416" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="483" r_length="31" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E725501" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90166" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCAC-TGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCAC-TTCGTGAACTCC-TTTTCACTTCACCAAATGCTCTTCCTT-ACCTCTCTGGTGTTATTC-TCTTTGAAGAAACAC-TTTACCAAAGCAC-TTCTGATGGAAAGCCGTTTGTTGAAC-TTCTTCAAGAGAACCATGTTGTTCC-TGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTG</genome_strand>
        <mrna_strand>GGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTTCGTGAACTCCTTTTTCAATTCACCAAATGCTCTTTCTTAACATCTCTGGTGTTATTCTTCTTTGAAGAAACACTTTTACCAAAGCACTTTTTGATGGAAAGCCGTTTGTTGAACTTTCTTCAAGAGAACCACGTTGTTCCTTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTTCAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCA-.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAA-GGAGAGCTGTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725809" ref_strand="+" ref_description="SGN-E725809 [LA05DB07]">
      <seq>gctgcttccttacctttatcctttaggcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89867" stop="91795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90167" g_stop="90228" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="443" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91495" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="554" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E725809" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90167" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCC</genome_strand>
        <mrna_strand>GCTGCTTCCTTACCTTTATCCTTTAGGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726572" ref_strand="+" ref_description="SGN-E726572 [LA12AH05]">
      <seq>cggcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcangaggacagagtgaggaagaagcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89868" stop="92787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90168" g_stop="90228" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="442" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="744" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92487" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="922" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E726572" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>922</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90168" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTG</genome_strand>
        <mrna_strand>CGGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCANGAGGACAGAGTGAGGAAGAAGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730603" ref_strand="+" ref_description="SGN-E730603 [LA24CE08]">
      <seq>cgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgcccaggatagtgttcttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89870" stop="92695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90169" g_stop="90228" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="441" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="743" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92395" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="829" r_length="86" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E730603" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90169" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATC</genome_strand>
        <mrna_strand>CGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCCAGGATAGTGTTCTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730107" ref_strand="+" ref_description="SGN-E730107 [LA23AD02]">
      <seq>tgcttccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89869" stop="91981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90169" g_stop="90228" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="441" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91681" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="738" r_length="297" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E730107" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90169" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCC</genome_strand>
        <mrna_strand>TGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725554" ref_strand="+" ref_description="SGN-E725554 [LA04AB06]">
      <seq>gcttacttagcttatccttttagcacaaccatgtttgcctttgtgggaaaatataccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggttttaggagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgggaaaacattgaaccaaatatcagacacttcgagaactccttttcacttcaccaaatgctctacttacctctctggcgtgattctctttgaagaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttaagagaacatgtagttcctgggattaaggttgaaagggtaccgtggatttggctgcgccaatggtgagaccacactatggattcactcgatgagtgacgttgtgcacagtactacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89870" stop="91447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90170" g_stop="90228" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91147" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="421" r_length="363" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E725554" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.036" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90170" e_stop="90228"/>
          <exon e_start="90771" e_stop="91147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAA</genome_strand>
        <mrna_strand>GCTTACTTAGC-TTATCCTTTTAGCACAACCATGTTTGCCTTTGTGGGAAAATATACCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGT-TTTAGG-AGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATG-GGAAAACATTGAACCAAAT-ATCAGACACTTCGAGAACTCCTTTTCACTTCACCAAATGCTC-TACTTACCTCTCTGGCGTGATTCTCTTTGAAG-AACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTT-AAGAGAA-CATGTAGTTCCTGGGATTAAGGTTGA-AAGGGTACCGTGGATTTGGCTGCG-CCAATGGTGAGACCAC-ACT-ATGGATTC-ACTCGATGAGTG-ACGTTGTGCACAGTACTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323372" ref_strand="+" ref_description="SGN-E323372 [cTOC-10-G23]">
      <seq>cttccttagctttatccttttagcacaaccgtgtctgcgtttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89871" stop="91464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90171" g_stop="90228" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="439" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91397" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="452" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E323372" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90171" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGC</genome_strand>
        <mrna_strand>CTTCCTTAGCTTTATCCTTTTAGCACAACCGTGTCTGCGTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731163" ref_strand="+" ref_description="SGN-E731163 [LA26BD02]">
      <seq>ccttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89874" stop="91928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90174" g_stop="90228" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="436" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91628" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="680" r_length="244" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E731163" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90174" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCT</genome_strand>
        <mrna_strand>CCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727299" ref_strand="+" ref_description="SGN-E727299 [LA14BB12]">
      <seq>cttagctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaaaaagcaacagtgaacttaaatgcaatgaacaaattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89875" stop="92752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90175" g_stop="90228" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="435" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="737" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92452" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="880" r_length="143" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E727299" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90175" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGA</genome_strand>
        <mrna_strand>CTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAAAAGCAACAGTGAACTTAAATGCAATGAACAAATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E367603" ref_strand="+" ref_description="SGN-E367603 [cLPT-14-C19]">
      <seq>atctttatccttttagcacaaccatgtctgcctttgtgggaaaatatgctgaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccagaacacttctgatggaaagccgttgttgaactccttcaagagaacaatgttgttcctgggatcaaggttgacaagggtaccgtggatttggctggtaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaagtgctcgttttgccaagtggagagctgtgttgaaaattggggctactgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89878" stop="91734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90178" g_stop="90228" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="431" r_length="380" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91434" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="481" r_length="50" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E367603" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90178" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAG</genome_strand>
        <mrna_strand>ATCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAGAACACTTCTGATGGAAAGCCG-TTGTTGAACTCCTTCAAGAGAACAATGTTGTTCCTGGGATCAAGGTTGACAAGGGTACCGTGGATTTGGCTGGTACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAA.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGAAAATTGGGGCTACTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728445" ref_strand="+" ref_description="SGN-E728445 [LA17DD06]">
      <seq>gctttatccttttacacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagatattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagctaacatggtcacccctggctctgatagccccaaggttgcagcagaggtaatagcagagtacacggtcacagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89879" stop="92647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90179" g_stop="90228" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="430" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="731" r_length="301" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92347" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="769" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E728445" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90179" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGC</genome_strand>
        <mrna_strand>GCTTTATCCTTTTA-CACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGATATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAG-CTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAGGTAATAGCAGAGTACACGGTCACAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730333" ref_strand="+" ref_description="SGN-E730333 [LA23DC03]">
      <seq>acccttttagccaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89884" stop="92694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90184" g_stop="90228" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="425" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="727" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92394" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="812" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E730333" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90184" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</genome_strand>
        <mrna_strand>ACCCTTTTAGC-CAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728025" ref_strand="+" ref_description="SGN-E728025 [LA16BH05]">
      <seq>atccttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttctttcttgaagaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgcccggacgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89884" stop="92664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90184" g_stop="90228" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="426" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="728" r_length="302" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92364" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="783" r_length="55" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E728025" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90184" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTC-TTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGC</genome_strand>
        <mrna_strand>ATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTTCTTGAA-GAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCCGGACGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727274" ref_strand="+" ref_description="SGN-E727274 [LA14AH11]">
      <seq>cttttagcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89887" stop="92681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90187" g_stop="90228" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="423" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="725" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92381" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="797" r_length="72" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E727274" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90187" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGG</genome_strand>
        <mrna_strand>CTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726201" ref_strand="+" ref_description="SGN-E726201 [LA11AE05]">
      <seq>cggcacaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaaacttaaatgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89893" stop="92739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90191" g_stop="90228" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="419" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="721" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92439" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="722" r_stop="852" r_length="131" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E726201" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>851</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726201" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90191" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92439"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTG-AACTTAAATGCAA</genome_strand>
        <mrna_strand>CGGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAAACTTAAATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726489" ref_strand="+" ref_description="SGN-E726489 [LA11DH02]">
      <seq>agcaaccatgtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcangaggacagagtgaggaagaaggcacagtgaacttaaatgcaatgaacaaattggaagtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="89896" stop="92758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90194" g_stop="90228" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="416" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="718" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92310" g_stop="92458" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="867" r_length="149" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E726489" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90194" e_stop="90228"/>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAACCATGTCTGCCTTTGTGGGAAAATATGCCGGTAAACTTCTCTTCAAAATTTAAACTTTATGAATTCATAATTAATATAATATTTACGATAAAATATTTATTCATATTAAGTGAATTTTTTTACTTATATATACATATATAGGTCGGTAATTTCTTTTTATTAAATTTATGTGAATTCATATATATATATATATATTTGTGGTTTTCGTAAATCCTATATAAAAAACGAGTTGGTCTTGGTAAATAAATACGTACATATTTTGCTAGCCAGCATGCAAGGGCAGTAACGGTCCTTTAAGGTACGTGAGAATGTATATTTTACATAGTACGTGGTACATATATTGTCATGCATGTATATAAAGCCAACCTATTATGTAAAGTATATATCTTGATTTCAATTTTTACACATGTAGCATAAATACTAGATGCAATAGCCTTGTTCTTTTTAGGGTAACTAACAAATTAAATTGCGTTTACTTGTAATTAGACAGATAATATATATACGTGGGGTCGATGGCAAGATGTACACGTACCTTAAAGTATAATTCAACTCTTATCATGCTATAAATGCAGAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCT</genome_strand>
        <mrna_strand>AGCAACCATGTCTGCCTTTGTGGGAAAATATGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCANGAGGACAGAGTGAGGAAGAAGGCACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408477" ref_strand="+" ref_description="SGN-E408477 [PPI-11-O19]">
      <seq>gaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtacctggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagaagaaccaatgttgttcctgggattaaggtggacaagggcacagtggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaagtggagagctgtgttgaaaattggggctactgagccttcagaattgtctattcagcaaaatgctcaggggctagctcgttatgcgataatttgccaagaaaatggacttgtgccaattgtggagccagaaattctgactgatggaaatcatgatatcaagaaatgtgcagctgctactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcccaacatggtcacccctggctctgatagcccaaaggttgcagcagaagtaatagcagagtacacggtcacagccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90470" stop="92651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90770" g_stop="91151" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="687" r_length="302" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92351" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="729" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E408477" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E408477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90770" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCA-CTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAG-AGAACC-ATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTG</genome_strand>
        <mrna_strand>GAGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACCTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAAGAACCAATGTTGTTCCTGGGATTAAGGTGGACAAGGGCACAGTGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCTATTCAGCAAAATGCTCAGGGGCTAGCTCGTTATGCGATAATTTGCCAAGAAAATGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACTGATGGAAATCATGATATCAAGAAATGTGCAGCTGCTACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCCAACATGGTCACCCCTGGCTCTGATAGCCCAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E421765" ref_strand="+" ref_description="SGN-E421765 [STM-33-M2]">
      <seq>gaggaacttatcaagaatgccaagtacatagcaacaccagggaaaggtattttggcagcagatgaaagtactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaagcaaatcgtcaagcacttcgtcaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaaatacttctgatggaaagccatttgtggaacttcttcaagagaacaatgttgttcctgggattaaggtggacaagggcacagtggaattggccgggaccaatggcgagacgacaactcaagggctcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaagtggagagctgtgttgaaaattggggctactgagccttcagaattgtctattcagcaaaatgctcangggctagctcgttatgcgataatttgccaagaaaatggacttgtgccaattgtggagccagaaattctgactgatggaaatcatgatatcaagaaatgtgcagctgctactgaaaactgtcttgctgctgttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90470" stop="91901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90770" g_stop="91151" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91601" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="599" r_length="217" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E421765" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90770" e_stop="91151"/>
          <exon e_start="91385" e_stop="91601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTA</genome_strand>
        <mrna_strand>GAGGAACTTATCAAGAATGCCAAGTACATAGCAACACCAGGGAAAGGTATTTTGGCAGCAGATGAAAGTACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAAGCAAATCGTCAAGCACTTCGTCAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAATACTTCTGATGGAAAGCCATTTGTGGAACTTCTTCAAGAGAACAATGTTGTTCCTGGGATTAAGGTGGACAAGGGCACAGTGGAATTGGCCGGGACCAATGGCGAGACGACAACTCAAGGGCTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAGTGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCTATTCAGCAAAATGCTCANGGGCTAGCTCGTTATGCGATAATTTGCCAAGAAAATGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACTGATGGAAATCATGATATCAAGAAATGTGCAGCTGCTACTGAAAACTGTCTTGCTGCTGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726896" ref_strand="+" ref_description="SGN-E726896 [LA13AE10]">
      <seq>gtctgcctttgtgggaaaatatgccgaggaacttatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90448" stop="92694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90771" g_stop="91151" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="407" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="709" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92394" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="794" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E726896" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90771" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</genome_strand>
        <mrna_strand>AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731913" ref_strand="+" ref_description="SGN-E731913 [LA28CB10]">
      <seq>cgatcaagaatgccaagtacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcangaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90479" stop="92807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90777" g_stop="91151" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="677" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92507" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="875" r_length="198" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E731913" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>875</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90777" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGT</genome_strand>
        <mrna_strand>CGATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCANGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729747" ref_strand="+" ref_description="SGN-E729747 [LA21DH09]">
      <seq>gcacatagcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90493" stop="91444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90793" g_stop="91144" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E729747" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90793" e_stop="91144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTAC</genome_strand>
        <mrna_strand>GCACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726189" ref_strand="+" ref_description="SGN-E726189 [LA11AD03]">
      <seq>gcaacgccagggaaaggtattttggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcacgaggacagagtgaagaaaaagcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90500" stop="92787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90800" g_stop="91151" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="654" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92487" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="832" r_length="178" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E726189" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90800" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTG</genome_strand>
        <mrna_strand>GCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCACGAGGACAGAGTGAAGAAAAAGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729121" ref_strand="+" ref_description="SGN-E729121 [LA20AC02]">
      <seq>gcaacgccagggaaaggtattttcggcagcagatgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacactattgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90500" stop="92670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90800" g_stop="91151" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="655" r_length="302" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92370" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="716" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E729121" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90800" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACGCCAGGGAAAGGTATTTT-GGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAG</genome_strand>
        <mrna_strand>GCAACGCCAGGGAAAGGTATTTTCGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTATTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729238" ref_strand="+" ref_description="SGN-E729238 [LA20BG01]">
      <seq>atgaaagcactggcactattggaaaacgtttatcaagcattaatgttgaaaacattgaaccaaatcgtcaagcacttcgtgaactccttttcacttcaccaaatgctcttccttacctctctggtgttattctctttgaagaaacactttaccaaagcacttctgatggaaagccgtttgttgaacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgtgcttgctgctgtttataaggcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90531" stop="91910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90831" g_stop="91151" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91610" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="547" r_length="226" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E729238" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90831" e_stop="91151"/>
          <exon e_start="91385" e_stop="91610"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACT</genome_strand>
        <mrna_strand>ATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTGCTTGCTGCTGTTTATAAGGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728534" ref_strand="+" ref_description="SGN-E728534 [LA18AE09]">
      <seq>aacttcttcaagagaaccatgttgttcctgggattaaggttgacaagggtaccgtggatttggctgggaccaatggtgagaccacaactcaaggtttcgactcgttgggtgcacgttgtgcacagtactacaaagcaggtgctcgttttgccaaatggagagctgtgttgaaaattggggctactgagccttcagaattgtccattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgtttttatgttaaaaatttagtctttttaatttcaaaaatctttccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="90714" stop="93091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91014" g_stop="91151" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91686" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="440" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92310" g_stop="92791" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="923" r_length="483" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E728534" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>922</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91014" e_stop="91151"/>
          <exon e_start="91385" e_stop="91686"/>
          <exon e_start="92310" e_stop="92791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAGGTACGTGTGTGTTTGAACTCATTTTGATTTGATTTATGTGATTAATTACTTTGTTATGCTATATTTCAACACGCACTCTCACGTGCATCATGTGAAATGCATCTTTACAGAAATAAATATGTTATGTATCCAGAGGCTATTTAGATTAATTTATTCTTCTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATG-TTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATT</genome_strand>
        <mrna_strand>AACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG.........................................................................................................................................................................................................................................GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E421766" ref_strand="-" ref_description="SGN-E421766 [STM-33-M2]">
      <seq>tgttgaaaattggggctactgagccttcagaatgntctattcagcaaaatgctcaggggctagctcgttatgcgataattgccaagaaaatggacttgtgccaattgtggagccagaaattctgactgatggaaatcatgatatcaagaaatgtgcagctgctactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcccaacatggtcacccctggctctgatagcccaaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggtagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggaaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacgcttggaaagtatactggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattaggggaaggcaaaacttggagttgatgataacaggttatatactattgtctttgtgttgcttttaataacttctatatgttaaaaattgaatcgaggtatttcagacatctttccataaatggttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="91112" stop="93065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91412" g_stop="91686" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92310" g_stop="92802" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="763" r_length="489" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E421766" ref_strand="-">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421766" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91412" e_stop="91686"/>
          <exon e_start="92310" e_stop="92802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTT</genome_strand>
        <mrna_strand>TGTTGAAAATTGGGGCTACTGAGCCTTCAGAATGNTCTATTCAGCAAAATGCTCAGGGGCTAGCTCGTTATGCGATAATT-GCCAAGAAAATGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACTGATGGAAATCATGATATCAAGAAATGTGCAGCTGCTACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCCAACATGGTCACCCCTGGCTCTGATAGCCCAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGTAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGAAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACGCTTGGAAAGTATACTGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGGGGAAGGCAAAACTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTT-GTGTTGCTTTTAATAAC-TTCTATATGTTAAAAATTGAATCGAGGT-ATTTCAGACATCTTTCCA-TAAATGGTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708056" ref_strand="+" ref_description="SGN-E708056 [FA34CH12]">
      <seq>catttagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgttttatgttaaaaatttagtctttttaatttcaaaaatctttccattaagtaactcttgtaaattactgttcaaagtttatattcactttaccaagaaaaataggaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="91149" stop="93157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91449" g_stop="91686" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92310" g_stop="92863" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="792" r_length="554" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E708056" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91449" e_stop="91686"/>
          <exon e_start="92310" e_stop="92863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATA</genome_strand>
        <mrna_strand>CATTTAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTTACCAAGAAAAATAGGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707784" ref_strand="+" ref_description="SGN-E707784 [FA33DH05]">
      <seq>cattcagcaaaatgctcaggggctagctcgttacgcgataatttgccaagaaaacggacttgtgccaattgtggagccagaaattctgacagatggaaatcatgatatcaagaaatgtgcagcagccactgaaactgttcttgctgctgtttataaggcactcaatgaccagcatgttcttcttgaaggaacacttttgaagcctaacatggtcacccctggctctgatagccccaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgttttatgttaaaaatttagtctttttaatttcaaaaatctttccattaagtaactcttgtaaattactgttcaaagtttatattcacttaaccaagaaaataaagaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="91149" stop="93157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91449" g_stop="91686" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92310" g_stop="92863" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="792" r_length="554" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E707784" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91449" e_stop="91686"/>
          <exon e_start="92310" e_stop="92863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATA</genome_strand>
        <mrna_strand>CATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E624254" ref_strand="+" ref_description="SGN-E624254 [GI|37222954]">
      <seq>attcagcaaaatgctcaggggctagctcgttatgcgataatttgccaagaaaatggacttgtgccaattgtggagccagaaattctgactgatggaaatcatgatatcaagaaatgtgcagctgctactgaaactgttcttgctgctgtttataaggcacgcaatgaccagcatgttcttcttgaaggaacacttttgaagcccaacatggtcacccctggctctgatagcccaaaggttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggtagagctcttcagcaaagtactctcaagacttggtgtggaaaaaaagaaaatgttggcacagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatactggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="91150" stop="92972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91450" g_stop="91686" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92310" g_stop="92672" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="600" r_length="363" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E624254" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91450" e_stop="91686"/>
          <exon e_start="92310" e_stop="92672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAGGTTAGTAATTTATTAAGAATTAAAGTTATATACATGGAGATCGTACAAGATTTTTATACAGTTACTGTATTGTAGCCTATGTTACGTTGCATGGATTCTTCAAAATGTTGTTGCACCACGCACTACTTCTAGAGGATCTGATGCCACTGACAACATTTTTGAAGAGTATGAGCAACATAGGTTGTTATAGTTAAATTGGATGAAAATGTAACTCGTCTAATCGGTTCTAGTTGGAATGTGTATATTCATGTGTAGGTTATATAGTTCAAATTATCATATCTTAAAGTTAGGACCAATTTGAGGGGCCTATTTATGGAGCTAATTGTATTATCCATTAGGAAACTTATCAAAAAGTGAGAAAAAGGATACTATAATTTTATTTGAGATCTGTTTGTTGTCAACTAGGCATGATAAATAAAAGAAAATGATTTCGTAAGTTTGATTTGATAAAAAGAAGGGACAATCCAGTGCACAAAGCATCCCATGTTCACACATGGTCCTATGAAGGGCCGCACCTCAAGGGAGTGTAATGTCAGCAACATAGACATGATCCATTATTGATATTGACGCGATGATTTAGTCCAATCTGCACATTTGACACCCGTTCTCATTCGTTATCTTAGGTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAG</genome_strand>
        <mrna_strand>ATTCAGCAAAATGCTCAGGGGCTAGCTCGTTATGCGATAATTTGCCAAGAAAATGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACTGATGGAAATCATGATATCAAGAAATGTGCAGCTGCTACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACGCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCCAACATGGTCACCCCTGGCTCTGATAGCCCAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGTAGAGCTCTTCAGCAAAGTACTCTCAAGACTTGGTGTGGAAAAAAAGAAAATGTTGGCACAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACTGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616056" ref_strand="+" ref_description="SGN-E616056 [65861]">
      <seq>cgagtttttttttttttttttttccaccccaagtcttgagggtactttgctgaagagctctaccaaatgaaaatgacagtgtccatggcttaagcacttccaatttgttcattgcatttaagttcactgttgcctcttcctcactctgtcctcctgataagaacactatccctggcactgctggtggcacggtccggcgcagggctgtgaccgtgtactctgctattacttctgctgcaacctttgggctatcagagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92839" stop="92008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92540" g_stop="92308" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="243" r_length="233" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E616056" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>233</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92540" e_stop="92308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTTTTTTCCACCCCAAGTCTTGAGGGTACTTTGCTGAAGAGCTCTTCCAAATGAAAATGACAGTGTCCATGGCTTAAGCACTTCCAATTTGTTCATTGCATTTAAGTTCACTGTTGCCTCTTCCTCACTCTGTCCTCCTGATAAGAACACTATCCCTGGCACTGCTGGTGGCACGGTCCGGCGCAGGGCTGTGACCGTGTACTCTGCTATTACTTCTGCTGCAACCT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTCCACCCCAAGTCTTGAGGGTACTTTGCTGAAGAGCTCTACCAAATGAAAATGACAGTGTCCATGGCTTAAGCACTTCCAATTTGTTCATTGCATTTAAGTTCACTGTTGCCTCTTCCTCACTCTGTCCTCCTGATAAGAACACTATCCCTGGCACTGCTGGTGGCACGGTCCGGCGCAGGGCTGTGACCGTGTACTCTGCTATTACTTCTGCTGCAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E540970" ref_strand="-" ref_description="SGN-E540970 [TUS-61-I8]">
      <seq>gttgcagcagaagtaatagcagagtacacggtcacagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgttttatgttaaaaatttagtctttttaatttcaaaaatctttccattaagtaactcttgtaaattactgttcaaagtttatattcacttaaccaagaaaataaagaaaaaaaatctatatatataaaaaacaataaactttgatgagtgaaaaaaaaaaaaaaaaaaaaaacgcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92010" stop="93198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92310" g_stop="92897" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="589" polyA_stop="607"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E540970" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540970" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="92310" e_stop="92897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATATATATAAAAAACAATAAACTTTGATGAGTGAAAG</genome_strand>
        <mrna_strand>GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATATATATAAAAAACAATAAACTTTGATGAGTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470815" ref_strand="+" ref_description="SGN-E470815 [cSTB-20-L5]">
      <seq>gtaatagcagagtacacggtctcagccctgcgccggaccgtgccaccagcagtgccagggatagtgttcttatcaggaggacagagtgaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggtagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggaaaagctcaagaagcatttttgacaaggtgcaaggctaattcagatgcaacgcttggaaactatactggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattaggggaaggcaaaacttggagttgatgataacaggttatatactattgtctttgtgttgcttttaataacttctatatgttaaaaattgaatctttttcatttcagacatctttccataagtaactcttgcaaattgttgttcaacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92022" stop="93122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92322" g_stop="92822" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E470815" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92322" e_stop="92822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTT</genome_strand>
        <mrna_strand>GTAATAGCAGAGTACACGGTCTCAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGTAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGAAAAGCTCAAGAAGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACGCTTGGAAACTATACTGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGGGGAAGGCAAAACTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTT-GTGTTGCTTTTAATAAC-TTCTATATGTTAAAAATTGAATCTTTTTCATTTCAGACATCTTTCCA-TAAGTAACTCTTGCAAATTGTTGTTCAACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236847" ref_strand="+" ref_description="SGN-E236847 [cLEL-7-N23](-)">
      <seq>agtgccagggatagtgttcttatcaggaggacagagtaggaagaggcaacagtgaacttaaagcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggaagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgttttatgttaaaaatttagtctttttaatttcaaaaatctttccattaagtaactcttgtaaattactgttcaaagtttatattcacttaaccaagaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92072" stop="93157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92372" g_stop="92858" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E236847" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92372" e_stop="92858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAAT</genome_strand>
        <mrna_strand>AGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGT-AGGAAGAGGCAACAGTGAACTTAAA-GCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E406571" ref_strand="+" ref_description="SGN-E406571 [PPI-4-A14]">
      <seq>agagagagagaggaagaggcaacagtgaacttaaatgcaatgaacaaattggaagtgcttaagccatggacactgtcattttcatttggtagagctcttcagcaaagtaccctcaagacttggggtggaaaaaaagaaaatgttggaaaagctcaagaagcatttttgacaaggtgcaaggctaattcagatgcaacgcttggaaactatactggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattaggggaaggcaaaacttggagttgatgataacaggttatatactattgtctttgtgttgcttttaataacttctatatgttaaaaattgaatctttttcatttcagacatctttccataagtaactcttgcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92101" stop="93107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92400" g_stop="92820" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E406571" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92400" e_stop="92820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAG</genome_strand>
        <mrna_strand>AGAGAGAGAGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGTAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGAAAAGCTCAAGAAGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACGCTTGGAAACTATACTGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGGGGAAGGCAAAACTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTT-GTGTTGCTTTTAATAAC-TTCTATATGTTAAAAATTGAATCTTTTTCATTTCAGACATCTTTCCA-TAAGTAACTCTTGCAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237027" ref_strand="+" ref_description="SGN-E237027 [cLEL-7-N23](-)">
      <seq>aagtgcttaagccatggacaactgtcattttcatttggaagagctcttcagcaaagtaccctccaagacttggggtggaaaaaaagaaaatgttggcaaagctcaagaggcatttttgacaaggtgcaaggctaattcagatgcaacacttggaaagtatacaggtggaagtggaagtggtgctgcttctgagagtctgtttgttaaaggttacaaatattagagggggaaaaaagttggagttgatgataacaggttatatactattgtctttggtattgattttaataacatgttttatgttaaaaatttagtctttttaatttcaaaaatctttccattaagtaactcttgtaaattactgttcaaagtttatattcacttaaccaagaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="+" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="92152" stop="93157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92452" g_stop="92858" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="+" ref_id="SGN-E237027" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92452" e_stop="92858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGCTTAAGCCATGGAC-ACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCT-CAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAAT</genome_strand>
        <mrna_strand>AAGTGCTTAAGCCATGGACAACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203362" ref_strand="+" ref_description="SGN-E203362 [cLEB-3-P3](-)">
      <seq>gctggagatggtgcagaaagtaggtgcacacttcccgatggcgtcagaaagtgacccttccaaccaatggcaaagaagtttaggaaagtgacttgcccatataaaaggcactttcctaaacacttttcttcagtttttgcaacttgataaaaacttttcaagaactcttgcaaaggctctacaaagtaaaggcagaattattccaagaacaacagcaatatcttgagcttttcgtctagttgtttaggaatatattctcttgttcttaaactgtaaaccattcctgaatctataaaggatttggtgtgttgtgttaaaagtctaggttgtccaggtgggatagcttagtgggtagattgttttctacttaggcttgttaagcaatagaggactattgcttaacggtaagattcataactctttcttacgtttggtgtaatcgtgttttacttttgcttttgaagattagtgaaaacgattgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="94907" stop="93824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94616" g_stop="94125" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="485" polyA_stop="501"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E203362" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94616" e_stop="94125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGAGACG-TACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCCAACCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGTTCCAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAGGCTACACAAAGAAAAGGCAGAATCATTCCTAGGACAACAGCAACATCTGGAGCTTTTCGTCTGGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAAATCTATAAAGGAATTGGTGTGTTGCGTTAAAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTTGGCTGGCCTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACGTTTGGTGTAATCGTGTTTCGCTTTTGCATTTGAAGATTAGTGAAAACGATTGAAA</genome_strand>
        <mrna_strand>GCTGGAGATGGTGCAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGA-AA--GTGACCCTTCCAACCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACACTTTTCTT-CAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAGGCTCTACAAAGTAAAGGCAGAATTATTCCAAGAACAACAGCAATATCTTGAGCTTTTCGTCTAGTTGTTTAGGAATATATTCTCTTGTTCTTAAACTGTAAACCATTCCTGAATCTATAAAGGATTTGGTGTGTTGTGTTAAAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTG-TTTTCTACTTAGGCT----TGTTAAGCAATAGAGGACTATTGCTTAACGGTAAGATTCATAACTCTTTCTTACGTTTGGTGTAATCGTGTTTTACTTTTGCTTTTGAAGATTAGTGAAAACGATTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546563" ref_strand="+" ref_description="SGN-E546563 [TUS-69-P22](-)">
      <seq>aactcaaatgttactttaactgtaaatgttatttgtagttttgatgatttgacaaacaatgggacctcataaaggtatcaggttctctaattgtgtattgcaggtgtcttgtttgaggtattgcagaagaaacaaaaccagggacctagtagaggtaccaggctctcatgaaaatgagtcagtcgactgccagctggagatggtacagaaagtaggtgcacacttcccgatggcgtcagaaaagtgtgaccttttcagcaaatggcaaaggagtttaggaaagtgacttgcccacataaaaggcactttccaaaacatttgttttttagtttttgcaacttgataaaaacttttcaagaacacttgcaaaggctacacaaaaggtagaatcattccaagaacaacagcaacatcttgagcttgtcgtatagttgtttaggaatttattctcttgttgttaaattgtaaaccactgctaaatctataaaggaattggtgtgttgtgtaaaagtctaggttgtccaagtgggatagcttagtgggtagattgtttttctacttaggcttgttgagcaatagaggactattgtttaacggtaagattgataactctttcttacgtttggtgaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0119A22-sriPP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0119A22.1" temp_strand="-" temp_description="C07SLm0119A22.1  AC210371.2 htgs_phase:3 submitted_to_sgn_as:C07SLm0119A22 upload_account_name:france">
        <position start="95106" stop="93870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94782" g_stop="94174" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="627" r_length="601" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="629" polyA_stop="648"/>
      <MATCH_line gen_id="C07SLm0119A22.1" gen_strand="-" ref_id="SGN-E546563" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0119A22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94782" e_stop="94174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTATTTGTAGTTTTGATGATTTGACAAACTTACGGACCTCATAAAGGTACCGGGTTTTCTACTTGAGTATTGCGGGTGTCTTCTTTGAAGTATTGCAGATGAAACAAACCCAGGGACCTAGTAGAGATACCAGGCCCTCATGATGATGAGCCAGTCAACTGCCAGCTGGAGA-CGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCCAACCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGTTCCAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAGGCTACACAAAGAAAAGGCAGAATCATTCCTAGGACAACAGCAACATCTGGAGCTTTTCGTCTGGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAAATCTATAAAGGAATTGGTGTGTTGCGTTAAAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTTGGCTGGCCTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACGTTTGGT</genome_strand>
        <mrna_strand>TGTTATTTGTAGTTTTGATGATTTGACAAACAATGGGACCTCATAAAGGTATCAGGTTCTCTAATTGTGTATTGCAGGTGTCTTGTTTGAGGTATTGCAGAAGAAACAAAACCAGGGACCTAGTAGAGGTACCAGGCTCTCATGAAAATGAGTCAGTCGACTGCCAGCTGGAGATGGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTTCAGCAAATGGCAAAGGAGTTTAGGAAAGTGACTTGCCCACATAAAAGGCACTTTCCAAAACATTTGTTTTTTAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACACTTGCAAAGGCTACAC----AAAAGGTAGAATCATTCCAAGAACAACAGCAACATCTTGAGCTTGTCGTATAGTTGTTTAGGAATTTATTCTCTTGTTGTTAAATTGTAAACCACTGCTAAATCTATAAAGGAATTGGTGTGTTGTG-TAAAAGTCTAGGTTGTCCAAGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTAGGCT----TGTTGAGCAATAGAGGACTATTGTTTAACGGTAAGATTGATAACTCTTTCTTACGTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>803</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5952" PGL_stop="4237"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5952" e_stop="5898"/>
            <exon e_start="5670" e_stop="5447"/>
            <exon e_start="5344" e_stop="5198"/>
            <exon e_start="4959" e_stop="4735"/>
            <exon e_start="4644" e_stop="4237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.904" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5952" e_stop="5898" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.686">
            <gDNA_intron_boundary i_start="5897" i_stop="5671" i_length="227"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5670" e_stop="5447" e_length="224"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.994">
            <gDNA_intron_boundary i_start="5446" i_stop="5345" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5344" e_stop="5198" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.951" acc_prob="0.904">
            <gDNA_intron_boundary i_start="5197" i_stop="4960" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4959" e_stop="4735" e_length="225"/>
          </exon>
          <intron i_serial="4" don_prob="0.963" acc_prob="0.986">
            <gDNA_intron_boundary i_start="4734" i_stop="4645" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.904">
            <gDNA_exon_boundary e_start="4644" e_stop="4237" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5952" stop="5898"/>
              <exon start="5670" stop="5447"/>
              <exon start="5344" stop="5198"/>
              <exon start="4959" stop="4788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4923" stop="4735"/>
              <exon start="4644" stop="4237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424560" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTGAGTATGGACAAGGACAACAATCAACTTCACCATGTGAGCATTTGCCTCAG : ACGAACTGCAAGACGGAAACTTTACGAGATCAAAAGGAAATGCTTGTGGAGAATTCAGTCTCAAGCTCTGTTCAATTACAAGAACTGCAAGAAAAACTTGATTTATTGAAAGCAGCAGTTGAAATGGCTTCTGATCACAAACATCCCAGTGACTTTTATGTGAATCAGCTAAACGATCAGGTGGAAGTGAAAAGGGGCAAAATTGTTGAAATGGAAAGTCACTG : CATTGATAGAAGCAAGGCCCTTGAGCAAAAGAAGGTTTCTCTTGAGGAAAAGTTAAGAGCAACAAATCCAGAGACCTATGAAAAATATAAAAAGGTGGAAGAGATTGAGTTGAAGTTGGAGAATATATTAGCCGAAAACAAAAGAAG : AGAGGAAGAACTCATTGTACTCTCAGCCAAGGCTGAGAAGCAGCCCAAATTACAACCTAGAAGAACCTACATTCAGCGTGTTGAAGAGATCACCAAAAACAGCCGGAAGCAGGATGTGGACATAGAAAGAATATTAAAAGAAACAAGGGAGCTTCAGTTAGAGAGCAACTTTGTCCAAGAACGGCTTAATCGAACTCGTGCAGTGGTTGATGAGACCGTGTTCAG : GGAGGTAAAAAAGGACCAAGTGGGAGAACAAGCTTACAGGATACTGACTAACATCCATGACAGCTTTGAACAAATAGCTGAAAATCTTCTTGCAACGGATAGAACTCGGCGAGAAGTGACTGATTATGAAGGTAAACTTGCAAACATGGCACCTCGAAGTGTTAATATTGACAAGCTGAAAGCAGATCTTGACACCATCAGGAGGGAAAATGATCTTCTAGAAAAGAAATTATCCTAAGACTCATCACAAAGTATAGGGTAGAACAGTTGGAGTTGATTGATTATTTAAGATGAATGTTATGAACACTGGGTTTTCATTTTATGCTGTAATGTTCTAGTAACACACACACACATACGCACATTGATCTACCTATCAACTTTTTGTGGAATCCATTGCCGGGTTATAAT</gDNA_template>
            <first_frame> F  *  V  W  T  R  T  T  I  N  F  T  M  *  A  F  A  S   : D  E  L  Q  D  G  N  F  T  R  S  K  G  N  A  C  G  E  F  S  L  K  L  C  S  I  T  R  T  A  R  K  T  *  F  I  E  S  S  S  *  N  G  F  *  S  Q  T  S  Q  *  L  L  C  E  S  A  K  R  S  G  G  S  E  K  G  Q  N  C  *  N  G  K  S  L  :  H  *  *  K  Q  G  P  *  A  K  E  G  F  S  *  G  K  V  K  S  N  K  S  R  D  L  *  K  I  *  K  G  G  R  D  *  V  E  V  G  E  Y  I  S  R  K  Q  K  K  :  R  G  R  T  H  C  T  L  S  Q  G  *  E  A  A  Q  I  T  T  *  K  N  L  H  S  A  C  *  R  D  H  Q  K  Q  P  E  A  G  C  G  H  R  K  N  I  K  R  N  K  G  A  S  V  R  E  Q  L  C  P  R  T  A  *  S  N  S  C  S  G  *  *  D  R  V  Q  :  G  G  K  K  G  P  S  G  R  T  S  L  Q  D  T  D  *  H  P  *  Q  L  *  T  N  S  *  K  S  S  C  N  G  *  N  S  A  R  S  D  *  L  *  R  *  T  C  K  H  G  T  S  K  C  *  Y  *  Q  A  E  S  R  S  *  H  H  Q  E  G  K  *  S  S  R  K  E  I  I  L  R  L  I  T  K  Y  R  V  E  Q  L  E  L  I  D  Y  L  R  *  M  L  *  T  L  G  F  H  F  M  L  *  C  S  S  N  T  H  T  H  T  H  I  D  L  P  I  N  F  L  W  N  P  L  P  G  Y  N </first_frame>
            <second_frame>  F  E  Y  G  Q  G  Q  Q  S  T  S  P  C  E  H  L  P  Q  :  T  N  C  K  T  E  T  L  R  D  Q  K  E  M  L  V  E  N  S  V  S  S  S  V  Q  L  Q  E  L  Q  E  K  L  D  L  L  K  A  A  V  E  M  A  S  D  H  K  H  P  S  D  F  Y  V  N  Q  L  N  D  Q  V  E  V  K  R  G  K  I  V  E  M  E  S  H  C :   I  D  R  S  K  A  L  E  Q  K  K  V  S  L  E  E  K  L  R  A  T  N  P  E  T  Y  E  K  Y  K  K  V  E  E  I  E  L  K  L  E  N  I  L  A  E  N  K  R  R :   E  E  E  L  I  V  L  S  A  K  A  E  K  Q  P  K  L  Q  P  R  R  T  Y  I  Q  R  V  E  E  I  T  K  N  S  R  K  Q  D  V  D  I  E  R  I  L  K  E  T  R  E  L  Q  L  E  S  N  F  V  Q  E  R  L  N  R  T  R  A  V  V  D  E  T  V  F  R :   E  V  K  K  D  Q  V  G  E  Q  A  Y  R  I  L  T  N  I  H  D  S  F  E  Q  I  A  E  N  L  L  A  T  D  R  T  R  R  E  V  T  D  Y  E  G  K  L  A  N  M  A  P  R  S  V  N  I  D  K  L  K  A  D  L  D  T  I  R  R  E  N  D  L  L  E  K  K  L  S  *  D  S  S  Q  S  I  G  *  N  S  W  S  *  L  I  I  *  D  E  C  Y  E  H  W  V  F  I  L  C  C  N  V  L  V  T  H  T  H  I  R  T  L  I  Y  L  S  T  F  C  G  I  H  C  R  V  I   </second_frame>
            <third_frame>   L  S  M  D  K  D  N  N  Q  L  H  H  V  S  I  C  L  R :   R  T  A  R  R  K  L  Y  E  I  K  R  K  C  L  W  R  I  Q  S  Q  A  L  F  N  Y  K  N  C  K  K  N  L  I  Y  *  K  Q  Q  L  K  W  L  L  I  T  N  I  P  V  T  F  M  *  I  S  *  T  I  R  W  K  *  K  G  A  K  L  L  K  W  K  V  T   : A  L  I  E  A  R  P  L  S  K  R  R  F  L  L  R  K  S  *  E  Q  Q  I  Q  R  P  M  K  N  I  K  R  W  K  R  L  S  *  S  W  R  I  Y  *  P  K  T  K  E   : E  R  K  N  S  L  Y  S  Q  P  R  L  R  S  S  P  N  Y  N  L  E  E  P  T  F  S  V  L  K  R  S  P  K  T  A  G  S  R  M  W  T  *  K  E  Y  *  K  K  Q  G  S  F  S  *  R  A  T  L  S  K  N  G  L  I  E  L  V  Q  W  L  M  R  P  C  S   : G  R  *  K  R  T  K  W  E  N  K  L  T  G  Y  *  L  T  S  M  T  A  L  N  K  *  L  K  I  F  L  Q  R  I  E  L  G  E  K  *  L  I  M  K  V  N  L  Q  T  W  H  L  E  V  L  I  L  T  S  *  K  Q  I  L  T  P  S  G  G  K  M  I  F  *  K  R  N  Y  P  K  T  H  H  K  V  *  G  R  T  V  G  V  D  *  L  F  K  M  N  V  M  N  T  G  F  S  F  Y  A  V  M  F  *  *  H  T  H  T  Y  A  H  *  S  T  Y  Q  L  F  V  E  S  I  A  G  L  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5951" stop="5898"/>
                    <exon start="5670" stop="5447"/>
                    <exon start="5344" stop="5198"/>
                    <exon start="4959" stop="4735"/>
                    <exon start="4644" stop="4407"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>885</number_coding_nucleotides>
                  <number_encoded_amino_acids>295</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEYGQGQQSTSPCEHLPQTNCKTETLRDQKEMLVENSVSSSVQLQELQEKLDLLKAAVEMASDHKHPSDFYVNQLNDQVEVKRGKIVEMESHCIDRSKALEQKKVSLEEKLRATNPETYEKYKKVEEIELKLENILAENKRREEELIVLSAKAEKQPKLQPRRTYIQRVEEITKNSRKQDVDIERILKETRELQLESNFVQERLNRTRAVVDETVFREVKKDQVGEQAYRILTNIHDSFEQIAENLLATDRTRREVTDYEGKLANMAPRSVNIDKLKADLDTIRRENDLLEKKLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="7732" PGL_stop="8632"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7732" e_stop="7930"/>
            <exon e_start="8000" e_stop="8283"/>
            <exon e_start="8418" e_stop="8632"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.636" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7732" e_stop="7930" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7931" i_stop="7999" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8000" e_stop="8283" e_length="284"/>
          </exon>
          <intron i_serial="2" don_prob="0.636" acc_prob="0.974">
            <gDNA_intron_boundary i_start="8284" i_stop="8417" i_length="134"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="8418" e_stop="8632" e_length="215"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7732" stop="7930"/>
              <exon start="8000" stop="8283"/>
              <exon start="8418" stop="8632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAGATGAAATCGAGGACTTGTCGTTGTCCCTTCCAACTGTTGGCTCAATGCAGATTGCTGGAAGTAACGGTTTTGGACATAACATAGAGTTCATGTCTCAAGCTTATCTTAGAAACAGAAGCTCTGAAATTGATATAGAAGTTGAACATGATACGTCTATCGCTCATATAGATCAACCTCTTCCCATATTCCTCAAG : TTTGCAAATGTGGAGTATAAGGTGAAGACTAATCAAGCTTTCTCCAACAATCCTGTCAAGGCAGTTGTCTCAAAGGTAGCTTCTCAGTTTGAAAATGATAATTACAAACATATACTCAAAGGTATAACGGGAAGCATTAGTCCCGGTGAAATTCTTGCCTTAATGGGACCTTCGGGCAGTGGAAAAACGACTTTGTTAAAGATACTGGGTGGAAGATTGCACGAAAATGTCAAAGGAACCGTCACTTACAATGACATTCCATATAGTCCAGCTCTGAAAAGAAG : GGTGGGTTTCGTGACACAAGATGATGTGCTTTTCCCACAATTGACGGTTGAGGAAACTTTAGTTTTTGCTGCATTCTTAAGACTTCCATGCAAGATGAGTCGACGTCAGAAGTATGAAAGAGTAGAAGTGATTATTAAGGAATTAGGCCTTGAAAGGTACTTTGTTATCCTTTCATGTACTTGAGTACTCACTAATAGCAACTACCGTTGCAACT</gDNA_template>
            <first_frame> T  R  *  N  R  G  L  V  V  V  P  S  N  C  W  L  N  A  D  C  W  K  *  R  F  W  T  *  H  R  V  H  V  S  S  L  S  *  K  Q  K  L  *  N  *  Y  R  S  *  T  *  Y  V  Y  R  S  Y  R  S  T  S  S  H  I  P  Q   : V  C  K  C  G  V  *  G  E  D  *  S  S  F  L  Q  Q  S  C  Q  G  S  C  L  K  G  S  F  S  V  *  K  *  *  L  Q  T  Y  T  Q  R  Y  N  G  K  H  *  S  R  *  N  S  C  L  N  G  T  F  G  Q  W  K  N  D  F  V  K  D  T  G  W  K  I  A  R  K  C  Q  R  N  R  H  L  Q  *  H  S  I  *  S  S  S  E  K  K  :  G  G  F  R  D  T  R  *  C  A  F  P  T  I  D  G  *  G  N  F  S  F  C  C  I  L  K  T  S  M  Q  D  E  S  T  S  E  V  *  K  S  R  S  D  Y  *  G  I  R  P  *  K  V  L  C  Y  P  F  M  Y  L  S  T  H  *  *  Q  L  P  L  Q   </first_frame>
            <second_frame>  Q  D  E  I  E  D  L  S  L  S  L  P  T  V  G  S  M  Q  I  A  G  S  N  G  F  G  H  N  I  E  F  M  S  Q  A  Y  L  R  N  R  S  S  E  I  D  I  E  V  E  H  D  T  S  I  A  H  I  D  Q  P  L  P  I  F  L  K  :  F  A  N  V  E  Y  K  V  K  T  N  Q  A  F  S  N  N  P  V  K  A  V  V  S  K  V  A  S  Q  F  E  N  D  N  Y  K  H  I  L  K  G  I  T  G  S  I  S  P  G  E  I  L  A  L  M  G  P  S  G  S  G  K  T  T  L  L  K  I  L  G  G  R  L  H  E  N  V  K  G  T  V  T  Y  N  D  I  P  Y  S  P  A  L  K  R  R :   V  G  F  V  T  Q  D  D  V  L  F  P  Q  L  T  V  E  E  T  L  V  F  A  A  F  L  R  L  P  C  K  M  S  R  R  Q  K  Y  E  R  V  E  V  I  I  K  E  L  G  L  E  R  Y  F  V  I  L  S  C  T  *  V  L  T  N  S  N  Y  R  C  N  </second_frame>
            <third_frame>   K  M  K  S  R  T  C  R  C  P  F  Q  L  L  A  Q  C  R  L  L  E  V  T  V  L  D  I  T  *  S  S  C  L  K  L  I  L  E  T  E  A  L  K  L  I  *  K  L  N  M  I  R  L  S  L  I  *  I  N  L  F  P  Y  S  S  S :   L  Q  M  W  S  I  R  *  R  L  I  K  L  S  P  T  I  L  S  R  Q  L  S  Q  R  *  L  L  S  L  K  M  I  I  T  N  I  Y  S  K  V  *  R  E  A  L  V  P  V  K  F  L  P  *  W  D  L  R  A  V  E  K  R  L  C  *  R  Y  W  V  E  D  C  T  K  M  S  K  E  P  S  L  T  M  T  F  H  I  V  Q  L  *  K  E   : G  W  V  S  *  H  K  M  M  C  F  S  H  N  *  R  L  R  K  L  *  F  L  L  H  S  *  D  F  H  A  R  *  V  D  V  R  S  M  K  E  *  K  *  L  L  R  N  *  A  L  K  G  T  L  L  S  F  H  V  L  E  Y  S  L  I  A  T  T  V  A  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7733" stop="7930"/>
                    <exon start="8000" stop="8283"/>
                    <exon start="8418" stop="8601"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QDEIEDLSLSLPTVGSMQIAGSNGFGHNIEFMSQAYLRNRSSEIDIEVEHDTSIAHIDQPLPIFLKFANVEYKVKTNQAFSNNPVKAVVSKVASQFENDNYKHILKGITGSISPGEILALMGPSGSGKTTLLKILGGRLHENVKGTVTYNDIPYSPALKRRVGFVTQDDVLFPQLTVEETLVFAAFLRLPCKMSRRQKYERVEVIIKELGLERYFVILSCT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="12672" PGL_stop="13361"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12672" e_stop="13361"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="12672" e_stop="13361" e_length="690"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12672" stop="13361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12672" stop="13213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12729" stop="13166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724598" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATTCCCATTGGGGGATTCACAAATCTGACAAATTCTTCCTCTGTCAGCTTAGTCCAAAAATACACTCAACCCTGCAAATTCCCTTTAAAAAATCTTACTGTAAAACTTAAAGTCACCATTAATGGTGAATCAAGAAAGTCAATCTTAAGAATTTTCCCATTTTTGAACAACCATAGTCATAAAGATTGAGTCTTTTGAGTTTTCTGAGGAAAAAAAAGCTATCTTTATCAGAAATTAATGGAGCTGGTGCCTTATTCAGACCCAAAAGCTGAATCAAGTGTTGTTAATCCACCTTGGGAAGATATGTTTAGATCAGCTTCAATGAGGAAACCAGAAGAACCAAAGCCCCAGAACCAGGTCCCTTCAGAGGCTCAGCCAAGAAAAGAAAATGAACCAAATCAAGATTCAGTGTCTGCTGACCCTCAGGTGAGACTAGCCCTTTATATAGCTATGGCTCATGCTGGACTTGTATTTACATTTTTCATTATTTATGGTGTTGGTAAATTGCTTGAAGAGTATTTGAGAGCTATGTTATGGGCTGTGCTTTGTTCAATTCCATTAAGGGGAATTCAACAAACCCTTGTTGCATTTTGGTCTGAACCTTTGAAGTTAGGTCTTACTGAGACTATTTTAGCTGTCCCTGTAGCTGTTTTCAGTGTTTTTCTAGGGACCCTTGTTGATATTAA</gDNA_template>
            <first_frame> K  N  S  H  W  G  I  H  K  S  D  K  F  F  L  C  Q  L  S  P  K  I  H  S  T  L  Q  I  P  F  K  K  S  Y  C  K  T  *  S  H  H  *  W  *  I  K  K  V  N  L  K  N  F  P  I  F  E  Q  P  *  S  *  R  L  S  L  L  S  F  L  R  K  K  K  L  S  L  S  E  I  N  G  A  G  A  L  F  R  P  K  S  *  I  K  C  C  *  S  T  L  G  R  Y  V  *  I  S  F  N  E  E  T  R  R  T  K  A  P  E  P  G  P  F  R  G  S  A  K  K  R  K  *  T  K  S  R  F  S  V  C  *  P  S  G  E  T  S  P  L  Y  S  Y  G  S  C  W  T  C  I  Y  I  F  H  Y  L  W  C  W  *  I  A  *  R  V  F  E  S  Y  V  M  G  C  A  L  F  N  S  I  K  G  N  S  T  N  P  C  C  I  L  V  *  T  F  E  V  R  S  Y  *  D  Y  F  S  C  P  C  S  C  F  Q  C  F  S  R  D  P  C  *  Y  * </first_frame>
            <second_frame>  K  I  P  I  G  G  F  T  N  L  T  N  S  S  S  V  S  L  V  Q  K  Y  T  Q  P  C  K  F  P  L  K  N  L  T  V  K  L  K  V  T  I  N  G  E  S  R  K  S  I  L  R  I  F  P  F  L  N  N  H  S  H  K  D  *  V  F  *  V  F  *  G  K  K  S  Y  L  Y  Q  K  L  M  E  L  V  P  Y  S  D  P  K  A  E  S  S  V  V  N  P  P  W  E  D  M  F  R  S  A  S  M  R  K  P  E  E  P  K  P  Q  N  Q  V  P  S  E  A  Q  P  R  K  E  N  E  P  N  Q  D  S  V  S  A  D  P  Q  V  R  L  A  L  Y  I  A  M  A  H  A  G  L  V  F  T  F  F  I  I  Y  G  V  G  K  L  L  E  E  Y  L  R  A  M  L  W  A  V  L  C  S  I  P  L  R  G  I  Q  Q  T  L  V  A  F  W  S  E  P  L  K  L  G  L  T  E  T  I  L  A  V  P  V  A  V  F  S  V  F  L  G  T  L  V  D  I   </second_frame>
            <third_frame>   K  F  P  L  G  D  S  Q  I  *  Q  I  L  P  L  S  A  *  S  K  N  T  L  N  P  A  N  S  L  *  K  I  L  L  *  N  L  K  S  P  L  M  V  N  Q  E  S  Q  S  *  E  F  S  H  F  *  T  T  I  V  I  K  I  E  S  F  E  F  S  E  E  K  K  A  I  F  I  R  N  *  W  S  W  C  L  I  Q  T  Q  K  L  N  Q  V  L  L  I  H  L  G  K  I  C  L  D  Q  L  Q  *  G  N  Q  K  N  Q  S  P  R  T  R  S  L  Q  R  L  S  Q  E  K  K  M  N  Q  I  K  I  Q  C  L  L  T  L  R  *  D  *  P  F  I  *  L  W  L  M  L  D  L  Y  L  H  F  S  L  F  M  V  L  V  N  C  L  K  S  I  *  E  L  C  Y  G  L  C  F  V  Q  F  H  *  G  E  F  N  K  P  L  L  H  F  G  L  N  L  *  S  *  V  L  L  R  L  F  *  L  S  L  *  L  F  S  V  F  F  *  G  P  L  L  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12883" stop="13359"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKKSYLYQKLMELVPYSDPKAESSVVNPPWEDMFRSASMRKPEEPKPQNQVPSEAQPRKENEPNQDSVSADPQVRLALYIAMAHAGLVFTFFIIYGVGKLLEEYLRAMLWAVLCSIPLRGIQQTLVAFWSEPLKLGLTETILAVPVAVFSVFLGTLVDI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="13995" PGL_stop="15862"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13995" e_stop="14757"/>
            <exon e_start="15473" e_stop="15862"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13995" e_stop="14757" e_length="763"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="14758" i_stop="15472" i_length="715"/>
          </intron>
          <exon e_serial="2" e_score="0.928">
            <gDNA_exon_boundary e_start="15473" e_stop="15862" e_length="390"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13995" stop="14757"/>
              <exon start="15473" stop="15550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14126" stop="14757"/>
              <exon start="15473" stop="15588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432769" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14127" stop="14422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14372" stop="14757"/>
              <exon start="15473" stop="15859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432770" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14664" stop="14757"/>
              <exon start="15473" stop="15736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418124" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15536" stop="15862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614062" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCCCCTCTCCTTATGCAGAGAAACTCTTAAGCCTGAAAAGGAGGGTTAAAGATCGTGAATGGGCACAAATATATACAGAAGTGGATGTAATGTTCAGGGAACTTCTGATCACTAGAGAGGACTTGGTTGAGAAAGCCAAAGGGTTCGCTCTCCAAGGAGTAAATGTAATGCAACGGATACTGGTTAGTAGCACATCTGTCTTAGGTGGGAGCATGAAGGTCATGTTCTTGATCGGGAATTCCATCGTTTCGGGTGCTGCTGGTCTTTTTAATTTTGTATCTCAGCTAATGGTATTCATTTGGGTACTTTATTATCTCATCACATCGGATTCTGGTGGAGTAACAGAACAAGTCATGTCTATGCTCCCTATGTCACATTCCGCAAGGAGGCGAAGTGTTGAGGTTCTTGACAAAGCTATTTCTGGGGTTCTTCTAGCAACTGCTGAGATTGCACTCTTTCAGGGGTGTCTAACTTGGCTCTTGTTCAGATTATTCTCCATACATTTTTTGTACATGTCAACAATCCTCGCATTTCTTAGTCCTTTGTTTCCTATTTTCCCATCACTGTTTTCAACTATCCCAGCTGCTTTACAGTTGGTGCTTGAAGGTCAATATGTATTGGCCATCAGCTTATCAATTATACATCTCGTACTTATGGACTATGGTACATCCGAAATCATGGAGGATATACCTGGCTATAACGCGTATCTCACTGGTCTCAGCATTATTGGAGGAATGACATTGTTCCCTTCAGCATTTGAG : GGAGCAATAATGGGACCACTGATAACTACTGTTGTGATCGCGATTAAAGATTTGTATGTTGAATTTGTATTGGAAGAACAGAAGGAATAAGCAGAACAAATCTGTGTTTGCAATGCCTGAACCTTTGAAGACATTGAGAAGAACCCCCTATTACTTTCTTTGATGGAAAAACATCGCAAGATAAAGTGAATTCTTTTTTCTCCCAGTCAACTATTGTTTGTATTCTACCTGTGTTTGAGGATTTTTTTTTTCTCTCAGAAAAAGCTGTTTATAGTGTGCAGAAAATTGGTAAATTATTAAAATTGGAGTATAGAATTGTGCATTGTATCTTCTTTGTAAAACCTTTAATCTTTTGAAGAGAAATAGAATTGTTTTGACATGTCATTTTCC</gDNA_template>
            <first_frame> I  P  L  S  L  C  R  E  T  L  K  P  E  K  E  G  *  R  S  *  M  G  T  N  I  Y  R  S  G  C  N  V  Q  G  T  S  D  H  *  R  G  L  G  *  E  S  Q  R  V  R  S  P  R  S  K  C  N  A  T  D  T  G  *  *  H  I  C  L  R  W  E  H  E  G  H  V  L  D  R  E  F  H  R  F  G  C  C  W  S  F  *  F  C  I  S  A  N  G  I  H  L  G  T  L  L  S  H  H  I  G  F  W  W  S  N  R  T  S  H  V  Y  A  P  Y  V  T  F  R  K  E  A  K  C  *  G  S  *  Q  S  Y  F  W  G  S  S  S  N  C  *  D  C  T  L  S  G  V  S  N  L  A  L  V  Q  I  I  L  H  T  F  F  V  H  V  N  N  P  R  I  S  *  S  F  V  S  Y  F  P  I  T  V  F  N  Y  P  S  C  F  T  V  G  A  *  R  S  I  C  I  G  H  Q  L  I  N  Y  T  S  R  T  Y  G  L  W  Y  I  R  N  H  G  G  Y  T  W  L  *  R  V  S  H  W  S  Q  H  Y  W  R  N  D  I  V  P  F  S  I  *   : G  S  N  N  G  T  T  D  N  Y  C  C  D  R  D  *  R  F  V  C  *  I  C  I  G  R  T  E  G  I  S  R  T  N  L  C  L  Q  C  L  N  L  *  R  H  *  E  E  P  P  I  T  F  F  D  G  K  T  S  Q  D  K  V  N  S  F  F  S  Q  S  T  I  V  C  I  L  P  V  F  E  D  F  F  F  L  S  E  K  A  V  Y  S  V  Q  K  I  G  K  L  L  K  L  E  Y  R  I  V  H  C  I  F  F  V  K  P  L  I  F  *  R  E  I  E  L  F  *  H  V  I  F  </first_frame>
            <second_frame>  S  P  S  P  Y  A  E  K  L  L  S  L  K  R  R  V  K  D  R  E  W  A  Q  I  Y  T  E  V  D  V  M  F  R  E  L  L  I  T  R  E  D  L  V  E  K  A  K  G  F  A  L  Q  G  V  N  V  M  Q  R  I  L  V  S  S  T  S  V  L  G  G  S  M  K  V  M  F  L  I  G  N  S  I  V  S  G  A  A  G  L  F  N  F  V  S  Q  L  M  V  F  I  W  V  L  Y  Y  L  I  T  S  D  S  G  G  V  T  E  Q  V  M  S  M  L  P  M  S  H  S  A  R  R  R  S  V  E  V  L  D  K  A  I  S  G  V  L  L  A  T  A  E  I  A  L  F  Q  G  C  L  T  W  L  L  F  R  L  F  S  I  H  F  L  Y  M  S  T  I  L  A  F  L  S  P  L  F  P  I  F  P  S  L  F  S  T  I  P  A  A  L  Q  L  V  L  E  G  Q  Y  V  L  A  I  S  L  S  I  I  H  L  V  L  M  D  Y  G  T  S  E  I  M  E  D  I  P  G  Y  N  A  Y  L  T  G  L  S  I  I  G  G  M  T  L  F  P  S  A  F  E  :  G  A  I  M  G  P  L  I  T  T  V  V  I  A  I  K  D  L  Y  V  E  F  V  L  E  E  Q  K  E  *  A  E  Q  I  C  V  C  N  A  *  T  F  E  D  I  E  K  N  P  L  L  L  S  L  M  E  K  H  R  K  I  K  *  I  L  F  S  P  S  Q  L  L  F  V  F  Y  L  C  L  R  I  F  F  F  S  Q  K  K  L  F  I  V  C  R  K  L  V  N  Y  *  N  W  S  I  E  L  C  I  V  S  S  L  *  N  L  *  S  F  E  E  K  *  N  C  F  D  M  S  F  S </second_frame>
            <third_frame>   P  P  L  L  M  Q  R  N  S  *  A  *  K  G  G  L  K  I  V  N  G  H  K  Y  I  Q  K  W  M  *  C  S  G  N  F  *  S  L  E  R  T  W  L  R  K  P  K  G  S  L  S  K  E  *  M  *  C  N  G  Y  W  L  V  A  H  L  S  *  V  G  A  *  R  S  C  S  *  S  G  I  P  S  F  R  V  L  L  V  F  L  I  L  Y  L  S  *  W  Y  S  F  G  Y  F  I  I  S  S  H  R  I  L  V  E  *  Q  N  K  S  C  L  C  S  L  C  H  I  P  Q  G  G  E  V  L  R  F  L  T  K  L  F  L  G  F  F  *  Q  L  L  R  L  H  S  F  R  G  V  *  L  G  S  C  S  D  Y  S  P  Y  I  F  C  T  C  Q  Q  S  S  H  F  L  V  L  C  F  L  F  S  H  H  C  F  Q  L  S  Q  L  L  Y  S  W  C  L  K  V  N  M  Y  W  P  S  A  Y  Q  L  Y  I  S  Y  L  W  T  M  V  H  P  K  S  W  R  I  Y  L  A  I  T  R  I  S  L  V  S  A  L  L  E  E  *  H  C  S  L  Q  H  L  R :   E  Q  *  W  D  H  *  *  L  L  L  *  S  R  L  K  I  C  M  L  N  L  Y  W  K  N  R  R  N  K  Q  N  K  S  V  F  A  M  P  E  P  L  K  T  L  R  R  T  P  Y  Y  F  L  *  W  K  N  I  A  R  *  S  E  F  F  F  L  P  V  N  Y  C  L  Y  S  T  C  V  *  G  F  F  F  S  L  R  K  S  C  L  *  C  A  E  N  W  *  I  I  K  I  G  V  *  N  C  A  L  Y  L  L  C  K  T  F  N  L  L  K  R  N  R  I  V  L  T  C  H  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13996" stop="14757"/>
                    <exon start="15473" stop="15562"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPSPYAEKLLSLKRRVKDREWAQIYTEVDVMFRELLITREDLVEKAKGFALQGVNVMQRILVSSTSVLGGSMKVMFLIGNSIVSGAAGLFNFVSQLMVFIWVLYYLITSDSGGVTEQVMSMLPMSHSARRRSVEVLDKAISGVLLATAEIALFQGCLTWLLFRLFSIHFLYMSTILAFLSPLFPIFPSLFSTIPAALQLVLEGQYVLAISLSIIHLVLMDYGTSEIMEDIPGYNAYLTGLSIIGGMTLFPSAFEGAIMGPLITTVVIAIKDLYVEFVLEEQKE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15610" stop="15828"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEPPITFFDGKTSQDKVNSFFSQSTIVCILPVFEDFFFLSEKAVYSVQKIGKLLKLEYRIVHCIFFVKPLIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="15865" PGL_stop="15526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15865" e_stop="15526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="15865" e_stop="15526" e_length="340"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15865" stop="15526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323264" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGGAAAATGACATGTCAAAACAATTCTATTTCTCTTCAAAAGATTAAAGGTTTTACAAAGAAGATACAATGCACAATTCTATACTCCAATTTTAATAATTTACCAATTTTCTGCACACTATAAACAGCTTTTTCTGAGAGAAAAAAAAAATCCTCAAACACAGGTAGAATACAAACAATAGTTGACTGGGAGAAAAAAGAATTCACTTTATCTTGCGATGTTTTTCCATCAAAGAAAGTAATAGGGGGTTCTTCTCAATGTCTTCAAAGGTTCAGGCATTGCAAACACAGATTTGTTCTGCTTATTCCTTCTGTTCTTCCAATACAAATTCAACATAC</gDNA_template>
            <first_frame> E  G  K  *  H  V  K  T  I  L  F  L  F  K  R  L  K  V  L  Q  R  R  Y  N  A  Q  F  Y  T  P  I  L  I  I  Y  Q  F  S  A  H  Y  K  Q  L  F  L  R  E  K  K  N  P  Q  T  Q  V  E  Y  K  Q  *  L  T  G  R  K  K  N  S  L  Y  L  A  M  F  F  H  Q  R  K  *  *  G  V  L  L  N  V  F  K  G  S  G  I  A  N  T  D  L  F  C  L  F  L  L  F  F  Q  Y  K  F  N  I  </first_frame>
            <second_frame>  K  E  N  D  M  S  K  Q  F  Y  F  S  S  K  D  *  R  F  Y  K  E  D  T  M  H  N  S  I  L  Q  F  *  *  F  T  N  F  L  H  T  I  N  S  F  F  *  E  K  K  K  I  L  K  H  R  *  N  T  N  N  S  *  L  G  E  K  R  I  H  F  I  L  R  C  F  S  I  K  E  S  N  R  G  F  F  S  M  S  S  K  V  Q  A  L  Q  T  Q  I  C  S  A  Y  S  F  C  S  S  N  T  N  S  T  Y </second_frame>
            <third_frame>   R  K  M  T  C  Q  N  N  S  I  S  L  Q  K  I  K  G  F  T  K  K  I  Q  C  T  I  L  Y  S  N  F  N  N  L  P  I  F  C  T  L  *  T  A  F  S  E  R  K  K  K  S  S  N  T  G  R  I  Q  T  I  V  D  W  E  K  K  E  F  T  L  S  C  D  V  F  P  S  K  K  V  I  G  G  S  S  Q  C  L  Q  R  F  R  H  C  K  H  R  F  V  L  L  I  P  S  V  L  P  I  Q  I  Q  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15740" stop="15528"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAFSERKKKSSNTGRIQTIVDWEKKEFTLSCDVFPSKKVIGGSSQCLQRFRHCKHRFVLLIPSVLPIQIQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="19303" PGL_stop="16216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19303" e_stop="19173"/>
            <exon e_start="19007" e_stop="18866"/>
            <exon e_start="17756" e_stop="17653"/>
            <exon e_start="17542" e_stop="17501"/>
            <exon e_start="17414" e_stop="17330"/>
            <exon e_start="17063" e_stop="16964"/>
            <exon e_start="16707" e_stop="16607"/>
            <exon e_start="16512" e_stop="16216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.808" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.498" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19303" e_stop="19173" e_length="131"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.808">
            <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19007" e_stop="18866" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.896" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17756" e_stop="17653" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.498" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17542" e_stop="17501" e_length="42"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.991">
            <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17414" e_stop="17330" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17063" e_stop="16964" e_length="100"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16707" e_stop="16607" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.806" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="16512" e_stop="16216" e_length="297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19303" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19303" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731706" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19293" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19291" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19283" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19259" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18897" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17729" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16999" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16694" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16685" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGGCACTTATTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG : AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG : AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG : AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG : GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG : TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA : GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG : GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCATCT</gDNA_template>
            <first_frame> T  A  L  I  I  Y  P  A  V  H  R  P  Q  T  I  R  C  E  L  G  Q  T  K  I  R  I  S  Q  L  H  H  L  F  D  S  A  G  D  F  N  H  S  L  R :   I  L  K  Y  D  N  C  S  *  T  Y  M  G  T  S  *  R  R  E  *  T  R  W  N  *  N  F  W  S  I  S  E  V  F  F  K  R  Y  C  S  S  H  Y  F  K  A  *  :  K  G  G  T  G  Y  S  G  *  V  A  *  E  K  S  P  G  R  V  G  G  P  *  A  K  T  F  F  F  K  R  Q  R  L  R :   G  Q  R  S  *  K  E  W  S  T  A  F  R  W :   C  *  K  S  D  *  R  P  H  C  S  T  Q  R  *  C  *  *  *  C  R  H  Q  K  *  R  *  E  :  *  G  *  *  R  R  *  *  *  R  *  Y  R  G  S  I  G  R  A  *  T  D  K  K  G  E  S  R  G  E  T  S  K   : R  T  T  R  A  R  G  G  A  *  S  K  G  S  R  I  V  E  R  K  P  S  Y  K  P  A  N  V  F  Q  C  *  E  K  :  V  G  *  *  C  G  L  Q  E  S  G  S  R  R  T  E  G  S  Q  A  F  H  *  *  H  H  P  E  *  L  S  Q  E  V  S  P  Q  I  H  E  M  I  I  G  F  *  C  E  K  K  A  I  N  K  H  Q  C  L  V  N  C  F  C  C  S  C  F  S  T  P  C  H  I  I  Q  A  L  L  *  Y  C  H  S  *  T  I  Y  G  N  T  F  L  F  F  I  M  F  S  S </first_frame>
            <second_frame>  R  H  L  L  F  I  R  R  C  I  V  P  K  Q  S  G  V  N  W  V  K  P  K  S  E  S  P  S  S  I  I  S  S  I  P  P  A  I  S  I  T  P  *   : E  F  *  S  M  T  T  A  A  R  P  T  W  A  P  A  K  G  G  N  E  Q  G  G  T  R  I  F  G  P  S  Q  K  Y  S  S  R  D  I  A  A  H  T  T  L  K  P  R :   K  E  G  Q  D  T  Q  D  E  L  H  R  R  N  L  R  E  E  L  E  D  R  E  R  R  H  F  S  S  K  D  N  G  Y   : E  D  R  D  R  R  K  S  G  Q  L  L  L  D   : G  A  K  R  V  I  E  D  R  I  V  P  R  S  A  D  A  D  D  D  A  D  T  K  S  D  D  E  S :   E  D  D  D  D  D  D  D  E  D  D  T  E  A  L  L  A  E  L  E  Q  I  K  K  E  K  A  E  E  K  L  R  K  :  E  R  Q  E  Q  E  E  E  L  K  A  K  E  A  E  L  L  K  G  N  P  L  I  N  Q  P  T  S  F  S  V  K  R  R :   W  D  D  D  V  V  F  K  N  Q  A  R  G  E  L  K  V  A  K  R  F  I  N  D  T  I  R  N  D  F  H  R  K  F  L  H  K  Y  M  K  *  *  *  D  F  D  V  K  K  K  Q  S  T  N  I  N  A  L  *  I  V  F  V  V  V  V  S  Q  H  P  V  I  S  F  K  H  Y  C  N  I  V  I  P  K  L  Y  M  E  I  H  F  C  S  L  L  C  S  H   </second_frame>
            <third_frame>   G  T  Y  Y  L  S  G  G  A  S  S  P  N  N  P  V  *  I  G  S  N  Q  N  P  N  L  P  A  P  S  S  L  R  F  R  R  R  F  Q  S  L  L  K  :  N  F  E  V  *  Q  L  Q  L  D  L  H  G  H  Q  L  K  E  G  M  N  K  V  E  L  E  F  L  V  H  L  R  S  I  L  Q  E  I  L  Q  L  T  L  L  *  S  L   : E  R  R  D  R  I  L  R  M  S  C  I  G  E  I  S  G  K  S  W  R  T  V  S  E  D  I  F  L  Q  K  T  T  A  T  :  R  T  E  I  V  E  R  V  V  N  C  F  *  M  :  V  L  K  E  *  L  K  T  A  L  F  H  A  A  L  M  L  M  M  M  Q  T  P  K  V  T  M  R   : V  R  M  M  T  T  M  M  M  K  M  I  Q  R  L  Y  W  Q  S  L  N  R  *  K  R  R  K  Q  R  R  N  F  E  K :   N  D  K  S  K  R  R  S  L  K  Q  R  K  Q  N  C  *  K  E  T  L  L  *  T  S  Q  R  L  S  V  L  R  E   : G  G  M  M  M  W  S  S  R  I  R  L  A  E  N  *  R  *  P  S  V  S  L  M  T  P  S  G  M  T  F  T  G  S  F  S  T  N  T  *  N  D  N  R  I  L  M  *  K  K  S  N  Q  Q  T  S  M  P  C  E  L  F  L  L  *  L  F  L  N  T  L  S  Y  H  S  S  I  T  V  I  L  S  F  L  N  Y  I  W  K  Y  I  S  V  L  Y  Y  V  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18999" stop="18866"/>
                    <exon start="17756" stop="17653"/>
                    <exon start="17542" stop="17501"/>
                    <exon start="17414" stop="17330"/>
                    <exon start="17063" stop="16964"/>
                    <exon start="16707" stop="16607"/>
                    <exon start="16512" stop="16389"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTQDELHRRNLREELEDRERRHFSSKDNGYEDRDRRKSGQLLLDGAKRVIEDRIVPRSADADDDADTKSDDESEDDDDDDDEDDTEALLAELEQIKKEKAEEKLRKERQEQEEELKAKEAELLKGNPLINQPTSFSVKRRWDDDVVFKNQARGELKVAKRFINDTIRNDFHRKFLHKYMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19245" e_stop="19173"/>
            <exon e_start="19023" e_stop="18866"/>
            <exon e_start="17756" e_stop="17653"/>
            <exon e_start="17542" e_stop="17501"/>
            <exon e_start="17414" e_stop="17330"/>
            <exon e_start="17063" e_stop="16964"/>
            <exon e_start="16707" e_stop="16607"/>
            <exon e_start="16512" e_stop="16216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.890"/>
          <exon-intron don_prob="0.896" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.498" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.890">
            <gDNA_exon_boundary e_start="19245" e_stop="19173" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19172" i_stop="19024" i_length="149"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19023" e_stop="18866" e_length="158"/>
          </exon>
          <intron i_serial="2" don_prob="0.896" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17756" e_stop="17653" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.498" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17542" e_stop="17501" e_length="42"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.991">
            <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17414" e_stop="17330" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17063" e_stop="16964" e_length="100"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16707" e_stop="16607" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.806" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="16512" e_stop="16216" e_length="297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19245" stop="19173"/>
              <exon start="19023" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19245" stop="19173"/>
              <exon start="19023" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19245" stop="19173"/>
              <exon start="19023" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18897" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17729" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16999" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16694" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16685" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG : ACTTTTTTTCACACAGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG : AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG : AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG : GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG : TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA : GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG : GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCATCT</gDNA_template>
            <first_frame> V  K  P  K  S  E  S  P  S  S  I  I  S  S  I  P  P  A  I  S  I  T  P  *   : D  F  F  S  H  R  I  L  K  Y  D  N  C  S  *  T  Y  M  G  T  S  *  R  R  E  *  T  R  W  N  *  N  F  W  S  I  S  E  V  F  F  K  R  Y  C  S  S  H  Y  F  K  A  *  :  K  G  G  T  G  Y  S  G  *  V  A  *  E  K  S  P  G  R  V  G  G  P  *  A  K  T  F  F  F  K  R  Q  R  L  R :   G  Q  R  S  *  K  E  W  S  T  A  F  R  W :   C  *  K  S  D  *  R  P  H  C  S  T  Q  R  *  C  *  *  *  C  R  H  Q  K  *  R  *  E  :  *  G  *  *  R  R  *  *  *  R  *  Y  R  G  S  I  G  R  A  *  T  D  K  K  G  E  S  R  G  E  T  S  K   : R  T  T  R  A  R  G  G  A  *  S  K  G  S  R  I  V  E  R  K  P  S  Y  K  P  A  N  V  F  Q  C  *  E  K  :  V  G  *  *  C  G  L  Q  E  S  G  S  R  R  T  E  G  S  Q  A  F  H  *  *  H  H  P  E  *  L  S  Q  E  V  S  P  Q  I  H  E  M  I  I  G  F  *  C  E  K  K  A  I  N  K  H  Q  C  L  V  N  C  F  C  C  S  C  F  S  T  P  C  H  I  I  Q  A  L  L  *  Y  C  H  S  *  T  I  Y  G  N  T  F  L  F  F  I  M  F  S  S </first_frame>
            <second_frame>  S  N  Q  N  P  N  L  P  A  P  S  S  L  R  F  R  R  R  F  Q  S  L  L  K  :  T  F  F  H  T  E  F  *  S  M  T  T  A  A  R  P  T  W  A  P  A  K  G  G  N  E  Q  G  G  T  R  I  F  G  P  S  Q  K  Y  S  S  R  D  I  A  A  H  T  T  L  K  P  R :   K  E  G  Q  D  T  Q  D  E  L  H  R  R  N  L  R  E  E  L  E  D  R  E  R  R  H  F  S  S  K  D  N  G  Y   : E  D  R  D  R  R  K  S  G  Q  L  L  L  D   : G  A  K  R  V  I  E  D  R  I  V  P  R  S  A  D  A  D  D  D  A  D  T  K  S  D  D  E  S :   E  D  D  D  D  D  D  D  E  D  D  T  E  A  L  L  A  E  L  E  Q  I  K  K  E  K  A  E  E  K  L  R  K  :  E  R  Q  E  Q  E  E  E  L  K  A  K  E  A  E  L  L  K  G  N  P  L  I  N  Q  P  T  S  F  S  V  K  R  R :   W  D  D  D  V  V  F  K  N  Q  A  R  G  E  L  K  V  A  K  R  F  I  N  D  T  I  R  N  D  F  H  R  K  F  L  H  K  Y  M  K  *  *  *  D  F  D  V  K  K  K  Q  S  T  N  I  N  A  L  *  I  V  F  V  V  V  V  S  Q  H  P  V  I  S  F  K  H  Y  C  N  I  V  I  P  K  L  Y  M  E  I  H  F  C  S  L  L  C  S  H   </second_frame>
            <third_frame>   Q  T  K  I  R  I  S  Q  L  H  H  L  F  D  S  A  G  D  F  N  H  S  L  R :   L  F  F  T  Q  N  F  E  V  *  Q  L  Q  L  D  L  H  G  H  Q  L  K  E  G  M  N  K  V  E  L  E  F  L  V  H  L  R  S  I  L  Q  E  I  L  Q  L  T  L  L  *  S  L   : E  R  R  D  R  I  L  R  M  S  C  I  G  E  I  S  G  K  S  W  R  T  V  S  E  D  I  F  L  Q  K  T  T  A  T  :  R  T  E  I  V  E  R  V  V  N  C  F  *  M  :  V  L  K  E  *  L  K  T  A  L  F  H  A  A  L  M  L  M  M  M  Q  T  P  K  V  T  M  R   : V  R  M  M  T  T  M  M  M  K  M  I  Q  R  L  Y  W  Q  S  L  N  R  *  K  R  R  K  Q  R  R  N  F  E  K :   N  D  K  S  K  R  R  S  L  K  Q  R  K  Q  N  C  *  K  E  T  L  L  *  T  S  Q  R  L  S  V  L  R  E   : G  G  M  M  M  W  S  S  R  I  R  L  A  E  N  *  R  *  P  S  V  S  L  M  T  P  S  G  M  T  F  T  G  S  F  S  T  N  T  *  N  D  N  R  I  L  M  *  K  K  S  N  Q  Q  T  S  M  P  C  E  L  F  L  L  *  L  F  L  N  T  L  S  Y  H  S  S  I  T  V  I  L  S  F  L  N  Y  I  W  K  Y  I  S  V  L  Y  Y  V  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18999" stop="18866"/>
                    <exon start="17756" stop="17653"/>
                    <exon start="17542" stop="17501"/>
                    <exon start="17414" stop="17330"/>
                    <exon start="17063" stop="16964"/>
                    <exon start="16707" stop="16607"/>
                    <exon start="16512" stop="16389"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTQDELHRRNLREELEDRERRHFSSKDNGYEDRDRRKSGQLLLDGAKRVIEDRIVPRSADADDDADTKSDDESEDDDDDDDEDDTEALLAELEQIKKEKAEEKLRKERQEQEEELKAKEAELLKGNPLINQPTSFSVKRRWDDDVVFKNQARGELKVAKRFINDTIRNDFHRKFLHKYMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="19250" e_stop="19173"/>
            <exon e_start="19007" e_stop="18866"/>
            <exon e_start="17756" e_stop="17653"/>
            <exon e_start="17557" e_stop="17501"/>
            <exon e_start="17414" e_stop="17330"/>
            <exon e_start="17063" e_stop="16964"/>
            <exon e_start="16707" e_stop="16607"/>
            <exon e_start="16512" e_stop="16218"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.808" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.498" acc_prob="0.881" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19250" e_stop="19173" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.808">
            <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19007" e_stop="18866" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.896" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17756" e_stop="17653" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.498" acc_prob="0.881">
            <gDNA_intron_boundary i_start="17652" i_stop="17558" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17557" e_stop="17501" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.991">
            <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17414" e_stop="17330" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17063" e_stop="16964" e_length="100"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16707" e_stop="16607" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.806" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="16512" e_stop="16218" e_length="295"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19250" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17557" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19249" stop="19173"/>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17557" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17547" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16999" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16694" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16685" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG : AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG : AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG : TATATGTTGTTGCAGAGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG : GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG : TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA : GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG : GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCAT</gDNA_template>
            <first_frame> I  G  S  N  Q  N  P  N  L  P  A  P  S  S  L  R  F  R  R  R  F  Q  S  L  L  K  :  N  F  E  V  *  Q  L  Q  L  D  L  H  G  H  Q  L  K  E  G  M  N  K  V  E  L  E  F  L  V  H  L  R  S  I  L  Q  E  I  L  Q  L  T  L  L  *  S  L   : E  R  R  D  R  I  L  R  M  S  C  I  G  E  I  S  G  K  S  W  R  T  V  S  E  D  I  F  L  Q  K  T  T  A  T  :  Y  M  L  L  Q  R  T  E  I  V  E  R  V  V  N  C  F  *  M  :  V  L  K  E  *  L  K  T  A  L  F  H  A  A  L  M  L  M  M  M  Q  T  P  K  V  T  M  R   : V  R  M  M  T  T  M  M  M  K  M  I  Q  R  L  Y  W  Q  S  L  N  R  *  K  R  R  K  Q  R  R  N  F  E  K :   N  D  K  S  K  R  R  S  L  K  Q  R  K  Q  N  C  *  K  E  T  L  L  *  T  S  Q  R  L  S  V  L  R  E   : G  G  M  M  M  W  S  S  R  I  R  L  A  E  N  *  R  *  P  S  V  S  L  M  T  P  S  G  M  T  F  T  G  S  F  S  T  N  T  *  N  D  N  R  I  L  M  *  K  K  S  N  Q  Q  T  S  M  P  C  E  L  F  L  L  *  L  F  L  N  T  L  S  Y  H  S  S  I  T  V  I  L  S  F  L  N  Y  I  W  K  Y  I  S  V  L  Y  Y  V  L   </first_frame>
            <second_frame>  L  G  Q  T  K  I  R  I  S  Q  L  H  H  L  F  D  S  A  G  D  F  N  H  S  L  R :   I  L  K  Y  D  N  C  S  *  T  Y  M  G  T  S  *  R  R  E  *  T  R  W  N  *  N  F  W  S  I  S  E  V  F  F  K  R  Y  C  S  S  H  Y  F  K  A  *  :  K  G  G  T  G  Y  S  G  *  V  A  *  E  K  S  P  G  R  V  G  G  P  *  A  K  T  F  F  F  K  R  Q  R  L  R :   I  C  C  C  R  G  Q  R  S  *  K  E  W  S  T  A  F  R  W :   C  *  K  S  D  *  R  P  H  C  S  T  Q  R  *  C  *  *  *  C  R  H  Q  K  *  R  *  E  :  *  G  *  *  R  R  *  *  *  R  *  Y  R  G  S  I  G  R  A  *  T  D  K  K  G  E  S  R  G  E  T  S  K   : R  T  T  R  A  R  G  G  A  *  S  K  G  S  R  I  V  E  R  K  P  S  Y  K  P  A  N  V  F  Q  C  *  E  K  :  V  G  *  *  C  G  L  Q  E  S  G  S  R  R  T  E  G  S  Q  A  F  H  *  *  H  H  P  E  *  L  S  Q  E  V  S  P  Q  I  H  E  M  I  I  G  F  *  C  E  K  K  A  I  N  K  H  Q  C  L  V  N  C  F  C  C  S  C  F  S  T  P  C  H  I  I  Q  A  L  L  *  Y  C  H  S  *  T  I  Y  G  N  T  F  L  F  F  I  M  F  S  </second_frame>
            <third_frame>   W  V  K  P  K  S  E  S  P  S  S  I  I  S  S  I  P  P  A  I  S  I  T  P  *   : E  F  *  S  M  T  T  A  A  R  P  T  W  A  P  A  K  G  G  N  E  Q  G  G  T  R  I  F  G  P  S  Q  K  Y  S  S  R  D  I  A  A  H  T  T  L  K  P  R :   K  E  G  Q  D  T  Q  D  E  L  H  R  R  N  L  R  E  E  L  E  D  R  E  R  R  H  F  S  S  K  D  N  G  Y   : V  Y  V  V  A  E  D  R  D  R  R  K  S  G  Q  L  L  L  D   : G  A  K  R  V  I  E  D  R  I  V  P  R  S  A  D  A  D  D  D  A  D  T  K  S  D  D  E  S :   E  D  D  D  D  D  D  D  E  D  D  T  E  A  L  L  A  E  L  E  Q  I  K  K  E  K  A  E  E  K  L  R  K  :  E  R  Q  E  Q  E  E  E  L  K  A  K  E  A  E  L  L  K  G  N  P  L  I  N  Q  P  T  S  F  S  V  K  R  R :   W  D  D  D  V  V  F  K  N  Q  A  R  G  E  L  K  V  A  K  R  F  I  N  D  T  I  R  N  D  F  H  R  K  F  L  H  K  Y  M  K  *  *  *  D  F  D  V  K  K  K  Q  S  T  N  I  N  A  L  *  I  V  F  V  V  V  V  S  Q  H  P  V  I  S  F  K  H  Y  C  N  I  V  I  P  K  L  Y  M  E  I  H  F  C  S  L  L  C  S  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18999" stop="18866"/>
                    <exon start="17756" stop="17653"/>
                    <exon start="17557" stop="17501"/>
                    <exon start="17414" stop="17330"/>
                    <exon start="17063" stop="16964"/>
                    <exon start="16707" stop="16607"/>
                    <exon start="16512" stop="16389"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>702</number_coding_nucleotides>
                  <number_encoded_amino_acids>234</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTQDELHRRNLREELEDRERRHFSSKDNGYVYVVAEDRDRRKSGQLLLDGAKRVIEDRIVPRSADADDDADTKSDDESEDDDDDDDEDDTEALLAELEQIKKEKAEEKLRKERQEQEEELKAKEAELLKGNPLINQPTSFSVKRRWDDDVVFKNQARGELKVAKRFINDTIRNDFHRKFLHKYMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="19273" e_stop="19173"/>
            <exon e_start="19009" e_stop="18866"/>
            <exon e_start="17756" e_stop="17653"/>
            <exon e_start="17542" e_stop="17501"/>
            <exon e_start="17414" e_stop="17330"/>
            <exon e_start="17063" e_stop="16964"/>
            <exon e_start="16707" e_stop="16607"/>
            <exon e_start="16512" e_stop="16216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.911"/>
          <exon-intron don_prob="0.896" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.498" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="19273" e_stop="19173" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19172" i_stop="19010" i_length="163"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19009" e_stop="18866" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.896" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18865" i_stop="17757" i_length="1109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17756" e_stop="17653" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.498" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17652" i_stop="17543" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17542" e_stop="17501" e_length="42"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.991">
            <gDNA_intron_boundary i_start="17500" i_stop="17415" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17414" e_stop="17330" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="17329" i_stop="17064" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17063" e_stop="16964" e_length="100"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="16963" i_stop="16708" i_length="256"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16707" e_stop="16607" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.806" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16606" i_stop="16513" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="16512" e_stop="16216" e_length="297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19273" stop="19173"/>
              <exon start="19009" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19007" stop="18866"/>
              <exon start="17756" stop="17678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18897" stop="18866"/>
              <exon start="17756" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17729" stop="17653"/>
              <exon start="17542" stop="17501"/>
              <exon start="17414" stop="17330"/>
              <exon start="17063" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17059" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16999" stop="16964"/>
              <exon start="16707" stop="16607"/>
              <exon start="16512" stop="16219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16694" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16685" stop="16607"/>
              <exon start="16512" stop="16231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG : AGAATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAG : AAAGGAGGGACAGGATACTCAGGATGAGTTGCATAGGAGAAATCTCCGGGAAGAGTTGGAGGACCGTGAGCGAAGACATTTTTCTTCAAAAGACAACGGCTACG : AGGACAGAGATCGTAGAAAGAGTGGTCAACTGCTTTTAGATG : GTGCTAAAAGAGTGATTGAAGACCGCATTGTTCCACGCAGCGCTGATGCTGATGATGATGCAGACACCAAAAGTGACGATGAGAG : TGAGGATGATGACGACGATGATGATGAAGATGATACAGAGGCTCTATTGGCAGAGCTTGAACAGATAAAAAAGGAGAAAGCAGAGGAGAAACTTCGAAAA : GAACGACAAGAGCAAGAGGAGGAGCTTAAAGCAAAGGAAGCAGAATTGTTGAAAGGAAACCCTCTTATAAACCAGCCAACGTCTTTCAGTGTTAAGAGAAG : GTGGGATGATGATGTGGTCTTCAAGAATCAGGCTCGCGGAGAACTGAAGGTAGCCAAGCGTTTCATTAATGACACCATCCGGAATGACTTTCACAGGAAGTTTCTCCACAAATACATGAAATGATAATAGGATTTTGATGTGAAAAAAAAGCAATCAACAAACATCAATGCCTTGTGAATTGTTTTTGTTGTAGTTGTTTCTCAACACCCTGTCATATCATTCAAGCATTACTGTAATATTGTCATTCCTAAACTATATATGGAAATACATTTCTGTTCTTTATTATGTTCTCATCT</gDNA_template>
            <first_frame> R  P  Q  T  I  R  C  E  L  G  Q  T  K  I  R  I  S  Q  L  H  H  L  F  D  S  A  G  D  F  N  H  S  L  R :   E  F  *  S  M  T  T  A  A  R  P  T  W  A  P  A  K  G  G  N  E  Q  G  G  T  R  I  F  G  P  S  Q  K  Y  S  S  R  D  I  A  A  H  T  T  L  K  P  R :   K  E  G  Q  D  T  Q  D  E  L  H  R  R  N  L  R  E  E  L  E  D  R  E  R  R  H  F  S  S  K  D  N  G  Y   : E  D  R  D  R  R  K  S  G  Q  L  L  L  D   : G  A  K  R  V  I  E  D  R  I  V  P  R  S  A  D  A  D  D  D  A  D  T  K  S  D  D  E  S :   E  D  D  D  D  D  D  D  E  D  D  T  E  A  L  L  A  E  L  E  Q  I  K  K  E  K  A  E  E  K  L  R  K  :  E  R  Q  E  Q  E  E  E  L  K  A  K  E  A  E  L  L  K  G  N  P  L  I  N  Q  P  T  S  F  S  V  K  R  R :   W  D  D  D  V  V  F  K  N  Q  A  R  G  E  L  K  V  A  K  R  F  I  N  D  T  I  R  N  D  F  H  R  K  F  L  H  K  Y  M  K  *  *  *  D  F  D  V  K  K  K  Q  S  T  N  I  N  A  L  *  I  V  F  V  V  V  V  S  Q  H  P  V  I  S  F  K  H  Y  C  N  I  V  I  P  K  L  Y  M  E  I  H  F  C  S  L  L  C  S  H   </first_frame>
            <second_frame>  V  P  K  Q  S  G  V  N  W  V  K  P  K  S  E  S  P  S  S  I  I  S  S  I  P  P  A  I  S  I  T  P  *   : E  N  F  E  V  *  Q  L  Q  L  D  L  H  G  H  Q  L  K  E  G  M  N  K  V  E  L  E  F  L  V  H  L  R  S  I  L  Q  E  I  L  Q  L  T  L  L  *  S  L   : E  R  R  D  R  I  L  R  M  S  C  I  G  E  I  S  G  K  S  W  R  T  V  S  E  D  I  F  L  Q  K  T  T  A  T  :  R  T  E  I  V  E  R  V  V  N  C  F  *  M  :  V  L  K  E  *  L  K  T  A  L  F  H  A  A  L  M  L  M  M  M  Q  T  P  K  V  T  M  R   : V  R  M  M  T  T  M  M  M  K  M  I  Q  R  L  Y  W  Q  S  L  N  R  *  K  R  R  K  Q  R  R  N  F  E  K :   N  D  K  S  K  R  R  S  L  K  Q  R  K  Q  N  C  *  K  E  T  L  L  *  T  S  Q  R  L  S  V  L  R  E   : G  G  M  M  M  W  S  S  R  I  R  L  A  E  N  *  R  *  P  S  V  S  L  M  T  P  S  G  M  T  F  T  G  S  F  S  T  N  T  *  N  D  N  R  I  L  M  *  K  K  S  N  Q  Q  T  S  M  P  C  E  L  F  L  L  *  L  F  L  N  T  L  S  Y  H  S  S  I  T  V  I  L  S  F  L  N  Y  I  W  K  Y  I  S  V  L  Y  Y  V  L  I  </second_frame>
            <third_frame>   S  P  N  N  P  V  *  I  G  S  N  Q  N  P  N  L  P  A  P  S  S  L  R  F  R  R  R  F  Q  S  L  L  K  :  R  I  L  K  Y  D  N  C  S  *  T  Y  M  G  T  S  *  R  R  E  *  T  R  W  N  *  N  F  W  S  I  S  E  V  F  F  K  R  Y  C  S  S  H  Y  F  K  A  *  :  K  G  G  T  G  Y  S  G  *  V  A  *  E  K  S  P  G  R  V  G  G  P  *  A  K  T  F  F  F  K  R  Q  R  L  R :   G  Q  R  S  *  K  E  W  S  T  A  F  R  W :   C  *  K  S  D  *  R  P  H  C  S  T  Q  R  *  C  *  *  *  C  R  H  Q  K  *  R  *  E  :  *  G  *  *  R  R  *  *  *  R  *  Y  R  G  S  I  G  R  A  *  T  D  K  K  G  E  S  R  G  E  T  S  K   : R  T  T  R  A  R  G  G  A  *  S  K  G  S  R  I  V  E  R  K  P  S  Y  K  P  A  N  V  F  Q  C  *  E  K  :  V  G  *  *  C  G  L  Q  E  S  G  S  R  R  T  E  G  S  Q  A  F  H  *  *  H  H  P  E  *  L  S  Q  E  V  S  P  Q  I  H  E  M  I  I  G  F  *  C  E  K  K  A  I  N  K  H  Q  C  L  V  N  C  F  C  C  S  C  F  S  T  P  C  H  I  I  Q  A  L  L  *  Y  C  H  S  *  T  I  Y  G  N  T  F  L  F  F  I  M  F  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18999" stop="18866"/>
                    <exon start="17756" stop="17653"/>
                    <exon start="17542" stop="17501"/>
                    <exon start="17414" stop="17330"/>
                    <exon start="17063" stop="16964"/>
                    <exon start="16707" stop="16607"/>
                    <exon start="16512" stop="16389"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTQDELHRRNLREELEDRERRHFSSKDNGYEDRDRRKSGQLLLDGAKRVIEDRIVPRSADADDDADTKSDDESEDDDDDDDEDDTEALLAELEQIKKEKAEEKLRKERQEQEEELKAKEAELLKGNPLINQPTSFSVKRRWDDDVVFKNQARGELKVAKRFINDTIRNDFHRKFLHKYMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="19293" e_stop="19173"/>
            <exon e_start="19007" e_stop="18726"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.808" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19293" e_stop="19173" e_length="121"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.808">
            <gDNA_intron_boundary i_start="19172" i_stop="19008" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="19007" e_stop="18726" e_length="282"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19293" stop="19173"/>
              <exon start="19007" stop="18726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264507" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTATCCGGCGGTGCATCGTCCCCAAACAATCCGGTGTGAATTGGGTCAAACCAAAATCCGAATCTCCCAGCTCCATCATCTCTTCGATTCCGCCGGCGATTTCAATCACTCCTTAAG : AATTTTGAAGTATGACAACTGCAGCTAGACCTACATGGGCACCAGCTAAAGGAGGGAATGAACAAGGTGGAACTAGAATTTTTGGTCCATCTCAGAAGTATTCTTCAAGAGATATTGCAGCTCACACTACTTTAAAGCCTAGGCAAGTAATTTGAAATAATGTTTTTTTTTTATTACTACTTCCGTTTCAATCTGTTTGTGTGGTTTTTGACTTACCACGGAGTGTACTGAGTCTAAAGCTGGGATTTTTGTGGCTCAACTTACCTGGTTCCAACCTGCATC</gDNA_template>
            <first_frame> L  F  I  R  R  C  I  V  P  K  Q  S  G  V  N  W  V  K  P  K  S  E  S  P  S  S  I  I  S  S  I  P  P  A  I  S  I  T  P  *   : E  F  *  S  M  T  T  A  A  R  P  T  W  A  P  A  K  G  G  N  E  Q  G  G  T  R  I  F  G  P  S  Q  K  Y  S  S  R  D  I  A  A  H  T  T  L  K  P  R  Q  V  I  *  N  N  V  F  F  L  L  L  L  P  F  Q  S  V  C  V  V  F  D  L  P  R  S  V  L  S  L  K  L  G  F  L  W  L  N  L  P  G  S  N  L  H  </first_frame>
            <second_frame>  Y  L  S  G  G  A  S  S  P  N  N  P  V  *  I  G  S  N  Q  N  P  N  L  P  A  P  S  S  L  R  F  R  R  R  F  Q  S  L  L  K  :  N  F  E  V  *  Q  L  Q  L  D  L  H  G  H  Q  L  K  E  G  M  N  K  V  E  L  E  F  L  V  H  L  R  S  I  L  Q  E  I  L  Q  L  T  L  L  *  S  L  G  K  *  F  E  I  M  F  F  F  Y  Y  Y  F  R  F  N  L  F  V  W  F  L  T  Y  H  G  V  Y  *  V  *  S  W  D  F  C  G  S  T  Y  L  V  P  T  C  I </second_frame>
            <third_frame>   I  Y  P  A  V  H  R  P  Q  T  I  R  C  E  L  G  Q  T  K  I  R  I  S  Q  L  H  H  L  F  D  S  A  G  D  F  N  H  S  L  R :   I  L  K  Y  D  N  C  S  *  T  Y  M  G  T  S  *  R  R  E  *  T  R  W  N  *  N  F  W  S  I  S  E  V  F  F  K  R  Y  C  S  S  H  Y  F  K  A  *  A  S  N  L  K  *  C  F  F  F  I  T  T  S  V  S  I  C  L  C  G  F  *  L  T  T  E  C  T  E  S  K  A  G  I  F  V  A  Q  L  T  W  F  Q  P  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0119A22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="24994" PGL_stop="30343"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24994" e_stop="25106"/>
            <exon e_start="26074" e_stop="26155"/>
            <exon e_start="26258" e_stop="26391"/>
            <exon e_start="27046" e_stop="27128"/>
            <exon e_start="27300" e_stop="27359"/>
            <exon e_start="28680" e_stop="28788"/>
            <exon e_start="28874" e_stop="28926"/>
            <exon e_start="29600" e_stop="29680"/>
            <exon e_start="29926" e_stop="30038"/>
            <exon e_start="30120" e_stop="30343"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.877" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24994" e_stop="25106" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.952">
            <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26074" e_stop="26155" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.996">
            <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26258" e_stop="26391" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.894" acc_prob="0.994">
            <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27046" e_stop="27128" e_length="83"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27300" e_stop="27359" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28680" e_stop="28788" e_length="109"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.877">
            <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28874" e_stop="28926" e_length="53"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.979">
            <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="29600" e_stop="29680" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29681" i_stop="29925" i_length="245"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="29926" e_stop="30038" e_length="113"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.978">
            <gDNA_intron_boundary i_start="30039" i_stop="30119" i_length="81"/>
          </intron>
          <exon e_serial="10" e_score="0.991">
            <gDNA_exon_boundary e_start="30120" e_stop="30343" e_length="224"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24994" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379953" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24994" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205685" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25019" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E360240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25028" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25028" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25051" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29680"/>
              <exon start="29926" stop="30038"/>
              <exon start="30120" stop="30226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25078" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25084" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26374" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29680"/>
              <exon start="29926" stop="30038"/>
              <exon start="30120" stop="30343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26374" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29680"/>
              <exon start="29926" stop="30038"/>
              <exon start="30120" stop="30321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350737" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC : ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG : ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT : TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG : GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG : GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT : TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG : GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAG : ACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAA : GGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTCTTATTATTCTTTTTTGAATAGTTGTTTTGTGATTTATTTCTATGAATTGATTGATGTGGAGTTTCTATTGACTGATTAGAACCAAACAAAACCC</gDNA_template>
            <first_frame> K  N  Q  K  E  I  N  K  V  K  E  S  F  L  L  L  L  P  Q  K  F  I  S  D  F  A  I  I  S  N  *  I  S  I  Y  S  *  T :   Y  I  A  A  Y  R  *  V  S  E  T  F  S  I  L  D  S  *  I  D  I  T  E  N  G  R  K  :  I  W  S  V  L  N  L  R  R  Y  H  A  A  V  L  R  F  L  P  F  E  V  L  R  S  *  F  *  A  I  G  G  P  R  R  S  *  D  T  C  T  R  D  S  F :   *  R  Q  R  D  *  S  S  L  *  A  L  *  E  D  K  Q  C  S  D  *  *  W  F  N  Q  Q   : G  R  V  S  I  G  T  F  Q  D  K  *  K  G  K  L  V  C  *  P   : G  V  *  L  V  *  Y  K  T  Q  R  N  L  G  I  *  R  I  C  S  C  T  L  C  F  P  S  K  R  T  Y  R  *  Q  D  *  I :   F  F  S  A  I  *  S  Q  A  T  R  F  Y  *  E  T  R   : G  K  A  N  G  S  G  Y  S  C  G  V  W  Y  E  P  L  *  *  C  D  R  E  H  Y  *  Q   : D  F  *  R  S  R  Y  Q  A  *  W  K  D  R  *  G  G  M  E  K  L  S  V  A  T  S  F  T  F  E  E  H  D  P  P  I  S  Q  :  G  H  Y  Y  N  V  S  E  L  C  L  S  F  K  S  *  G  H  L  I  W  D  L  T  R  E  L  *  F  H  E  H  S  I  T  F  C  L  L  S  T  W  F  L  I  I  L  F  *  I  V  V  L  *  F  I  S  M  N  *  L  M  W  S  F  Y  *  L  I  R  T  K  Q  N   </first_frame>
            <second_frame>  K  T  K  K  K  *  I  R  L  R  R  A  S  S  F  S  Y  L  K  N  S  S  L  I  L  Q  S  S  Q  I  K  S  P  F  I  H  K   : H  I  *  L  H  I  D  R  F  Q  K  L  S  V  F  W  I  H  K  *  T  *  Q  R  M  V  E  R :   Y  G  V  F  *  I  *  D  V  T  M  L  Q  C  L  G  S  Y  L  S  R  C  C  D  L  D  F  K  Q  S  G  G  L  D  D  P  E  I  L  A  R  E  T  V   : F  S  V  S  E  I  E  A  L  Y  E  L  F  K  K  I  S  S  A  V  I  D  D  G  L  I  N  K  :  E  E  F  Q  L  A  L  F  K  T  N  K  K  E  S  L  F  A  D  R  :  V  F  D  L  F  D  T  K  H  N  G  I  L  G  F  E  E  F  A  R  A  L  S  V  F  H  P  N  A  P  I  D  D  K  I  E   : F  S  F  Q  L  Y  D  L  K  Q  Q  G  F  I  E  R  Q  E  :  V  K  Q  M  V  V  A  T  L  A  E  S  G  M  N  L  S  D  D  V  I  E  S  I  I  D  K  :  T  F  E  E  A  D  T  K  H  D  G  K  I  D  K  E  E  W  R  N  L  V  L  R  H  P  S  L  L  K  N  M  T  L  Q  Y  L  K :   D  I  T  T  T  F  P  S  F  V  F  H  S  R  V  E  D  T  *  F  G  I  *  Q  E  N  Y  D  S  M  N  I  V  *  H  S  V  C  S  L  H  G  F  L  L  F  F  F  E  *  L  F  C  D  L  F  L  *  I  D  *  C  G  V  S  I  D  *  L  E  P  N  K  T  </second_frame>
            <third_frame>   K  P  K  R  N  K  *  G  *  G  E  L  P  P  S  P  T  S  K  I  H  L  *  F  C  N  H  L  K  L  N  L  H  L  F  I  N  :  I  Y  S  C  I  *  I  G  F  R  N  F  Q  Y  F  G  F  I  N  R  H  N  R  E  W  S  K   : D  M  E  C  F  E  S  E  T  L  P  C  C  S  A  *  V  L  T  F  R  G  V  A  I  L  I  L  S  N  R  G  A  S  T  I  L  R  Y  L  H  E  R  Q  F  :  L  A  S  A  R  L  K  L  F  M  S  S  L  R  R  *  A  V  Q  *  L  M  M  V  *  S  T  R :   K  S  F  N  W  H  F  S  R  Q  I  K  R  K  A  C  L  L  T  G :   C  L  T  C  L  I  Q  N  T  T  E  S  W  D  L  K  N  L  L  V  H  S  L  F  S  I  Q  T  H  L  S  M  T  R  L  N  :  F  L  F  S  Y  M  I  S  S  N  K  V  L  L  R  D  K  R :   *  S  K  W  *  W  L  L  L  R  S  L  V  *  T  S  L  M  M  *  S  R  A  L  L  T  R :   L  L  K  K  P  I  P  S  M  M  E  R  S  I  R  R  N  G  E  T  *  C  C  D  I  L  H  F  *  R  T  *  P  S  N  I  S   : R  T  L  L  Q  R  F  R  A  L  S  F  I  Q  E  L  R  T  P  N  L  G  F  D  K  R  I  M  I  P  *  T  *  Y  N  I  L  F  A  L  Y  M  V  S  Y  Y  S  F  L  N  S  C  F  V  I  Y  F  Y  E  L  I  D  V  E  F  L  L  T  D  *  N  Q  T  K  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26280" stop="26391"/>
                    <exon start="27046" stop="27128"/>
                    <exon start="27300" stop="27359"/>
                    <exon start="28680" stop="28788"/>
                    <exon start="28874" stop="28926"/>
                    <exon start="29600" stop="29680"/>
                    <exon start="29926" stop="30038"/>
                    <exon start="30120" stop="30177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVTMLQCLGSYLSRCCDLDFKQSGGLDDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSRVEDT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24995" e_stop="25106"/>
            <exon e_start="26258" e_stop="26391"/>
            <exon e_start="27046" e_stop="27128"/>
            <exon e_start="27300" e_stop="27359"/>
            <exon e_start="28680" e_stop="28788"/>
            <exon e_start="28874" e_stop="28926"/>
            <exon e_start="29600" e_stop="29680"/>
            <exon e_start="29926" e_stop="30038"/>
            <exon e_start="30120" e_stop="30343"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.877" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24995" e_stop="25106" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="25107" i_stop="26257" i_length="1151"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26258" e_stop="26391" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.894" acc_prob="0.994">
            <gDNA_intron_boundary i_start="26392" i_stop="27045" i_length="654"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27046" e_stop="27128" e_length="83"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27300" e_stop="27359" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28680" e_stop="28788" e_length="109"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.877">
            <gDNA_intron_boundary i_start="28789" i_stop="28873" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28874" e_stop="28926" e_length="53"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.979">
            <gDNA_intron_boundary i_start="28927" i_stop="29599" i_length="673"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="29600" e_stop="29680" e_length="81"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29681" i_stop="29925" i_length="245"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="29926" e_stop="30038" e_length="113"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.978">
            <gDNA_intron_boundary i_start="30039" i_stop="30119" i_length="81"/>
          </intron>
          <exon e_serial="9" e_score="0.991">
            <gDNA_exon_boundary e_start="30120" e_stop="30343" e_length="224"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24995" stop="25106"/>
              <exon start="26258" stop="26330"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24996" stop="25106"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25001" stop="25106"/>
              <exon start="26258" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26374" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29680"/>
              <exon start="29926" stop="30038"/>
              <exon start="30120" stop="30343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26374" stop="26391"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28788"/>
              <exon start="28874" stop="28926"/>
              <exon start="29600" stop="29680"/>
              <exon start="29926" stop="30038"/>
              <exon start="30120" stop="30321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350737" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACCAAAAAGAAATAAATAAGGTTAAGGAGAGCTTCCTCCTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC : ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACAGTTT : TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG : GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG : GTGTTTGACTTGTTTGATACAAAACACAACGGAATCTTGGGATTTGAAGAATTTGCTCGTGCACTCTCTGTTTTCCATCCAAACGCACCTATCGATGACAAGATTGAAT : TTTCTTTTCAGCTATATGATCTCAAGCAACAAGGTTTTATTGAGAGACAAGAG : GTAAAGCAAATGGTAGTGGCTACTCTTGCGGAGTCTGGTATGAACCTCTCTGATGATGTGATCGAGAGCATTATTGACAAG : ACTTTTGAAGAAGCCGATACCAAGCATGATGGAAAGATCGATAAGGAGGAATGGAGAAACTTAGTGTTGCGACATCCTTCACTTTTGAAGAACATGACCCTCCAATATCTCAA : GGACATTACTACAACGTTTCCGAGCTTTGTCTTTCATTCAAGAGTTGAGGACACCTAATTTGGGATTTGACAAGAGAATTATGATTCCATGAACATAGTATAACATTCTGTTTGCTCTCTACATGGTTTCTTATTATTCTTTTTTGAATAGTTGTTTTGTGATTTATTTCTATGAATTGATTGATGTGGAGTTTCTATTGACTGATTAGAACCAAACAAAACCC</gDNA_template>
            <first_frame> K  T  K  K  K  *  I  R  L  R  R  A  S  S  F  S  Y  L  K  N  S  S  L  I  L  Q  S  S  Q  I  K  S  P  F  I  H  K   : H  M  E  C  F  E  S  E  T  L  P  C  C  S  A  *  V  L  T  F  R  G  V  A  I  L  I  L  S  N  R  G  A  S  T  I  L  R  Y  L  H  E  R  Q  F  :  L  A  S  A  R  L  K  L  F  M  S  S  L  R  R  *  A  V  Q  *  L  M  M  V  *  S  T  R :   K  S  F  N  W  H  F  S  R  Q  I  K  R  K  A  C  L  L  T  G :   C  L  T  C  L  I  Q  N  T  T  E  S  W  D  L  K  N  L  L  V  H  S  L  F  S  I  Q  T  H  L  S  M  T  R  L  N  :  F  L  F  S  Y  M  I  S  S  N  K  V  L  L  R  D  K  R :   *  S  K  W  *  W  L  L  L  R  S  L  V  *  T  S  L  M  M  *  S  R  A  L  L  T  R :   L  L  K  K  P  I  P  S  M  M  E  R  S  I  R  R  N  G  E  T  *  C  C  D  I  L  H  F  *  R  T  *  P  S  N  I  S   : R  T  L  L  Q  R  F  R  A  L  S  F  I  Q  E  L  R  T  P  N  L  G  F  D  K  R  I  M  I  P  *  T  *  Y  N  I  L  F  A  L  Y  M  V  S  Y  Y  S  F  L  N  S  C  F  V  I  Y  F  Y  E  L  I  D  V  E  F  L  L  T  D  *  N  Q  T  K  P </first_frame>
            <second_frame>  K  P  K  R  N  K  *  G  *  G  E  L  P  P  S  P  T  S  K  I  H  L  *  F  C  N  H  L  K  L  N  L  H  L  F  I  N  :  I  W  S  V  L  N  L  R  R  Y  H  A  A  V  L  R  F  L  P  F  E  V  L  R  S  *  F  *  A  I  G  G  P  R  R  S  *  D  T  C  T  R  D  S  F :   *  R  Q  R  D  *  S  S  L  *  A  L  *  E  D  K  Q  C  S  D  *  *  W  F  N  Q  Q   : G  R  V  S  I  G  T  F  Q  D  K  *  K  G  K  L  V  C  *  P   : G  V  *  L  V  *  Y  K  T  Q  R  N  L  G  I  *  R  I  C  S  C  T  L  C  F  P  S  K  R  T  Y  R  *  Q  D  *  I :   F  F  S  A  I  *  S  Q  A  T  R  F  Y  *  E  T  R   : G  K  A  N  G  S  G  Y  S  C  G  V  W  Y  E  P  L  *  *  C  D  R  E  H  Y  *  Q   : D  F  *  R  S  R  Y  Q  A  *  W  K  D  R  *  G  G  M  E  K  L  S  V  A  T  S  F  T  F  E  E  H  D  P  P  I  S  Q  :  G  H  Y  Y  N  V  S  E  L  C  L  S  F  K  S  *  G  H  L  I  W  D  L  T  R  E  L  *  F  H  E  H  S  I  T  F  C  L  L  S  T  W  F  L  I  I  L  F  *  I  V  V  L  *  F  I  S  M  N  *  L  M  W  S  F  Y  *  L  I  R  T  K  Q  N   </second_frame>
            <third_frame>   N  Q  K  E  I  N  K  V  K  E  S  F  L  L  L  L  P  Q  K  F  I  S  D  F  A  I  I  S  N  *  I  S  I  Y  S  *  T :   Y  G  V  F  *  I  *  D  V  T  M  L  Q  C  L  G  S  Y  L  S  R  C  C  D  L  D  F  K  Q  S  G  G  L  D  D  P  E  I  L  A  R  E  T  V   : F  S  V  S  E  I  E  A  L  Y  E  L  F  K  K  I  S  S  A  V  I  D  D  G  L  I  N  K  :  E  E  F  Q  L  A  L  F  K  T  N  K  K  E  S  L  F  A  D  R  :  V  F  D  L  F  D  T  K  H  N  G  I  L  G  F  E  E  F  A  R  A  L  S  V  F  H  P  N  A  P  I  D  D  K  I  E   : F  S  F  Q  L  Y  D  L  K  Q  Q  G  F  I  E  R  Q  E  :  V  K  Q  M  V  V  A  T  L  A  E  S  G  M  N  L  S  D  D  V  I  E  S  I  I  D  K  :  T  F  E  E  A  D  T  K  H  D  G  K  I  D  K  E  E  W  R  N  L  V  L  R  H  P  S  L  L  K  N  M  T  L  Q  Y  L  K :   D  I  T  T  T  F  P  S  F  V  F  H  S  R  V  E  D  T  *  F  G  I  *  Q  E  N  Y  D  S  M  N  I  V  *  H  S  V  C  S  L  H  G  F  L  L  F  F  F  E  *  L  F  C  D  L  F  L  *  I  D  *  C  G  V  S  I  D  *  L  E  P  N  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26280" stop="26391"/>
                    <exon start="27046" stop="27128"/>
                    <exon start="27300" stop="27359"/>
                    <exon start="28680" stop="28788"/>
                    <exon start="28874" stop="28926"/>
                    <exon start="29600" stop="29680"/>
                    <exon start="29926" stop="30038"/>
                    <exon start="30120" stop="30177"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVTMLQCLGSYLSRCCDLDFKQSGGLDDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSRVEDT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="25036" e_stop="25106"/>
            <exon e_start="26074" e_stop="26155"/>
            <exon e_start="26258" e_stop="26387"/>
            <exon e_start="27046" e_stop="27128"/>
            <exon e_start="27300" e_stop="27359"/>
            <exon e_start="28680" e_stop="28715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.952" e_score="0.972"/>
          <exon-intron don_prob="0.947" acc_prob="0.996" e_score="0.988"/>
          <exon-intron don_prob="0.708" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.997" e_score="0.988"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="25036" e_stop="25106" e_length="71"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.952">
            <gDNA_intron_boundary i_start="25107" i_stop="26073" i_length="967"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="26074" e_stop="26155" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.996">
            <gDNA_intron_boundary i_start="26156" i_stop="26257" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26258" e_stop="26387" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.708" acc_prob="0.994">
            <gDNA_intron_boundary i_start="26388" i_stop="27045" i_length="658"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="27046" e_stop="27128" e_length="83"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27129" i_stop="27299" i_length="171"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27300" e_stop="27359" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="27360" i_stop="28679" i_length="1320"/>
          </intron>
          <exon e_serial="6" e_score="0.972">
            <gDNA_exon_boundary e_start="28680" e_stop="28715" e_length="36"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25036" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26387"/>
              <exon start="27046" stop="27128"/>
              <exon start="27300" stop="27359"/>
              <exon start="28680" stop="28715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E360589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25068" stop="25106"/>
              <exon start="26074" stop="26155"/>
              <exon start="26258" stop="26387"/>
              <exon start="27046" stop="27078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E360748" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCCTACCTCAAAAATTCATCTCTGATTTTGCAATCATCTCAAATTAAATCTCCATTTATTCATAAAC : ATATATAGCTGCATATAGATAGGTTTCAGAAACTTTCAGTATTTTGGATTCATAAATAGACATAACAGAGAATGGTCGAAAG : ATATGGAGTGTTTTGAATCTGAGACGTTACCATGCTGCAGTGCTTAGGTTCTTACCTTTCGAGGTGTTGCGATCTTGATTTTAAGCAATCGGGGGGCCTCGACGATCCTGAGATACTTGCACGAGAGACA : TTAGCGTCAGCGAGATTGAAGCTCTTTATGAGCTCTTTAAGAAGATAAGCAGTGCAGTGATTGATGATGGTTTAATCAACAAG : GAAGAGTTTCAATTGGCACTTTTCAAGACAAATAAAAAGGAAAGCTTGTTTGCTGACCGG : GTGTTTGACTTGTTTGATACAAAACACAACGGAATC</gDNA_template>
            <first_frame> L  L  L  P  Q  K  F  I  S  D  F  A  I  I  S  N  *  I  S  I  Y  S  *  T :   Y  I  A  A  Y  R  *  V  S  E  T  F  S  I  L  D  S  *  I  D  I  T  E  N  G  R  K  :  I  W  S  V  L  N  L  R  R  Y  H  A  A  V  L  R  F  L  P  F  E  V  L  R  S  *  F  *  A  I  G  G  P  R  R  S  *  D  T  C  T  R  D   : I  S  V  S  E  I  E  A  L  Y  E  L  F  K  K  I  S  S  A  V  I  D  D  G  L  I  N  K  :  E  E  F  Q  L  A  L  F  K  T  N  K  K  E  S  L  F  A  D  R  :  V  F  D  L  F  D  T  K  H  N  G  I </first_frame>
            <second_frame>  F  S  Y  L  K  N  S  S  L  I  L  Q  S  S  Q  I  K  S  P  F  I  H  K   : H  I  *  L  H  I  D  R  F  Q  K  L  S  V  F  W  I  H  K  *  T  *  Q  R  M  V  E  R :   Y  G  V  F  *  I  *  D  V  T  M  L  Q  C  L  G  S  Y  L  S  R  C  C  D  L  D  F  K  Q  S  G  G  L  D  D  P  E  I  L  A  R  E  T  :  L  A  S  A  R  L  K  L  F  M  S  S  L  R  R  *  A  V  Q  *  L  M  M  V  *  S  T  R :   K  S  F  N  W  H  F  S  R  Q  I  K  R  K  A  C  L  L  T  G :   C  L  T  C  L  I  Q  N  T  T  E   </second_frame>
            <third_frame>   S  P  T  S  K  I  H  L  *  F  C  N  H  L  K  L  N  L  H  L  F  I  N  :  I  Y  S  C  I  *  I  G  F  R  N  F  Q  Y  F  G  F  I  N  R  H  N  R  E  W  S  K   : D  M  E  C  F  E  S  E  T  L  P  C  C  S  A  *  V  L  T  F  R  G  V  A  I  L  I  L  S  N  R  G  A  S  T  I  L  R  Y  L  H  E  R  H :   *  R  Q  R  D  *  S  S  L  *  A  L  *  E  D  K  Q  C  S  D  *  *  W  F  N  Q  Q   : G  R  V  S  I  G  T  F  Q  D  K  *  K  G  K  L  V  C  *  P   : G  V  *  L  V  *  Y  K  T  Q  R  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26369" stop="26387"/>
                    <exon start="27046" stop="27128"/>
                    <exon start="27300" stop="27359"/>
                    <exon start="28680" stop="28715"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DTCTRDISVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="36353" PGL_stop="32832"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36353" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36353" e_stop="36159" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34911" e_stop="32832" e_length="2080"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36352" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36349" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36343" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36343" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36342" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36341" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36340" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36340" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36340" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33438" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265790" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33437" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33431" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E411267" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33428" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33425" stop="32993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33424" stop="32947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33423" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567029" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33421" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33419" stop="33107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33413" stop="33076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33412" stop="32884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353791" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33409" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33409" stop="32992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33407" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33398" stop="32931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33395" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33386" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33385" stop="32875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33380" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33379" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33377" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33376" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467769" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33376" stop="33101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33372" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485966" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33372" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33371" stop="32924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349741" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33366" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33366" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33363" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33358" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33357" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33353" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33349" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33348" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33344" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33341" stop="32988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33330" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33328" stop="32832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33327" stop="32895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33321" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33317" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33310" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586110" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33303" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33302" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33300" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33296" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33295" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33294" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33291" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33284" stop="32893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33274" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33272" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33251" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33245" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> L  L  H  S  S  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L  G  T  I  A  R  S  G  T  K  E  F  M  E  A  L  A  A  G  A  D  V  S  M  I  G  Q  F  G  V  G  F  Y  S  A  Y  L  V  A  E  K  V  V  V  T  T  K  H  N  D  D  E  Q  Y  V  W  E  S  Q  A  G  G  S  F  T  V  T  R  D  T  S  G  E  N  L  G  R  G  T  K  M  V  L  Y  L  K  E  D  Q  L  E  Y  L  E  E  R  R  L  K  D  L  I  K  K  H  S  E  F  I  S  Y  P  I  S  L  W  V  E  K  T  I  E  K  E  I  S  D  D  E  E  E  E  E  K  K  D  E  E  G  K  V  E  E  V  D  E  E  K  E  K  E  E  K  K  K  K  K  V  K  E  V  S  N  E  W  S  L  V  N  K  Q  K  P  I  W  M  R  K  P  E  E  I  T  K  E  E  Y  A  A  F  Y  K  S  L  T  N  D  W  E  E  H  L  A  V  K  H  F  S  V  E  G  Q  L  E  F  K  A  V  L  F  V  P  K  R  A  P  F  D  L  F  D  T  K  K  K  P  N  N  I  K  L  Y  V  R  R  V  F  I  M  D  N  C  D  E  L  I  P  E  Y  L  S  F  V  K  G  I  V  D  S  E  D  L  P  L  N  I  S  R  E  T  L  Q  Q  N  K  I  L  K  V  I  R  K  N  L  V  K  K  C  V  E  L  F  F  E  I  A  E  N  K  E  D  Y  N  K  F  Y  E  A  F  S  K  N  L  K  L  G  I  H  E  D  S  Q  N  R  A  K  F  A  E  L  L  R  Y  H  S  T  K  S  G  D  E  M  T  S  L  K  D  Y  V  T  R  M  K  E  G  Q  N  D  I  Y  Y  I  T  G  E  S  K  K  A  V  E  N  S  P  F  L  E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  R  I  M  K  A  Q  A  L  R  D  S  S  M  A  G  Y  M  S  S  K  K  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </first_frame>
            <second_frame>  S  C  I  R  V  P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  V  Q  L  Q  G  Q  E  P  R  S  S  W  K  L  L  Q  L  V  L  M  L  A  *  L  V  N  S  V  *  V  S  T  L  L  T  W  *  L  R  R  L  L  *  P  Q  S  T  M  M  M  S  N  M  S  G  S  L  K  P  V  A  L  S  L  L  P  G  I  H  L  V  R  T  L  V  G  V  P  R  W  S  F  I  S  R  R  I  S  L  N  T  L  K  N  V  G  S  R  T  *  L  R  S  T  L  S  S  L  A  I  L  F  L  C  G  L  R  R  P  *  R  R  K  F  L  M  M  R  R  K  R  R  R  K  M  R  R  E  R  *  R  R  S  M  R  K  R  R  R  K  R  R  K  R  R  R  S  K  K  F  P  M  S  G  H  W  *  T  S  R  S  L  F  G  *  E  S  Q  K  R  S  Q  R  K  S  M  L  L  S  T  R  A  *  L  M  I  G  K  S  I  L  L  *  S  T  S  L  L  R  V  S  W  S  S  R  L  S  F  L  F  Q  K  G  L  L  L  T  S  L  T  Q  R  R  S  P  T  T  S  S  C  M  F  A  V  C  L  S  W  I  T  V  M  S  *  F  L  N  I  *  A  L  *  R  V  L  W  I  L  R  T  F  L  S  T  S  P  E  R  H  C  S  R  T  R  S  *  R  L  F  A  R  I  W  *  R  S  V  L  S  F  S  L  K  L  L  R  T  R  R  T  T  I  S  S  M  R  R  S  L  K  T  S  S  L  E  S  M  R  I  L  R  T  G  Q  S  L  L  N  C  *  G  T  T  P  L  R  V  V  M  R  *  P  A  *  R  T  M  *  P  E  *  R  R  A  R  M  I  F  T  T  L  L  V  R  A  R  R  L  L  R  T  L  P  S  W  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R  E  L  *  R  H  R  H  L  G  T  P  A  W  L  D  T  C  L  A  R  R  P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </second_frame>
            <third_frame>   L  A  F  E  S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G  Y  N  C  K  V  R  N  Q  G  V  H  G  S  S  C  S  W  C  *  C  *  H  D  W  S  I  R  C  R  F  L  L  C  L  L  G  S  *  E  G  C  C  D  H  K  A  Q  *  *  *  A  I  C  L  G  V  S  S  R  W  L  F  H  C  Y  Q  G  Y  I  W  *  E  P  W  *  G  Y  Q  D  G  P  L  S  Q  G  G  S  A  *  I  P  *  R  T  *  A  Q  G  P  D  *  E  A  L  *  V  H  *  L  S  Y  F  S  V  G  *  E  D  H  R  E  G  N  F  *  *  *  G  G  R  G  E  E  R  *  G  G  K  G  R  G  G  R  *  G  K  G  E  G  R  E  E  K  E  E  G  Q  R  S  F  Q  *  V  V  T  G  E  Q  A  E  A  Y  L  D  E  K  A  R  R  D  H  K  G  R  V  C  C  F  L  Q  E  L  D  *  *  L  G  R  A  S  C  C  E  A  L  L  C  *  G  S  V  G  V  Q  G  C  P  F  C  S  K  K  G  S  F  *  P  L  *  H  K  E  E  A  Q  Q  H  Q  V  V  C  S  P  C  V  Y  H  G  *  L  *  *  V  D  S  *  I  F  E  L  C  E  G  Y  C  G  F  *  G  P  S  S  Q  H  L  Q  R  D  I  A  A  E  Q  D  P  K  G  Y  S  Q  E  F  G  E  E  V  C  *  A  F  L  *  N  C  *  E  Q  G  G  L  Q  *  V  L  *  G  V  L  *  K  P  Q  A  W  N  P  *  G  F  S  E  Q  G  K  V  C  *  T  A  E  V  P  L  H  *  E  W  *  *  D  D  Q  L  E  G  L  C  D  Q  N  E  G  G  P  E  *  Y  L  L  H  Y  W  *  E  Q  E  G  C  *  E  L  S  L  P  G  E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G  E  N  Y  E  G  T  G  T  *  G  L  Q  H  G  W  I  H  V  *  Q  E  D  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="33077"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2109</number_coding_nucleotides>
                  <number_encoded_amino_acids>703</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="36353" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="33973"/>
            <exon e_start="33915" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36353" e_stop="36159" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="34911" e_stop="33973" e_length="939"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33972" i_stop="33916" i_length="57"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="33915" e_stop="32832" e_length="1084"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36352" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36349" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554228" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33357" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33353" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33349" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33348" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33344" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33341" stop="32988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33330" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33328" stop="32832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33327" stop="32895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33321" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33317" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33310" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586110" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33303" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33302" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33300" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33296" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33295" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33294" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33291" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33284" stop="32893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33274" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33272" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33251" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33245" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACA : ATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> L  L  H  S  S  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L  G  T  I  A  R  S  G  T  K  E  F  M  E  A  L  A  A  G  A  D  V  S  M  I  G  Q  F  G  V  G  F  Y  S  A  Y  L  V  A  E  K  V  V  V  T  T  K  H  N  D  D  E  Q  Y  V  W  E  S  Q  A  G  G  S  F  T  V  T  R  D  T  S  G  E  N  L  G  R  G  T  K  M  V  L  Y  L  K  E  D  Q  L  E  Y  L  E  E  R  R  L  K  D  L  I  K  K  H  S  E  F  I  S  Y  P  I  S  L  W  V  E  K  T  I  E  K  E  I  S  D  D  E  E  E  E  E  K  K  D  E  E  G  K  V  E  E  V  D  E  E  K  E  K  E  E  K  K  K  K  K  V  K  E  V  S  N  E  W  S  L  V  N  K  Q  K  P  I  W  M  R  K  P  E  E  I  T  K  E  E  Y  A  A  F  Y  K  S  L  T  N  D  W  E  E  H  L  A  V  K  H  F  S  V  E  G  Q  L  E  F  K  A  V  L  F  V  P  K  R  A  P  F  D  L  F  D  T  K  K  K  P  N  N  I  K  L  Y  V  R  R  V  F  I  M  D  N  C  D  E  L  I  P  E  Y  L  S  F  V  K  G  I  V  D  S  E  D  L  P  L  N  I  S  R  E  T  L  Q  Q  N  K  I  L  K  V  I  R  K  N  L  V  K  K  C  V  E  L  F  F  E  I  A  E  N   : N  E  D  S  Q  N  R  A  K  F  A  E  L  L  R  Y  H  S  T  K  S  G  D  E  M  T  S  L  K  D  Y  V  T  R  M  K  E  G  Q  N  D  I  Y  Y  I  T  G  E  S  K  K  A  V  E  N  S  P  F  L  E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  R  I  M  K  A  Q  A  L  R  D  S  S  M  A  G  Y  M  S  S  K  K  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </first_frame>
            <second_frame>  S  C  I  R  V  P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  V  Q  L  Q  G  Q  E  P  R  S  S  W  K  L  L  Q  L  V  L  M  L  A  *  L  V  N  S  V  *  V  S  T  L  L  T  W  *  L  R  R  L  L  *  P  Q  S  T  M  M  M  S  N  M  S  G  S  L  K  P  V  A  L  S  L  L  P  G  I  H  L  V  R  T  L  V  G  V  P  R  W  S  F  I  S  R  R  I  S  L  N  T  L  K  N  V  G  S  R  T  *  L  R  S  T  L  S  S  L  A  I  L  F  L  C  G  L  R  R  P  *  R  R  K  F  L  M  M  R  R  K  R  R  R  K  M  R  R  E  R  *  R  R  S  M  R  K  R  R  R  K  R  R  K  R  R  R  S  K  K  F  P  M  S  G  H  W  *  T  S  R  S  L  F  G  *  E  S  Q  K  R  S  Q  R  K  S  M  L  L  S  T  R  A  *  L  M  I  G  K  S  I  L  L  *  S  T  S  L  L  R  V  S  W  S  S  R  L  S  F  L  F  Q  K  G  L  L  L  T  S  L  T  Q  R  R  S  P  T  T  S  S  C  M  F  A  V  C  L  S  W  I  T  V  M  S  *  F  L  N  I  *  A  L  *  R  V  L  W  I  L  R  T  F  L  S  T  S  P  E  R  H  C  S  R  T  R  S  *  R  L  F  A  R  I  W  *  R  S  V  L  S  F  S  L  K  L  L  R  T  :  M  R  I  L  R  T  G  Q  S  L  L  N  C  *  G  T  T  P  L  R  V  V  M  R  *  P  A  *  R  T  M  *  P  E  *  R  R  A  R  M  I  F  T  T  L  L  V  R  A  R  R  L  L  R  T  L  P  S  W  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R  E  L  *  R  H  R  H  L  G  T  P  A  W  L  D  T  C  L  A  R  R  P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </second_frame>
            <third_frame>   L  A  F  E  S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G  Y  N  C  K  V  R  N  Q  G  V  H  G  S  S  C  S  W  C  *  C  *  H  D  W  S  I  R  C  R  F  L  L  C  L  L  G  S  *  E  G  C  C  D  H  K  A  Q  *  *  *  A  I  C  L  G  V  S  S  R  W  L  F  H  C  Y  Q  G  Y  I  W  *  E  P  W  *  G  Y  Q  D  G  P  L  S  Q  G  G  S  A  *  I  P  *  R  T  *  A  Q  G  P  D  *  E  A  L  *  V  H  *  L  S  Y  F  S  V  G  *  E  D  H  R  E  G  N  F  *  *  *  G  G  R  G  E  E  R  *  G  G  K  G  R  G  G  R  *  G  K  G  E  G  R  E  E  K  E  E  G  Q  R  S  F  Q  *  V  V  T  G  E  Q  A  E  A  Y  L  D  E  K  A  R  R  D  H  K  G  R  V  C  C  F  L  Q  E  L  D  *  *  L  G  R  A  S  C  C  E  A  L  L  C  *  G  S  V  G  V  Q  G  C  P  F  C  S  K  K  G  S  F  *  P  L  *  H  K  E  E  A  Q  Q  H  Q  V  V  C  S  P  C  V  Y  H  G  *  L  *  *  V  D  S  *  I  F  E  L  C  E  G  Y  C  G  F  *  G  P  S  S  Q  H  L  Q  R  D  I  A  A  E  Q  D  P  K  G  Y  S  Q  E  F  G  E  E  V  C  *  A  F  L  *  N  C  *  E  Q :   *  G  F  S  E  Q  G  K  V  C  *  T  A  E  V  P  L  H  *  E  W  *  *  D  D  Q  L  E  G  L  C  D  Q  N  E  G  G  P  E  *  Y  L  L  H  Y  W  *  E  Q  E  G  C  *  E  L  S  L  P  G  E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G  E  N  Y  E  G  T  G  T  *  G  L  Q  H  G  W  I  H  V  *  Q  E  D  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="33973"/>
                    <exon start="33915" stop="33077"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2052</number_coding_nucleotides>
                  <number_encoded_amino_acids>684</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENNEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="36353" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="33431"/>
            <exon e_start="33358" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36353" e_stop="36159" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34911" e_stop="33431" e_length="1481"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33430" i_stop="33359" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33358" e_stop="32832" e_length="527"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36353" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36352" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36349" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36343" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705415" strand="+"/>
          </PGS_line>
          <PGS_line>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAG : ATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> L  L  H  S  S  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L  G  T  I  A  R  S  G  T  K  E  F  M  E  A  L  A  A  G  A  D  V  S  M  I  G  Q  F  G  V  G  F  Y  S  A  Y  L  V  A  E  K  V  V  V  T  T  K  H  N  D  D  E  Q  Y  V  W  E  S  Q  A  G  G  S  F  T  V  T  R  D  T  S  G  E  N  L  G  R  G  T  K  M  V  L  Y  L  K  E  D  Q  L  E  Y  L  E  E  R  R  L  K  D  L  I  K  K  H  S  E  F  I  S  Y  P  I  S  L  W  V  E  K  T  I  E  K  E  I  S  D  D  E  E  E  E  E  K  K  D  E  E  G  K  V  E  E  V  D  E  E  K  E  K  E  E  K  K  K  K  K  V  K  E  V  S  N  E  W  S  L  V  N  K  Q  K  P  I  W  M  R  K  P  E  E  I  T  K  E  E  Y  A  A  F  Y  K  S  L  T  N  D  W  E  E  H  L  A  V  K  H  F  S  V  E  G  Q  L  E  F  K  A  V  L  F  V  P  K  R  A  P  F  D  L  F  D  T  K  K  K  P  N  N  I  K  L  Y  V  R  R  V  F  I  M  D  N  C  D  E  L  I  P  E  Y  L  S  F  V  K  G  I  V  D  S  E  D  L  P  L  N  I  S  R  E  T  L  Q  Q  N  K  I  L  K  V  I  R  K  N  L  V  K  K  C  V  E  L  F  F  E  I  A  E  N  K  E  D  Y  N  K  F  Y  E  A  F  S  K  N  L  K  L  G  I  H  E  D  S  Q  N  R  A  K  F  A  E  L  L  R  Y  H  S  T  K  S  G  D  E  M  T  S  L  K  D  Y  V  T  R  M  K  E  G  Q  N  D  I  Y  Y  I  T  G  E  S  K  K  A  V  E  N  S  P  F  L  E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  :  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </first_frame>
            <second_frame>  S  C  I  R  V  P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  V  Q  L  Q  G  Q  E  P  R  S  S  W  K  L  L  Q  L  V  L  M  L  A  *  L  V  N  S  V  *  V  S  T  L  L  T  W  *  L  R  R  L  L  *  P  Q  S  T  M  M  M  S  N  M  S  G  S  L  K  P  V  A  L  S  L  L  P  G  I  H  L  V  R  T  L  V  G  V  P  R  W  S  F  I  S  R  R  I  S  L  N  T  L  K  N  V  G  S  R  T  *  L  R  S  T  L  S  S  L  A  I  L  F  L  C  G  L  R  R  P  *  R  R  K  F  L  M  M  R  R  K  R  R  R  K  M  R  R  E  R  *  R  R  S  M  R  K  R  R  R  K  R  R  K  R  R  R  S  K  K  F  P  M  S  G  H  W  *  T  S  R  S  L  F  G  *  E  S  Q  K  R  S  Q  R  K  S  M  L  L  S  T  R  A  *  L  M  I  G  K  S  I  L  L  *  S  T  S  L  L  R  V  S  W  S  S  R  L  S  F  L  F  Q  K  G  L  L  L  T  S  L  T  Q  R  R  S  P  T  T  S  S  C  M  F  A  V  C  L  S  W  I  T  V  M  S  *  F  L  N  I  *  A  L  *  R  V  L  W  I  L  R  T  F  L  S  T  S  P  E  R  H  C  S  R  T  R  S  *  R  L  F  A  R  I  W  *  R  S  V  L  S  F  S  L  K  L  L  R  T  R  R  T  T  I  S  S  M  R  R  S  L  K  T  S  S  L  E  S  M  R  I  L  R  T  G  Q  S  L  L  N  C  *  G  T  T  P  L  R  V  V  M  R  *  P  A  *  R  T  M  *  P  E  *  R  R  A  R  M  I  F  T  T  L  L  V  R  A  R  R  L  L  R  T  L  P  S  W  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R :   S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </second_frame>
            <third_frame>   L  A  F  E  S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G  Y  N  C  K  V  R  N  Q  G  V  H  G  S  S  C  S  W  C  *  C  *  H  D  W  S  I  R  C  R  F  L  L  C  L  L  G  S  *  E  G  C  C  D  H  K  A  Q  *  *  *  A  I  C  L  G  V  S  S  R  W  L  F  H  C  Y  Q  G  Y  I  W  *  E  P  W  *  G  Y  Q  D  G  P  L  S  Q  G  G  S  A  *  I  P  *  R  T  *  A  Q  G  P  D  *  E  A  L  *  V  H  *  L  S  Y  F  S  V  G  *  E  D  H  R  E  G  N  F  *  *  *  G  G  R  G  E  E  R  *  G  G  K  G  R  G  G  R  *  G  K  G  E  G  R  E  E  K  E  E  G  Q  R  S  F  Q  *  V  V  T  G  E  Q  A  E  A  Y  L  D  E  K  A  R  R  D  H  K  G  R  V  C  C  F  L  Q  E  L  D  *  *  L  G  R  A  S  C  C  E  A  L  L  C  *  G  S  V  G  V  Q  G  C  P  F  C  S  K  K  G  S  F  *  P  L  *  H  K  E  E  A  Q  Q  H  Q  V  V  C  S  P  C  V  Y  H  G  *  L  *  *  V  D  S  *  I  F  E  L  C  E  G  Y  C  G  F  *  G  P  S  S  Q  H  L  Q  R  D  I  A  A  E  Q  D  P  K  G  Y  S  Q  E  F  G  E  E  V  C  *  A  F  L  *  N  C  *  E  Q  G  G  L  Q  *  V  L  *  G  V  L  *  K  P  Q  A  W  N  P  *  G  F  S  E  Q  G  K  V  C  *  T  A  E  V  P  L  H  *  E  W  *  *  D  D  Q  L  E  G  L  C  D  Q  N  E  G  G  P  E  *  Y  L  L  H  Y  W  *  E  Q  E  G  C  *  E  L  S  L  P  G  E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G   : D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="33431"/>
                    <exon start="33358" stop="33077"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2037</number_coding_nucleotides>
                  <number_encoded_amino_acids>679</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="36353" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="33562"/>
            <exon e_start="33367" e_stop="33316"/>
            <exon e_start="33114" e_stop="32888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.981"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36353" e_stop="36159" e_length="195"/>
          </exon>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34311" stop="33609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34305" stop="33999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34302" stop="33778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34297" stop="33684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34296" stop="33914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34288" stop="33769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34283" stop="33931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34282" stop="33631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34272" stop="33779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34271" stop="33576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576829" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34261" stop="33665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34248" stop="33766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34242" stop="33666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34226" stop="33764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34224" stop="33572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487802" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34223" stop="33731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34211" stop="33765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34209" stop="33771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34202" stop="33590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34192" stop="33678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34188" stop="33592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34188" stop="33592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486304" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34188" stop="33595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34188" stop="33646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34183" stop="33831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445281" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34182" stop="33771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34181" stop="33665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34177" stop="33599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34169" stop="33642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34149" stop="33572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34134" stop="33599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34134" stop="33840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34084" stop="33777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34050" stop="33643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204104" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34037" stop="33668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34014" stop="33571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34006" stop="33585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33991" stop="33562"/>
              <exon start="33367" stop="33316"/>
              <exon start="33114" stop="32930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33934" stop="33584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33884" stop="33726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33883" stop="33608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTGCATTCGAGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGCTTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCACTGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGAACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAATTTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTTCAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCGTGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGT : ACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGG : CTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCA</gDNA_template>
            <first_frame> L  L  H  S  S  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L  G  T  I  A  R  S  G  T  K  E  F  M  E  A  L  A  A  G  A  D  V  S  M  I  G  Q  F  G  V  G  F  Y  S  A  Y  L  V  A  E  K  V  V  V  T  T  K  H  N  D  D  E  Q  Y  V  W  E  S  Q  A  G  G  S  F  T  V  T  R  D  T  S  G  E  N  L  G  R  G  T  K  M  V  L  Y  L  K  E  D  Q  L  E  Y  L  E  E  R  R  L  K  D  L  I  K  K  H  S  E  F  I  S  Y  P  I  S  L  W  V  E  K  T  I  E  K  E  I  S  D  D  E  E  E  E  E  K  K  D  E  E  G  K  V  E  E  V  D  E  E  K  E  K  E  E  K  K  K  K  K  V  K  E  V  S  N  E  W  S  L  V  N  K  Q  K  P  I  W  M  R  K  P  E  E  I  T  K  E  E  Y  A  A  F  Y  K  S  L  T  N  D  W  E  E  H  L  A  V  K  H  F  S  V  E  G  Q  L  E  F  K  A  V  L  F  V  P  K  R  A  P  F  D  L  F  D  T  K  K  K  P  N  N  I  K  L  Y  V  R  R  V  F  I  M  D  N  C  D  E  L  I  P  E  Y  L  S  F  V  K  G  I  V  D  S  E  D  L  P  L  N  I  S  R  E  T  L  Q  Q  N  K  I  L  K  V  I  R  K  N  L  V  K  K  C  V  E  L  F  F  E  I  A  E  N  K  E  D  Y  N  K  F  Y  E  A  F  S  K  N  L  K  L  G  I  H  E  D  S  Q  N  R  A  K  F  A  E  L  L  R  Y  H  S  T  K  S  G  D  E  M  T  S  L  K  D  Y  V  T  R  M  K  E  G  Q  N  D  I  Y  Y  I  T  G  E  S  K  K  A  V  E  N  S  P  F  L  E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K   : Y  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G :   *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  </first_frame>
            <second_frame>  S  C  I  R  V  P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  V  Q  L  Q  G  Q  E  P  R  S  S  W  K  L  L  Q  L  V  L  M  L  A  *  L  V  N  S  V  *  V  S  T  L  L  T  W  *  L  R  R  L  L  *  P  Q  S  T  M  M  M  S  N  M  S  G  S  L  K  P  V  A  L  S  L  L  P  G  I  H  L  V  R  T  L  V  G  V  P  R  W  S  F  I  S  R  R  I  S  L  N  T  L  K  N  V  G  S  R  T  *  L  R  S  T  L  S  S  L  A  I  L  F  L  C  G  L  R  R  P  *  R  R  K  F  L  M  M  R  R  K  R  R  R  K  M  R  R  E  R  *  R  R  S  M  R  K  R  R  R  K  R  R  K  R  R  R  S  K  K  F  P  M  S  G  H  W  *  T  S  R  S  L  F  G  *  E  S  Q  K  R  S  Q  R  K  S  M  L  L  S  T  R  A  *  L  M  I  G  K  S  I  L  L  *  S  T  S  L  L  R  V  S  W  S  S  R  L  S  F  L  F  Q  K  G  L  L  L  T  S  L  T  Q  R  R  S  P  T  T  S  S  C  M  F  A  V  C  L  S  W  I  T  V  M  S  *  F  L  N  I  *  A  L  *  R  V  L  W  I  L  R  T  F  L  S  T  S  P  E  R  H  C  S  R  T  R  S  *  R  L  F  A  R  I  W  *  R  S  V  L  S  F  S  L  K  L  L  R  T  R  R  T  T  I  S  S  M  R  R  S  L  K  T  S  S  L  E  S  M  R  I  L  R  T  G  Q  S  L  L  N  C  *  G  T  T  P  L  R  V  V  M  R  *  P  A  *  R  T  M  *  P  E  *  R  R  A  R  M  I  F  T  T  L  L  V  R  A  R  R  L  L  R  T  L  P  S  W  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  :  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R   : A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P </second_frame>
            <third_frame>   L  A  F  E  S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G  Y  N  C  K  V  R  N  Q  G  V  H  G  S  S  C  S  W  C  *  C  *  H  D  W  S  I  R  C  R  F  L  L  C  L  L  G  S  *  E  G  C  C  D  H  K  A  Q  *  *  *  A  I  C  L  G  V  S  S  R  W  L  F  H  C  Y  Q  G  Y  I  W  *  E  P  W  *  G  Y  Q  D  G  P  L  S  Q  G  G  S  A  *  I  P  *  R  T  *  A  Q  G  P  D  *  E  A  L  *  V  H  *  L  S  Y  F  S  V  G  *  E  D  H  R  E  G  N  F  *  *  *  G  G  R  G  E  E  R  *  G  G  K  G  R  G  G  R  *  G  K  G  E  G  R  E  E  K  E  E  G  Q  R  S  F  Q  *  V  V  T  G  E  Q  A  E  A  Y  L  D  E  K  A  R  R  D  H  K  G  R  V  C  C  F  L  Q  E  L  D  *  *  L  G  R  A  S  C  C  E  A  L  L  C  *  G  S  V  G  V  Q  G  C  P  F  C  S  K  K  G  S  F  *  P  L  *  H  K  E  E  A  Q  Q  H  Q  V  V  C  S  P  C  V  Y  H  G  *  L  *  *  V  D  S  *  I  F  E  L  C  E  G  Y  C  G  F  *  G  P  S  S  Q  H  L  Q  R  D  I  A  A  E  Q  D  P  K  G  Y  S  Q  E  F  G  E  E  V  C  *  A  F  L  *  N  C  *  E  Q  G  G  L  Q  *  V  L  *  G  V  L  *  K  P  Q  A  W  N  P  *  G  F  S  E  Q  G  K  V  C  *  T  A  E  V  P  L  H  *  E  W  *  *  D  D  Q  L  E  G  L  C  D  Q  N  E  G  G  P  E  *  Y  L  L  H  Y  W  *  E  Q  E  G  C  *  E  L  S  L  P  G  E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V :   P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  :  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="33562"/>
                    <exon start="33367" stop="33330"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1662</number_coding_nucleotides>
                  <number_encoded_amino_acids>554</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKYHGDQPRELHHG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="36339" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="34894"/>
            <exon e_start="34149" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36339" e_stop="36159" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34911" e_stop="34894" e_length="18"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="34893" i_stop="34150" i_length="744"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="34149" e_stop="32832" e_length="1318"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36159"/>
              <exon start="35163" stop="35028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36325" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34894"/>
              <exon start="34149" stop="33630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36324" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36312" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36301" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36301" stop="36159"/>
              <exon start="35163" stop="35022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400294" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36291" stop="36159"/>
              <exon start="35163" stop="35032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36265" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469417" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36252" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36208" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34149" stop="33572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34141" stop="33487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34140" stop="33550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34138" stop="33445"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34134" stop="33599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34134" stop="33840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34099" stop="33370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34099" stop="33390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456972" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34099" stop="33548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34097" stop="33422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34088" stop="33423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34087" stop="33439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34084" stop="33472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485812" strand="+"/>
          </PGS_line>
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            <gDNA_exon_coordinates>
              <exon start="33357" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33353" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33349" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33348" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33344" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33341" stop="32988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33330" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33328" stop="32832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33327" stop="32895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33321" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33317" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33310" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586110" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33303" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33302" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33300" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33296" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33295" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33294" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33291" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33284" stop="32893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33274" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33272" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33251" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33245" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGG : ATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAACATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGCAAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G :   *  L  *  *  V  D  S  *  I  F  E  L  C  E  G  Y  C  G  F  *  G  P  S  S  Q  H  L  Q  R  D  I  A  A  E  Q  D  P  K  G  Y  S  Q  E  F  G  E  E  V  C  *  A  F  L  *  N  C  *  E  Q  G  G  L  Q  *  V  L  *  G  V  L  *  K  P  Q  A  W  N  P  *  G  F  S  E  Q  G  K  V  C  *  T  A  E  V  P  L  H  *  E  W  *  *  D  D  Q  L  E  G  L  C  D  Q  N  E  G  G  P  E  *  Y  L  L  H  Y  W  *  E  Q  E  G  C  *  E  L  S  L  P  G  E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G  E  N  Y  E  G  T  G  T  *  G  L  Q  H  G  W  I  H  V  *  Q  E  D  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </first_frame>
            <second_frame>  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L   : D  N  C  D  E  L  I  P  E  Y  L  S  F  V  K  G  I  V  D  S  E  D  L  P  L  N  I  S  R  E  T  L  Q  Q  N  K  I  L  K  V  I  R  K  N  L  V  K  K  C  V  E  L  F  F  E  I  A  E  N  K  E  D  Y  N  K  F  Y  E  A  F  S  K  N  L  K  L  G  I  H  E  D  S  Q  N  R  A  K  F  A  E  L  L  R  Y  H  S  T  K  S  G  D  E  M  T  S  L  K  D  Y  V  T  R  M  K  E  G  Q  N  D  I  Y  Y  I  T  G  E  S  K  K  A  V  E  N  S  P  F  L  E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  R  I  M  K  A  Q  A  L  R  D  S  S  M  A  G  Y  M  S  S  K  K  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </second_frame>
            <third_frame>   P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  :  I  T  V  M  S  *  F  L  N  I  *  A  L  *  R  V  L  W  I  L  R  T  F  L  S  T  S  P  E  R  H  C  S  R  T  R  S  *  R  L  F  A  R  I  W  *  R  S  V  L  S  F  S  L  K  L  L  R  T  R  R  T  T  I  S  S  M  R  R  S  L  K  T  S  S  L  E  S  M  R  I  L  R  T  G  Q  S  L  L  N  C  *  G  T  T  P  L  R  V  V  M  R  *  P  A  *  R  T  M  *  P  E  *  R  R  A  R  M  I  F  T  T  L  L  V  R  A  R  R  L  L  R  T  L  P  S  W  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R  E  L  *  R  H  R  H  L  G  T  P  A  W  L  D  T  C  L  A  R  R  P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="34894"/>
                    <exon start="34149" stop="33077"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1365</number_coding_nucleotides>
                  <number_encoded_amino_acids>455</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="36339" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="34894"/>
            <exon e_start="33738" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36339" e_stop="36159" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34911" e_stop="34894" e_length="18"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="34893" i_stop="33739" i_length="1155"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33738" e_stop="32832" e_length="907"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34894"/>
              <exon start="33738" stop="33423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36159"/>
              <exon start="35163" stop="35028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36329" stop="36177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36324" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36312" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36301" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36301" stop="36159"/>
              <exon start="35163" stop="35022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400294" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36291" stop="36159"/>
              <exon start="35163" stop="35032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36265" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469417" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36252" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36208" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33736" stop="33337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33734" stop="33234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33720" stop="33331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33711" stop="33066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33709" stop="33004"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33709" stop="33077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575695" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33708" stop="33260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33708" stop="33434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33699" stop="33174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33686" stop="32935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585493" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33685" stop="32891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33680" stop="32950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33662" stop="32980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33661" stop="33093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33659" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33650" stop="32920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33649" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33643" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33642" stop="33166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33642" stop="33166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33629" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425228" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33629" stop="32993"/>
            </gDNA_exon_coordinates>
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              <exon start="33310" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586110" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33303" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33302" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33300" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33296" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33295" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33294" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33291" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33284" stop="32893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33274" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33272" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33251" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33245" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGG : AGAAACTGAAGAAGAAGGGATATGAGGTGCTTTACATGGTTGATGCCATTGATGAGTATTCAATTGGTCAGCTGAAGGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G :   E  T  E  E  E  G  I  *  G  A  L  H  G  *  C  H  *  *  V  F  N  W  S  A  E  G  I  *  G  Q  K  A  C  F  C  Y  Q  G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G  E  N  Y  E  G  T  G  T  *  G  L  Q  H  G  W  I  H  V  *  Q  E  D  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </first_frame>
            <second_frame>  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L   : E  K  L  K  K  K  G  Y  E  V  L  Y  M  V  D  A  I  D  E  Y  S  I  G  Q  L  K  E  F  E  G  K  K  L  V  S  A  T  K  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  R  I  M  K  A  Q  A  L  R  D  S  S  M  A  G  Y  M  S  S  K  K  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </second_frame>
            <third_frame>   P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  :  R  N  *  R  R  R  D  M  R  C  F  T  W  L  M  P  L  M  S  I  Q  L  V  S  *  R  N  L  R  A  K  S  L  F  L  L  P  R  K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R  E  L  *  R  H  R  H  L  G  T  P  A  W  L  D  T  C  L  A  R  R  P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="34894"/>
                    <exon start="33738" stop="33077"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>954</number_coding_nucleotides>
                  <number_encoded_amino_acids>318</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="36339" e_stop="36159"/>
            <exon e_start="35163" e_stop="35022"/>
            <exon e_start="34911" e_stop="34868"/>
            <exon e_start="33625" e_stop="32832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.229" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36339" e_stop="36159" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36158" i_stop="35164" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35163" e_stop="35022" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.229" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35021" i_stop="34912" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34911" e_stop="34868" e_length="44"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="34867" i_stop="33626" i_length="1242"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33625" e_stop="32832" e_length="794"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36339" stop="36159"/>
              <exon start="35163" stop="35055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36338" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212705" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34868"/>
              <exon start="33625" stop="33422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34868"/>
              <exon start="33625" stop="33431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36335" stop="36159"/>
              <exon start="35163" stop="35022"/>
              <exon start="34911" stop="34907"/>
            </gDNA_exon_coordinates>
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              <exon start="33366" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33366" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33363" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33358" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33357" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33353" stop="32890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33349" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33348" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33344" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33341" stop="32988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33330" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33328" stop="32832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33327" stop="32895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33321" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33317" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33316" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33310" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586110" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33305" stop="32953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33304" stop="32929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33303" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33302" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33300" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33296" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33295" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33294" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33291" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33290" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33284" stop="32893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33274" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33272" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33251" stop="32932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33250" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33245" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33243" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33241" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33239" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33237" stop="32923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33234" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33223" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33212" stop="32921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330367" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33209" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33196" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33195" stop="32905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33192" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33188" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33084" stop="32888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAATTCTTCCGAT : GCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATTCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTG : ATCTGGTGAATAACCTGGGTACAATTGCAAGGTCAGGAACCAAG : GAAGGCCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAGTTTGAGGGACTGTGTAAGGTGATGAAGGATGTGCTAGGAGACAAAGTTGAAAAGGTCATTGTTTCTGACCGTGTTGTTGACTCTCCCTGCTGTTTGGTCACTGGTGAGTATGGCTGGACTGCTAACATGGAGAGAATTATGAAGGCACAGGCACTTAGGGACTCCAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCATGGATGAGCTAAGGAAGAGGGCTGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCTTGCTTTTTGAGACTGCCCTTCTCACCTCAGGTTTCAGCCTCGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGTTGAAACTCGGTTTGAGCATTGATGAGGAAAGCGGAGATGCTGATGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTTGATTAAGTTCATTAATGTTTTGATAGTTTTATGGGTTCCTTTACTACTACTTTATTCCCTAGTTTTTGCTTTATCCCATCAGAACAATATGTGAGGGTTTTAATGCCGTTCTTTTAGAATGGCAGTTCAATGTTAGGTTATAATTCTCTTTTTTGTTTTGACATTCGTGGTTGATATAGTTTATTTTCTTGCCCAGCTCTTTCTTTCTGTGAAATATTTTACTTTGCTCCCCCCTAATTCTGGATCATATA</gDNA_template>
            <first_frame> S  L  C  V  P  F  R  L  T  V  F  F  S  S  L  D  L  Q  K  N  V  G  R  R  D  V  C  F  P  G  *  D  Q  S  A  S  Q  S  Y  H  Q  H  F  L  Q  Q  Q  G  D  L  S  P  *  T  H  Q  Q  F  F  R   : C  S  R  Q  D  P  L  *  E  F  N  R  Q  E  Q  A  R  W  S  T  R  A  L  H  P  Y  Y  S  R  Q  G  Q  *  Y  S  H  Y  H  *  *  W  Y  W  Y  D  K  G  * :   S  G  E  *  P  G  Y  N  C  K  V  R  N  Q   : G  R  P  Q  A  *  *  E  *  R  *  E  E  K  A  G  R  I  E  G  E  V  *  G  T  V  *  G  D  E  G  C  A  R  R  Q  S  *  K  G  H  C  F  *  P  C  C  *  L  S  L  L  F  G  H  W  *  V  W  L  D  C  *  H  G  E  N  Y  E  G  T  G  T  *  G  L  Q  H  G  W  I  H  V  *  Q  E  D  H  G  D  Q  P  R  E  L  H  H  G  *  A  K  E  E  G  *  C  R  Q  E  *  Q  V  C  E  G  L  G  S  L  A  F  *  D  C  P  S  H  L  R  F  Q  P  R  G  A  K  H  L  W  Q  Q  N  S  Q  D  V  E  T  R  F  E  H  *  *  G  K  R  R  C  *  C  *  H  A  S  I  G  G  S  *  S  *  C  *  G  Q  Q  D  G  G  G  *  L  S  S  L  M  F  *  *  F  Y  G  F  L  Y  Y  Y  F  I  P  *  F  L  L  Y  P  I  R  T  I  C  E  G  F  N  A  V  L  L  E  W  Q  F  N  V  R  L  *  F  S  F  L  F  *  H  S  W  L  I  *  F  I  F  L  P  S  S  F  F  L  *  N  I  L  L  C  S  P  L  I  L  D  H  I </first_frame>
            <second_frame>  P  F  V  F  H  F  A  L  Q  F  S  S  A  R  *  I  Y  K  K  M  S  D  V  E  T  F  A  F  Q  A  E  I  N  Q  L  L  S  L  I  I  N  T  F  Y  S  N  K  E  I  F  L  R  E  L  I  S  N  S  S  D  :  A  L  D  K  I  R  F  E  S  L  T  D  K  S  K  L  D  G  Q  P  E  L  F  I  H  I  I  P  D  K  A  N  N  T  L  T  I  I  D  S  G  I  G  M  T  K  A   : D  L  V  N  N  L  G  T  I  A  R  S  G  T  K  :  E  G  L  K  L  D  E  S  E  D  E  K  K  K  Q  E  E  L  K  E  K  F  E  G  L  C  K  V  M  K  D  V  L  G  D  K  V  E  K  V  I  V  S  D  R  V  V  D  S  P  C  C  L  V  T  G  E  Y  G  W  T  A  N  M  E  R  I  M  K  A  Q  A  L  R  D  S  S  M  A  G  Y  M  S  S  K  K  T  M  E  I  N  P  E  N  S  I  M  D  E  L  R  K  R  A  D  A  D  K  N  D  K  S  V  K  D  L  V  L  L  L  F  E  T  A  L  L  T  S  G  F  S  L  E  E  P  N  T  F  G  N  R  I  H  R  M  L  K  L  G  L  S  I  D  E  E  S  G  D  A  D  A  D  M  P  A  L  E  D  P  E  A  D  A  E  G  S  K  M  E  E  V  D  *  V  H  *  C  F  D  S  F  M  G  S  F  T  T  T  L  F  P  S  F  C  F  I  P  S  E  Q  Y  V  R  V  L  M  P  F  F  *  N  G  S  S  M  L  G  Y  N  S  L  F  C  F  D  I  R  G  *  Y  S  L  F  S  C  P  A  L  S  F  C  E  I  F  Y  F  A  P  P  *  F  W  I  I   </second_frame>
            <third_frame>   P  L  C  S  I  S  P  Y  S  F  L  Q  L  V  R  S  T  K  K  C  R  T  *  R  R  L  L  S  R  L  R  S  I  S  F  S  V  L  S  S  T  L  S  T  A  T  R  R  S  F  S  V  N  S  S  A  I  L  P  M :   L  *  T  R  S  A  L  R  V  *  P  T  R  A  S  *  M  V  N  Q  S  S  S  S  I  L  F  Q  T  R  P  I  I  L  S  L  S  L  I  V  V  L  V  *  Q  R  L  :  I  W  *  I  T  W  V  Q  L  Q  G  Q  E  P  R :   K  A  S  S  L  M  R  V  K  M  R  R  K  S  R  K  N  *  R  R  S  L  R  D  C  V  R  *  *  R  M  C  *  E  T  K  L  K  R  S  L  F  L  T  V  L  L  T  L  P  A  V  W  S  L  V  S  M  A  G  L  L  T  W  R  E  L  *  R  H  R  H  L  G  T  P  A  W  L  D  T  C  L  A  R  R  P  W  R  S  T  Q  R  T  P  S  W  M  S  *  G  R  G  L  M  Q  T  R  M  T  S  L  *  R  T  W  F  S  C  F  L  R  L  P  F  S  P  Q  V  S  A  S  R  S  Q  T  P  L  A  T  E  F  T  G  C  *  N  S  V  *  A  L  M  R  K  A  E  M  L  M  L  T  C  Q  H  W  R  I  L  K  L  M  L  R  A  A  R  W  R  R  L  I  K  F  I  N  V  L  I  V  L  W  V  P  L  L  L  L  Y  S  L  V  F  A  L  S  H  Q  N  N  M  *  G  F  *  C  R  S  F  R  M  A  V  Q  C  *  V  I  I  L  F  F  V  L  T  F  V  V  D  I  V  Y  F  L  A  Q  L  F  L  S  V  K  Y  F  T  L  L  P  P  N  S  G  S  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36293" stop="36159"/>
                    <exon start="35163" stop="35022"/>
                    <exon start="34911" stop="34868"/>
                    <exon start="33625" stop="33077"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYKKMSDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="32881" PGL_stop="34147"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32881" e_stop="34064"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="32881" e_stop="34064" e_length="1184"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32881" stop="33642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32881" stop="33540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32887" stop="33428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32890" stop="33554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32892" stop="33337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32894" stop="33315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32901" stop="33723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32901" stop="33720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32901" stop="33689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32902" stop="33697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32902" stop="33574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32903" stop="33729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32903" stop="33433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32905" stop="33268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32906" stop="33731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32912" stop="33213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32913" stop="33664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32921" stop="33672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32928" stop="33715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32933" stop="33399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32936" stop="33502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32960" stop="33611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33543" stop="33837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33739" stop="34064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAGCTGGGCAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCT</gDNA_template>
            <first_frame> K  E  L  G  K  K  I  N  Y  I  N  H  E  C  Q  N  K  K  E  N  Y  N  L  T  L  N  C  H  S  K  R  T  A  L  K  P  S  H  I  V  L  M  G  *  S  K  N  *  G  I  K  *  *  *  R  N  P  *  N  Y  Q  N  I  N  E  L  N  Q  P  P  P  S  C  C  P  Q  H  Q  L  Q  D  P  P  M  L  A  C  Q  H  Q  H  L  R  F  P  H  Q  C  S  N  R  V  S  T  S  C  E  F  C  C  Q  R  C  L  A  P  R  G  *  N  L  R  *  E  G  Q  S  Q  K  A  R  E  P  S  P  S  Q  T  C  H  S  C  L  H  Q  P  S  S  L  A  H  P  *  W  S  S  L  G  *  S  P  W  S  S  C  *  T  C  I  Q  P  C  W  S  P  *  V  P  V  P  S  *  F  S  P  C  *  Q  S  S  H  T  H  Q  *  P  N  S  R  E  S  Q  Q  H  G  Q  K  Q  *  P  F  Q  L  C  L  L  A  H  P  S  S  P  Y  T  V  P  Q  T  S  P  S  I  L  P  A  F  S  S  H  L  H  S  H  Q  A  *  G  L  P  W  *  Q  K  Q  A  F  C  P  Q  I  P  S  A  D  Q  L  N  T  H  Q  W  H  Q  P  C  K  A  P  H  I  P  S  S  S  V  S  P  G  R  E  S  S  Q  Q  P  S  C  S  H  Q  *  C  S  K  Y  H  S  G  P  P  S  F  W  S  H  S  P  S  S  W  S  S  H  H  H  S  *  W  S  G  T  S  A  V  Q  Q  T  L  P  C  S  E  N  P  H  G  F  Q  A  *  G  F  *  R  T  P  H  R  T  Y  C  S  P  P  C  S  Q  Q  F  Q  R  K  A  Q  H  T  S  S  P  N  S  C  E  *  P  L  G  S  C  S  A  A  M  S   </first_frame>
            <second_frame>  K  S  W  A  R  K  *  T  I  S  T  T  N  V  K  T  K  K  R  I  I  T  *  H  *  T  A  I  L  K  E  R  H  *  N  P  H  I  L  F  *  W  D  K  A  K  T  R  E  *  S  S  S  K  G  T  H  K  T  I  K  T  L  M  N  L  I  N  L  L  H  L  A  A  L  S  I  S  F  R  I  L  Q  C  W  H  V  S  I  S  I  S  A  F  L  I  N  A  Q  T  E  F  Q  H  P  V  N  S  V  A  K  G  V  W  L  L  E  A  E  T  *  G  E  K  G  S  L  K  K  Q  E  N  Q  V  L  H  R  L  V  I  L  V  C  I  S  P  L  P  *  L  I  H  D  G  V  L  W  V  D  L  H  G  L  L  A  R  H  V  S  S  H  A  G  V  P  K  C  L  C  L  H  N  S  L  H  V  S  S  P  A  I  L  T  S  D  Q  T  A  G  R  V  N  N  T  V  R  N  N  D  L  F  N  F  V  S  *  H  I  L  H  H  L  T  Q  S  L  K  L  L  L  Q  F  F  L  L  F  L  L  I  F  T  L  I  K  L  E  A  F  L  G  S  R  N  K  L  F  A  L  K  F  L  Q  L  T  N  *  I  L  I  N  G  I  N  H  V  K  H  L  I  S  L  L  L  Q  F  L  Q  E  G  R  V  L  N  S  L  L  A  L  T  S  N  V  V  N  I  I  L  A  L  L  H  S  G  H  I  V  L  Q  A  G  H  L  I  T  T  L  S  G  V  V  P  Q  Q  F  S  K  L  C  P  V  L  R  I  L  M  D  S  K  L  E  V  F  R  E  R  L  I  E  L  I  V  V  L  L  V  L  S  N  F  K  E  K  L  N  T  L  L  H  Q  I  L  A  N  N  L  *  D  L  V  L  L  Q  C  L  </second_frame>
            <third_frame>   R  A  G  Q  E  N  K  L  Y  Q  P  R  M  S  K  Q  K  R  E  L  *  P  N  I  E  L  P  F  *  K  N  G  I  K  T  L  T  Y  C  S  D  G  I  K  Q  K  L  G  N  K  V  V  V  K  E  P  I  K  L  S  K  H  *  *  T  *  S  T  S  S  I  L  L  P  S  A  S  A  S  G  S  S  N  A  G  M  S  A  S  A  S  P  L  S  S  S  M  L  K  P  S  F  N  I  L  *  I  L  L  P  K  V  F  G  S  S  R  L  K  P  E  V  R  R  A  V  S  K  S  K  R  T  K  S  F  T  D  L  S  F  L  S  A  S  A  L  F  L  S  S  S  M  M  E  F  S  G  L  I  S  M  V  F  L  L  D  M  Y  P  A  M  L  E  S  L  S  A  C  A  F  I  I  L  S  M  L  A  V  Q  P  Y  S  P  V  T  K  Q  Q  G  E  S  T  T  R  S  E  T  M  T  F  S  T  L  S  P  S  T  S  F  I  T  L  H  S  P  S  N  F  S  F  N  S  S  C  F  F  F  S  S  S  L  S  S  S  L  R  P  S  L  V  A  E  T  S  F  L  P  S  N  S  F  S  *  P  I  E  Y  S  S  M  A  S  T  M  *  S  T  S  Y  P  F  F  F  S  F  S  R  K  G  E  F  S  T  A  F  L  L  S  P  V  M  *  *  I  S  F  W  P  S  F  I  L  V  T  *  S  F  K  L  V  I  S  S  P  L  L  V  E  W  Y  L  S  S  S  A  N  F  A  L  F  *  E  S  S  W  I  P  S  L  R  F  L  E  N  A  S  *  N  L  L  *  S  S  L  F  S  A  I  S  K  K  S  S  T  H  F  F  T  K  F  L  R  I  T  F  R  I  L  F  C  C  N  V  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33201" stop="33671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLPKVFGSSRLKPEVRRAVSKSKRTKSFTDLSFLSASALFLSSSMMEFSGLISMVFLLDMYPAMLESLSACAFIILSMLAVQPYSPVTKQQGESTTRSETMTFSTLSPSTSFITLHSPSNFSFNSSCFFFSSSLSSSLRPSLVAETSFLPSNSFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33680" stop="34039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILINGINHVKHLISLLLQFLQEGRVLNSLLALTSNVVNIILALLHSGHIVLQAGHLITTLSGVVPQQFSKLCPVLRILMDSKLEVFRERLIELIVVLLVLSNFKEKLNTLLHQILANNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="32881" e_stop="33715"/>
            <exon e_start="34100" e_stop="34147"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32881" e_stop="33715" e_length="835"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33716" i_stop="34099" i_length="384"/>
          </intron>
          <exon e_serial="2" e_score="0.917">
            <gDNA_exon_boundary e_start="34100" e_stop="34147" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32881" stop="33642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32881" stop="33540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32887" stop="33428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32890" stop="33554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32892" stop="33337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32894" stop="33315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32901" stop="33689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32902" stop="33697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32902" stop="33574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32903" stop="33433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32905" stop="33268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32912" stop="33213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32913" stop="33664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32921" stop="33672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32928" stop="33715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32933" stop="33399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32936" stop="33502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32960" stop="33611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33095" stop="33715"/>
              <exon start="34100" stop="34147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455035" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAGCTGGGCAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTC : AATACCCTTCACAAAGCTCAAATATTCAGGAATCAACTCATCACAGTT</gDNA_template>
            <first_frame> K  E  L  G  K  K  I  N  Y  I  N  H  E  C  Q  N  K  K  E  N  Y  N  L  T  L  N  C  H  S  K  R  T  A  L  K  P  S  H  I  V  L  M  G  *  S  K  N  *  G  I  K  *  *  *  R  N  P  *  N  Y  Q  N  I  N  E  L  N  Q  P  P  P  S  C  C  P  Q  H  Q  L  Q  D  P  P  M  L  A  C  Q  H  Q  H  L  R  F  P  H  Q  C  S  N  R  V  S  T  S  C  E  F  C  C  Q  R  C  L  A  P  R  G  *  N  L  R  *  E  G  Q  S  Q  K  A  R  E  P  S  P  S  Q  T  C  H  S  C  L  H  Q  P  S  S  L  A  H  P  *  W  S  S  L  G  *  S  P  W  S  S  C  *  T  C  I  Q  P  C  W  S  P  *  V  P  V  P  S  *  F  S  P  C  *  Q  S  S  H  T  H  Q  *  P  N  S  R  E  S  Q  Q  H  G  Q  K  Q  *  P  F  Q  L  C  L  L  A  H  P  S  S  P  Y  T  V  P  Q  T  S  P  S  I  L  P  A  F  S  S  H  L  H  S  H  Q  A  *  G  L  P  W  *  Q  K  Q  A  F  C  P  Q  I  P  S  A  D  Q  L  N  T  H  Q  W  H  Q  P  C  K  A  P   : Q  Y  P  S  Q  S  S  N  I  Q  E  S  T  H  H  S  </first_frame>
            <second_frame>  K  S  W  A  R  K  *  T  I  S  T  T  N  V  K  T  K  K  R  I  I  T  *  H  *  T  A  I  L  K  E  R  H  *  N  P  H  I  L  F  *  W  D  K  A  K  T  R  E  *  S  S  S  K  G  T  H  K  T  I  K  T  L  M  N  L  I  N  L  L  H  L  A  A  L  S  I  S  F  R  I  L  Q  C  W  H  V  S  I  S  I  S  A  F  L  I  N  A  Q  T  E  F  Q  H  P  V  N  S  V  A  K  G  V  W  L  L  E  A  E  T  *  G  E  K  G  S  L  K  K  Q  E  N  Q  V  L  H  R  L  V  I  L  V  C  I  S  P  L  P  *  L  I  H  D  G  V  L  W  V  D  L  H  G  L  L  A  R  H  V  S  S  H  A  G  V  P  K  C  L  C  L  H  N  S  L  H  V  S  S  P  A  I  L  T  S  D  Q  T  A  G  R  V  N  N  T  V  R  N  N  D  L  F  N  F  V  S  *  H  I  L  H  H  L  T  Q  S  L  K  L  L  L  Q  F  F  L  L  F  L  L  I  F  T  L  I  K  L  E  A  F  L  G  S  R  N  K  L  F  A  L  K  F  L  Q  L  T  N  *  I  L  I  N  G  I  N  H  V  K  H  L  :  N  T  L  H  K  A  Q  I  F  R  N  Q  L  I  T  V </second_frame>
            <third_frame>   R  A  G  Q  E  N  K  L  Y  Q  P  R  M  S  K  Q  K  R  E  L  *  P  N  I  E  L  P  F  *  K  N  G  I  K  T  L  T  Y  C  S  D  G  I  K  Q  K  L  G  N  K  V  V  V  K  E  P  I  K  L  S  K  H  *  *  T  *  S  T  S  S  I  L  L  P  S  A  S  A  S  G  S  S  N  A  G  M  S  A  S  A  S  P  L  S  S  S  M  L  K  P  S  F  N  I  L  *  I  L  L  P  K  V  F  G  S  S  R  L  K  P  E  V  R  R  A  V  S  K  S  K  R  T  K  S  F  T  D  L  S  F  L  S  A  S  A  L  F  L  S  S  S  M  M  E  F  S  G  L  I  S  M  V  F  L  L  D  M  Y  P  A  M  L  E  S  L  S  A  C  A  F  I  I  L  S  M  L  A  V  Q  P  Y  S  P  V  T  K  Q  Q  G  E  S  T  T  R  S  E  T  M  T  F  S  T  L  S  P  S  T  S  F  I  T  L  H  S  P  S  N  F  S  F  N  S  S  C  F  F  F  S  S  S  L  S  S  S  L  R  P  S  L  V  A  E  T  S  F  L  P  S  N  S  F  S  *  P  I  E  Y  S  S  M  A  S  T  M  *  S  T  S :   I  P  F  T  K  L  K  Y  S  G  I  N  S  S  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33201" stop="33671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLPKVFGSSRLKPEVRRAVSKSKRTKSFTDLSFLSASALFLSSSMMEFSGLISMVFLLDMYPAMLESLSACAFIILSMLAVQPYSPVTKQQGESTTRSETMTFSTLSPSTSFITLHSPSNFSFNSSCFFFSSSLSSSLRPSLVAETSFLPSNSFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="32887" e_stop="33493"/>
            <exon e_start="33530" e_stop="34068"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.656" acc_prob="0.000" e_score="0.938"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="32887" e_stop="33493" e_length="607"/>
          </exon>
          <intron i_serial="1" don_prob="0.656" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33494" i_stop="33529" i_length="36"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="33530" e_stop="34068" e_length="539"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32887" stop="33428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32892" stop="33337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32894" stop="33315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32903" stop="33433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32905" stop="33268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32912" stop="33213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32933" stop="33399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33137" stop="33493"/>
              <exon start="33530" stop="34068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737148" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33543" stop="33837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33739" stop="34064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGGGCAAGAAAATAAACTATATCAACCACGAATGTCAAAACAAAAAAGAGAATTATAACCTAACATTGAACTGCCATTCTAAAAGAACGGCATTAAAACCCTCACATATTGTTCTGATGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCCTCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTATCCAGCCATGCTGGAGTCCCTAAGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCAGTGACCAAACAGCAGGGAGAGTCAACAACACG : CACATCCTTCATCACCTTACACAGTCCCTCAAACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATTGAATACTCATCAATGGCATCAACCATGTAAAGCACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTCACATAGTCCTTCAAGCTGGTCATCTCATCACCACTCTTAGTGGAGTGGTACCTCAGCAGTTCAGCAAACTTTGCCCTGTTCTGAGAATCCTCATGGATTCCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCTCTGG</gDNA_template>
            <first_frame> L  G  K  K  I  N  Y  I  N  H  E  C  Q  N  K  K  E  N  Y  N  L  T  L  N  C  H  S  K  R  T  A  L  K  P  S  H  I  V  L  M  G  *  S  K  N  *  G  I  K  *  *  *  R  N  P  *  N  Y  Q  N  I  N  E  L  N  Q  P  P  P  S  C  C  P  Q  H  Q  L  Q  D  P  P  M  L  A  C  Q  H  Q  H  L  R  F  P  H  Q  C  S  N  R  V  S  T  S  C  E  F  C  C  Q  R  C  L  A  P  R  G  *  N  L  R  *  E  G  Q  S  Q  K  A  R  E  P  S  P  S  Q  T  C  H  S  C  L  H  Q  P  S  S  L  A  H  P  *  W  S  S  L  G  *  S  P  W  S  S  C  *  T  C  I  Q  P  C  W  S  P  *  V  P  V  P  S  *  F  S  P  C  *  Q  S  S  H  T  H  Q  *  P  N  S  R  E  S  Q  Q  H   : A  H  P  S  S  P  Y  T  V  P  Q  T  S  P  S  I  L  P  A  F  S  S  H  L  H  S  H  Q  A  *  G  L  P  W  *  Q  K  Q  A  F  C  P  Q  I  P  S  A  D  Q  L  N  T  H  Q  W  H  Q  P  C  K  A  P  H  I  P  S  S  S  V  S  P  G  R  E  S  S  Q  Q  P  S  C  S  H  Q  *  C  S  K  Y  H  S  G  P  P  S  F  W  S  H  S  P  S  S  W  S  S  H  H  H  S  *  W  S  G  T  S  A  V  Q  Q  T  L  P  C  S  E  N  P  H  G  F  Q  A  *  G  F  *  R  T  P  H  R  T  Y  C  S  P  P  C  S  Q  Q  F  Q  R  K  A  Q  H  T  S  S  P  N  S  C  E  *  P  L  G  S  C  S  A  A  M  S  L  W </first_frame>
            <second_frame>  W  A  R  K  *  T  I  S  T  T  N  V  K  T  K  K  R  I  I  T  *  H  *  T  A  I  L  K  E  R  H  *  N  P  H  I  L  F  *  W  D  K  A  K  T  R  E  *  S  S  S  K  G  T  H  K  T  I  K  T  L  M  N  L  I  N  L  L  H  L  A  A  L  S  I  S  F  R  I  L  Q  C  W  H  V  S  I  S  I  S  A  F  L  I  N  A  Q  T  E  F  Q  H  P  V  N  S  V  A  K  G  V  W  L  L  E  A  E  T  *  G  E  K  G  S  L  K  K  Q  E  N  Q  V  L  H  R  L  V  I  L  V  C  I  S  P  L  P  *  L  I  H  D  G  V  L  W  V  D  L  H  G  L  L  A  R  H  V  S  S  H  A  G  V  P  K  C  L  C  L  H  N  S  L  H  V  S  S  P  A  I  L  T  S  D  Q  T  A  G  R  V  N  N  T  :  H  I  L  H  H  L  T  Q  S  L  K  L  L  L  Q  F  F  L  L  F  L  L  I  F  T  L  I  K  L  E  A  F  L  G  S  R  N  K  L  F  A  L  K  F  L  Q  L  T  N  *  I  L  I  N  G  I  N  H  V  K  H  L  I  S  L  L  L  Q  F  L  Q  E  G  R  V  L  N  S  L  L  A  L  T  S  N  V  V  N  I  I  L  A  L  L  H  S  G  H  I  V  L  Q  A  G  H  L  I  T  T  L  S  G  V  V  P  Q  Q  F  S  K  L  C  P  V  L  R  I  L  M  D  S  K  L  E  V  F  R  E  R  L  I  E  L  I  V  V  L  L  V  L  S  N  F  K  E  K  L  N  T  L  L  H  Q  I  L  A  N  N  L  *  D  L  V  L  L  Q  C  L  S   </second_frame>
            <third_frame>   G  Q  E  N  K  L  Y  Q  P  R  M  S  K  Q  K  R  E  L  *  P  N  I  E  L  P  F  *  K  N  G  I  K  T  L  T  Y  C  S  D  G  I  K  Q  K  L  G  N  K  V  V  V  K  E  P  I  K  L  S  K  H  *  *  T  *  S  T  S  S  I  L  L  P  S  A  S  A  S  G  S  S  N  A  G  M  S  A  S  A  S  P  L  S  S  S  M  L  K  P  S  F  N  I  L  *  I  L  L  P  K  V  F  G  S  S  R  L  K  P  E  V  R  R  A  V  S  K  S  K  R  T  K  S  F  T  D  L  S  F  L  S  A  S  A  L  F  L  S  S  S  M  M  E  F  S  G  L  I  S  M  V  F  L  L  D  M  Y  P  A  M  L  E  S  L  S  A  C  A  F  I  I  L  S  M  L  A  V  Q  P  Y  S  P  V  T  K  Q  Q  G  E  S  T  T  R :   T  S  F  I  T  L  H  S  P  S  N  F  S  F  N  S  S  C  F  F  F  S  S  S  L  S  S  S  L  R  P  S  L  V  A  E  T  S  F  L  P  S  N  S  F  S  *  P  I  E  Y  S  S  M  A  S  T  M  *  S  T  S  Y  P  F  F  F  S  F  S  R  K  G  E  F  S  T  A  F  L  L  S  P  V  M  *  *  I  S  F  W  P  S  F  I  L  V  T  *  S  F  K  L  V  I  S  S  P  L  L  V  E  W  Y  L  S  S  S  A  N  F  A  L  F  *  E  S  S  W  I  P  S  L  R  F  L  E  N  A  S  *  N  L  L  *  S  S  L  F  S  A  I  S  K  K  S  S  T  H  F  F  T  K  F  L  R  I  T  F  R  I  L  F  C  C  N  V  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33201" stop="33493"/>
                    <exon start="33530" stop="33671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLPKVFGSSRLKPEVRRAVSKSKRTKSFTDLSFLSASALFLSSSMMEFSGLISMVFLLDMYPAMLESLSACAFIILSMLAVQPYSPVTKQQGESTTRTSFITLHSPSNFSFNSSCFFFSSSLSSSLRPSLVAETSFLPSNSFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33680" stop="34039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILINGINHVKHLISLLLQFLQEGRVLNSLLALTSNVVNIILALLHSGHIVLQAGHLITTLSGVVPQQFSKLCPVLRILMDSKLEVFRERLIELIVVLLVLSNFKEKLNTLLHQILANNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="44747" PGL_stop="48409"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44747" e_stop="45156"/>
            <exon e_start="47534" e_stop="47801"/>
            <exon e_start="47895" e_stop="47999"/>
            <exon e_start="48175" e_stop="48409"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.817" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44747" e_stop="45156" e_length="410"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="45157" i_stop="47533" i_length="2377"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47534" e_stop="47801" e_length="268"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.817">
            <gDNA_intron_boundary i_start="47802" i_stop="47894" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47895" e_stop="47999" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.990">
            <gDNA_intron_boundary i_start="48000" i_stop="48174" i_length="175"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48175" e_stop="48409" e_length="235"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44747" stop="45156"/>
              <exon start="47534" stop="47672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44762" stop="45156"/>
              <exon start="47534" stop="47759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44775" stop="45156"/>
              <exon start="47534" stop="47801"/>
              <exon start="47895" stop="47999"/>
              <exon start="48175" stop="48260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44778" stop="45071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44783" stop="45154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270521" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44796" stop="45156"/>
              <exon start="47534" stop="47720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486525" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44796" stop="45156"/>
              <exon start="47534" stop="47674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427356" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44819" stop="45156"/>
              <exon start="47534" stop="47801"/>
              <exon start="47895" stop="47999"/>
              <exon start="48175" stop="48231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47604" stop="47801"/>
              <exon start="47895" stop="47999"/>
              <exon start="48175" stop="48403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286903" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47973" stop="47999"/>
              <exon start="48175" stop="48409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270522" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTACAATAAGTAAGGAACTAGAAACGGAGATTATTGAAGCTGTAGCGGAAAATGAGTTGCCGGTAGGTGGGAAAGCAACAAGCAATTCTGGTCACCGGCGGGGTCTCCGTTTGGATCCGATCCAAATTCTCCATATTCCTCAGTTACTTTAACACTGCGACTGTAGTCGACTCGCCGGACATAGATACACAATGCAGAAGTGGTTTTCAGCGGGCAGCGGCGGCGGAGATGATCGTTATGTTGAGCAACAACAAGCTTCTTCTTCAACTCCTTCTTTGCTGGCTGATTGGAATTCATACGCATCAGCAAAATCATCGGATGAGAGCTCCAGCACTGCGTTCATAGGCAGCTTCGATCTCGAATCCGCTGTTCGTTCCGCTAACGATACCGTTTCTGGCACTTTTAATGT : GGTTTCTAAAGGAGTGAGAGACATTCCAGGGAACTTGCAGTCCGCCACTAGCAATATTCCTTCTGGGAAAGCCCTCATGTATTTTGGTCTATTCATGGCGACTGGAGTCTTCTTCATTTTCATGGCATTCACTTTATTCCTTCCAGTGATAGTATTGGTGCCTCAGAAATTTGCCATTTGCTTTACTCTTGGATGTTCGTTTATCATTGGGTCATTCTTCGCACTCAAGGGCCCGAAGACTCAGTTTGCTCATATGTTCTCAATGGAG : AGACTCCCTTTTACGCTAGGTTTCATGGGTAGCATGATTGGCACTCTCTACGTTTCCATGGCACTCCATAGCTATATCCTTTCGGTGCTCTTCTCTGTGATTCAG : GTTCTGGCATTAGCATACTACGCAATATCTTACTTTCCCGGTGGCTCTGCTGGCTTGAAATTTCTGTCGTCTTCTATGATTTCTTCAGTGTTGAAATGCTTTGGCAGGTGAAGGCTTGTAACGCGACTGTGTCAACTTTCTGCAACATTATTGTTCATTAGTATACATTCTGTAGTTGTAGTCTTGTATTCTGAAACTATGGTGTACAATTTTGACAAAATTTAGTTAAGTTCTC</gDNA_template>
            <first_frame> I  T  I  S  K  E  L  E  T  E  I  I  E  A  V  A  E  N  E  L  P  V  G  G  K  A  T  S  N  S  G  H  R  R  G  L  R  L  D  P  I  Q  I  L  H  I  P  Q  L  L  *  H  C  D  C  S  R  L  A  G  H  R  Y  T  M  Q  K  W  F  S  A  G  S  G  G  G  D  D  R  Y  V  E  Q  Q  Q  A  S  S  S  T  P  S  L  L  A  D  W  N  S  Y  A  S  A  K  S  S  D  E  S  S  S  T  A  F  I  G  S  F  D  L  E  S  A  V  R  S  A  N  D  T  V  S  G  T  F  N  V :   V  S  K  G  V  R  D  I  P  G  N  L  Q  S  A  T  S  N  I  P  S  G  K  A  L  M  Y  F  G  L  F  M  A  T  G  V  F  F  I  F  M  A  F  T  L  F  L  P  V  I  V  L  V  P  Q  K  F  A  I  C  F  T  L  G  C  S  F  I  I  G  S  F  F  A  L  K  G  P  K  T  Q  F  A  H  M  F  S  M  E  :  R  L  P  F  T  L  G  F  M  G  S  M  I  G  T  L  Y  V  S  M  A  L  H  S  Y  I  L  S  V  L  F  S  V  I  Q  :  V  L  A  L  A  Y  Y  A  I  S  Y  F  P  G  G  S  A  G  L  K  F  L  S  S  S  M  I  S  S  V  L  K  C  F  G  R  *  R  L  V  T  R  L  C  Q  L  S  A  T  L  L  F  I  S  I  H  S  V  V  V  V  L  Y  S  E  T  M  V  Y  N  F  D  K  I  *  L  S  S  </first_frame>
            <second_frame>  L  Q  *  V  R  N  *  K  R  R  L  L  K  L  *  R  K  M  S  C  R  *  V  G  K  Q  Q  A  I  L  V  T  G  G  V  S  V  W  I  R  S  K  F  S  I  F  L  S  Y  F  N  T  A  T  V  V  D  S  P  D  I  D  T  Q  C  R  S  G  F  Q  R  A  A  A  A  E  M  I  V  M  L  S  N  N  K  L  L  L  Q  L  L  L  C  W  L  I  G  I  H  T  H  Q  Q  N  H  R  M  R  A  P  A  L  R  S  *  A  A  S  I  S  N  P  L  F  V  P  L  T  I  P  F  L  A  L  L  M   : W  F  L  K  E  *  E  T  F  Q  G  T  C  S  P  P  L  A  I  F  L  L  G  K  P  S  C  I  L  V  Y  S  W  R  L  E  S  S  S  F  S  W  H  S  L  Y  S  F  Q  *  *  Y  W  C  L  R  N  L  P  F  A  L  L  L  D  V  R  L  S  L  G  H  S  S  H  S  R  A  R  R  L  S  L  L  I  C  S  Q  W  R :   D  S  L  L  R  *  V  S  W  V  A  *  L  A  L  S  T  F  P  W  H  S  I  A  I  S  F  R  C  S  S  L  *  F  R :   F  W  H  *  H  T  T  Q  Y  L  T  F  P  V  A  L  L  A  *  N  F  C  R  L  L  *  F  L  Q  C  *  N  A  L  A  G  E  G  L  *  R  D  C  V  N  F  L  Q  H  Y  C  S  L  V  Y  I  L  *  L  *  S  C  I  L  K  L  W  C  T  I  L  T  K  F  S  *  V  L </second_frame>
            <third_frame>   Y  N  K  *  G  T  R  N  G  D  Y  *  S  C  S  G  K  *  V  A  G  R  W  E  S  N  K  Q  F  W  S  P  A  G  S  P  F  G  S  D  P  N  S  P  Y  S  S  V  T  L  T  L  R  L  *  S  T  R  R  T  *  I  H  N  A  E  V  V  F  S  G  Q  R  R  R  R  *  S  L  C  *  A  T  T  S  F  F  F  N  S  F  F  A  G  *  L  E  F  I  R  I  S  K  I  I  G  *  E  L  Q  H  C  V  H  R  Q  L  R  S  R  I  R  C  S  F  R  *  R  Y  R  F  W  H  F  *  C  :  G  F  *  R  S  E  R  H  S  R  E  L  A  V  R  H  *  Q  Y  S  F  W  E  S  P  H  V  F  W  S  I  H  G  D  W  S  L  L  H  F  H  G  I  H  F  I  P  S  S  D  S  I  G  A  S  E  I  C  H  L  L  Y  S  W  M  F  V  Y  H  W  V  I  L  R  T  Q  G  P  E  D  S  V  C  S  Y  V  L  N  G   : E  T  P  F  Y  A  R  F  H  G  *  H  D  W  H  S  L  R  F  H  G  T  P  *  L  Y  P  F  G  A  L  L  C  D  S   : G  S  G  I  S  I  L  R  N  I  L  L  S  R  W  L  C  W  L  E  I  S  V  V  F  Y  D  F  F  S  V  E  M  L  W  Q  V  K  A  C  N  A  T  V  S  T  F  C  N  I  I  V  H  *  Y  T  F  C  S  C  S  L  V  F  *  N  Y  G  V  Q  F  *  Q  N  L  V  K  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44900" stop="45156"/>
                    <exon start="47534" stop="47801"/>
                    <exon start="47895" stop="47999"/>
                    <exon start="48175" stop="48285"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HCDCSRLAGHRYTMQKWFSAGSGGGDDRYVEQQQASSSTPSLLADWNSYASAKSSDESSSTAFIGSFDLESAVRSANDTVSGTFNVVSKGVRDIPGNLQSATSNIPSGKALMYFGLFMATGVFFIFMAFTLFLPVIVLVPQKFAICFTLGCSFIIGSFFALKGPKTQFAHMFSMERLPFTLGFMGSMIGTLYVSMALHSYILSVLFSVIQVLALAYYAISYFPGGSAGLKFLSSSMISSVLKCFGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="56844" PGL_stop="57717"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56844" e_stop="57717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="56844" e_stop="57717" e_length="874"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56844" stop="57717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701388" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAATTTAGACGTTCTCACGAACCTTCAAAACCTTGTTTCACTCAACATATCATTCAATGACTTCTATGGAAAACTTCCCAATTCTCCATTCTTTCATAAGCTTCCTTTGAGTGATCTTACTGGAAACCAAGCTCTATACATTTCTGGTGGGGACGTGATCCAAACGGGGCCTGCTGGACATGCCAAAACCACCATGAAGCTTGCTATGTCAATCCTAGTCAGTATAAGTGCTGTGCTGGTTCTGCTAGCCATCTACACGTTGATCAGGATGAGAATGGCCGCAAAGTATGGACCAGAAGTTGATACATGGGAAATGACTCTTTACCAGAAGTTGGACTTTTCAATAGATGACATTGTTCATAATCTAACGTCAGCTAATGTCATTGGCACTGGGAGCTCTGGGGTTGTATACAGAATAATGACCGAAAATGGGGTGACTTTAGCAGTCAAGAAAATGTGGTCATCAGAGAAATCAGGAGCATTTGGTTCAGAAATTCAAACACTTGGTTCAATCCGGCACAAGAACATCGTACGCCTTCTCGGCTGGGCTTCAAACCAGAACATGAAGCTTCTGTTCTATGACTACCTTCCCAATGGGAGTTTGAGCTCATTACTCCATGGTGTTGGCAAAGGAGCAGCAGAATGGGAAAACAGATTTGATGTAGTCCTTGGAGTAGCCCATGCACTTGCATACTTGCATCATGACTGTGTACCCCCTATAATGCATGGAGATGTCAAAGCAATGAATGTATTGTTAGGCTCTAGAATGGAGCCTTACCTGGCCGATTTCGGGTTGGCAAGGATTGTCAACACTGATGTTGATGCAGACTTGTTAAAGGAGAGTCAAAGGCCTCATCTTGCTGGTTCTTATGG</gDNA_template>
            <first_frame> G  I  *  T  F  S  R  T  F  K  T  L  F  H  S  T  Y  H  S  M  T  S  M  E  N  F  P  I  L  H  S  F  I  S  F  L  *  V  I  L  L  E  T  K  L  Y  T  F  L  V  G  T  *  S  K  R  G  L  L  D  M  P  K  P  P  *  S  L  L  C  Q  S  *  S  V  *  V  L  C  W  F  C  *  P  S  T  R  *  S  G  *  E  W  P  Q  S  M  D  Q  K  L  I  H  G  K  *  L  F  T  R  S  W  T  F  Q  *  M  T  L  F  I  I  *  R  Q  L  M  S  L  A  L  G  A  L  G  L  Y  T  E  *  *  P  K  M  G  *  L  *  Q  S  R  K  C  G  H  Q  R  N  Q  E  H  L  V  Q  K  F  K  H  L  V  Q  S  G  T  R  T  S  Y  A  F  S  A  G  L  Q  T  R  T  *  S  F  C  S  M  T  T  F  P  M  G  V  *  A  H  Y  S  M  V  L  A  K  E  Q  Q  N  G  K  T  D  L  M  *  S  L  E  *  P  M  H  L  H  T  C  I  M  T  V  Y  P  L  *  C  M  E  M  S  K  Q  *  M  Y  C  *  A  L  E  W  S  L  T  W  P  I  S  G  W  Q  G  L  S  T  L  M  L  M  Q  T  C  *  R  R  V  K  G  L  I  L  L  V  L  M  </first_frame>
            <second_frame>  E  F  R  R  S  H  E  P  S  K  P  C  F  T  Q  H  I  I  Q  *  L  L  W  K  T  S  Q  F  S  I  L  S  *  A  S  F  E  *  S  Y  W  K  P  S  S  I  H  F  W  W  G  R  D  P  N  G  A  C  W  T  C  Q  N  H  H  E  A  C  Y  V  N  P  S  Q  Y  K  C  C  A  G  S  A  S  H  L  H  V  D  Q  D  E  N  G  R  K  V  W  T  R  S  *  Y  M  G  N  D  S  L  P  E  V  G  L  F  N  R  *  H  C  S  *  S  N  V  S  *  C  H  W  H  W  E  L  W  G  C  I  Q  N  N  D  R  K  W  G  D  F  S  S  Q  E  N  V  V  I  R  E  I  R  S  I  W  F  R  N  S  N  T  W  F  N  P  A  Q  E  H  R  T  P  S  R  L  G  F  K  P  E  H  E  A  S  V  L  *  L  P  S  Q  W  E  F  E  L  I  T  P  W  C  W  Q  R  S  S  R  M  G  K  Q  I  *  C  S  P  W  S  S  P  C  T  C  I  L  A  S  *  L  C  T  P  Y  N  A  W  R  C  Q  S  N  E  C  I  V  R  L  *  N  G  A  L  P  G  R  F  R  V  G  K  D  C  Q  H  *  C  *  C  R  L  V  K  G  E  S  K  A  S  S  C  W  F  L  W </second_frame>
            <third_frame>   N  L  D  V  L  T  N  L  Q  N  L  V  S  L  N  I  S  F  N  D  F  Y  G  K  L  P  N  S  P  F  F  H  K  L  P  L  S  D  L  T  G  N  Q  A  L  Y  I  S  G  G  D  V  I  Q  T  G  P  A  G  H  A  K  T  T  M  K  L  A  M  S  I  L  V  S  I  S  A  V  L  V  L  L  A  I  Y  T  L  I  R  M  R  M  A  A  K  Y  G  P  E  V  D  T  W  E  M  T  L  Y  Q  K  L  D  F  S  I  D  D  I  V  H  N  L  T  S  A  N  V  I  G  T  G  S  S  G  V  V  Y  R  I  M  T  E  N  G  V  T  L  A  V  K  K  M  W  S  S  E  K  S  G  A  F  G  S  E  I  Q  T  L  G  S  I  R  H  K  N  I  V  R  L  L  G  W  A  S  N  Q  N  M  K  L  L  F  Y  D  Y  L  P  N  G  S  L  S  S  L  L  H  G  V  G  K  G  A  A  E  W  E  N  R  F  D  V  V  L  G  V  A  H  A  L  A  Y  L  H  H  D  C  V  P  P  I  M  H  G  D  V  K  A  M  N  V  L  L  G  S  R  M  E  P  Y  L  A  D  F  G  L  A  R  I  V  N  T  D  V  D  A  D  L  L  K  E  S  Q  R  P  H  L  A  G  S  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56846" stop="57715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>870</number_coding_nucleotides>
                  <number_encoded_amino_acids>290</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLDVLTNLQNLVSLNISFNDFYGKLPNSPFFHKLPLSDLTGNQALYISGGDVIQTGPAGHAKTTMKLAMSILVSISAVLVLLAIYTLIRMRMAAKYGPEVDTWEMTLYQKLDFSIDDIVHNLTSANVIGTGSSGVVYRIMTENGVTLAVKKMWSSEKSGAFGSEIQTLGSIRHKNIVRLLGWASNQNMKLLFYDYLPNGSLSSLLHGVGKGAAEWENRFDVVLGVAHALAYLHHDCVPPIMHGDVKAMNVLLGSRMEPYLADFGLARIVNTDVDADLLKESQRPHLAGSY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="62949" PGL_stop="59499"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62949" e_stop="62907"/>
            <exon e_start="61801" e_stop="61515"/>
            <exon e_start="61426" e_stop="61318"/>
            <exon e_start="60987" e_stop="60895"/>
            <exon e_start="60595" e_stop="60508"/>
            <exon e_start="60097" e_stop="59499"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.694" acc_prob="0.742" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62949" e_stop="62907" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.997">
            <gDNA_intron_boundary i_start="62906" i_stop="61802" i_length="1105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61801" e_stop="61515" e_length="287"/>
          </exon>
          <intron i_serial="2" don_prob="0.694" acc_prob="0.742">
            <gDNA_intron_boundary i_start="61514" i_stop="61427" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61426" e_stop="61318" e_length="109"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.962">
            <gDNA_intron_boundary i_start="61317" i_stop="60988" i_length="330"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60987" e_stop="60895" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.986">
            <gDNA_intron_boundary i_start="60894" i_stop="60596" i_length="299"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60595" e_stop="60508" e_length="88"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60507" i_stop="60098" i_length="410"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="60097" e_stop="59499" e_length="599"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62949" stop="62907"/>
              <exon start="61801" stop="61515"/>
              <exon start="61426" stop="61318"/>
              <exon start="60987" stop="60895"/>
              <exon start="60595" stop="60508"/>
              <exon start="60097" stop="59988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60051" stop="59499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269551" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTCAATCCTGTTTCATTCTAGAGCCATTATCATCCCCTG : GGTGCAGAAGTTCAGTGCCATAAGCTGCTCCCGAGGCAGAGATTATAGCGCTTTTCCAGTCAGGCACATCCCCAAGAGATCTAATGAAAGCCAAGAGTCAGAATCTGCTTTGCCAAAGAAGCACTTTTTGGACATCGAAAAAAACAGCTTCTTAAACAGGAAAGTTCAGGAAACTGAATTTTCTGTCGGTGGTGGAGGGTCGAAGTACGGAGATATACCTTTTCATTCCAAGTCTCGAAATCATAAGCAAAAGCTTATCACCAGCTTAGATGATGAGGTTGAATGGG : GGAAGGAAGATGAAGTTGATGAAGATTTTGTACTTGAACATGGTATAGCTGAAACTGATAAAGCTAGGCAAGATGCTGAGACAATCGCAGTTCGATTACTTGCTTCAAG : AGCACTTACGGCTGTAGAACTGCAGAAGAAGCTCATGGGAAGAAAGTTTACAGTCAATGTTGTTAATGCTGTAATAACAGATTTCCATACCAG : GGGTTTAATCAATGACGGTCTGTATGCTGAAATGTTTTCTCGGTCCAGATGGTCTTCCTCAAGTTGGGGTCCACGACGAATCAAGCAA : GCCTTGATCAAGAAGGGTGTAAGTGAAGTGGATGCAGACAATGCCATAAAATTGGTCTTCAAGAATGACGAAGCTGGTGAAGAGCAAGAATCAAGAGAATCAGGACATGCTATATCAAAACCGTCTCTGGATCAATTATATGTCCAGGCATCTAAACAGTGGCTTAAAGGGCAAGATATGCCTAGAGAAAAACGTAAAGCAAGGATTATTCGTTGGCTTCAGTATCGTGGCTTTGATTGGAGCGTGGTTAGTTTCATACTTAAGAAGTTAGAATCCAGCCATCCTCAATAGAGTCCCTTTACTCAGCGAAAGGGATTATAATGATCTGTTTGATGTTGCCTTAACTCGATGAGGTAGACGAGCTCTTCCTACTGTAAAATGGCCCTTAGTGGAAGTACAAGGAACTGTGTCAATTATTCGGTCTATTTTTGCCATCTCAAAAATAGTTTTCAAGTGTTAAGATCAATACAGAAGGCAAGAAGTCAAGAGCCCTAAAGTCTTTTTGTATCAGGAAGTGAGCAGTTTCACTGGAAGTAAATTGTACTGTATTTTGCCACATTAACCAGATTGTAAATAAGAATGTTCCCATTTTTAACTTT</gDNA_template>
            <first_frame> K  L  Q  S  C  F  I  L  E  P  L  S  S  P   : G  C  R  S  S  V  P  *  A  A  P  E  A  E  I  I  A  L  F  Q  S  G  T  S  P  R  D  L  M  K  A  K  S  Q  N  L  L  C  Q  R  S  T  F  W  T  S  K  K  T  A  S  *  T  G  K  F  R  K  L  N  F  L  S  V  V  E  G  R  S  T  E  I  Y  L  F  I  P  S  L  E  I  I  S  K  S  L  S  P  A  *  M  M  R  L  N  G  :  G  R  K  M  K  L  M  K  I  L  Y  L  N  M  V  *  L  K  L  I  K  L  G  K  M  L  R  Q  S  Q  F  D  Y  L  L  Q   : E  H  L  R  L  *  N  C  R  R  S  S  W  E  E  S  L  Q  S  M  L  L  M  L  *  *  Q  I  S  I  P   : G  V  *  S  M  T  V  C  M  L  K  C  F  L  G  P  D  G  L  P  Q  V  G  V  H  D  E  S  S  K :   P  *  S  R  R  V  *  V  K  W  M  Q  T  M  P  *  N  W  S  S  R  M  T  K  L  V  K  S  K  N  Q  E  N  Q  D  M  L  Y  Q  N  R  L  W  I  N  Y  M  S  R  H  L  N  S  G  L  K  G  K  I  C  L  E  K  N  V  K  Q  G  L  F  V  G  F  S  I  V  A  L  I  G  A  W  L  V  S  Y  L  R  S  *  N  P  A  I  L  N  R  V  P  L  L  S  E  R  D  Y  N  D  L  F  D  V  A  L  T  R  *  G  R  R  A  L  P  T  V  K  W  P  L  V  E  V  Q  G  T  V  S  I  I  R  S  I  F  A  I  S  K  I  V  F  K  C  *  D  Q  Y  R  R  Q  E  V  K  S  P  K  V  F  L  Y  Q  E  V  S  S  F  T  G  S  K  L  Y  C  I  L  P  H  *  P  D  C  K  *  E  C  S  H  F  *  L  </first_frame>
            <second_frame>  S  F  N  P  V  S  F  *  S  H  Y  H  P  L  :  G  A  E  V  Q  C  H  K  L  L  P  R  Q  R  L  *  R  F  S  S  Q  A  H  P  Q  E  I  *  *  K  P  R  V  R  I  C  F  A  K  E  A  L  F  G  H  R  K  K  Q  L  L  K  Q  E  S  S  G  N  *  I  F  C  R  W  W  R  V  E  V  R  R  Y  T  F  S  F  Q  V  S  K  S  *  A  K  A  Y  H  Q  L  R  *  *  G  *  M  G :   E  G  R  *  S  *  *  R  F  C  T  *  T  W  Y  S  *  N  *  *  S  *  A  R  C  *  D  N  R  S  S  I  T  C  F  K  :  S  T  Y  G  C  R  T  A  E  E  A  H  G  K  K  V  Y  S  Q  C  C  *  C  C  N  N  R  F  P  Y  Q  :  G  F  N  Q  *  R  S  V  C  *  N  V  F  S  V  Q  M  V  F  L  K  L  G  S  T  T  N  Q  A   : S  L  D  Q  E  G  C  K  *  S  G  C  R  Q  C  H  K  I  G  L  Q  E  *  R  S  W  *  R  A  R  I  K  R  I  R  T  C  Y  I  K  T  V  S  G  S  I  I  C  P  G  I  *  T  V  A  *  R  A  R  Y  A  *  R  K  T  *  S  K  D  Y  S  L  A  S  V  S  W  L  *  L  E  R  G  *  F  H  T  *  E  V  R  I  Q  P  S  S  I  E  S  L  Y  S  A  K  G  I  I  M  I  C  L  M  L  P  *  L  D  E  V  D  E  L  F  L  L  *  N  G  P  *  W  K  Y  K  E  L  C  Q  L  F  G  L  F  L  P  S  Q  K  *  F  S  S  V  K  I  N  T  E  G  K  K  S  R  A  L  K  S  F  C  I  R  K  *  A  V  S  L  E  V  N  C  T  V  F  C  H  I  N  Q  I  V  N  K  N  V  P  I  F  N  F </second_frame>
            <third_frame>   A  S  I  L  F  H  S  R  A  I  I  I  P  W :   V  Q  K  F  S  A  I  S  C  S  R  G  R  D  Y  S  A  F  P  V  R  H  I  P  K  R  S  N  E  S  Q  E  S  E  S  A  L  P  K  K  H  F  L  D  I  E  K  N  S  F  L  N  R  K  V  Q  E  T  E  F  S  V  G  G  G  G  S  K  Y  G  D  I  P  F  H  S  K  S  R  N  H  K  Q  K  L  I  T  S  L  D  D  E  V  E  W   : G  K  E  D  E  V  D  E  D  F  V  L  E  H  G  I  A  E  T  D  K  A  R  Q  D  A  E  T  I  A  V  R  L  L  A  S  R :   A  L  T  A  V  E  L  Q  K  K  L  M  G  R  K  F  T  V  N  V  V  N  A  V  I  T  D  F  H  T  R :   G  L  I  N  D  G  L  Y  A  E  M  F  S  R  S  R  W  S  S  S  S  W  G  P  R  R  I  K  Q  :  A  L  I  K  K  G  V  S  E  V  D  A  D  N  A  I  K  L  V  F  K  N  D  E  A  G  E  E  Q  E  S  R  E  S  G  H  A  I  S  K  P  S  L  D  Q  L  Y  V  Q  A  S  K  Q  W  L  K  G  Q  D  M  P  R  E  K  R  K  A  R  I  I  R  W  L  Q  Y  R  G  F  D  W  S  V  V  S  F  I  L  K  K  L  E  S  S  H  P  Q  *  S  P  F  T  Q  R  K  G  L  *  *  S  V  *  C  C  L  N  S  M  R  *  T  S  S  S  Y  C  K  M  A  L  S  G  S  T  R  N  C  V  N  Y  S  V  Y  F  C  H  L  K  N  S  F  Q  V  L  R  S  I  Q  K  A  R  S  Q  E  P  *  S  L  F  V  S  G  S  E  Q  F  H  W  K  *  I  V  L  Y  F  A  T  L  T  R  L  *  I  R  M  F  P  F  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62947" stop="62907"/>
                    <exon start="61801" stop="61515"/>
                    <exon start="61426" stop="61318"/>
                    <exon start="60987" stop="60895"/>
                    <exon start="60595" stop="60508"/>
                    <exon start="60097" stop="59807"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>906</number_coding_nucleotides>
                  <number_encoded_amino_acids>302</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASILFHSRAIIIPWVQKFSAISCSRGRDYSAFPVRHIPKRSNESQESESALPKKHFLDIEKNSFLNRKVQETEFSVGGGGSKYGDIPFHSKSRNHKQKLITSLDDEVEWGKEDEVDEDFVLEHGIAETDKARQDAETIAVRLLASRALTAVELQKKLMGRKFTVNVVNAVITDFHTRGLINDGLYAEMFSRSRWSSSSWGPRRIKQALIKKGVSEVDADNAIKLVFKNDEAGEEQESRESGHAISKPSLDQLYVQASKQWLKGQDMPREKRKARIIRWLQYRGFDWSVVSFILKKLESSHPQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="65997" PGL_stop="65110"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65997" e_stop="65989"/>
            <exon e_start="65908" e_stop="65655"/>
            <exon e_start="65472" e_stop="65309"/>
            <exon e_start="65220" e_stop="65110"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.558" acc_prob="0.999" e_score="0.984"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="0.976"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65997" e_stop="65989" e_length="9"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.991">
            <gDNA_intron_boundary i_start="65988" i_stop="65909" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="65908" e_stop="65655" e_length="254"/>
          </exon>
          <intron i_serial="2" don_prob="0.558" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65654" i_stop="65473" i_length="182"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="65472" e_stop="65309" e_length="164"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="65308" i_stop="65221" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="0.973">
            <gDNA_exon_boundary e_start="65220" e_stop="65110" e_length="111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65997" stop="65989"/>
              <exon start="65908" stop="65655"/>
              <exon start="65472" stop="65309"/>
              <exon start="65220" stop="65110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTCACAG : TATTCTGACAGTTCATGTTCGAGGAAGAGAGCTGGTATCTGGATCTACATTAAAGGGCTGCCTTCACCTTGTGGATTTAGCTGGAAGTGAGAGAGTAGATAAATCTGAAGCTGTTGGCGAGAGACTAAAGGAGGCGCAACATATAAACAAATCTTTGTCAGCATTAGGAGATGTTATCTCTGCTCTTGCCCAAAAGAGCTCACATATTCCTTATAGAAACAGCAAGCTTACTCAAGTATTACAAGACTCATTAG : GTGGTCAGGCAAAGACGTTGATGTTTGTGCACATAAATCCAGAGGCAGATGCATTTGGAGAAACAGTTAGCACCCTCAAGTTTGCTGAGAGGGTTGCTTCCATAGATCTTGGCGCAGCTCGCTCTAACAAAGAAACTGGTGAAATTCGAGACATGAAAGAAGAG : ATCTCAAACCTTAAGCAAGTGCTGGAGAAGAAGGAAACTGAACTTGAACTCCTAAAAAGTGGTGTAAATGTTCGAGGGCAAGCATCACCTCTACGAACAATGAGGCACATT</gDNA_template>
            <first_frame> V  S  Q  :  Y  S  D  S  S  C  S  R  K  R  A  G  I  W  I  Y  I  K  G  L  P  S  P  C  G  F  S  W  K  *  E  S  R  *  I  *  S  C  W  R  E  T  K  G  G  A  T  Y  K  Q  I  F  V  S  I  R  R  C  Y  L  C  S  C  P  K  E  L  T  Y  S  L  *  K  Q  Q  A  Y  S  S  I  T  R  L  I  R :   W  S  G  K  D  V  D  V  C  A  H  K  S  R  G  R  C  I  W  R  N  S  *  H  P  Q  V  C  *  E  G  C  F  H  R  S  W  R  S  S  L  *  Q  R  N  W  *  N  S  R  H  E  R  R   : D  L  K  P  *  A  S  A  G  E  E  G  N  *  T  *  T  P  K  K  W  C  K  C  S  R  A  S  I  T  S  T  N  N  E  A  H  </first_frame>
            <second_frame>  S  H  S :   I  L  T  V  H  V  R  G  R  E  L  V  S  G  S  T  L  K  G  C  L  H  L  V  D  L  A  G  S  E  R  V  D  K  S  E  A  V  G  E  R  L  K  E  A  Q  H  I  N  K  S  L  S  A  L  G  D  V  I  S  A  L  A  Q  K  S  S  H  I  P  Y  R  N  S  K  L  T  Q  V  L  Q  D  S  L   : G  G  Q  A  K  T  L  M  F  V  H  I  N  P  E  A  D  A  F  G  E  T  V  S  T  L  K  F  A  E  R  V  A  S  I  D  L  G  A  A  R  S  N  K  E  T  G  E  I  R  D  M  K  E  E  :  I  S  N  L  K  Q  V  L  E  K  K  E  T  E  L  E  L  L  K  S  G  V  N  V  R  G  Q  A  S  P  L  R  T  M  R  H  I </second_frame>
            <third_frame>   L  T   : V  F  *  Q  F  M  F  E  E  E  S  W  Y  L  D  L  H  *  R  A  A  F  T  L  W  I  *  L  E  V  R  E  *  I  N  L  K  L  L  A  R  D  *  R  R  R  N  I  *  T  N  L  C  Q  H  *  E  M  L  S  L  L  L  P  K  R  A  H  I  F  L  I  E  T  A  S  L  L  K  Y  Y  K  T  H  *  :  V  V  R  Q  R  R  *  C  L  C  T  *  I  Q  R  Q  M  H  L  E  K  Q  L  A  P  S  S  L  L  R  G  L  L  P  *  I  L  A  Q  L  A  L  T  K  K  L  V  K  F  E  T  *  K  K  R :   S  Q  T  L  S  K  C  W  R  R  R  K  L  N  L  N  S  *  K  V  V  *  M  F  E  G  K  H  H  L  Y  E  Q  *  G  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65996" stop="65989"/>
                    <exon start="65908" stop="65655"/>
                    <exon start="65472" stop="65309"/>
                    <exon start="65220" stop="65110"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHSILTVHVRGRELVSGSTLKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSSHIPYRNSKLTQVLQDSLGGQAKTLMFVHINPEADAFGETVSTLKFAERVASIDLGAARSNKETGEIRDMKEEISNLKQVLEKKETELELLKSGVNVRGQASPLRTMRHI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="80943" PGL_stop="86787"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80943" e_stop="81053"/>
            <exon e_start="83017" e_stop="83180"/>
            <exon e_start="84029" e_stop="84120"/>
            <exon e_start="84660" e_stop="84729"/>
            <exon e_start="85193" e_stop="85311"/>
            <exon e_start="85647" e_stop="85743"/>
            <exon e_start="86007" e_stop="86086"/>
            <exon e_start="86637" e_stop="86787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.837" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80943" e_stop="81053" e_length="111"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.988">
            <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83017" e_stop="83180" e_length="164"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84029" e_stop="84120" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="0.837" acc_prob="0.989">
            <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84660" e_stop="84729" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="85193" e_stop="85311" e_length="119"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.983">
            <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85647" e_stop="85743" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86007" e_stop="86086" e_length="80"/>
          </exon>
          <intron i_serial="7" don_prob="0.945" acc_prob="0.963">
            <gDNA_intron_boundary i_start="86087" i_stop="86636" i_length="550"/>
          </intron>
          <exon e_serial="8" e_score="0.993">
            <gDNA_exon_boundary e_start="86637" e_stop="86787" e_length="151"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80943" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85743"/>
              <exon start="86007" stop="86086"/>
              <exon start="86637" stop="86701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80947" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80953" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85743"/>
              <exon start="86007" stop="86024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80958" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80960" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80979" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85743"/>
              <exon start="86007" stop="86086"/>
              <exon start="86637" stop="86698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84068" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85743"/>
              <exon start="86007" stop="86086"/>
              <exon start="86637" stop="86787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210462" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCATAAATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG : AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG : GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG : GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG : ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG : GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAG : ATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAG : TACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGATGTTATCATTCCCCGAGGTGGAGACAATCATGTTGCTATCGATTTGATTGTGCAACACATTCGGACAAAACTTGGTCAACATGATCTTT</gDNA_template>
            <first_frame> L  L  I  N  T  H  Y  C  S  L  Y  L  S  F  F  F  S  D  *  F  Q  I  S  N  K  S  S  P  N  L  E  R  T  N  K  L  Q  :  S  L  K  P  T  D  G  F  K  C  S  *  *  F  D  R  S  V  I  R  S  S  L  F  W  V  P  Y  G  A  A  T  Y  S  R  N  *  A  T  N  N  L  Y  R  *  *  F  S  *  A  T  L  H  H  W :   R  C  W  R  C  C  I  W  Q  D  N  S  L  *  F  N  Y  *  A  A  S  *  S  A  S  C  T  S  *  P   : G  F  F  L  S  Y  F  D  S  *  R  T  D  K  S  S  *  V  Q  L  *  P  S  * :   C  I  *  H  R  K  I  V  A  C  G  G  G  I  E  A  G  A  S  S  R  Y  S  K  I  *  F  *  E  L  Q  K  *  R  I  P  S  S  K   : G  Q  S  F  R  C  Y  N  L  G  R  H  T  H  L  S  R  S  T  C  P  R  S  D  E  Y  E  D  I  C  *  Y  R :   C  *  C  T  S  C  E  E  N  K  T  *  H  S  *  K  G  K  R  Y  *  Y  G  A  *  S   : V  L  *  V  C  E  S  C  F  *  *  L  H  S  S  Y  K  E  V  C  *  C  Y  H  S  P  R  W  R  Q  S  C  C  Y  R  F  D  C  A  T  H  S  D  K  T  W  S  T  *  S   </first_frame>
            <second_frame>  F  S  *  I  H  T  T  V  H  C  I  F  L  S  S  S  P  T  N  F  K  S  Q  I  N  L  P  Q  I  *  K  E  Q  T  S  F  R :   A  *  N  Q  Q  M  G  S  N  A  V  D  D  L  I  E  A  S  S  G  V  H  Y  S  G  F  H  M  E  Q  P  R  T  P  E  I  E  Q  P  T  T  S  I  D  D  S  F  H  K  Q  P  F  I  I   : G  V  A  G  G  A  A  S  G  K  T  T  V  C  D  L  I  I  E  Q  L  R  D  Q  R  V  V  L  V  N  Q  :  D  S  F  Y  H  T  L  T  P  E  E  L  T  K  V  H  E  Y  N  F  D  H  P   : D  A  F  D  T  E  K  L  L  R  V  V  E  E  L  K  Q  G  Q  A  V  D  I  P  K  Y  D  F  K  S  Y  K  N  D  V  F  P  L  R  R  :  V  N  P  S  D  V  I  I  L  E  G  I  L  I  F  H  D  P  R  V  R  D  L  M  N  M  K  I  F  V  D  T   : D  A  D  V  R  L  A  R  R  I  R  R  D  T  A  E  K  G  R  D  I  S  M  V  L  D  Q  :  Y  S  K  F  V  K  A  A  F  D  D  F  I  L  P  T  K  K  Y  A  D  V  I  I  P  R  G  G  D  N  H  V  A  I  D  L  I  V  Q  H  I  R  T  K  L  G  Q  H  D  L  </second_frame>
            <third_frame>   S  H  K  Y  T  L  L  F  I  V  S  F  F  L  L  L  R  L  I  S  N  L  K  *  I  F  P  K  F  R  K  N  K  Q  A  S   : E  L  K  T  N  R  W  V  Q  M  Q  L  M  I  *  *  K  R  H  Q  E  F  I  I  L  G  S  I  W  S  S  H  V  L  Q  K  L  S  N  Q  Q  P  L  *  M  I  V  F  I  S  N  P  S  S  L  :  A  L  L  E  V  L  H  L  A  R  Q  Q  F  V  I  *  L  L  S  S  F  V  I  S  E  L  Y  *  L  T  R :   I  L  F  I  I  L  *  L  L  K  N  *  Q  K  F  M  S  T  T  L  T  I  L  :  M  H  L  T  P  K  N  C  C  V  W  W  R  N  *  S  R  G  K  Q  *  I  F  Q  N  M  I  L  R  V  T  K  M  T  Y  S  L  F  E  G :   S  I  L  Q  M  L  *  S  W  K  A  Y  S  S  F  T  I  H  V  S  E  I  *  *  I  *  R  Y  L  L  I  Q  :  M  L  M  Y  V  L  R  G  E  *  D  V  T  Q  L  K  R  E  E  I  L  V  W  C  L  I  S :   T  L  S  L  *  K  L  L  L  M  T  S  F  F  L  Q  R  S  M  L  M  L  S  F  P  E  V  E  T  I  M  L  L  S  I  *  L  C  N  T  F  G  Q  N  L  V  N  M  I  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83024" stop="83180"/>
                    <exon start="84029" stop="84120"/>
                    <exon start="84660" stop="84729"/>
                    <exon start="85193" stop="85311"/>
                    <exon start="85647" stop="85743"/>
                    <exon start="86007" stop="86086"/>
                    <exon start="86637" stop="86786"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>765</number_coding_nucleotides>
                  <number_encoded_amino_acids>255</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQQMGSNAVDDLIEASSGVHYSGFHMEQPRTPEIEQPTTSIDDSFHKQPFIIGVAGGAASGKTTVCDLIIEQLRDQRVVLVNQDSFYHTLTPEELTKVHEYNFDHPDAFDTEKLLRVVEELKQGQAVDIPKYDFKSYKNDVFPLRRVNPSDVIILEGILIFHDPRVRDLMNMKIFVDTDADVRLARRIRRDTAEKGRDISMVLDQYSKFVKAAFDDFILPTKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="80947" e_stop="81053"/>
            <exon e_start="83017" e_stop="83180"/>
            <exon e_start="84029" e_stop="84120"/>
            <exon e_start="84660" e_stop="84729"/>
            <exon e_start="85193" e_stop="85311"/>
            <exon e_start="85647" e_stop="85900"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.837" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80947" e_stop="81053" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.988">
            <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83017" e_stop="83180" e_length="164"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84029" e_stop="84120" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="0.837" acc_prob="0.989">
            <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84660" e_stop="84729" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="85193" e_stop="85311" e_length="119"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.983">
            <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335"/>
          </intron>
          <exon e_serial="6" e_score="0.984">
            <gDNA_exon_boundary e_start="85647" e_stop="85900" e_length="254"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80947" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80958" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80960" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80981" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332497" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATAAATACACACTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG : AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG : GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG : GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG : ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG : GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAGGTTCTTTCATCTCCTTTCTTTTGATGTTCCTTTATTATTGTTGTGGCATGAGTTGTTCCCTCTCATTGACATGTTACCATGATGTACTAGAGAAAAAATTAGCATAATGTCCTAGTAGTCATCTCATATAGTATTCTTTTACTTGGATGTTCTGCTT</gDNA_template>
            <first_frame> S  *  I  H  T  T  V  H  C  I  F  L  S  S  S  P  T  N  F  K  S  Q  I  N  L  P  Q  I  *  K  E  Q  T  S  F  R :   A  *  N  Q  Q  M  G  S  N  A  V  D  D  L  I  E  A  S  S  G  V  H  Y  S  G  F  H  M  E  Q  P  R  T  P  E  I  E  Q  P  T  T  S  I  D  D  S  F  H  K  Q  P  F  I  I   : G  V  A  G  G  A  A  S  G  K  T  T  V  C  D  L  I  I  E  Q  L  R  D  Q  R  V  V  L  V  N  Q  :  D  S  F  Y  H  T  L  T  P  E  E  L  T  K  V  H  E  Y  N  F  D  H  P   : D  A  F  D  T  E  K  L  L  R  V  V  E  E  L  K  Q  G  Q  A  V  D  I  P  K  Y  D  F  K  S  Y  K  N  D  V  F  P  L  R  R  :  V  N  P  S  D  V  I  I  L  E  G  I  L  I  F  H  D  P  R  V  R  D  L  M  N  M  K  I  F  V  D  T  G  S  F  I  S  F  L  L  M  F  L  Y  Y  C  C  G  M  S  C  S  L  S  L  T  C  Y  H  D  V  L  E  K  K  L  A  *  C  P  S  S  H  L  I  *  Y  S  F  T  W  M  F  C   </first_frame>
            <second_frame>  H  K  Y  T  L  L  F  I  V  S  F  F  L  L  L  R  L  I  S  N  L  K  *  I  F  P  K  F  R  K  N  K  Q  A  S   : E  L  K  T  N  R  W  V  Q  M  Q  L  M  I  *  *  K  R  H  Q  E  F  I  I  L  G  S  I  W  S  S  H  V  L  Q  K  L  S  N  Q  Q  P  L  *  M  I  V  F  I  S  N  P  S  S  L  :  A  L  L  E  V  L  H  L  A  R  Q  Q  F  V  I  *  L  L  S  S  F  V  I  S  E  L  Y  *  L  T  R :   I  L  F  I  I  L  *  L  L  K  N  *  Q  K  F  M  S  T  T  L  T  I  L  :  M  H  L  T  P  K  N  C  C  V  W  W  R  N  *  S  R  G  K  Q  *  I  F  Q  N  M  I  L  R  V  T  K  M  T  Y  S  L  F  E  G :   S  I  L  Q  M  L  *  S  W  K  A  Y  S  S  F  T  I  H  V  S  E  I  *  *  I  *  R  Y  L  L  I  Q  V  L  S  S  P  F  F  *  C  S  F  I  I  V  V  A  *  V  V  P  S  H  *  H  V  T  M  M  Y  *  R  K  N  *  H  N  V  L  V  V  I  S  Y  S  I  L  L  L  G  C  S  A  </second_frame>
            <third_frame>   I  N  T  H  Y  C  S  L  Y  L  S  F  F  F  S  D  *  F  Q  I  S  N  K  S  S  P  N  L  E  R  T  N  K  L  Q  :  S  L  K  P  T  D  G  F  K  C  S  *  *  F  D  R  S  V  I  R  S  S  L  F  W  V  P  Y  G  A  A  T  Y  S  R  N  *  A  T  N  N  L  Y  R  *  *  F  S  *  A  T  L  H  H  W :   R  C  W  R  C  C  I  W  Q  D  N  S  L  *  F  N  Y  *  A  A  S  *  S  A  S  C  T  S  *  P   : G  F  F  L  S  Y  F  D  S  *  R  T  D  K  S  S  *  V  Q  L  *  P  S  * :   C  I  *  H  R  K  I  V  A  C  G  G  G  I  E  A  G  A  S  S  R  Y  S  K  I  *  F  *  E  L  Q  K  *  R  I  P  S  S  K   : G  Q  S  F  R  C  Y  N  L  G  R  H  T  H  L  S  R  S  T  C  P  R  S  D  E  Y  E  D  I  C  *  Y  R  F  F  H  L  L  S  F  D  V  P  L  L  L  L  W  H  E  L  F  P  L  I  D  M  L  P  *  C  T  R  E  K  I  S  I  M  S  *  *  S  S  H  I  V  F  F  Y  L  D  V  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83024" stop="83180"/>
                    <exon start="84029" stop="84120"/>
                    <exon start="84660" stop="84729"/>
                    <exon start="85193" stop="85311"/>
                    <exon start="85647" stop="85850"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQQMGSNAVDDLIEASSGVHYSGFHMEQPRTPEIEQPTTSIDDSFHKQPFIIGVAGGAASGKTTVCDLIIEQLRDQRVVLVNQDSFYHTLTPEELTKVHEYNFDHPDAFDTEKLLRVVEELKQGQAVDIPKYDFKSYKNDVFPLRRVNPSDVIILEGILIFHDPRVRDLMNMKIFVDTGSFISFLLMFLYYCCGMSCSLSLTCYHDVLEKKLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="80960" e_stop="81053"/>
            <exon e_start="83017" e_stop="83180"/>
            <exon e_start="84029" e_stop="84120"/>
            <exon e_start="84660" e_stop="84729"/>
            <exon e_start="84794" e_stop="84803"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.837" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.890" e_score="1.000"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80960" e_stop="81053" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.988">
            <gDNA_intron_boundary i_start="81054" i_stop="83016" i_length="1963"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83017" e_stop="83180" e_length="164"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84029" e_stop="84120" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="0.837" acc_prob="0.989">
            <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84660" e_stop="84729" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.890">
            <gDNA_intron_boundary i_start="84730" i_stop="84793" i_length="64"/>
          </intron>
          <exon e_serial="5" e_score="0.600">
            <gDNA_exon_boundary e_start="84794" e_stop="84803" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80960" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80979" stop="81053"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="84794" stop="84803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320035" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACTGTTCATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG : AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG : GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG : GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG : ATAGAAAATG</gDNA_template>
            <first_frame> L  L  F  I  V  S  F  F  L  L  L  R  L  I  S  N  L  K  *  I  F  P  K  F  R  K  N  K  Q  A  S   : E  L  K  T  N  R  W  V  Q  M  Q  L  M  I  *  *  K  R  H  Q  E  F  I  I  L  G  S  I  W  S  S  H  V  L  Q  K  L  S  N  Q  Q  P  L  *  M  I  V  F  I  S  N  P  S  S  L  :  A  L  L  E  V  L  H  L  A  R  Q  Q  F  V  I  *  L  L  S  S  F  V  I  S  E  L  Y  *  L  T  R :   I  L  F  I  I  L  *  L  L  K  N  *  Q  K  F  M  S  T  T  L  T  I  L  :  I  E  N  </first_frame>
            <second_frame>  Y  C  S  L  Y  L  S  F  F  F  S  D  *  F  Q  I  S  N  K  S  S  P  N  L  E  R  T  N  K  L  Q  :  S  L  K  P  T  D  G  F  K  C  S  *  *  F  D  R  S  V  I  R  S  S  L  F  W  V  P  Y  G  A  A  T  Y  S  R  N  *  A  T  N  N  L  Y  R  *  *  F  S  *  A  T  L  H  H  W :   R  C  W  R  C  C  I  W  Q  D  N  S  L  *  F  N  Y  *  A  A  S  *  S  A  S  C  T  S  *  P   : G  F  F  L  S  Y  F  D  S  *  R  T  D  K  S  S  *  V  Q  L  *  P  S  * :   *  K  M </second_frame>
            <third_frame>   T  V  H  C  I  F  L  S  S  S  P  T  N  F  K  S  Q  I  N  L  P  Q  I  *  K  E  Q  T  S  F  R :   A  *  N  Q  Q  M  G  S  N  A  V  D  D  L  I  E  A  S  S  G  V  H  Y  S  G  F  H  M  E  Q  P  R  T  P  E  I  E  Q  P  T  T  S  I  D  D  S  F  H  K  Q  P  F  I  I   : G  V  A  G  G  A  A  S  G  K  T  T  V  C  D  L  I  I  E  Q  L  R  D  Q  R  V  V  L  V  N  Q  :  D  S  F  Y  H  T  L  T  P  E  E  L  T  K  V  H  E  Y  N  F  D  H  P   : D  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83024" stop="83180"/>
                    <exon start="84029" stop="84120"/>
                    <exon start="84660" stop="84729"/>
                    <exon start="84794" stop="84801"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQQMGSNAVDDLIEASSGVHYSGFHMEQPRTPEIEQPTTSIDDSFHKQPFIIGVAGGAASGKTTVCDLIIEQLRDQRVVLVNQDSFYHTLTPEELTKVHEYNFDHPDRK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="80968" e_stop="81053"/>
            <exon e_start="81290" e_stop="81425"/>
            <exon e_start="83017" e_stop="83180"/>
            <exon e_start="84029" e_stop="84120"/>
            <exon e_start="84660" e_stop="84729"/>
            <exon e_start="85193" e_stop="85311"/>
            <exon e_start="85647" e_stop="85743"/>
            <exon e_start="86007" e_stop="86086"/>
            <exon e_start="86637" e_stop="86787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.974" e_score="0.942"/>
          <exon-intron don_prob="0.000" acc_prob="0.988" e_score="0.926"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="0.976"/>
          <exon-intron don_prob="0.837" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="80968" e_stop="81053" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.974">
            <gDNA_intron_boundary i_start="81054" i_stop="81289" i_length="236"/>
          </intron>
          <exon e_serial="2" e_score="0.926">
            <gDNA_exon_boundary e_start="81290" e_stop="81425" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="81426" i_stop="83016" i_length="1591"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="83017" e_stop="83180" e_length="164"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="83181" i_stop="84028" i_length="848"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84029" e_stop="84120" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.837" acc_prob="0.989">
            <gDNA_intron_boundary i_start="84121" i_stop="84659" i_length="539"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="84660" e_stop="84729" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="84730" i_stop="85192" i_length="463"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85193" e_stop="85311" e_length="119"/>
          </exon>
          <intron i_serial="6" don_prob="0.923" acc_prob="0.983">
            <gDNA_intron_boundary i_start="85312" i_stop="85646" i_length="335"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="85647" e_stop="85743" e_length="97"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="85744" i_stop="86006" i_length="263"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="86007" e_stop="86086" e_length="80"/>
          </exon>
          <intron i_serial="8" don_prob="0.945" acc_prob="0.963">
            <gDNA_intron_boundary i_start="86087" i_stop="86636" i_length="550"/>
          </intron>
          <exon e_serial="9" e_score="0.993">
            <gDNA_exon_boundary e_start="86637" e_stop="86787" e_length="151"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80968" stop="81053"/>
              <exon start="81290" stop="81425"/>
              <exon start="83017" stop="83180"/>
              <exon start="84029" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84068" stop="84120"/>
              <exon start="84660" stop="84729"/>
              <exon start="85193" stop="85311"/>
              <exon start="85647" stop="85743"/>
              <exon start="86007" stop="86086"/>
              <exon start="86637" stop="86787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210462" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTGTATCTTTCTTTCTTCTTCTCCGACTAATTTCAAATCTCAAATAAATCTTCCCCAAATTTAGAAAGAACAAACAAGCTTCAG : CTTGGTAACGTCGGGGATGTTTGGTTATGGTGGAGGATCGTGGATGTGTGAGCTGAGGCTGATTGTGAAGTGAGTTATAGTGTGATGTTTTATGAGTTTGAAGTAGGATGAAGCAATGTCATGTATGTCTATTTAG : AGCTTAAAACCAACAGATGGGTTCAAATGCAGTTGATGATTTGATAGAAGCGTCATCAGGAGTTCATTATTCTGGGTTCCATATGGAGCAGCCACGTACTCCAGAAATTGAGCAACCAACAACCTCTATAGATGATAGTTTTCATAAGCAACCCTTCATCATTG : GCGTTGCTGGAGGTGCTGCATCTGGCAAGACAACAGTTTGTGATTTAATTATTGAGCAGCTTCGTGATCAGCGAGTTGTACTAGTTAACCAG : GATTCTTTTTATCATACTTTGACTCCTGAAGAACTGACAAAAGTTCATGAGTACAACTTTGACCATCCTG : ATGCATTTGACACCGAAAAATTGTTGCGTGTGGTGGAGGAATTGAAGCAGGGGCAAGCAGTAGATATTCCAAAATATGATTTTAAGAGTTACAAAAATGACGTATTCCCTCTTCGAAGG : GTCAATCCTTCAGATGTTATAATCTTGGAAGGCATACTCATCTTTCACGATCCACGTGTCCGAGATCTGATGAATATGAAGATATTTGTTGATACAG : ATGCTGATGTACGTCTTGCGAGGAGAATAAGACGTGACACAGCTGAAAAGGGAAGAGATATTAGTATGGTGCTTGATCAG : TACTCTAAGTTTGTGAAAGCTGCTTTTGATGACTTCATTCTTCCTACAAAGAAGTATGCTGATGTTATCATTCCCCGAGGTGGAGACAATCATGTTGCTATCGATTTGATTGTGCAACACATTCGGACAAAACTTGGTCAACATGATCTTT</gDNA_template>
            <first_frame> H  C  I  F  L  S  S  S  P  T  N  F  K  S  Q  I  N  L  P  Q  I  *  K  E  Q  T  S  F  S :   L  V  T  S  G  M  F  G  Y  G  G  G  S  W  M  C  E  L  R  L  I  V  K  *  V  I  V  *  C  F  M  S  L  K  *  D  E  A  M  S  C  M  S  I  *  :  S  L  K  P  T  D  G  F  K  C  S  *  *  F  D  R  S  V  I  R  S  S  L  F  W  V  P  Y  G  A  A  T  Y  S  R  N  *  A  T  N  N  L  Y  R  *  *  F  S  *  A  T  L  H  H  W :   R  C  W  R  C  C  I  W  Q  D  N  S  L  *  F  N  Y  *  A  A  S  *  S  A  S  C  T  S  *  P   : G  F  F  L  S  Y  F  D  S  *  R  T  D  K  S  S  *  V  Q  L  *  P  S  * :   C  I  *  H  R  K  I  V  A  C  G  G  G  I  E  A  G  A  S  S  R  Y  S  K  I  *  F  *  E  L  Q  K  *  R  I  P  S  S  K   : G  Q  S  F  R  C  Y  N  L  G  R  H  T  H  L  S  R  S  T  C  P  R  S  D  E  Y  E  D  I  C  *  Y  R :   C  *  C  T  S  C  E  E  N  K  T  *  H  S  *  K  G  K  R  Y  *  Y  G  A  *  S   : V  L  *  V  C  E  S  C  F  *  *  L  H  S  S  Y  K  E  V  C  *  C  Y  H  S  P  R  W  R  Q  S  C  C  Y  R  F  D  C  A  T  H  S  D  K  T  W  S  T  *  S   </first_frame>
            <second_frame>  I  V  S  F  F  L  L  L  R  L  I  S  N  L  K  *  I  F  P  K  F  R  K  N  K  Q  A  S   : A  W  *  R  R  G  C  L  V  M  V  E  D  R  G  C  V  S  *  G  *  L  *  S  E  L  *  C  D  V  L  *  V  *  S  R  M  K  Q  C  H  V  C  L  F  R :   A  *  N  Q  Q  M  G  S  N  A  V  D  D  L  I  E  A  S  S  G  V  H  Y  S  G  F  H  M  E  Q  P  R  T  P  E  I  E  Q  P  T  T  S  I  D  D  S  F  H  K  Q  P  F  I  I   : G  V  A  G  G  A  A  S  G  K  T  T  V  C  D  L  I  I  E  Q  L  R  D  Q  R  V  V  L  V  N  Q  :  D  S  F  Y  H  T  L  T  P  E  E  L  T  K  V  H  E  Y  N  F  D  H  P   : D  A  F  D  T  E  K  L  L  R  V  V  E  E  L  K  Q  G  Q  A  V  D  I  P  K  Y  D  F  K  S  Y  K  N  D  V  F  P  L  R  R  :  V  N  P  S  D  V  I  I  L  E  G  I  L  I  F  H  D  P  R  V  R  D  L  M  N  M  K  I  F  V  D  T   : D  A  D  V  R  L  A  R  R  I  R  R  D  T  A  E  K  G  R  D  I  S  M  V  L  D  Q  :  Y  S  K  F  V  K  A  A  F  D  D  F  I  L  P  T  K  K  Y  A  D  V  I  I  P  R  G  G  D  N  H  V  A  I  D  L  I  V  Q  H  I  R  T  K  L  G  Q  H  D  L  </second_frame>
            <third_frame>   L  Y  L  S  F  F  F  S  D  *  F  Q  I  S  N  K  S  S  P  N  L  E  R  T  N  K  L  Q  :  L  G  N  V  G  D  V  W  L  W  W  R  I  V  D  V  *  A  E  A  D  C  E  V  S  Y  S  V  M  F  Y  E  F  E  V  G  *  S  N  V  M  Y  V  Y  L   : E  L  K  T  N  R  W  V  Q  M  Q  L  M  I  *  *  K  R  H  Q  E  F  I  I  L  G  S  I  W  S  S  H  V  L  Q  K  L  S  N  Q  Q  P  L  *  M  I  V  F  I  S  N  P  S  S  L  :  A  L  L  E  V  L  H  L  A  R  Q  Q  F  V  I  *  L  L  S  S  F  V  I  S  E  L  Y  *  L  T  R :   I  L  F  I  I  L  *  L  L  K  N  *  Q  K  F  M  S  T  T  L  T  I  L  :  M  H  L  T  P  K  N  C  C  V  W  W  R  N  *  S  R  G  K  Q  *  I  F  Q  N  M  I  L  R  V  T  K  M  T  Y  S  L  F  E  G :   S  I  L  Q  M  L  *  S  W  K  A  Y  S  S  F  T  I  H  V  S  E  I  *  *  I  *  R  Y  L  L  I  Q  :  M  L  M  Y  V  L  R  G  E  *  D  V  T  Q  L  K  R  E  E  I  L  V  W  C  L  I  S :   T  L  S  L  *  K  L  L  L  M  T  S  F  F  L  Q  R  S  M  L  M  L  S  F  P  E  V  E  T  I  M  L  L  S  I  *  L  C  N  T  F  G  Q  N  L  V  N  M  I  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83024" stop="83180"/>
                    <exon start="84029" stop="84120"/>
                    <exon start="84660" stop="84729"/>
                    <exon start="85193" stop="85311"/>
                    <exon start="85647" stop="85743"/>
                    <exon start="86007" stop="86086"/>
                    <exon start="86637" stop="86786"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>765</number_coding_nucleotides>
                  <number_encoded_amino_acids>255</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQQMGSNAVDDLIEASSGVHYSGFHMEQPRTPEIEQPTTSIDDSFHKQPFIIGVAGGAASGKTTVCDLIIEQLRDQRVVLVNQDSFYHTLTPEELTKVHEYNFDHPDAFDTEKLLRVVEELKQGQAVDIPKYDFKSYKNDVFPLRRVNPSDVIILEGILIFHDPRVRDLMNMKIFVDTDADVRLARRIRRDTAEKGRDISMVLDQYSKFVKAAFDDFILPTKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="87188" PGL_stop="89485"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87188" e_stop="87213"/>
            <exon e_start="87960" e_stop="88020"/>
            <exon e_start="88574" e_stop="88667"/>
            <exon e_start="88773" e_stop="89076"/>
            <exon e_start="89194" e_stop="89485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.666" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.995" e_score="0.918"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87188" e_stop="87213" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.666">
            <gDNA_intron_boundary i_start="87214" i_stop="87959" i_length="746"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87960" e_stop="88020" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.886" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88021" i_stop="88573" i_length="553"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88574" e_stop="88667" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="88668" i_stop="88772" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="0.918">
            <gDNA_exon_boundary e_start="88773" e_stop="89076" e_length="304"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="0.995">
            <gDNA_intron_boundary i_start="89077" i_stop="89193" i_length="117"/>
          </intron>
          <exon e_serial="5" e_score="0.935">
            <gDNA_exon_boundary e_start="89194" e_stop="89485" e_length="292"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87188" stop="87213"/>
              <exon start="87960" stop="88020"/>
              <exon start="88574" stop="88667"/>
              <exon start="88773" stop="89076"/>
              <exon start="89194" stop="89293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88843" stop="89076"/>
              <exon start="89194" stop="89485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420726" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAAAGCAGGTGTTGACTCCAACTG : GATCTGTTTACAGTGGTGTTGATTTTTGTAAGAGGTTATGTGGTGTTTCAGTAATTAGAAG : TGGAGAGAGCATGGAGAATGCCTTGCGAGCATGTTGTAAAGGTATCAAGATTGGCAAGATCCTGATCCATCGAGAGGGTGACAACGGTCAGCAG : CTGATCTATGAGAAACTACCACTAGATATTGCAGAAAGACATGTCCTGCTGTTGGATCCCATCCTCGGAACAGGTTAGTTTTTAAGAATGCTCCGGATATCAGATAACTGACCACGAGCTTCATCCACACCTACTGCTGGATGAACTACATCATCAAGATTTTACAATAATTTCTCATCAAAAGCTTACGTGAGCAAAACCTGTAACGTGTACATACACAGGGAATTCTGCTGTTCAAGCTATTTCGTTACTGCTGAAGAAGGGTGTCCCGGAGTCCAACATTTTATTCCTCAATCTCATTTCT : GCACCTCAAGGAGTCCATGTGGTGTGCAAGCGATTTCCAAGAATAAAGATTGTGACATCTGAGATAGAAATTGGCCTGAATGATGATTTTCGTGTTATTCCTGGGATGGGTGAGTTTGGTGATCGATATTTTGGAACAGACGATGACTAAACGAAGAGTTGTGGCCCCCTCCATACCCCGCAATCACATAATGAGAGATGTAACGTTCTATTCCAATTCAATTTTTTTAAAAAGATCTTTTAAAAGAAAAAAAGTAAGATGAGCATATGGTGAAAACACTTGTGTAACGGAC</gDNA_template>
            <first_frame> G  K  A  G  V  D  S  N  W :   I  C  L  Q  W  C  *  F  L  *  E  V  M  W  C  F  S  N  *  K  :  W  R  E  H  G  E  C  L  A  S  M  L  *  R  Y  Q  D  W  Q  D  P  D  P  S  R  G  *  Q  R  S  A   : A  D  L  *  E  T  T  T  R  Y  C  R  K  T  C  P  A  V  G  S  H  P  R  N  R  L  V  F  K  N  A  P  D  I  R  *  L  T  T  S  F  I  H  T  Y  C  W  M  N  Y  I  I  K  I  L  Q  *  F  L  I  K  S  L  R  E  Q  N  L  *  R  V  H  T  Q  G  I  L  L  F  K  L  F  R  Y  C  *  R  R  V  S  R  S  P  T  F  Y  S  S  I  S  F  L :   H  L  K  E  S  M  W  C  A  S  D  F  Q  E  *  R  L  *  H  L  R  *  K  L  A  *  M  M  I  F  V  L  F  L  G  W  V  S  L  V  I  D  I  L  E  Q  T  M  T  K  R  R  V  V  A  P  S  I  P  R  N  H  I  M  R  D  V  T  F  Y  S  N  S  I  F  L  K  R  S  F  K  R  K  K  V  R  *  A  Y  G  E  N  T  C  V  T  D </first_frame>
            <second_frame>  E  K  Q  V  L  T  P  T   : G  S  V  Y  S  G  V  D  F  C  K  R  L  C  G  V  S  V  I  R  S :   G  E  S  M  E  N  A  L  R  A  C  C  K  G  I  K  I  G  K  I  L  I  H  R  E  G  D  N  G  Q  Q  :  L  I  Y  E  K  L  P  L  D  I  A  E  R  H  V  L  L  L  D  P  I  L  G  T  G  *  F  L  R  M  L  R  I  S  D  N  *  P  R  A  S  S  T  P  T  A  G  *  T  T  S  S  R  F  Y  N  N  F  S  S  K  A  Y  V  S  K  T  C  N  V  Y  I  H  R  E  F  C  C  S  S  Y  F  V  T  A  E  E  G  C  P  G  V  Q  H  F  I  P  Q  S  H  F   : C  T  S  R  S  P  C  G  V  Q  A  I  S  K  N  K  D  C  D  I  *  D  R  N  W  P  E  *  *  F  S  C  Y  S  W  D  G  *  V  W  *  S  I  F  W  N  R  R  *  L  N  E  E  L  W  P  P  P  Y  P  A  I  T  *  *  E  M  *  R  S  I  P  I  Q  F  F  *  K  D  L  L  K  E  K  K  *  D  E  H  M  V  K  T  L  V  *  R   </second_frame>
            <third_frame>   K  S  R  C  *  L  Q  L  :  D  L  F  T  V  V  L  I  F  V  R  G  Y  V  V  F  Q  *  L  E   : V  E  R  A  W  R  M  P  C  E  H  V  V  K  V  S  R  L  A  R  S  *  S  I  E  R  V  T  T  V  S  S :   *  S  M  R  N  Y  H  *  I  L  Q  K  D  M  S  C  C  W  I  P  S  S  E  Q  V  S  F  *  E  C  S  G  Y  Q  I  T  D  H  E  L  H  P  H  L  L  L  D  E  L  H  H  Q  D  F  T  I  I  S  H  Q  K  L  T  *  A  K  P  V  T  C  T  Y  T  G  N  S  A  V  Q  A  I  S  L  L  L  K  K  G  V  P  E  S  N  I  L  F  L  N  L  I  S  :  A  P  Q  G  V  H  V  V  C  K  R  F  P  R  I  K  I  V  T  S  E  I  E  I  G  L  N  D  D  F  R  V  I  P  G  M  G  E  F  G  D  R  Y  F  G  T  D  D  D  *  T  K  S  C  G  P  L  H  T  P  Q  S  H  N  E  R  C  N  V  L  F  Q  F  N  F  F  K  K  I  F  *  K  K  K  S  K  M  S  I  W  *  K  H  L  C  N  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88966" stop="89076"/>
                    <exon start="89194" stop="89343"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKPVTCTYTGNSAVQAISLLLKKGVPESNILFLNLISAPQGVHVVCKRFPRIKIVTSEIEIGLNDDFRVIPGMGEFGDRYFGTDDD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87189" stop="87213"/>
                    <exon start="87960" stop="88020"/>
                    <exon start="88574" stop="88667"/>
                    <exon start="88773" stop="88850"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKQVLTPTGSVYSGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPLDIAERHVLLLDPILGTG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88917" stop="89076"/>
                    <exon start="89194" stop="89255"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTSSRFYNNFSSKAYVSKTCNVYIHREFCCSSYFVTAEEGCPGVQHFIPQSHFCTSRSPCGVQAISKNKDCDI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="90163" PGL_stop="92897"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90163" e_stop="90228"/>
            <exon e_start="90771" e_stop="91151"/>
            <exon e_start="91385" e_stop="91686"/>
            <exon e_start="92310" e_stop="92897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.864" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90163" e_stop="90228" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90771" e_stop="91151" e_length="381"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.864">
            <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91385" e_stop="91686" e_length="302"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="92310" e_stop="92897" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738613" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90163" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90166" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90166" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90167" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725809" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90168" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90169" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90169" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90170" stop="90228"/>
              <exon start="90771" stop="91147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90171" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323372" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90174" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90175" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90178" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90179" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90184" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730333" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90184" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90187" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90191" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726201" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90194" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92458"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90777" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90793" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90800" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726189" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90800" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90831" stop="91151"/>
              <exon start="91385" stop="91610"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91014" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91412" stop="91686"/>
              <exon start="92310" stop="92802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421766" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91450" stop="91686"/>
              <exon start="92310" stop="92672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92310" stop="92897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540970" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92322" stop="92822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92372" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92400" stop="92820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92452" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237027" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG : AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG : GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG : GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATATATATAAAAAACAATAAACTTTGATGAGTGAAAG</gDNA_template>
            <first_frame> V  G  C  F  L  S  F  I  L  L  A  Q  P  C  L  P  L  W  E  N  M  P  :  R  N  L  S  R  M  P  S  T  *  Q  R  Q  G  K  V  F  W  Q  Q  M  K  A  L  A  L  L  E  N  V  Y  Q  A  L  M  L  K  T  L  N  Q  I  V  K  H  F  V  N  S  F  S  L  H  Q  M  L  F  L  T  S  L  V  L  F  S  L  K  K  H  F  T  K  A  L  L  M  E  S  R  L  L  N  F  F  K  R  T  M  L  F  L  G  L  R  L  T  R  V  P  W  I  W  L  G  P  M  V  R  P  Q  L  K  V  S  T  R  W  V  H  V  V  H  S  T  T  K  Q  :  V  L  V  L  P  N  G  E  L  C  *  K  L  G  L  L  S  L  Q  N  C  P  F  S  K  M  L  R  G  *  L  V  T  R  *  F  A  K  K  T  D  L  C  Q  L  W  S  Q  K  F  *  Q  M  E  I  M  I  S  R  N  V  Q  Q  P  L  K  L  F  L  L  L  F  I  R  H  S  M  T  S  M  F  F  L  K  E  H  F  *  S  L  T  W  S  P  L  A  L  I  A  P  R :   L  Q  Q  K  *  *  Q  S  T  R  S  Q  P  C  A  G  P  C  H  Q  Q  C  Q  G  *  C  S  Y  Q  E  D  R  V  R  K  R  Q  Q  *  T  *  M  Q  *  T  N  W  K  C  L  S  H  G  H  C  H  F  H  L  E  E  L  F  S  K  V  P  S  R  L  G  V  E  K  K  K  M  L  A  K  L  K  R  H  F  *  Q  G  A  R  L  I  Q  M  Q  H  L  E  S  I  Q  V  E  V  E  V  V  L  L  L  R  V  C  L  L  K  V  T  N  I  R  G  G  K  K  L  E  L  M  I  T  G  Y  I  L  L  S  L  V  L  I  L  I  T  C  F  M  L  K  I  *  S  F  *  F  Q  K  S  F  H  *  V  T  L  V  N  Y  C  S  K  F  I  F  T  *  P  R  K  *  R  K  K  I  Y  I  Y  K  K  Q  *  T  L  M  S  E   </first_frame>
            <second_frame>  L  A  A  S  L  A  L  S  F  *  H  N  H  V  C  L  C  G  K  I  C  R :   G  T  Y  Q  E  C  Q  V  H  S  N  A  R  E  R  Y  F  G  S  R  *  K  H  W  H  Y  W  K  T  F  I  K  H  *  C  *  K  H  *  T  K  S  S  S  T  S  *  T  P  F  H  F  T  K  C  S  S  L  P  L  W  C  Y  S  L  *  R  N  T  L  P  K  H  F  *  W  K  A  V  C  *  T  S  S  R  E  P  C  C  S  W  D  *  G  *  Q  G  Y  R  G  F  G  W  D  Q  W  *  D  H  N  S  R  F  R  L  V  G  C  T  L  C  T  V  L  Q  S  R :   C  S  F  C  Q  M  E  S  C  V  E  N  W  G  Y  *  A  F  R  I  V  H  S  A  K  C  S  G  A  S  S  L  R  D  N  L  P  R  K  R  T  C  A  N  C  G  A  R  N  S  D  R  W  K  S  *  Y  Q  E  M  C  S  S  H  *  N  C  S  C  C  C  L  *  G  T  Q  *  P  A  C  S  S  *  R  N  T  F  E  A  *  H  G  H  P  W  L  *  *  P  Q   : G  C  S  R  S  N  S  R  V  H  G  H  S  P  A  P  D  R  A  T  S  S  A  R  D  S  V  L  I  R  R  T  E  *  G  R  G  N  S  E  L  K  C  N  E  Q  I  G  S  A  *  A  M  D  T  V  I  F  I  W  K  S  S  S  A  K  Y  P  Q  D  L  G  W  K  K  R  K  C  W  Q  S  S  R  G  I  F  D  K  V  Q  G  *  F  R  C  N  T  W  K  V  Y  R  W  K  W  K  W  C  C  F  *  E  S  V  C  *  R  L  Q  I  L  E  G  E  K  S  W  S  *  *  *  Q  V  I  Y  Y  C  L  W  Y  *  F  *  *  H  V  L  C  *  K  F  S  L  F  N  F  K  N  L  S  I  K  *  L  L  *  I  T  V  Q  S  L  Y  S  L  N  Q  E  N  K  E  K  K  S  I  Y  I  K  N  N  K  L  *  *  V  K  </second_frame>
            <third_frame>   W  L  L  P  *  L  Y  P  F  S  T  T  M  S  A  F  V  G  K  Y  A   : E  E  L  I  K  N  A  K  Y  I  A  T  P  G  K  G  I  L  A  A  D  E  S  T  G  T  I  G  K  R  L  S  S  I  N  V  E  N  I  E  P  N  R  Q  A  L  R  E  L  L  F  T  S  P  N  A  L  P  Y  L  S  G  V  I  L  F  E  E  T  L  Y  Q  S  T  S  D  G  K  P  F  V  E  L  L  Q  E  N  H  V  V  P  G  I  K  V  D  K  G  T  V  D  L  A  G  T  N  G  E  T  T  T  Q  G  F  D  S  L  G  A  R  C  A  Q  Y  Y  K  A   : G  A  R  F  A  K  W  R  A  V  L  K  I  G  A  T  E  P  S  E  L  S  I  Q  Q  N  A  Q  G  L  A  R  Y  A  I  I  C  Q  E  N  G  L  V  P  I  V  E  P  E  I  L  T  D  G  N  H  D  I  K  K  C  A  A  A  T  E  T  V  L  A  A  V  Y  K  A  L  N  D  Q  H  V  L  L  E  G  T  L  L  K  P  N  M  V  T  P  G  S  D  S  P  K  :  V  A  A  E  V  I  A  E  Y  T  V  T  A  L  R  R  T  V  P  P  A  V  P  G  I  V  F  L  S  G  G  Q  S  E  E  E  A  T  V  N  L  N  A  M  N  K  L  E  V  L  K  P  W  T  L  S  F  S  F  G  R  A  L  Q  Q  S  T  L  K  T  W  G  G  K  K  E  N  V  G  K  A  Q  E  A  F  L  T  R  C  K  A  N  S  D  A  T  L  G  K  Y  T  G  G  S  G  S  G  A  A  S  E  S  L  F  V  K  G  Y  K  Y  *  R  G  K  K  V  G  V  D  D  N  R  L  Y  T  I  V  F  G  I  D  F  N  N  M  F  Y  V  K  N  L  V  F  L  I  S  K  I  F  P  L  S  N  S  C  K  L  L  F  K  V  Y  I  H  L  T  K  K  I  K  K  K  N  L  Y  I  *  K  T  I  N  F  D  E  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90180" stop="90228"/>
                    <exon start="90771" stop="91151"/>
                    <exon start="91385" stop="91686"/>
                    <exon start="92310" stop="92672"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPFSTTMSAFVGKYAEELIKNAKYIATPGKGILAADESTGTIGKRLSSINVENIEPNRQALRELLFTSPNALPYLSGVILFEETLYQSTSDGKPFVELLQENHVVPGIKVDKGTVDLAGTNGETTTQGFDSLGARCAQYYKAGARFAKWRAVLKIGATEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGNHDIKKCAAATETVLAAVYKALNDQHVLLEGTLLKPNMVTPGSDSPKVAAEVIAEYTVTALRRTVPPAVPGIVFLSGGQSEEEATVNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKKENVGKAQEAFLTRCKANSDATLGKYTGGSGSGAASESLFVKGYKY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92673" stop="92870"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGKKVGVDDNRLYTIVFGIDFNNMFYVKNLVFLISKIFPLSNSCKLLFKVYIHLTKKIKKKNLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90770" e_stop="91151"/>
            <exon e_start="91385" e_stop="91686"/>
            <exon e_start="92310" e_stop="92897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.864" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90770" e_stop="91151" e_length="382"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.864">
            <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91385" e_stop="91686" e_length="302"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="92310" e_stop="92897" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90770" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90770" stop="91151"/>
              <exon start="91385" stop="91601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90777" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90793" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90800" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726189" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90800" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90831" stop="91151"/>
              <exon start="91385" stop="91610"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91014" stop="91151"/>
              <exon start="91385" stop="91686"/>
              <exon start="92310" stop="92791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91412" stop="91686"/>
              <exon start="92310" stop="92802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421766" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91450" stop="91686"/>
              <exon start="92310" stop="92672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92310" stop="92897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540970" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92322" stop="92822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92372" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92400" stop="92820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92452" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237027" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG : GTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG : GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATATATATAAAAAACAATAAACTTTGATGAGTGAAAG</gDNA_template>
            <first_frame> E  E  L  I  K  N  A  K  Y  I  A  T  P  G  K  G  I  L  A  A  D  E  S  T  G  T  I  G  K  R  L  S  S  I  N  V  E  N  I  E  P  N  R  Q  A  L  R  E  L  L  F  T  S  P  N  A  L  P  Y  L  S  G  V  I  L  F  E  E  T  L  Y  Q  S  T  S  D  G  K  P  F  V  E  L  L  Q  E  N  H  V  V  P  G  I  K  V  D  K  G  T  V  D  L  A  G  T  N  G  E  T  T  T  Q  G  F  D  S  L  G  A  R  C  A  Q  Y  Y  K  A   : G  A  R  F  A  K  W  R  A  V  L  K  I  G  A  T  E  P  S  E  L  S  I  Q  Q  N  A  Q  G  L  A  R  Y  A  I  I  C  Q  E  N  G  L  V  P  I  V  E  P  E  I  L  T  D  G  N  H  D  I  K  K  C  A  A  A  T  E  T  V  L  A  A  V  Y  K  A  L  N  D  Q  H  V  L  L  E  G  T  L  L  K  P  N  M  V  T  P  G  S  D  S  P  K  :  V  A  A  E  V  I  A  E  Y  T  V  T  A  L  R  R  T  V  P  P  A  V  P  G  I  V  F  L  S  G  G  Q  S  E  E  E  A  T  V  N  L  N  A  M  N  K  L  E  V  L  K  P  W  T  L  S  F  S  F  G  R  A  L  Q  Q  S  T  L  K  T  W  G  G  K  K  E  N  V  G  K  A  Q  E  A  F  L  T  R  C  K  A  N  S  D  A  T  L  G  K  Y  T  G  G  S  G  S  G  A  A  S  E  S  L  F  V  K  G  Y  K  Y  *  R  G  K  K  V  G  V  D  D  N  R  L  Y  T  I  V  F  G  I  D  F  N  N  M  F  Y  V  K  N  L  V  F  L  I  S  K  I  F  P  L  S  N  S  C  K  L  L  F  K  V  Y  I  H  L  T  K  K  I  K  K  K  N  L  Y  I  *  K  T  I  N  F  D  E  *  K </first_frame>
            <second_frame>  R  N  L  S  R  M  P  S  T  *  Q  R  Q  G  K  V  F  W  Q  Q  M  K  A  L  A  L  L  E  N  V  Y  Q  A  L  M  L  K  T  L  N  Q  I  V  K  H  F  V  N  S  F  S  L  H  Q  M  L  F  L  T  S  L  V  L  F  S  L  K  K  H  F  T  K  A  L  L  M  E  S  R  L  L  N  F  F  K  R  T  M  L  F  L  G  L  R  L  T  R  V  P  W  I  W  L  G  P  M  V  R  P  Q  L  K  V  S  T  R  W  V  H  V  V  H  S  T  T  K  Q  :  V  L  V  L  P  N  G  E  L  C  *  K  L  G  L  L  S  L  Q  N  C  P  F  S  K  M  L  R  G  *  L  V  T  R  *  F  A  K  K  T  D  L  C  Q  L  W  S  Q  K  F  *  Q  M  E  I  M  I  S  R  N  V  Q  Q  P  L  K  L  F  L  L  L  F  I  R  H  S  M  T  S  M  F  F  L  K  E  H  F  *  S  L  T  W  S  P  L  A  L  I  A  P  R :   L  Q  Q  K  *  *  Q  S  T  R  S  Q  P  C  A  G  P  C  H  Q  Q  C  Q  G  *  C  S  Y  Q  E  D  R  V  R  K  R  Q  Q  *  T  *  M  Q  *  T  N  W  K  C  L  S  H  G  H  C  H  F  H  L  E  E  L  F  S  K  V  P  S  R  L  G  V  E  K  K  K  M  L  A  K  L  K  R  H  F  *  Q  G  A  R  L  I  Q  M  Q  H  L  E  S  I  Q  V  E  V  E  V  V  L  L  L  R  V  C  L  L  K  V  T  N  I  R  G  G  K  K  L  E  L  M  I  T  G  Y  I  L  L  S  L  V  L  I  L  I  T  C  F  M  L  K  I  *  S  F  *  F  Q  K  S  F  H  *  V  T  L  V  N  Y  C  S  K  F  I  F  T  *  P  R  K  *  R  K  K  I  Y  I  Y  K  K  Q  *  T  L  M  S  E   </second_frame>
            <third_frame>   G  T  Y  Q  E  C  Q  V  H  S  N  A  R  E  R  Y  F  G  S  R  *  K  H  W  H  Y  W  K  T  F  I  K  H  *  C  *  K  H  *  T  K  S  S  S  T  S  *  T  P  F  H  F  T  K  C  S  S  L  P  L  W  C  Y  S  L  *  R  N  T  L  P  K  H  F  *  W  K  A  V  C  *  T  S  S  R  E  P  C  C  S  W  D  *  G  *  Q  G  Y  R  G  F  G  W  D  Q  W  *  D  H  N  S  R  F  R  L  V  G  C  T  L  C  T  V  L  Q  S  R :   C  S  F  C  Q  M  E  S  C  V  E  N  W  G  Y  *  A  F  R  I  V  H  S  A  K  C  S  G  A  S  S  L  R  D  N  L  P  R  K  R  T  C  A  N  C  G  A  R  N  S  D  R  W  K  S  *  Y  Q  E  M  C  S  S  H  *  N  C  S  C  C  C  L  *  G  T  Q  *  P  A  C  S  S  *  R  N  T  F  E  A  *  H  G  H  P  W  L  *  *  P  Q   : G  C  S  R  S  N  S  R  V  H  G  H  S  P  A  P  D  R  A  T  S  S  A  R  D  S  V  L  I  R  R  T  E  *  G  R  G  N  S  E  L  K  C  N  E  Q  I  G  S  A  *  A  M  D  T  V  I  F  I  W  K  S  S  S  A  K  Y  P  Q  D  L  G  W  K  K  R  K  C  W  Q  S  S  R  G  I  F  D  K  V  Q  G  *  F  R  C  N  T  W  K  V  Y  R  W  K  W  K  W  C  C  F  *  E  S  V  C  *  R  L  Q  I  L  E  G  E  K  S  W  S  *  *  *  Q  V  I  Y  Y  C  L  W  Y  *  F  *  *  H  V  L  C  *  K  F  S  L  F  N  F  K  N  L  S  I  K  *  L  L  *  I  T  V  Q  S  L  Y  S  L  N  Q  E  N  K  E  K  K  S  I  Y  I  K  N  N  K  L  *  *  V  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90770" stop="91151"/>
                    <exon start="91385" stop="91686"/>
                    <exon start="92310" stop="92672"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EELIKNAKYIATPGKGILAADESTGTIGKRLSSINVENIEPNRQALRELLFTSPNALPYLSGVILFEETLYQSTSDGKPFVELLQENHVVPGIKVDKGTVDLAGTNGETTTQGFDSLGARCAQYYKAGARFAKWRAVLKIGATEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGNHDIKKCAAATETVLAAVYKALNDQHVLLEGTLLKPNMVTPGSDSPKVAAEVIAEYTVTALRRTVPPAVPGIVFLSGGQSEEEATVNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKKENVGKAQEAFLTRCKANSDATLGKYTGGSGSGAASESLFVKGYKY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92673" stop="92870"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGKKVGVDDNRLYTIVFGIDFNNMFYVKNLVFLISKIFPLSNSCKLLFKVYIHLTKKIKKKNLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="90164" e_stop="90228"/>
            <exon e_start="90771" e_stop="91151"/>
            <exon e_start="91310" e_stop="91686"/>
            <exon e_start="92310" e_stop="92897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="0.932"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.997"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="0.960"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="90164" e_stop="90228" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="90771" e_stop="91151" e_length="381"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91152" i_stop="91309" i_length="158"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="91310" e_stop="91686" e_length="377"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91687" i_stop="92309" i_length="623"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="92310" e_stop="92897" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91310" stop="91456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464356" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91310" stop="91451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90170" stop="90228"/>
              <exon start="90771" stop="91147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90793" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91412" stop="91686"/>
              <exon start="92310" stop="92802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421766" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91449" stop="91686"/>
              <exon start="92310" stop="92863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91450" stop="91686"/>
              <exon start="92310" stop="92672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92310" stop="92897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540970" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92322" stop="92822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92372" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92400" stop="92820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92452" stop="92858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237027" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG : AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG : CTGATTTTTTTAAAATCATAAGCTGTTAGAGGGAGAACAAGGTTTAATTATTTAACTACATTGTGTCTTGAGAAGGTGCTCGTTTTGCCAAATGGAGAGCTGTGTTGAAAATTGGGGCTACTGAGCCTTCAGAATTGTCCATTCAGCAAAATGCTCAGGGGCTAGCTCGTTACGCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGACCAGCATGTTCTTCTTGAAGGAACACTTTTGAAGCCTAACATGGTCACCCCTGGCTCTGATAGCCCCAAG : GTTGCAGCAGAAGTAATAGCAGAGTACACGGTCACAGCCCTGCGCCGGACCGTGCCACCAGCAGTGCCAGGGATAGTGTTCTTATCAGGAGGACAGAGTGAGGAAGAGGCAACAGTGAACTTAAATGCAATGAACAAATTGGAAGTGCTTAAGCCATGGACACTGTCATTTTCATTTGGAAGAGCTCTTCAGCAAAGTACCCTCAAGACTTGGGGTGGAAAAAAAGAAAATGTTGGCAAAGCTCAAGAGGCATTTTTGACAAGGTGCAAGGCTAATTCAGATGCAACACTTGGAAAGTATACAGGTGGAAGTGGAAGTGGTGCTGCTTCTGAGAGTCTGTTTGTTAAAGGTTACAAATATTAGAGGGGGAAAAAAGTTGGAGTTGATGATAACAGGTTATATACTATTGTCTTTGGTATTGATTTTAATAACATGTTTTATGTTAAAAATTTAGTCTTTTTAATTTCAAAAATCTTTCCATTAAGTAACTCTTGTAAATTACTGTTCAAAGTTTATATTCACTTAACCAAGAAAATAAAGAAAAAAAATCTATATATATAAAAAACAATAAACTTTGATGAGTGAAAG</gDNA_template>
            <first_frame> L  A  A  S  L  A  L  S  F  *  H  N  H  V  C  L  C  G  K  I  C  R :   G  T  Y  Q  E  C  Q  V  H  S  N  A  R  E  R  Y  F  G  S  R  *  K  H  W  H  Y  W  K  T  F  I  K  H  *  C  *  K  H  *  T  K  S  S  S  T  S  *  T  P  F  H  F  T  K  C  S  S  L  P  L  W  C  Y  S  L  *  R  N  T  L  P  K  H  F  *  W  K  A  V  C  *  T  S  S  R  E  P  C  C  S  W  D  *  G  *  Q  G  Y  R  G  F  G  W  D  Q  W  *  D  H  N  S  R  F  R  L  V  G  C  T  L  C  T  V  L  Q  S  S :   *  F  F  *  N  H  K  L  L  E  G  E  Q  G  L  I  I  *  L  H  C  V  L  R  R  C  S  F  C  Q  M  E  S  C  V  E  N  W  G  Y  *  A  F  R  I  V  H  S  A  K  C  S  G  A  S  S  L  R  D  N  L  P  R  K  R  T  C  A  N  C  G  A  R  N  S  D  R  W  K  S  *  Y  Q  E  M  C  S  S  H  *  N  C  S  C  C  C  L  *  G  T  Q  *  P  A  C  S  S  *  R  N  T  F  E  A  *  H  G  H  P  W  L  *  *  P  Q   : G  C  S  R  S  N  S  R  V  H  G  H  S  P  A  P  D  R  A  T  S  S  A  R  D  S  V  L  I  R  R  T  E  *  G  R  G  N  S  E  L  K  C  N  E  Q  I  G  S  A  *  A  M  D  T  V  I  F  I  W  K  S  S  S  A  K  Y  P  Q  D  L  G  W  K  K  R  K  C  W  Q  S  S  R  G  I  F  D  K  V  Q  G  *  F  R  C  N  T  W  K  V  Y  R  W  K  W  K  W  C  C  F  *  E  S  V  C  *  R  L  Q  I  L  E  G  E  K  S  W  S  *  *  *  Q  V  I  Y  Y  C  L  W  Y  *  F  *  *  H  V  L  C  *  K  F  S  L  F  N  F  K  N  L  S  I  K  *  L  L  *  I  T  V  Q  S  L  Y  S  L  N  Q  E  N  K  E  K  K  S  I  Y  I  K  N  N  K  L  *  *  V  K  </first_frame>
            <second_frame>  W  L  L  P  *  L  Y  P  F  S  T  T  M  S  A  F  V  G  K  Y  A   : E  E  L  I  K  N  A  K  Y  I  A  T  P  G  K  G  I  L  A  A  D  E  S  T  G  T  I  G  K  R  L  S  S  I  N  V  E  N  I  E  P  N  R  Q  A  L  R  E  L  L  F  T  S  P  N  A  L  P  Y  L  S  G  V  I  L  F  E  E  T  L  Y  Q  S  T  S  D  G  K  P  F  V  E  L  L  Q  E  N  H  V  V  P  G  I  K  V  D  K  G  T  V  D  L  A  G  T  N  G  E  T  T  T  Q  G  F  D  S  L  G  A  R  C  A  Q  Y  Y  K  A   : A  D  F  F  K  I  I  S  C  *  R  E  N  K  V  *  L  F  N  Y  I  V  S  *  E  G  A  R  F  A  K  W  R  A  V  L  K  I  G  A  T  E  P  S  E  L  S  I  Q  Q  N  A  Q  G  L  A  R  Y  A  I  I  C  Q  E  N  G  L  V  P  I  V  E  P  E  I  L  T  D  G  N  H  D  I  K  K  C  A  A  A  T  E  T  V  L  A  A  V  Y  K  A  L  N  D  Q  H  V  L  L  E  G  T  L  L  K  P  N  M  V  T  P  G  S  D  S  P  K  :  V  A  A  E  V  I  A  E  Y  T  V  T  A  L  R  R  T  V  P  P  A  V  P  G  I  V  F  L  S  G  G  Q  S  E  E  E  A  T  V  N  L  N  A  M  N  K  L  E  V  L  K  P  W  T  L  S  F  S  F  G  R  A  L  Q  Q  S  T  L  K  T  W  G  G  K  K  E  N  V  G  K  A  Q  E  A  F  L  T  R  C  K  A  N  S  D  A  T  L  G  K  Y  T  G  G  S  G  S  G  A  A  S  E  S  L  F  V  K  G  Y  K  Y  *  R  G  K  K  V  G  V  D  D  N  R  L  Y  T  I  V  F  G  I  D  F  N  N  M  F  Y  V  K  N  L  V  F  L  I  S  K  I  F  P  L  S  N  S  C  K  L  L  F  K  V  Y  I  H  L  T  K  K  I  K  K  K  N  L  Y  I  *  K  T  I  N  F  D  E  *  K </second_frame>
            <third_frame>   G  C  F  L  S  F  I  L  L  A  Q  P  C  L  P  L  W  E  N  M  P  :  R  N  L  S  R  M  P  S  T  *  Q  R  Q  G  K  V  F  W  Q  Q  M  K  A  L  A  L  L  E  N  V  Y  Q  A  L  M  L  K  T  L  N  Q  I  V  K  H  F  V  N  S  F  S  L  H  Q  M  L  F  L  T  S  L  V  L  F  S  L  K  K  H  F  T  K  A  L  L  M  E  S  R  L  L  N  F  F  K  R  T  M  L  F  L  G  L  R  L  T  R  V  P  W  I  W  L  G  P  M  V  R  P  Q  L  K  V  S  T  R  W  V  H  V  V  H  S  T  T  K  Q  :  L  I  F  L  K  S  *  A  V  R  G  R  T  R  F  N  Y  L  T  T  L  C  L  E  K  V  L  V  L  P  N  G  E  L  C  *  K  L  G  L  L  S  L  Q  N  C  P  F  S  K  M  L  R  G  *  L  V  T  R  *  F  A  K  K  T  D  L  C  Q  L  W  S  Q  K  F  *  Q  M  E  I  M  I  S  R  N  V  Q  Q  P  L  K  L  F  L  L  L  F  I  R  H  S  M  T  S  M  F  F  L  K  E  H  F  *  S  L  T  W  S  P  L  A  L  I  A  P  R :   L  Q  Q  K  *  *  Q  S  T  R  S  Q  P  C  A  G  P  C  H  Q  Q  C  Q  G  *  C  S  Y  Q  E  D  R  V  R  K  R  Q  Q  *  T  *  M  Q  *  T  N  W  K  C  L  S  H  G  H  C  H  F  H  L  E  E  L  F  S  K  V  P  S  R  L  G  V  E  K  K  K  M  L  A  K  L  K  R  H  F  *  Q  G  A  R  L  I  Q  M  Q  H  L  E  S  I  Q  V  E  V  E  V  V  L  L  L  R  V  C  L  L  K  V  T  N  I  R  G  G  K  K  L  E  L  M  I  T  G  Y  I  L  L  S  L  V  L  I  L  I  T  C  F  M  L  K  I  *  S  F  *  F  Q  K  S  F  H  *  V  T  L  V  N  Y  C  S  K  F  I  F  T  *  P  R  K  *  R  K  K  I  Y  I  Y  K  K  Q  *  T  L  M  S  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91381" stop="91686"/>
                    <exon start="92310" stop="92672"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGARFAKWRAVLKIGATEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGNHDIKKCAAATETVLAAVYKALNDQHVLLEGTLLKPNMVTPGSDSPKVAAEVIAEYTVTALRRTVPPAVPGIVFLSGGQSEEEATVNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKKENVGKAQEAFLTRCKANSDATLGKYTGGSGSGAASESLFVKGYKY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90180" stop="90228"/>
                    <exon start="90771" stop="91151"/>
                    <exon start="91310" stop="91338"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPFSTTMSAFVGKYAEELIKNAKYIATPGKGILAADESTGTIGKRLSSINVENIEPNRQALRELLFTSPNALPYLSGVILFEETLYQSTSDGKPFVELLQENHVVPGIKVDKGTVDLAGTNGETTTQGFDSLGARCAQYYKAADFFKIISC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92673" stop="92870"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGKKVGVDDNRLYTIVFGIDFNNMFYVKNLVFLISKIFPLSNSCKLLFKVYIHLTKKIKKKNLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="90164" e_stop="90228"/>
            <exon e_start="90771" e_stop="91151"/>
            <exon e_start="91385" e_stop="91395"/>
            <exon e_start="91483" e_stop="91616"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="0.932"/>
          <exon-intron don_prob="1.000" acc_prob="0.864" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.818"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="90164" e_stop="90228" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="90229" i_stop="90770" i_length="542"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="90771" e_stop="91151" e_length="381"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.864">
            <gDNA_intron_boundary i_start="91152" i_stop="91384" i_length="233"/>
          </intron>
          <exon e_serial="3" e_score="0.818">
            <gDNA_exon_boundary e_start="91385" e_stop="91395" e_length="11"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91396" i_stop="91482" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="0.970">
            <gDNA_exon_boundary e_start="91483" e_stop="91616" e_length="134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91151"/>
              <exon start="91385" stop="91395"/>
              <exon start="91483" stop="91616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90164" stop="90228"/>
              <exon start="90771" stop="91016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90170" stop="90228"/>
              <exon start="90771" stop="91147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90793" stop="91144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729747" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGGCTGCTTCCTTAGCTTTATCCTTTTAGCACAACCATGTCTGCCTTTGTGGGAAAATATGCCG : AGGAACTTATCAAGAATGCCAAGTACATAGCAACGCCAGGGAAAGGTATTTTGGCAGCAGATGAAAGCACTGGCACTATTGGAAAACGTTTATCAAGCATTAATGTTGAAAACATTGAACCAAATCGTCAAGCACTTCGTGAACTCCTTTTCACTTCACCAAATGCTCTTCCTTACCTCTCTGGTGTTATTCTCTTTGAAGAAACACTTTACCAAAGCACTTCTGATGGAAAGCCGTTTGTTGAACTTCTTCAAGAGAACCATGTTGTTCCTGGGATTAAGGTTGACAAGGGTACCGTGGATTTGGCTGGGACCAATGGTGAGACCACAACTCAAGGTTTCGACTCGTTGGGTGCACGTTGTGCACAGTACTACAAAGCAG : GTGCTCGTTTT : GCGATAATTTGCCAAGAAAACGGACTTGTGCCAATTGTGGAGCCAGAAATTCTGACAGATGGAAATCATGATATCAAGAAATGTGCAGCAGCCACTGAAACTGTTCTTGCTGCTGTTTATAAGGCACTCAATGA</gDNA_template>
            <first_frame> L  A  A  S  L  A  L  S  F  *  H  N  H  V  C  L  C  G  K  I  C  R :   G  T  Y  Q  E  C  Q  V  H  S  N  A  R  E  R  Y  F  G  S  R  *  K  H  W  H  Y  W  K  T  F  I  K  H  *  C  *  K  H  *  T  K  S  S  S  T  S  *  T  P  F  H  F  T  K  C  S  S  L  P  L  W  C  Y  S  L  *  R  N  T  L  P  K  H  F  *  W  K  A  V  C  *  T  S  S  R  E  P  C  C  S  W  D  *  G  *  Q  G  Y  R  G  F  G  W  D  Q  W  *  D  H  N  S  R  F  R  L  V  G  C  T  L  C  T  V  L  Q  S  R :   C  S  F   : C  D  N  L  P  R  K  R  T  C  A  N  C  G  A  R  N  S  D  R  W  K  S  *  Y  Q  E  M  C  S  S  H  *  N  C  S  C  C  C  L  *  G  T  Q  * </first_frame>
            <second_frame>  W  L  L  P  *  L  Y  P  F  S  T  T  M  S  A  F  V  G  K  Y  A   : E  E  L  I  K  N  A  K  Y  I  A  T  P  G  K  G  I  L  A  A  D  E  S  T  G  T  I  G  K  R  L  S  S  I  N  V  E  N  I  E  P  N  R  Q  A  L  R  E  L  L  F  T  S  P  N  A  L  P  Y  L  S  G  V  I  L  F  E  E  T  L  Y  Q  S  T  S  D  G  K  P  F  V  E  L  L  Q  E  N  H  V  V  P  G  I  K  V  D  K  G  T  V  D  L  A  G  T  N  G  E  T  T  T  Q  G  F  D  S  L  G  A  R  C  A  Q  Y  Y  K  A   : G  A  R  F  :  A  I  I  C  Q  E  N  G  L  V  P  I  V  E  P  E  I  L  T  D  G  N  H  D  I  K  K  C  A  A  A  T  E  T  V  L  A  A  V  Y  K  A  L  N   </second_frame>
            <third_frame>   G  C  F  L  S  F  I  L  L  A  Q  P  C  L  P  L  W  E  N  M  P  :  R  N  L  S  R  M  P  S  T  *  Q  R  Q  G  K  V  F  W  Q  Q  M  K  A  L  A  L  L  E  N  V  Y  Q  A  L  M  L  K  T  L  N  Q  I  V  K  H  F  V  N  S  F  S  L  H  Q  M  L  F  L  T  S  L  V  L  F  S  L  K  K  H  F  T  K  A  L  L  M  E  S  R  L  L  N  F  F  K  R  T  M  L  F  L  G  L  R  L  T  R  V  P  W  I  W  L  G  P  M  V  R  P  Q  L  K  V  S  T  R  W  V  H  V  V  H  S  T  T  K  Q  :  V  L  V  L :   R  *  F  A  K  K  T  D  L  C  Q  L  W  S  Q  K  F  *  Q  M  E  I  M  I  S  R  N  V  Q  Q  P  L  K  L  F  L  L  L  F  I  R  H  S  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90180" stop="90228"/>
                    <exon start="90771" stop="91151"/>
                    <exon start="91385" stop="91395"/>
                    <exon start="91483" stop="91614"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPFSTTMSAFVGKYAEELIKNAKYIATPGKGILAADESTGTIGKRLSSINVENIEPNRQALRELLFTSPNALPYLSGVILFEETLYQSTSDGKPFVELLQENHVVPGIKVDKGTVDLAGTNGETTTQGFDSLGARCAQYYKAGARFAIICQENGLVPIVEPEILTDGNHDIKKCAAATETVLAAVYKALN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="92540" PGL_stop="92308"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92540" e_stop="92308"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="92540" e_stop="92308" e_length="233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92540" stop="92308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTCTTTTTTTCCACCCCAAGTCTTGAGGGTACTTTGCTGAAGAGCTCTTCCAAATGAAAATGACAGTGTCCATGGCTTAAGCACTTCCAATTTGTTCATTGCATTTAAGTTCACTGTTGCCTCTTCCTCACTCTGTCCTCCTGATAAGAACACTATCCCTGGCACTGCTGGTGGCACGGTCCGGCGCAGGGCTGTGACCGTGTACTCTGCTATTACTTCTGCTGCAACCT</gDNA_template>
            <first_frame> I  F  F  F  S  T  P  S  L  E  G  T  L  L  K  S  S  S  K  *  K  *  Q  C  P  W  L  K  H  F  Q  F  V  H  C  I  *  V  H  C  C  L  F  L  T  L  S  S  *  *  E  H  Y  P  W  H  C  W  W  H  G  P  A  Q  G  C  D  R  V  L  C  Y  Y  F  C  C  N   </first_frame>
            <second_frame>  F  S  F  F  P  P  Q  V  L  R  V  L  C  *  R  A  L  P  N  E  N  D  S  V  H  G  L  S  T  S  N  L  F  I  A  F  K  F  T  V  A  S  S  S  L  C  P  P  D  K  N  T  I  P  G  T  A  G  G  T  V  R  R  R  A  V  T  V  Y  S  A  I  T  S  A  A  T  </second_frame>
            <third_frame>   F  L  F  F  H  P  K  S  *  G  Y  F  A  E  E  L  F  Q  M  K  M  T  V  S  M  A  *  A  L  P  I  C  S  L  H  L  S  S  L  L  P  L  P  H  S  V  L  L  I  R  T  L  S  L  A  L  L  V  A  R  S  G  A  G  L  *  P  C  T  L  L  L  L  L  L  Q  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0119A22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="94782" PGL_stop="94125"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94782" e_stop="94125"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="94782" e_stop="94125" e_length="658"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94782" stop="94174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94616" stop="94125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203362" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTATTTGTAGTTTTGATGATTTGACAAACTTACGGACCTCATAAAGGTACCGGGTTTTCTACTTGAGTATTGCGGGTGTCTTCTTTGAAGTATTGCAGATGAAACAAACCCAGGGACCTAGTAGAGATACCAGGCCCTCATGATGATGAGCCAGTCAACTGCCAGCTGGAGACGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCCAACCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGTTCCAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAGGCTACACAAAGAAAAGGCAGAATCATTCCTAGGACAACAGCAACATCTGGAGCTTTTCGTCTGGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAAATCTATAAAGGAATTGGTGTGTTGCGTTAAAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTTGGCTGGCCTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACGTTTGGTGTAATCGTGTTTCGCTTTTGCATTTGAAGATTAGTGAAAACGATTGAAA</gDNA_template>
            <first_frame> C  Y  L  *  F  *  *  F  D  K  L  T  D  L  I  K  V  P  G  F  L  L  E  Y  C  G  C  L  L  *  S  I  A  D  E  T  N  P  G  T  *  *  R  Y  Q  A  L  M  M  M  S  Q  S  T  A  S  W  R  R  T  E  S  R  C  T  L  P  D  G  V  R  K  V  *  P  F  Q  P  M  A  K  K  F  R  K  V  T  C  P  Y  K  R  H  F  P  K  H  L  C  S  S  F  C  N  L  I  K  T  F  Q  E  L  L  Q  R  L  H  K  E  K  A  E  S  F  L  G  Q  Q  Q  H  L  E  L  F  V  W  L  F  R  N  L  F  S  C  S  *  I  V  N  H  S  *  I  Y  K  G  I  G  V  L  R  *  K  S  R  L  S  R  W  D  S  L  V  G  R  L  F  F  Y  F  G  W  P  V  E  Q  *  R  S  I  A  *  R  *  D  *  *  L  F  L  T  F  G  V  I  V  F  R  F  C  I  *  R  L  V  K  T  I  E  </first_frame>
            <second_frame>  V  I  C  S  F  D  D  L  T  N  L  R  T  S  *  R  Y  R  V  F  Y  L  S  I  A  G  V  F  F  E  V  L  Q  M  K  Q  T  Q  G  P  S  R  D  T  R  P  S  *  *  *  A  S  Q  L  P  A  G  D  V  Q  K  V  G  A  H  F  P  M  A  S  E  K  C  D  L  S  N  Q  W  Q  R  S  L  G  K  *  L  A  H  I  K  G  T  F  L  N  I  C  V  P  V  F  A  T  *  *  K  L  F  K  N  S  C  K  G  Y  T  K  K  R  Q  N  H  S  *  D  N  S  N  I  W  S  F  S  S  G  C  L  G  I  Y  S  L  V  L  K  L  *  T  T  P  K  S  I  K  E  L  V  C  C  V  K  S  L  G  C  P  G  G  I  A  *  W  V  D  C  F  S  T  L  A  G  L  L  S  N  R  G  L  L  L  N  G  K  I  D  N  S  F  L  R  L  V  *  S  C  F  A  F  A  F  E  D  *  *  K  R  L  K </second_frame>
            <third_frame>   L  F  V  V  L  M  I  *  Q  T  Y  G  P  H  K  G  T  G  F  S  T  *  V  L  R  V  S  S  L  K  Y  C  R  *  N  K  P  R  D  L  V  E  I  P  G  P  H  D  D  E  P  V  N  C  Q  L  E  T  Y  R  K  *  V  H  T  S  R  W  R  Q  K  S  V  T  F  P  T  N  G  K  E  V  *  E  S  D  L  P  I  *  K  A  L  S  *  T  F  V  F  Q  F  L  Q  L  D  K  N  F  S  R  T  L  A  K  A  T  Q  R  K  G  R  I  I  P  R  T  T  A  T  S  G  A  F  R  L  V  V  *  E  F  I  L  L  F  L  N  C  K  P  L  L  N  L  *  R  N  W  C  V  A  L  K  V  *  V  V  Q  V  G  *  L  S  G  *  I  V  F  L  L  W  L  A  C  *  A  I  E  V  Y  C  L  T  V  R  L  I  T  L  S  Y  V  W  C  N  R  V  S  L  L  H  L  K  I  S  E  N  D  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0119A22.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94560" stop="94345"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFQPMAKKFRKVTCPYKRHFPKHLCSSFCNLIKTFQELLQRLHKEKAESFLGQQQHLELFVWLFRNLFSCS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 1054 chains have been computed
$ 
$ memory statistics:
$ 1780776 bytes spliced alignments in total
$ 803 spliced alignments have been stored
$ 2217 bytes was the average size of a spliced alignment
$ 58416 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 3245 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 1124 backtrace matrices have been allocated
$ 
$ date finished: 2008-11-22 17:08:56
-->
