FGENESH 2.4 Prediction of potential genes in Tomato genomic DNA
 Time    :   Fri Feb  9 17:18:47 2007
 Seq name: C08HBa0294K15.1 submitted_to_sgn_as:C08HBa0294K15 
 Length of sequence: 72577 
 Number of predicted genes 8 in +chain 4 in -chain 4
 Number of predicted exons 18 in +chain 6 in -chain 12
 Positions of predicted genes and exons: Variant   1 from   1, Score:394.137646 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA     17955                1.61
   1 -    1 CDSo     17960 -     18151   10.49     17960 -     18151    192

   2 -      PolA     24831               -3.19
   2 -    1 CDSl     24991 -     26820   76.93     24991 -     26820   1830
   2 -    2 CDSf     26854 -     27525   26.26     26854 -     27525    672

   3 +    1 CDSo     30376 -     30885   48.69     30376 -     30885    510
   3 +      PolA     30993                1.61

   4 -      PolA     33066                1.61
   4 -    1 CDSl     33781 -     33879   -2.45     33781 -     33879     99
   4 -    2 CDSf     35432 -     35779   16.20     35432 -     35779    348

   5 +    1 CDSo     36820 -     37044   15.55     36820 -     37044    225
   5 +      PolA     37760                1.61

   6 +    1 CDSo     42203 -     42718   27.29     42203 -     42718    516
   6 +      PolA     42761               -3.59

   7 -      PolA     42901               -0.59
   7 -    1 CDSl     43202 -     43639   61.45     43202 -     43639    438
   7 -    2 CDSi     43744 -     43836    5.42     43744 -     43836     93
   7 -    3 CDSi     43918 -     44007   13.54     43918 -     44007     90
   7 -    4 CDSi     44231 -     44295   14.95     44231 -     44293     63
   7 -    5 CDSi     44822 -     44892    0.67     44823 -     44891     69
   7 -    6 CDSi     45080 -     45118    6.55     45082 -     45117     36
   7 -    7 CDSf     46425 -     46843   38.02     46427 -     46843    417

   8 +    1 CDSf     68386 -     68875   60.49     68386 -     68874    489
   8 +    2 CDSi     69123 -     69161    0.35     69125 -     69160     36
   8 +    3 CDSl     69351 -     69367   -0.37     69353 -     69367     15
   8 +      PolA     69723                1.61

Predicted protein(s):
>FGENESH:   1   1 exon (s)  17960  -  18151    63 aa, chain -
MGFLPRFSLKSFRSKQQRQRNLQPRIFSRSYTEIENQNSLLSKNPNKNLSTKNSNVLYGR
QRK
>FGENESH:   2   2 exon (s)  24991  -  27525   833 aa, chain -
MTAESTQSSTVSITVSTVIAATVRPIHDPSSVYYLHPSEGPSNSLTKYLLKGDNFDVWEQ
AICNALEGRSKIGFLYEKGFPKPTNVLELDAWKANNSIICSWIFNSADETIQPSLVAQKI
AHELWTDMKARYGGTNAPKSWQLKSDLQMLRQKGQSVVSYYNQFIIVWNQLYGSIDPTCG
CICPAAAKMRLRFEEEKTQAFLLGLDDAQFGATRSQIFGTRPLPEERYKSIVRNCDDRTD
GLTFAVETQPTPPPKYKCTHCGKTGHSAERCFLLVGFPNGGRGGCVGGRGGRGGRGPPGR
EQSTSRDSGTAAHTDGPTPVPASTSGSSQSGVLFGLSAEQMTRLLIMLDTPAQSGNNTGK
VHALSPDWLIDSGASHHMTGNFPSLYDIMSVPECSIGLPDGTRVMANYCGSVQISANLFL
RNVLFVPTLKCNLISIGCLIEFNNYRVIFDDCCCVLQDRVLTMEIGRGTAFNGVYVFQSQ
AFVLASRVDQVELLHKQLGHLSPAILCSPPFNKSPSDIKQLESCEICFYSKQTRSSFSSS
SNKAVDLIHCDLWGPYSTCVSSGSYYFLTIVDDHSRAVWVYLISDKSEVTSCLKQFFMLI
QTQYHETIKIIRSDNGTEFLNTPLRQFYHDVGVLVQTSCVGTPQQNGRVERKRRHILNVA
RSLMFQASLPVEFWGEYVRTAVYLINRTPRRLIGGKSPFEILNKAPQDISQLRVFGCLCF
VRNIQRPPYKFAPRSLKCMFLGYPSGKKGWRVYDLENHRFFHTRDIAFDETIFPFATTPT
TLPATTYTPPVQHADFPIVVSTTQPNTIAVQQPEPTSATESTATVPPVDPGVV
>FGENESH:   3   1 exon (s)  30376  -  30885   169 aa, chain +
MEQQKDSQPKWEAKVSTTLHKASADQIFSLFKDFFGLNKWFPSLSTCYGIHGENGEAGCI
RYCTGFSLPPERGGGATGEAPVSGWSKERLVAIDPTERILSYEMVDCNIGFKSYFSTVKI
VPNGVDGCVIEWFITVDPVEGMRLEDLVNKYDVGLQGMAKNMQNALTSS
>FGENESH:   4   2 exon (s)  33781  -  35779   148 aa, chain -
MQASALPKSQNAPKDFQSLIPSRMKQHTNIVVSCGEVLKAKSHVMVYTKKREEDEESVGS
SYHITTQDEIHTYSLIKIAGESENVSWCYHISFSDVEPQEDEDAKDVPPELEEGVKTSVI
TWKNYIKLITEVMMTAFWRDPPFALPRS
>FGENESH:   5   1 exon (s)  36820  -  37044    74 aa, chain +
MLCGVDPVLKTSLSTKAKGFSYVDRLNWARTLSTISAMSSFASFAEDSTFLGDKPKATTD
SDNTPEACCPNNLA
>FGENESH:   6   1 exon (s)  42203  -  42718   171 aa, chain +
MATQQLESKWEGKFIVNLKHAKAEQVWPLLEDFFNFHKWLPNIDTCHQIDSDNKDEIIRY
CASTTPLSSGDGEAIIKWCHEKLLTIDKIERCISYEVLDNNIGIKYYVSTLKVLSLDEGG
CQIEWLFVADPIDGLTLELFSGYINSSLQGMAENIEKALESSKLGDFVCSN
>FGENESH:   7   7 exon (s)  43202  -  46843   404 aa, chain -
MESSLPVEELTSGASGRIIPLFKNLHRSVFSYQTYRRLIIFIQSIFLWVILLSRRRFSTS
PSSPPPSPSAATTAVLGKRRKFALRRDEEDTQRRRALAEALDMTVENDGVSCRWNTSLFF
GARRNALFCRSWFPVTDELRGIIIIIHGLNEHSGRYAHFARQLNSCNFGVYAMDWIGHGG
SDGLHGYVPSLDHVVADTGAFLEKVKFDNPGIPCFLFGHSTGGAVVLKAASYPHIENMVE
GIILTSPALRVKPANPIVSAVAPIFSLVAPRYQFKGSHKRGIPVSRDPAALVAKYSDPLV
YTGPLRVRTGHEILRISSYLMRNFKSVTVPFLVLHGSADRVTDPLASQDLYNEAASEFKD
IKLYDGFLHDLLFEPEREEIAQDIIDWMHKKLDSGNLANVYSQC
>FGENESH:   8   3 exon (s)  68386  -  69367   181 aa, chain +
MGHNREETIVGTKKLAIDNGLQRTISDISFELSKEVAALVVCDRDDDDDIEKNVLPPISE
VEDAKCECCGMSEECTLEYVKRVKEKYSGKLICGLCSEAVKEEMEKNGGKKLEEALNEHM
NACSKFNRLGRAYPLLYQAEAMRQILKKSRAKSLSPRDNTQKKECCNNYSNQWEYSCVIT
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