GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 22:01:06 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-MWRqf/C08HBa0165B06/C08HBa0165B06.seq.screen ________________________________________________________________________________ Sequence 1: C08HBa0165B06.1, from 1 to 130549, both strands analyzed. ... started at: Mon Aug 28 22:22:45 2006 EST library file: /tmp/cxgn-bacpublish-resources-WeAY5g/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 6 ... matches indexed, elapsed seconds = 6 HitsTableSize = 140 EST library file: /tmp/cxgn-bacpublish-resources-WeAY5g/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 5 ... matches indexed, elapsed seconds = 6 HitsTableSize = 316 ******************************************************************************** EST sequence 85 +strand 748 n (File: SGN-E543260+) 1 GGGCCCCCCT CGAGTTTTTT TTTTTTTTTT TTTTTAACAT AATATTTGTT TTTATTGCAA 61 ACAACAAAAA TAACATACTC AGTGTAGTTT TACAAGTGTG GTCTGTGGAG GGTGAGGCTG 121 ACAAGGTGGG GTGGAACATA TGAACACAAG AGTAAACATA TGGGATAATA AACCAATGTT 181 AACATCTTTA AGATGGTTTT ATTGCAAATG AAAAATCTTG ATCAGTATGT CACTGAGATC 241 AGCTCCTTCA TTTGTTTCTT CACAAATAAT CAGAAAACCA AGCAGCAATT TGGCTCCTAA 301 CAATGTGGTT TTCAGAAATC CATCTAAGAG ATCCCTGAGT ATATGTAGTA CTTGGTGCAG 361 CAAAAGGTGT AAATGTTACT TGATAGCTCA ATTTTTGTTT CACATCTGAA AAAACAAGTG 421 TAGTTGGTTC AACTTTCACA TCAAGGCCTT GCGGTGAATC AATATCAACT CGGTATGTCG 481 AGTTGGCTTG TCCTACATTT GTCACAGTTC TTGAATATAC TTGAACTCCT GAGTTGCTTT 541 TAACTTGAAT TGCAAACGAT GGATAATTTA GTTGACCTTC TAAGATACTC GTAACCTCTG 601 AACAATTAAC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 661 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 721 TTGATGGATT AACATGACCG GCACCTGT Predicted gene structure (within gDNA segment 1 to 5601): Exon 1 158 343 ( 186 n); cDNA 36 226 ( 191 n); score: 0.809 Intron 1 344 854 ( 511 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.88) Exon 2 855 1376 ( 522 n); cDNA 227 748 ( 522 n); score: 0.897 PPA cDNA 35 14 MATCH C08HBa0165B06.1+ SGN-E543260+ 0.874 708 0.947 C PGS_C08HBa0165B06.1+_SGN-E543260+ (158 343,855 1376) Alignment (genomic DNA sequence = upper lines): AACATAATAT TTGTTTTTAT TGCAAACAAC AATAATAACA TACTCAATAT AGTCTCATAA 217 |||||||||| |||||||||| |||||||||| || ||||||| |||||| | | ||| | | || AACATAATAT TTGTTTTTAT TGCAAACAAC AAAAATAACA TACTCAGTGT AGTTTTACAA 95 GTGTGGTCTG ATGAGGGTGA GGGTGACAAG GCGGGGTGCA ACGGAAG-A- AGAAGA-T-- 272 |||||||||| |||||||| || ||||||| | |||||| | || | | | | |||| | GTGTGGTCTG TGGAGGGTGA GGCTGACAAG GTGGGGTGGA ACATATGAAC ACAAGAGTAA 155 ACATTTACAA TGATAAACTA ATGTTAACAT CTTCAAGATG GTTTTATTGC AAATGAAAAA 332 |||| | | | |||||| | |||||||||| ||| |||||| |||||||||| |||||||||| ACATATGGGA TAATAAACCA ATGTTAACAT CTTTAAGATG GTTTTATTGC AAATGAAAAA 215 TCTTAATCAG TGTATTACAC TATAACAAAA ATGATCATTC TTAATTGCCA CTAAATAGGG 392 |||| ||||| | TCTTGATCAG T......... .......... .......... .......... .......... 226 ATAATGCCCA AGTACCTCCT CAACCTATGT CCGAAATCTC ACAGACACAC TTATACTATA 452 .......... .......... .......... .......... .......... .......... 226 CTAAGGTCCT ATTCCCCCCT GAACTTATTT TATTAGTAAC TTTTTACCCC TTTTTAGCTT 512 .......... .......... .......... .......... .......... .......... 226 ACGTGGCACT ATCTTGTGGG CTCAACGATG ATTGACTTTT TTTTTCAAAC TAGTGCCACG 572 .......... .......... .......... .......... .......... .......... 226 TAGGCTAAAA AGGGTAGAAA ATTACATATA AAATAAGTTC AGGGGTAATA GGACCTTACT 632 .......... .......... .......... .......... .......... .......... 226 ATAGTATAAG TGTGTCTCTG GAATTTCGGG CATAGGTTGA GGGGGTACTT GAGTATTTTC 692 .......... .......... .......... .......... .......... .......... 226 CCCACTAAAT ATGTATTTTA AGCGGCATTT GTCACTCTTT GTATATGTCC CTAAATCCTT 752 .......... .......... .......... .......... .......... .......... 226 TAGCGACATT GGTTCTAGCG GCACTTAACT AATGCCGGTA AAGGCTTTAG CACTCTTTAT 812 .......... .......... .......... .......... .......... .......... 226 TAGTGTCAAT ATTTAATGCC GCTAAAGGTC GTTTTTGTTG TAGTGTCACT GAGATCAGCT 872 ||||||| |||||||||| .......... .......... .......... .......... ..ATGTCACT GAGATCAGCT 244 CCTTCATTTG TTTTTTCAAA ATAAATCGGA AAACCCAACA GCAATGGGGC TCCGAACTAC 932 |||||||||| ||| |||| | | |||| || ||||| | || ||||| ||| ||| ||| | CCTTCATTTG TTTCTTCACA AATAATCAGA AAACCAAGCA GCAATTTGGC TCCTAACAAT 304 ATAATTTTCA GAAATCCATC TGAGAGATCC CTGAGTATAT ATGGTACTTG GTCTAGAAAA 992 | |||||| |||||||||| | |||||||| |||||||||| | ||||||| || || ||| GTGGTTTTCA GAAATCCATC TAAGAGATCC CTGAGTATAT GTAGTACTTG GTGCAGCAAA 364 AGGTGTAAAT GTTACTTGAT AGCTCAATTT TTGTTTTACC TTTGAAAAAA CAAGTGTAGT 1052 |||||||||| |||||||||| |||||||||| |||||| || | |||||||| |||||||||| AGGTGTAAAT GTTACTTGAT AGCTCAATTT TTGTTTCACA TCTGAAAAAA CAAGTGTAGT 424 TGGTTCAACT TTCACATCAA GGCCTCGCGG TGAATCAATA TCAACTCGGT ATGTTGAGTT 1112 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||| ||||| TGGTTCAACT TTCACATCAA GGCCTTGCGG TGAATCAATA TCAACTCGGT ATGTCGAGTT 484 GGCTGTTCCT ACATTTGTCA CAGTTCTTGA ATAAACTTGA GCTTCTGAGT TGTTTCTGAC 1172 |||| |||| |||||||||| |||||||||| ||| |||||| || |||||| || || | || GGCTTGTCCT ACATTTGTCA CAGTTCTTGA ATATACTTGA ACTCCTGAGT TGCTTTTAAC 544 TTGAATTGCG AATGATGGGT AATTTAGTTG ACCTTCTAAG ATGCTCGTAA TCTCTGAACA 1232 ||||||||| || ||||| | |||||||||| |||||||||| || ||||||| ||||||||| TTGAATTGCA AACGATGGAT AATTTAGTTG ACCTTCTAAG ATACTCGTAA CCTCTGAACA 604 ATTAACTTTG CGCTGCACAA TGACAGTAAC TTGTCTGTTT GTGTAATTCA AACCACATAA 1292 |||||||||| ||||||| || |||| | || |||||||||| |||||||||| |||||||||| ATTAACTTTG CGCTGCAGAA TGACTGCAAT TTGTCTGTTT GTGTAATTCA AACCACATAA 664 ATAAGGTATG TAATCAGATG GCTCAATATC ATATACCAGG CCAGGATCAT TTGCTTTTGA 1352 |||||||| | |||||||||| ||| ||||| ||||| |||| || || ||| |||||||||| ATAAGGTAAG TAATCAGATG GCTTGATATC ATATATCAGG CCGGGGGCAT TTGCTTTTGA 724 TGGATTAACG TGGCCTGCAC CTGT 1376 ||||||||| || || |||| |||| TGGATTAACA TGACCGGCAC CTGT 748 hqPGS_C08HBa0165B06.1+_SGN-E543260+ (158 343,855 1376) ******************************************************************************** EST sequence 45 +strand 858 n (File: SGN-E540411+) 1 TTTTTTTTTT CTCATAAACA TAAAGTACAC TAATATTATT ATTATAAAAT TCTCCAGTCT 61 TATACAAAAC AACATATGAC TTCACTTGAA CTATAATTAA AGAACAATAA AGGGATAATG 121 CACAAGTACC CCCTCAACCT ATGCCCGAAA TTCCAGAGAC ACACTTATAC TATACTAAGG 181 TCCTATTACC CCCCTGAACT TATTTTATAA GTAATTTTCT ACCCCTTTTT AGCCTACGTG 241 GCACTAGTTT AAAAAAAAAG TCAACAACCA TTGGGCCCAC AAGATAGTGC CACGTAGGTC 301 TAAAAGGGGT AAAAAATTAT TAATAAATAA GTTCAGGGGG TAATAAGATC TTAGTATGGT 361 ATAAGTGTAT CTCTGAGATT TTGGACATAG GCTAAGGGGG TACTTGGACA TTATCCCAAC 421 AATAAATAAA GGATATAACA TGATTCAAAA GACAACACGT GATAACCACT TCTACAACTT 481 GTGCATGATC AATTGAGCAC CATATTGAGG TTGAAGCAAC AATGGGTGAG GAGCATGAGC 541 ATAAGATGGA GAGAGTTCAA ATGCATAATG TTTTAGAATC ATGACCATTG CCATTTTTGC 601 CTCTAACATA GCAAAATTTT GCCCAATACA TATTCTTGGA CCCCAACTAA ATGGAAAAAA 661 TACAACTTGT CCTTTTGTTG CTTTTGATAT TCCTTCACTA AATCTCTCTG GCATAAACTC 721 CATTGCATCA TCTCCCCATA TTTCAGTATC ATGATGCACT AACATTGTTG CCAATATGAG 781 TTGGACCCCA GAGGGTAACA CAAATCCCCT AACTTTGTTT CTGTATTCAC CATGCGATTA 841 ATCGCGTATA CTGATGTA Predicted gene structure (within gDNA segment 1 to 9995): Exon 1 391 702 ( 312 n); cDNA 113 425 ( 313 n); score: 0.774 Intron 1 703 1804 (1102 n); Pd: 0.000 (s: 0.72), Pa: 0.875 (s: 0) Exon 2 1805 1820 ( 16 n); cDNA 426 441 ( 16 n); score: 0.562 Intron 2 1821 4361 (2541 n); Pd: 0.339 (s: 0), Pa: 0.324 (s: 0) Exon 3 4362 4373 ( 12 n); cDNA 442 451 ( 10 n); score: 0.583 Intron 3 4374 4751 ( 378 n); Pd: 0.941 (s: 0), Pa: 0.000 (s: 0) Exon 4 4752 4771 ( 20 n); cDNA 452 470 ( 19 n); score: 0.650 Intron 4 4772 6169 (1398 n); Pd: 0.897 (s: 0), Pa: 0.631 (s: 0.62) Exon 5 6170 6227 ( 58 n); cDNA 471 527 ( 57 n); score: 0.603 Intron 5 6228 8783 (2556 n); Pd: 0.000 (s: 0.62), Pa: 0.837 (s: 0) Exon 6 8784 8821 ( 38 n); cDNA 528 564 ( 37 n); score: 0.553 Intron 6 8822 9079 ( 258 n); Pd: 0.000 (s: 0), Pa: 0.795 (s: 0) Exon 7 9080 9091 ( 12 n); cDNA 565 576 ( 12 n); score: 0.667 PPA cDNA 12 1 MATCH C08HBa0165B06.1+ SGN-E540411+ 0.747 468 0.545 C PGS_C08HBa0165B06.1+_SGN-E540411+ (391 702,1805 1820,4362 4373,4752 4771,6170 6227,8784 8821,9080 9091) Alignment (genomic DNA sequence = upper lines): GGATAATGCC CAAGTACCTC CTCAACCTAT GTCCGAAATC TCACAGACAC ACTTATACTA 450 ||||||||| |||||||| | |||||||||| | ||||||| || |||||| |||||||||| GGATAATGCA CAAGTACCCC CTCAACCTAT GCCCGAAATT CCAGAGACAC ACTTATACTA 172 TACTAAGGTC CTATT-CCCC CCTGAACTTA TTTTATTAGT AACTTTTTAC CCCTTTTTAG 509 |||||||||| ||||| |||| |||||||||| |||||| ||| || ||| ||| |||||||||| TACTAAGGTC CTATTACCCC CCTGAACTTA TTTTATAAGT AATTTTCTAC CCCTTTTTAG 232 CTTACGTGGC ACTATCTTGT GGGCTCAACG ATGATTGACT TTTTTTTTCA AACTAGTGCC 569 | |||||||| |||| || | | | | | | || | ||||||| CCTACGTGGC ACTAGTTTAA AAAAAAAGTC AACAACCA-T TGGGCCCACA AGATAGTGCC 291 ACGTAGG-CT AAAAAGGGTA GAAAATTACA TATAAAATAA GTTCA-GGGG TAATAGGACC 627 ||||||| || |||| ||||| ||||||| || |||||| ||||| |||| ||||| || | ACGTAGGTCT AAAAGGGGTA AAAAATTA-T TAATAAATAA GTTCAGGGGG TAATAAGATC 350 TTACTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG GTTGAGGGGG TACTTGAGTA 687 ||| ||| || |||||||| | ||||| ||| | || ||||| | | |||||| |||||| | TTAGTATGGT ATAAGTGTAT CTCTGAGATT TTGGACATAG GCTAAGGGGG TACTTGGACA 410 TTTTCCCCAC TAAATATGTA TTTTAAGCGG CATTTGTCAC TCTTTGTATA TGTCCCTAAA 747 || |||| || | | TTATCCCAAC AATAA..... .......... .......... .......... .......... 425 TCCTTTAGCG ACATTGGTTC TAGCGGCACT TAACTAATGC CGGTAAAGGC TTTAGCACTC 807 .......... .......... .......... .......... .......... .......... 425 TTTATTAGTG TCAATATTTA ATGCCGCTAA AGGTCGTTTT TGTTGTAGTG TCACTGAGAT 867 .......... .......... .......... .......... .......... .......... 425 CAGCTCCTTC ATTTGTTTTT TCAAAATAAA TCGGAAAACC CAACAGCAAT GGGGCTCCGA 927 .......... .......... .......... .......... .......... .......... 425 ACTACATAAT TTTCAGAAAT CCATCTGAGA GATCCCTGAG TATATATGGT ACTTGGTCTA 987 .......... .......... .......... .......... .......... .......... 425 GAAAAAGGTG TAAATGTTAC TTGATAGCTC AATTTTTGTT TTACCTTTGA AAAAACAAGT 1047 .......... .......... .......... .......... .......... .......... 425 GTAGTTGGTT CAACTTTCAC ATCAAGGCCT CGCGGTGAAT CAATATCAAC TCGGTATGTT 1107 .......... .......... .......... .......... .......... .......... 425 GAGTTGGCTG TTCCTACATT TGTCACAGTT CTTGAATAAA CTTGAGCTTC TGAGTTGTTT 1167 .......... .......... .......... .......... .......... .......... 425 CTGACTTGAA TTGCGAATGA TGGGTAATTT AGTTGACCTT CTAAGATGCT CGTAATCTCT 1227 .......... .......... .......... .......... .......... .......... 425 GAACAATTAA CTTTGCGCTG CACAATGACA GTAACTTGTC TGTTTGTGTA ATTCAAACCA 1287 .......... .......... .......... .......... .......... .......... 425 CATAAATAAG GTATGTAATC AGATGGCTCA ATATCATATA CCAGGCCAGG ATCATTTGCT 1347 .......... .......... .......... .......... .......... .......... 425 TTTGATGGAT TAACGTGGCC TGCACCTGTG GCAAAGACAT CGGCTGGAAG GTATGTTTCA 1407 .......... .......... .......... .......... .......... .......... 425 TCCTCGATTA ATTTGGATCC GAGGTTAAAG ACATCAGCTG TTGTCATAAT TGCCGACTTA 1467 .......... .......... .......... .......... .......... .......... 425 ATTGCAGCTG GAGACCAATC GGGGTGAACA CTTTTAAGTA GTGCTGCAAC GCCACTGAGG 1527 .......... .......... .......... .......... .......... .......... 425 TGAGGACAAG ACATTGATGT GCCTGCAATC ATGTTGAATG TCGAGTTGGT ATTTGTGTTG 1587 .......... .......... .......... .......... .......... .......... 425 TTCTCCAAGG AAATAGGCCA AGCTGCTAAA ATATTTACAC CAGGACCAAT AATATCCGGT 1647 .......... .......... .......... .......... .......... .......... 425 TTCAGAATTC TAGGACTTGC ATAACTTGGA CCCTGGAAGA AAATCCAGCA ACTACTGGAG 1707 .......... .......... .......... .......... .......... .......... 425 CACGATTATC TCCTATTTAG TTCCCTTGAA CGCGATTGTT GCAGTGGGGG TTGTTGTTGA 1767 .......... .......... .......... .......... .......... .......... 425 GTTTATGTAC TCTTGAATTT TTAGACCATC ACCATAGGTA ACGTGTGTCA CAGGTAGGAC 1827 || | | | | | || .......... .......... .......... .......ATA AAGGATATAA CAT....... 441 ATGTGCTTCA GCTAATGTTG TGTTAGCCCA GGATTCTGGA TTCATAATAA TCATTGCAGC 1887 .......... .......... .......... .......... .......... .......... 441 ACCACCAGCT GCCTTCACTG CTATTCCTTT ATCAACTCCT GCTGTTATAC CAGCCACACA 1947 .......... .......... .......... .......... .......... .......... 441 CAACACAATC TTTCCCATGA CATTCGTGTT GTTCAGCGAA CTAGGGTAAC AATATTGAGC 2007 .......... .......... .......... .......... .......... .......... 441 AAGAGTGTCA CTAGTATTCA TTCCAGGATA GATAAGAGGC AATAGTGTTG AAGGAAAGTG 2067 .......... .......... .......... .......... .......... .......... 441 ACTAGGTTGA AAGGCTGATT CTCCGTCAAA TTTTTGATTG TTTCCAAGCA CAGCAGTGGC 2127 .......... .......... .......... .......... .......... .......... 441 CTTGATTCTC CTATCGATAG TGCTTGCACC AACTGTGAGA ATCCAGGGTG CATCATTAGA 2187 .......... .......... .......... .......... .......... .......... 441 TACTGAAAAA GTGTATGGTC CTGAATTTCC AGCAGAACAG CTGACAAAGA TTCCCCTTTC 2247 .......... .......... .......... .......... .......... .......... 441 TATAGCACTA AATGCACCAA GTGCAATGAC ATCTTCATAG AATTGTCTAG ATCGATTACC 2307 .......... .......... .......... .......... .......... .......... 441 AAGGGAAATT GAAAGTACAT CGACACCATC TTCAATAGCC ATATCCATTG CTGCCAAAAT 2367 .......... .......... .......... .......... .......... .......... 441 ATCGCTCCCA AAACAACCAA TAGCAGAGCA CGTTTTGTAA ATGGCAACAT GAGCGAGAGG 2427 .......... .......... .......... .......... .......... .......... 441 TGCAACACCC ATAGCTGTGC CATTAGCATT GCCTAAAATG TTAGCACCTG GAACGAAACG 2487 .......... .......... .......... .......... .......... .......... 441 TCCAGCTGCT GTGCTAGCAG TATGTGTACC ATGTCCATTT TCGTCCCATG GATCATTCCC 2547 .......... .......... .......... .......... .......... .......... 441 CGTGTAGCTG AAGTACCTCG CACCAATGAG CTTGTTGTTA CACTTAGTGG TATTAAACTG 2607 .......... .......... .......... .......... .......... .......... 441 ACATTTACCC TTCCATTTAG CAGGGGGAGG TGGCATCCCA TCATCGCTAA ACGAAGGGTG 2667 .......... .......... .......... .......... .......... .......... 441 GTCCGGGAAA ATTCCCGTGT CAATAACTCC AATGATCACA CCTTTCCCAT AATTCGAGTC 2727 .......... .......... .......... .......... .......... .......... 441 ATTCCAGAAC CCTATGTTCT GGTTCAACCC CATGAAATTT ACACTATGTG TGGTGTGTAA 2787 .......... .......... .......... .......... .......... .......... 441 ATCAAGTAGC CCCTCGGGGC GTGCAGAGAC AAATCCTTCC ATTTTCTCCA TTTCCTTTAA 2847 .......... .......... .......... .......... .......... .......... 441 ATCTTCTAGT GATAACTTAG CTGCAAAACC TGTTATAACA TTTCGATAGG AATATATCAA 2907 .......... .......... .......... .......... .......... .......... 441 TCGTGGTGCT TCACGAGAAC TATCTGAGGT TGTTGCAGGC AAGAAAGAAA GATAATAGCT 2967 .......... .......... .......... .......... .......... .......... 441 TTCTAAATCT TGATTTCTGG TAGTCCTTTC CCCATCAGGG AACTGACAAT GAACAATATA 3027 .......... .......... .......... .......... .......... .......... 441 GATTTGTGAA TTGTCCTGTT CTGTTGCATT AGTGGTAAAT GGAAAAAGCA CACAAATCAG 3087 .......... .......... .......... .......... .......... .......... 441 CCCAATCATA GTAAGAATTG ATCTGTATTG AGCCATTATA ACTTTAGTGC TAGTGAAAGA 3147 .......... .......... .......... .......... .......... .......... 441 ACTGTCATTT GGTGAGTGTT TTGGAATTTT CATTGAGGGT ATATATACTT ACTGGAAGTA 3207 .......... .......... .......... .......... .......... .......... 441 TAATTTTTTA TTTGCAAGTC AGAAGATATT TAATATAGTC ATGCCTGGAG AGATACACAC 3267 .......... .......... .......... .......... .......... .......... 441 TAAAAACAAT TTTATTCTAT TTAACTTCTC TGTGACAATG AACTTGGCAT AGCAACATCA 3327 .......... .......... .......... .......... .......... .......... 441 TATAAATGAA GTCATTAATC TACAATATAC TTTTTAAGTA ATGTTTGAGT CAACTTGGAT 3387 .......... .......... .......... .......... .......... .......... 441 GCACCTTAAC TAATACATGA GGTGAGTTGT TCACCTCGCA AGTACATGTT ACCAAAGTAA 3447 .......... .......... .......... .......... .......... .......... 441 TCGTGCTCAT AAAAGTTGGA GCAGACAGAC CCCCACACCT TGTGTCGTGG CTGAATTTTT 3507 .......... .......... .......... .......... .......... .......... 441 AACCTGAAAT CTTCAGATGG TTACTCCGAT CACTAGGGCA TTTCCTTTGG AACCAAAATA 3567 .......... .......... .......... .......... .......... .......... 441 AGTCTATAAG TACACCTAAA TTTGAGAGTT GAAAACAAGT TTAATCAATA AAATGACAGA 3627 .......... .......... .......... .......... .......... .......... 441 GAACCACGAG GTTGCAGGTT TGAATCTCGG TGAAGGCAGA AGAAAATTAA TAACACAAGG 3687 .......... .......... .......... .......... .......... .......... 441 ATCCATCTTA ACTAATGGTG AGATTTGTTG CGAGCGTGCA CCTCCCTCCA AATAGGTTCG 3747 .......... .......... .......... .......... .......... .......... 441 ATGTTAGTTA GTTCTATAAA TTTTTAGTTT TGTCATTATT GACAAAATCA AGCATCATTA 3807 .......... .......... .......... .......... .......... .......... 441 CCACTTAATT TGACATTTTG TTTGGACTTA AAATTTTAGA TTCGCGTTTT GGTGACACTA 3867 .......... .......... .......... .......... .......... .......... 441 TCGTCTATCT AGTGTACATC ATTATATTCT CAAAAAGTCA TAGCCTGGAT AACACCTTTT 3927 .......... .......... .......... .......... .......... .......... 441 TAATCTACTA ATCTATACCT TACCATCTAT AATGATTCTA TACCAAAAAT GTCATGGCTG 3987 .......... .......... .......... .......... .......... .......... 441 AGCTCATACT AAAGAATATA GCCAAAAATG TCATGGCTGA GCTCATACTT AAAATATAAC 4047 .......... .......... .......... .......... .......... .......... 441 CGAATATGCC ATGGCTGTGT TACCTTTTAT ATTGCACAAA TTTCCCCATC AGGAAACTCA 4107 .......... .......... .......... .......... .......... .......... 441 CAATGAACAA TATTGATTTG TGAATTGTTC CGTTCAGATT CATTAGTGGT TAATGGAAAG 4167 .......... .......... .......... .......... .......... .......... 441 AGAATACAAA TCAGCCCAAT TATTATTATA ATGAAAAAAA GACAACATAA TATTTGTTTT 4227 .......... .......... .......... .......... .......... .......... 441 TATAGCTATA ACAATATACT CAGTGTAATC TCACAAGTGC GATCTTTAAA GGATATATTT 4287 .......... .......... .......... .......... .......... .......... 441 ACAATGTGAA GACATGACTA AACAAAGTTA ACATCTTGAA GATGGTTTTT TTGCAAATGG 4347 .......... .......... .......... .......... .......... .......... 441 AAATTCTTGA TCAGTATGTC ACTGAGGTCA GCTCCTTCAT TTGTTTCTTC ACAAATAATT 4407 || || | || .......... ....GAT-TC A-AAAG.... .......... .......... .......... 451 GGAAAACCAA ACAGCAATTG GGCTCCTAAC AATATGATAT TCAGAAATCC ATCTGAGAGA 4467 .......... .......... .......... .......... .......... .......... 451 TCCCTGAATA TATATGGTAC TTGGTGTAGC AAAAGGTGTA AATGTCACTG GATAGCTCAA 4527 .......... .......... .......... .......... .......... .......... 451 TTTTCGTTTC ACCTCAGAAA AAAACGAGTC TAGTTGGTTC AACTTTCACA TCAAGGCCTC 4587 .......... .......... .......... .......... .......... .......... 451 ACGGGGGATC ATGTCAACTC GGTATGTTGA GTTGGCTTGT CCTAAGTTTG TTACAGTTCT 4647 .......... .......... .......... .......... .......... .......... 451 TGAATAAACT TGAGCTCCTG AGTTGCTTAT GACTTGAATT GAAAATGATG GATAATTTAG 4707 .......... .......... .......... .......... .......... .......... 451 TTGACCTTCT AAGATGCTCG TAATCTCCGA ACAATTAACT TTGCACTGCA CAATGACAGC 4767 || || | ||| | | .......... .......... .......... .......... ....ACAACA C-GTGATAAC 466 AACTGTCTGT TTGTATAATT CAAACCACAT AAATAAGATA TGTAATCGGA TGGCTCTATA 4827 ||| CACT...... .......... .......... .......... .......... .......... 470 TCATATATCA GGCCGGGATC ATTTGCTTTT GATGGATTAA CATGGCCTGC ACCTGTGGCA 4887 .......... .......... .......... .......... .......... .......... 470 AAGACATCGG CTGGAAGGTA CGTTTCATCC TCGATTAAGT TGGATTTGAG GTTTATGACA 4947 .......... .......... .......... .......... .......... .......... 470 TCGGCTGTTG TCATAATTGC TGACTTAATT CCAGCTGGAG ACCAATCCAG GTGAACACTT 5007 .......... .......... .......... .......... .......... .......... 470 TTTAGTAGCG CTGCAATGTC ACTCAGATGG AGACAAGACA CTGAGGTACC TGAAATTTCA 5067 .......... .......... .......... .......... .......... .......... 470 ATGAAAGCGG AAGAAAATTA GTGAAACAAG AAATCACTCT TGACTAATGG TGAGATTATG 5127 .......... .......... .......... .......... .......... .......... 470 AAAGAGAATT ATAATAATGT TGCAAGCGTG CACCACCCTC CAAATAGGCC TATTGTTAAT 5187 .......... .......... .......... .......... .......... .......... 470 TACTTTTATA ATACAAATAT GCTAGCTTCC AAGTTTTATA AGTTTTGAGA TTTGTCAACA 5247 .......... .......... .......... .......... .......... .......... 470 TTGACAAAAT CAAGCATTAC CAGTTAAATT TGACATTTTG TTTTGAATTA GTTTCATGTT 5307 .......... .......... .......... .......... .......... .......... 470 TGTTTTATTT CATACTAAAC TGAGTACATT TCCAAGAAAA AATCAAGCAT GACAACACCA 5367 .......... .......... .......... .......... .......... .......... 470 GTGGATGCAG TCTTAGTAGC ACATTAGATT TTAAATCGTA ATTTCAAAAG TTTAATGGAA 5427 .......... .......... .......... .......... .......... .......... 470 ATCAAGATGA ATATACTTCC ATATAATTTT TAAATCTACT ATGGCTTAAT AATTTTTTTA 5487 .......... .......... .......... .......... .......... .......... 470 CTAGCTACAA ATCTATACCT TACTAATACA ATAAATTGTA AAACTTCATG GACTATTGTT 5547 .......... .......... .......... .......... .......... .......... 470 GTGCGGAATT TGAGATAATA CGAGAAAATA TAAACGCGAA AAACAAGACA ACAGATTTAC 5607 .......... .......... .......... .......... .......... .......... 470 GTGGTTCACC AATAAATTGG CTACGTCCAC GGGAAGAGAG GGAACAGTTT TATTATGGAG 5667 .......... .......... .......... .......... .......... .......... 470 AGGCAAAAAA CAGAATTACA GAATAGGGTT TCCCATAGCG TCTATATATA GTGCTAAGCT 5727 .......... .......... .......... .......... .......... .......... 470 ACGCCCTAAC AGGCTTGGGC CCAACATACA GAATCAACAG AAAATTAAGG GCCCAATACA 5787 .......... .......... .......... .......... .......... .......... 470 ACAACATTGT ATACTGTCGG GCCGGGGGCG TCTCCGCCCC CCGGACCCCA GGCCAGGGGG 5847 .......... .......... .......... .......... .......... .......... 470 CGCGTCGCCC CCCTGGACCC CCCGACTCGC TGACCGGGCA GCGAGACCCC GTCCTTTCTG 5907 .......... .......... .......... .......... .......... .......... 470 TTTGTAGCGG GTCCAATTCA AGGCATTCAA CAACTATCTT TATTCAGATC CCTTAAAACA 5967 .......... .......... .......... .......... .......... .......... 470 GATACTTGTT GGAAATATTC TCTTGAATTT TGAAATGTTC AATGTGAATA TGAGTTATGT 6027 .......... .......... .......... .......... .......... .......... 470 ATTACATTCT TCAACAGTTT TAGTAGTTCA AAATGTTGTT TTACTAAAAT TATGAGGTTG 6087 .......... .......... .......... .......... .......... .......... 470 TCACCAAATT ATTTAATTTT TTACTTTAAA CTAATTTTTT TCTTTGAAAC ACACTACAAT 6147 .......... .......... .......... .......... .......... .......... 470 TTGCAGGTGC AGACCTTTGC AGGCTTCATG CTGAGCATTT TTATATTGCA CAAATTATTG 6207 || || || |||| | | |||| || ||||| .......... .......... ..TCTACAAC TTGTGCATGA TCA-ATTGAG CACCATATTG 507 AACTTGAGGG AAAAAGAAGT GTTGAAATCT CGATATCTGG TTGACATTTC CTCATCATTA 6267 | |||| | || || || AGGTTGAAGC AACAATGGGT .......... .......... .......... .......... 527 AACTCACTAT GAACAATATA TATTTGTGAA TTGTTCTATT CATATGCATT AGTGGTTAAT 6327 .......... .......... .......... .......... .......... .......... 527 GGAAAGAGCA CATAAATCAG CCCAGTTATA GCGAAAAAGA TAAACATAAT ATTTGTTTTT 6387 .......... .......... .......... .......... .......... .......... 527 ATTGCAAACA ACAAAAATAA CATACTCAGT GTAGTTTTAC AAGTGTGGTC TGTGGAGGGT 6447 .......... .......... .......... .......... .......... .......... 527 GAGGCTGACA AGGTGGGGTG GAACATATGA ACACAAGAGT AAACATATGG GATAATAAAC 6507 .......... .......... .......... .......... .......... .......... 527 CAATGTTAAC ATCTTTAAGA TGGTTTTATT GCAAATGAAA AATCTTGATC AGTATGTCAC 6567 .......... .......... .......... .......... .......... .......... 527 TGAGATCAGC TCCTTCATTT GTTTCTTCAC AAATAATCAG AAAACCAAGC AGCAATTTGG 6627 .......... .......... .......... .......... .......... .......... 527 CTCCTAACAA TGTGGTTTTC AGAAATCCAT CTAAGAGATC CCTGAGTATA TGTAGTACTT 6687 .......... .......... .......... .......... .......... .......... 527 GGTGCAGCAA AAGGTGTAAA TGTTACTTGA TAGCTCAATT TTTGTTTCAC ATCTGAAAAA 6747 .......... .......... .......... .......... .......... .......... 527 ACAAGTGTAG TTGGTTCAAC TTTCACATCA AGGCCTTGCG GTGAATCAAT ATCAACTCGG 6807 .......... .......... .......... .......... .......... .......... 527 TATGTCGAGT TGGCTTGTCC TACATTTGTC ACAGTTCTTG AATATACTTG AACTCCTGAG 6867 .......... .......... .......... .......... .......... .......... 527 TTGCTTTTAA CTTGAATTGC AAACGATGGA TAATTTAGTT GACCTTCTAA GATACTCGTA 6927 .......... .......... .......... .......... .......... .......... 527 ACCTCTGAAC AATTAACTTT GCGCTGCAGA ATGACTGCAA TTTGTCTGTT TGTGTAATTC 6987 .......... .......... .......... .......... .......... .......... 527 AAACCACATA AATAAGGTAA GTAATCAGAT GGCTTGATAT CATATATCAG GCCGGGGGCA 7047 .......... .......... .......... .......... .......... .......... 527 TTTGCTTTTG ATGGATTAAC ATGACCGGCA CCTGTGGCAA AGACATCGGC TGGAAGGTAA 7107 .......... .......... .......... .......... .......... .......... 527 GTTTCGTCCT CGATTAAGTT GGATCCGAGG TTTAAGACAT CGGCTGTTGT CATAATAGCT 7167 .......... .......... .......... .......... .......... .......... 527 GACTTAATTG CAGCTGGAGA CCAATCGGGG TGAACACTTT TTAGTAGTGC TGCAACGCCA 7227 .......... .......... .......... .......... .......... .......... 527 CTGAGGTGAG GACAAGACAT TGAGGTGCCT GAGATCATGT TGAATGTCGA GTTGGTATTT 7287 .......... .......... .......... .......... .......... .......... 527 GTGTTGTTCT CCAAGGAAAC AGGCCAAGCT GCTAAAATGT TAACACCAGG ACCAATAATG 7347 .......... .......... .......... .......... .......... .......... 527 TCCGGTTTCA GAATTCTAGG ACTTACATAA CTTGGACCCC TGGAAGAAAA TCCAGCAACC 7407 .......... .......... .......... .......... .......... .......... 527 ACTGGAGCAC GATTATCTCC GATTGTAGTT CCCTTGAATG CGATTGTTGC AGTGGGGGTT 7467 .......... .......... .......... .......... .......... .......... 527 GTTGTTGAGT TTATGTACGC TTGGATTTTT AGACCATCAG CATAGGTAAC GTGTGTCACG 7527 .......... .......... .......... .......... .......... .......... 527 GGTAGGACAT GTGCTTCAGC AAATGTTGTG TTAGCCCAGG ATTTTGGATT CATAATGATC 7587 .......... .......... .......... .......... .......... .......... 527 ATGGCAGCAC CACCAGCTGC CTTCACTGCT ATTCCTTTAT CAACTGCTCT TGTTATACCA 7647 .......... .......... .......... .......... .......... .......... 527 GCCTCACACA ACACAATCTT TCCCATGACA TTTGTGTTGT TCAGCGAACT AGGGTAACAA 7707 .......... .......... .......... .......... .......... .......... 527 TACTGAGCAA GAATGTCACT ATCATTGCTT CCAGGATAGA TAAGAGGCAA CAGTGTTGAA 7767 .......... .......... .......... .......... .......... .......... 527 GGAAAGTCAC TAGGTTGAAA GGCTGATTCT CCGTCGAATT CTTGATTGTT TCCAAGCACA 7827 .......... .......... .......... .......... .......... .......... 527 GCAGTGGCCT TTATTTTCCT GTCGATAGTG CTTGCACCAA CTGTGAGAAT CCAGGGCGCA 7887 .......... .......... .......... .......... .......... .......... 527 TCATTAGATA CTGAAAAAGT GTATGGTCCT GAATTTCCAG CAGAACAGCT GACAAAGATT 7947 .......... .......... .......... .......... .......... .......... 527 CCCCTTTCCA TAGCACTAAA TGCACCAAGT GCAATGACAT CTTCATAGAA TTGTCTAGAT 8007 .......... .......... .......... .......... .......... .......... 527 CGACTACCAA GGGAAATTGA AAGTATATCG ACACCATCTT CAATAGCCAT ATCCATAGCT 8067 .......... .......... .......... .......... .......... .......... 527 GCCAAAATAT CGCTCCCAAA ACAACCAATA GCAGAGCACG TTTTGTAAAT GGCAACATGA 8127 .......... .......... .......... .......... .......... .......... 527 GCGAGAGGTG CAACACCCAT AGCTGTGCCA TTAGCATTGC CTAAAATGTT AGCACCTGGA 8187 .......... .......... .......... .......... .......... .......... 527 ACGAAACGTC CAGATGCTGT GCTAGCAGTA TGTGTACCAT GTCCATTTTC GTCCCATGGA 8247 .......... .......... .......... .......... .......... .......... 527 TCATTTCCCG TGTAGCTGAA GTACCTCGCA CCAATGAGCT TGTTGTTACA CTTAGTGGTA 8307 .......... .......... .......... .......... .......... .......... 527 TTAAACTGAC ATATACCCTT CCATTTAGCA GGGGGAGGTG GCATCCCATC ATCGCTAAAC 8367 .......... .......... .......... .......... .......... .......... 527 GAAGGGTGGT CCGGGAAAAT TCCCGTGTCA ATAACTCCAA TGATCACACC TTTCCCATAA 8427 .......... .......... .......... .......... .......... .......... 527 TTCGAGTCAT TCCAGAACCC CATGTTCTGG TTCAACCCCA TGAAATTTAC ACTATGTGTG 8487 .......... .......... .......... .......... .......... .......... 527 GTGTGTAAAT CAAGTAGCCC CTCGGGGCGT GCAGAGACAA ATCCTTCCAT TTTCTCCATT 8547 .......... .......... .......... .......... .......... .......... 527 TCCTTTAAAT CTTCTAGTGA TAACTTAGCT GCAAAACCTG TTATAACATT TCGATAGGAA 8607 .......... .......... .......... .......... .......... .......... 527 TATATCAATC GTGGTGCTTC ACGAGAACTA TCTGAGGTTG TTGCAGGCAA GAAAGAAAGA 8667 .......... .......... .......... .......... .......... .......... 527 TAATAGCTTT CCAAATCTTG ATTATTGGTA GATCTTTTCC CATCAGGGAA CTCACAATGA 8727 .......... .......... .......... .......... .......... .......... 527 ACAATATAGA TTTGTGAATT GTCCTGTTCT GTTGCATTAG TGGTAAATGG AAATAGCACA 8787 | .......... .......... .......... .......... .......... ......GAGG 531 CAAATCAGCC CAATTATAGA GAGAATTGAC CTGTATTGAG CCACCATAAC TTAAGTACTA 8847 || ||| || || || |||| || | || AGCATGAGCA TAA-GATGGA GAGAGTTCAA ATGC...... .......... .......... 564 GTGAAACAAC TGGTATTTGG TGATTATTTC TCAGTTTTGA TTGAGGGTAT ATATACTTAC 8907 .......... .......... .......... .......... .......... .......... 564 TGGAAGTTTA CTTTTTTATT TGCAAGTCAG AAGATATTTT AGAAATATGA AATAGTCATG 8967 .......... .......... .......... .......... .......... .......... 564 CCTGAAGATA CACGCTAAGA CGATTTTATT CTATTTAACA TCCTCTGTGA AAATGAACTT 9027 .......... .......... .......... .......... .......... .......... 564 GGCAGAGCAA CATCATATAG ATGAAGTCAT CACTCTAAAA TATACTTTTT AGGTAATATT 9087 |||| || .......... .......... .......... .......... .......... ..ATAATGTT 572 CCAG 9091 || TTAG 576 hqPGS_C08HBa0165B06.1+_SGN-E540411+ (391 702) ******************************************************************************** EST sequence 232 -strand 858 n (File: SGN-E540411-) 1 TACATCAGTA TACGCGATTA ATCGCATGGT GAATACAGAA ACAAAGTTAG GGGATTTGTG 61 TTACCCTCTG GGGTCCAACT CATATTGGCA ACAATGTTAG TGCATCATGA TACTGAAATA 121 TGGGGAGATG ATGCAATGGA GTTTATGCCA GAGAGATTTA GTGAAGGAAT ATCAAAAGCA 181 ACAAAAGGAC AAGTTGTATT TTTTCCATTT AGTTGGGGTC CAAGAATATG TATTGGGCAA 241 AATTTTGCTA TGTTAGAGGC AAAAATGGCA ATGGTCATGA TTCTAAAACA TTATGCATTT 301 GAACTCTCTC CATCTTATGC TCATGCTCCT CACCCATTGT TGCTTCAACC TCAATATGGT 361 GCTCAATTGA TCATGCACAA GTTGTAGAAG TGGTTATCAC GTGTTGTCTT TTGAATCATG 421 TTATATCCTT TATTTATTGT TGGGATAATG TCCAAGTACC CCCTTAGCCT ATGTCCAAAA 481 TCTCAGAGAT ACACTTATAC CATACTAAGA TCTTATTACC CCCTGAACTT ATTTATTAAT 541 AATTTTTTAC CCCTTTTAGA CCTACGTGGC ACTATCTTGT GGGCCCAATG GTTGTTGACT 601 TTTTTTTTAA ACTAGTGCCA CGTAGGCTAA AAAGGGGTAG AAAATTACTT ATAAAATAAG 661 TTCAGGGGGG TAATAGGACC TTAGTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG 721 GTTGAGGGGG TACTTGTGCA TTATCCCTTT ATTGTTCTTT AATTATAGTT CAAGTGAAGT 781 CATATGTTGT TTTGTATAAG ACTGGAGAAT TTTATAATAA TAATATTAGT GTACTTTATG 841 TTTATGAGAA AAAAAAAA Predicted gene structure (within gDNA segment 1 to 2503): Exon 1 391 683 ( 293 n); cDNA 443 736 ( 294 n); score: 0.886 PPA cDNA 847 858 MATCH C08HBa0165B06.1+ SGN-E540411- 0.886 293 0.341 C PGS_C08HBa0165B06.1+_SGN-E540411- (391 683) Alignment (genomic DNA sequence = upper lines): GGATAATGCC CAAGTACCTC CTCAACCTAT GTCCGAAATC TCACAGACAC ACTTATACTA 450 |||||||| | |||||||| | || | ||||| |||| ||||| ||| ||| || |||||||| | GGATAATGTC CAAGTACCCC CTTAGCCTAT GTCCAAAATC TCAGAGATAC ACTTATACCA 502 TACTAAGGTC CTATTCCCCC CTGAACTTAT TTTATTAGTA ACTTTTTACC CCTTTTTAGC 510 ||||||| || |||| |||| ||||||||| ||||||| || | |||||||| |||||| | TACTAAGATC TTATTACCCC CTGAACTTA- TTTATTAATA ATTTTTTACC CCTTTTAGAC 561 TTACGTGGCA CTATCTTGTG GGCTCAACGA TGATTGACTT TTTTTTTCAA ACTAGTGCCA 570 ||||||||| |||||||||| ||| ||| | | ||||||| ||||||| || |||||||||| CTACGTGGCA CTATCTTGTG GGCCCAATGG TTGTTGACTT TTTTTTT-AA ACTAGTGCCA 620 CGTAGGCTAA AAA-GGGTAG AAAATTACAT ATAAAATAAG TTCA--GGGG TAATAGGACC 627 |||||||||| ||| |||||| |||||||| | |||||||||| |||| |||| |||||||||| CGTAGGCTAA AAAGGGGTAG AAAATTACTT ATAAAATAAG TTCAGGGGGG TAATAGGACC 680 TTACTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG GTTGAGGGGG TACTTG 683 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| TTAGTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG GTTGAGGGGG TACTTG 736 hqPGS_C08HBa0165B06.1+_SGN-E540411- (391 683) ******************************************************************************** EST sequence 34 +strand 792 n (File: SGN-E540167+) 1 TTTCTTTTTT TTTTTTTTTT TTTTATTATA ATAGCTTGTG CTTTAATTTC ATAACTATAA 61 CCTTAAATAT CTTTTCATAC ACTCACAAAT ACAAAATCTC CATATATGCA TTATTTTCTC 121 TCATCCCCTT AAATTCATAC AAATGCAAAA CCAAAAAAAA AAATACTATG TTTTTGTTTG 181 GGATAATGCA CAGGTAACCA TTCAACCTAT GCACGAAATC TCAAAGACAC ACTTATACTA 241 TACTAATGTC TTATTATCCC CTGAATTTAT TTTATTAACA ATTTTTCTAC TTCTTTTCAG 301 CCTACGTGGC ACTATCTTGT GGGTCCAACA CTGATTGACT TTTTTTTCAA ATTAGTGTCA 361 CGTAAGTCGA AAAAGAGTAG AAAATTATTT ATAAAATAAG TTCAGAGGGT AATAGGACTT 421 TAGTATAGTA TAAGTGTGTC TCTGGAATTT CGAGCATAGT TTGAGAGGCA GTGCATTTTC 481 CCTATTTATT TCAACAAATT TGTTTTCTAT TTTTTAAACA ACTAAAGTGT TATTTTTATT 541 TAAAAAAAAA AAGAATAATT GTCTGAAGTG GGATCCACAA CATAGTATTG GGCCCATGAA 601 GCTTAATGGG CCCTTTCAGT CCAAACACAC TTCCCAAGAA GATACAGAAA CTCTCACATC 661 AATTTTTTTT TCCTATAAAA ACTCTTTTCC ATTTTTGTGG GGTCTATTAA AAATCAAAAT 721 TCATCCCTAA AGCACAAAGT ACTACTTTTC CCTCCATTCA AAAAAAAAAA AAAAAACCCT 781 AAAAATGGGT TC Predicted gene structure (within gDNA segment 1 to 4670): Exon 1 391 676 ( 286 n); cDNA 181 468 ( 288 n); score: 0.841 PPA cDNA 760 777 MATCH C08HBa0165B06.1+ SGN-E540167+ 0.841 286 0.361 C PGS_C08HBa0165B06.1+_SGN-E540167+ (391 676) Alignment (genomic DNA sequence = upper lines): GGATAATGCC CAAGTACCTC CTCAACCTAT GTCCGAAATC TCACAGACAC ACTTATACTA 450 ||||||||| || ||| | ||||||||| | ||||||| ||| |||||| |||||||||| GGATAATGCA CAGGTAACCA TTCAACCTAT GCACGAAATC TCAAAGACAC ACTTATACTA 240 TACTAAGGTC CTATTCCCCC CTGAACTTAT TTTATTAGTA ACTTTT-TAC CCCTTTTTAG 509 |||||| ||| |||| ||| ||||| |||| ||||||| | | |||| ||| ||||| || TACTAATGTC TTATTATCCC CTGAATTTAT TTTATTAACA ATTTTTCTAC TTCTTTTCAG 300 CTTACGTGGC ACTATCTTGT GGGCTCAACG ATGATTGACT TTTTTTTTCA AACTAGTGCC 569 | |||||||| |||||||||| ||| |||| |||||||| |||||||||| || ||||| | CCTACGTGGC ACTATCTTGT GGGTCCAACA CTGATTGAC- TTTTTTTTCA AATTAGTGTC 359 ACGT-AGGCT AAAAAGGGTA GAAAATTACA TATAAAATAA GTTCAG-GGG TAATAGGACC 627 |||| || | |||||| ||| |||||||| |||||||||| |||||| ||| ||||||||| ACGTAAGTCG AAAAAGAGTA GAAAATTATT TATAAAATAA GTTCAGAGGG TAATAGGACT 419 TTACTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG GTTGAGGGG 676 ||| |||||| |||||||||| |||||||||| ||| |||||| ||||| || TTAGTATAGT ATAAGTGTGT CTCTGGAATT TCGAGCATAG TTTGAGAGG 468 hqPGS_C08HBa0165B06.1+_SGN-E540167+ (391 676) ******************************************************************************** EST sequence 323 -strand 809 n (File: SGN-E543261-) 1 GTATATGTAG TACTGGTGCA GCAAAAGGTG TAAATGTTAC TTGATAGCTC AATTTTTGTT 61 TCACATCTGA AAAAACAAGT GTAGTTGGTT CAACTTTCAC ATCAAGGCCT TGCGGTGAAT 121 CAATATCAAC TCGGTATGTC GAGTTGGCTT GTCCTACATT TGTCACAGTT CTTGAATATA 181 CTTGAACTCC TGAGTTGCTT TTAACTTGAA TTGCAAACGA TGGATAATTT AGTTGACCTT 241 CTAAGATACT CGTAACCTCT GAACAATTAA CTTTGCGCTG CAGAATGACT GCAATTTGTC 301 TGTTTGTGTA ATTCAAACCA CATAAATAAG GTAAGTAATC AGATGGCTTG ATATCATATA 361 TCAGGCCGGG GGCATTTGCT TTTGATGGAT TAACATGACC GGCACCTGTG GCAAAGACAT 421 CGGCTGGAAG GTAAGTTTCG TCCTCGATTA AGTTGGATCC GAGGTTTAAG ACATCGGCTG 481 TTGTCATAAT AGCTGACTTA ATTGCAGCTG GAGACCAATC GGGGTGAACA CTTTTTAGTA 541 GTGCTGCAAC GCCACTGAGG TGAGGACAAG ACATTGAGGT GCCTGAGATC ATGTTGAATG 601 TCGAGTTGGT ATTTGTGTTG TTCTCCAAGG AAACAGGCCA AGCTGCTAAA ATGTTAACAC 661 CAGGACCAAT AATGTCCGGT TTCAGAATTC TAGGACTTAC ATAACTTGGA CCCCTGGAAG 721 AAAATCCAGC AACCACTGGA GCACGATTAT CTCCGATTGT AGTTCCCTTG AATGCGATTG 781 TTGCAGTGGG GGTTGTTGTT GAGTTTATG Predicted gene structure (within gDNA segment 160 to 2374): Exon 1 967 1774 ( 808 n); cDNA 1 809 ( 809 n); score: 0.923 MATCH C08HBa0165B06.1+ SGN-E543261- 0.923 808 0.999 C PGS_C08HBa0165B06.1+_SGN-E543261- (967 1774) Alignment (genomic DNA sequence = upper lines): GTATATATGG TACTTGGTCT AGAAAAAGGT GTAAATGTTA CTTGATAGCT CAATTTTTGT 1026 |||||| | | ||| |||| || ||||||| |||||||||| |||||||||| |||||||||| GTATATGTAG TAC-TGGTGC AGCAAAAGGT GTAAATGTTA CTTGATAGCT CAATTTTTGT 59 TTTACCTTTG AAAAAACAAG TGTAGTTGGT TCAACTTTCA CATCAAGGCC TCGCGGTGAA 1086 || || | || |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TTCACATCTG AAAAAACAAG TGTAGTTGGT TCAACTTTCA CATCAAGGCC TTGCGGTGAA 119 TCAATATCAA CTCGGTATGT TGAGTTGGCT GTTCCTACAT TTGTCACAGT TCTTGAATAA 1146 |||||||||| |||||||||| ||||||||| |||||||| |||||||||| ||||||||| TCAATATCAA CTCGGTATGT CGAGTTGGCT TGTCCTACAT TTGTCACAGT TCTTGAATAT 179 ACTTGAGCTT CTGAGTTGTT TCTGACTTGA ATTGCGAATG ATGGGTAATT TAGTTGACCT 1206 |||||| || |||||||| | | | |||||| ||||| || | |||| ||||| |||||||||| ACTTGAACTC CTGAGTTGCT TTTAACTTGA ATTGCAAACG ATGGATAATT TAGTTGACCT 239 TCTAAGATGC TCGTAATCTC TGAACAATTA ACTTTGCGCT GCACAATGAC AGTAACTTGT 1266 |||||||| | |||||| ||| |||||||||| |||||||||| ||| |||||| | || |||| TCTAAGATAC TCGTAACCTC TGAACAATTA ACTTTGCGCT GCAGAATGAC TGCAATTTGT 299 CTGTTTGTGT AATTCAAACC ACATAAATAA GGTATGTAAT CAGATGGCTC AATATCATAT 1326 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| ||||||||| CTGTTTGTGT AATTCAAACC ACATAAATAA GGTAAGTAAT CAGATGGCTT GATATCATAT 359 ACCAGGCCAG GATCATTTGC TTTTGATGGA TTAACGTGGC CTGCACCTGT GGCAAAGACA 1386 | |||||| | | ||||||| |||||||||| ||||| || | | |||||||| |||||||||| ATCAGGCCGG GGGCATTTGC TTTTGATGGA TTAACATGAC CGGCACCTGT GGCAAAGACA 419 TCGGCTGGAA GGTATGTTTC ATCCTCGATT AATTTGGATC CGAGGTTAAA GACATCAGCT 1446 |||||||||| |||| ||||| ||||||||| || ||||||| ||||||| || |||||| ||| TCGGCTGGAA GGTAAGTTTC GTCCTCGATT AAGTTGGATC CGAGGTTTAA GACATCGGCT 479 GTTGTCATAA TTGCCGACTT AATTGCAGCT GGAGACCAAT CGGGGTGAAC ACTTTTAAGT 1506 |||||||||| | || ||||| |||||||||| |||||||||| |||||||||| |||||| ||| GTTGTCATAA TAGCTGACTT AATTGCAGCT GGAGACCAAT CGGGGTGAAC ACTTTTTAGT 539 AGTGCTGCAA CGCCACTGAG GTGAGGACAA GACATTGATG TGCCTGCAAT CATGTTGAAT 1566 |||||||||| |||||||||| |||||||||| |||||||| | |||||| || |||||||||| AGTGCTGCAA CGCCACTGAG GTGAGGACAA GACATTGAGG TGCCTGAGAT CATGTTGAAT 599 GTCGAGTTGG TATTTGTGTT GTTCTCCAAG GAAATAGGCC AAGCTGCTAA AATATTTACA 1626 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ||| || ||| GTCGAGTTGG TATTTGTGTT GTTCTCCAAG GAAACAGGCC AAGCTGCTAA AATGTTAACA 659 CCAGGACCAA TAATATCCGG TTTCAGAATT CTAGGACTTG CATAACTTGG A-CCCTGGAA 1685 |||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| | |||||||| CCAGGACCAA TAATGTCCGG TTTCAGAATT CTAGGACTTA CATAACTTGG ACCCCTGGAA 719 GAAAATCCAG CAACTACTGG AGCACGATTA TCTCCTATT- TAGTTCCCTT GAACGCGATT 1744 |||||||||| |||| ||||| |||||||||| ||||| ||| |||||||||| ||| |||||| GAAAATCCAG CAACCACTGG AGCACGATTA TCTCCGATTG TAGTTCCCTT GAATGCGATT 779 GTTGCAGTGG GGGTTGTTGT TGAGTTTATG 1774 |||||||||| |||||||||| |||||||||| GTTGCAGTGG GGGTTGTTGT TGAGTTTATG 809 hqPGS_C08HBa0165B06.1+_SGN-E543261- (967 1774) ******************************************************************************** EST sequence 209 -strand 547 n (File: SGN-E303894-) 1 AACAATTAGC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 61 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 121 TTGATGGATT AACATGACCG GCACCTGTGG CAAAGACATC GGCTGGAAGG TAAGTTTCGT 181 CCTCGATTAA GTTGGATCCG AGGTTTAAGA CATCGGCTGT TGTCATAATA GCTGACTTAA 241 TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTTAGTAG TGCTGCAACG CCACTGAGGT 301 GAGGACAAGA CATTGAGGTG CCTGAGATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 361 TCTCCAAGGA AACAGGCCAA GCTGCTAAAA TGTTAACACC AGGACCAATA ATGTCCGGTT 421 TCAGAATTAT AGGACTTACA TAACTTGGAC CCTTGGAAGA AAATCCAGCA ACCACTGGAG 481 CACGATTATC TCCGATTGTA GTTCCCTTGA ATGCGATTGT TGCAGTGGGG GTTGTTGTTG 541 AGTTTAT Predicted gene structure (within gDNA segment 313 to 2373): Exon 1 1229 1773 ( 545 n); cDNA 1 547 ( 547 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E303894- 0.927 545 0.996 C PGS_C08HBa0165B06.1+_SGN-E303894- (1229 1773) Alignment (genomic DNA sequence = upper lines): AACAATTAAC TTTGCGCTGC ACAATGACAG TAACTTGTCT GTTTGTGTAA TTCAAACCAC 1288 |||||||| | |||||||||| | |||||| | || |||||| |||||||||| |||||||||| AACAATTAGC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 60 ATAAATAAGG TATGTAATCA GATGGCTCAA TATCATATAC CAGGCCAGGA TCATTTGCTT 1348 |||||||||| || ||||||| ||||||| | ||||||||| |||||| || ||||||||| ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 120 TTGATGGATT AACGTGGCCT GCACCTGTGG CAAAGACATC GGCTGGAAGG TATGTTTCAT 1408 |||||||||| ||| || || |||||||||| |||||||||| |||||||||| || ||||| | TTGATGGATT AACATGACCG GCACCTGTGG CAAAGACATC GGCTGGAAGG TAAGTTTCGT 180 CCTCGATTAA TTTGGATCCG AGGTTAAAGA CATCAGCTGT TGTCATAATT GCCGACTTAA 1468 |||||||||| ||||||||| ||||| |||| |||| ||||| ||||||||| || ||||||| CCTCGATTAA GTTGGATCCG AGGTTTAAGA CATCGGCTGT TGTCATAATA GCTGACTTAA 240 TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTAAGTAG TGCTGCAACG CCACTGAGGT 1528 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTTAGTAG TGCTGCAACG CCACTGAGGT 300 GAGGACAAGA CATTGATGTG CCTGCAATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 1588 |||||||||| |||||| ||| |||| |||| |||||||||| |||||||||| |||||||||| GAGGACAAGA CATTGAGGTG CCTGAGATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 360 TCTCCAAGGA AATAGGCCAA GCTGCTAAAA TATTTACACC AGGACCAATA ATATCCGGTT 1648 |||||||||| || ||||||| |||||||||| | || ||||| |||||||||| || ||||||| TCTCCAAGGA AACAGGCCAA GCTGCTAAAA TGTTAACACC AGGACCAATA ATGTCCGGTT 420 TCAGAATTCT AGGACTTGCA TAACTTGGAC CC-TGGAAGA AAATCCAGCA ACTACTGGAG 1707 |||||||| | ||||||| || |||||||||| || ||||||| |||||||||| || ||||||| TCAGAATTAT AGGACTTACA TAACTTGGAC CCTTGGAAGA AAATCCAGCA ACCACTGGAG 480 CACGATTATC TCCTATT-TA GTTCCCTTGA ACGCGATTGT TGCAGTGGGG GTTGTTGTTG 1766 |||||||||| ||| ||| || |||||||||| | |||||||| |||||||||| |||||||||| CACGATTATC TCCGATTGTA GTTCCCTTGA ATGCGATTGT TGCAGTGGGG GTTGTTGTTG 540 AGTTTAT 1773 ||||||| AGTTTAT 547 hqPGS_C08HBa0165B06.1+_SGN-E303894- (1229 1773) ******************************************************************************** EST sequence 400 -strand 641 n (File: SGN-E301078-) 1 ATATGTAAAT TGTAATGAAT AATAAAATGT AACAATTACA AAATTCAAAG ACATACGACA 61 ATAAATCATT CATAGAAAAC TAAATTAAGA AGTCTAACAG AGTGAAAAAA AAGACTAAAA 121 GAAACAGAAT ATTTAAGAAA AAAATACAAT ATAGACATTA TTCTTATAAG ATTGATGTAT 181 ATATAGATGA AAAAATAAGT AAAAATTAGT ACATAACTCT CTGAGTTTTT ATCGACTCCT 241 TTCATATCCT ATCAAAATTC AAGAGTTTTC AGCATCTATT TTTACTATAG AATAAAAATA 301 ATAATCTTGA TAGGGGTTTC ATGAGATAAA GAAGTTGAAT TTATACAAAT AGAATAGAAG 361 GAATACCAAA AGATATCTTA AAGTTTAATT TAAATATTTG GAGGTTATGA ATATGAAAAG 421 ATGATAGTTA TGAATATTAA GAGTGTTGTG CGAAATTTGA GATAATACGA GAAAATATAT 481 AAACGCGAAA ACCAAGACAC CAGTTTTACG TGGTTCACCA ATAAATTGGC TACGTCCACG 541 GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA ATAGGGTTTG 601 CCATAGCGTC TATATATAGT GCTAAGCTAC ACCCTAAAAG G Predicted gene structure (within gDNA segment 1 to 6439): Exon 1 1805 1820 ( 16 n); cDNA 427 441 ( 15 n); score: 0.562 Intron 1 1821 5541 (3721 n); Pd: 0.339 (s: 0), Pa: 0.000 (s: 0.85) Exon 2 5542 5740 ( 199 n); cDNA 442 641 ( 200 n); score: 0.920 MATCH C08HBa0165B06.1+ SGN-E301078- 0.920 215 0.335 C PGS_C08HBa0165B06.1+_SGN-E301078- (1805 1820,5542 5740) Alignment (genomic DNA sequence = upper lines): GTAACGTGTG TCACAGGTAG GACATGTGCT TCAGCTAATG TTGTGTTAGC CCAGGATTCT 1864 || | | | | | || GTTATGAATA TTA-AG.... .......... .......... .......... .......... 441 GGATTCATAA TAATCATTGC AGCACCACCA GCTGCCTTCA CTGCTATTCC TTTATCAACT 1924 .......... .......... .......... .......... .......... .......... 441 CCTGCTGTTA TACCAGCCAC ACACAACACA ATCTTTCCCA TGACATTCGT GTTGTTCAGC 1984 .......... .......... .......... .......... .......... .......... 441 GAACTAGGGT AACAATATTG AGCAAGAGTG TCACTAGTAT TCATTCCAGG ATAGATAAGA 2044 .......... .......... .......... .......... .......... .......... 441 GGCAATAGTG TTGAAGGAAA GTGACTAGGT TGAAAGGCTG ATTCTCCGTC AAATTTTTGA 2104 .......... .......... .......... .......... .......... .......... 441 TTGTTTCCAA GCACAGCAGT GGCCTTGATT CTCCTATCGA TAGTGCTTGC ACCAACTGTG 2164 .......... .......... .......... .......... .......... .......... 441 AGAATCCAGG GTGCATCATT AGATACTGAA AAAGTGTATG GTCCTGAATT TCCAGCAGAA 2224 .......... .......... .......... .......... .......... .......... 441 CAGCTGACAA AGATTCCCCT TTCTATAGCA CTAAATGCAC CAAGTGCAAT GACATCTTCA 2284 .......... .......... .......... .......... .......... .......... 441 TAGAATTGTC TAGATCGATT ACCAAGGGAA ATTGAAAGTA CATCGACACC ATCTTCAATA 2344 .......... .......... .......... .......... .......... .......... 441 GCCATATCCA TTGCTGCCAA AATATCGCTC CCAAAACAAC CAATAGCAGA GCACGTTTTG 2404 .......... .......... .......... .......... .......... .......... 441 TAAATGGCAA CATGAGCGAG AGGTGCAACA CCCATAGCTG TGCCATTAGC ATTGCCTAAA 2464 .......... .......... .......... .......... .......... .......... 441 ATGTTAGCAC CTGGAACGAA ACGTCCAGCT GCTGTGCTAG CAGTATGTGT ACCATGTCCA 2524 .......... .......... .......... .......... .......... .......... 441 TTTTCGTCCC ATGGATCATT CCCCGTGTAG CTGAAGTACC TCGCACCAAT GAGCTTGTTG 2584 .......... .......... .......... .......... .......... .......... 441 TTACACTTAG TGGTATTAAA CTGACATTTA CCCTTCCATT TAGCAGGGGG AGGTGGCATC 2644 .......... .......... .......... .......... .......... .......... 441 CCATCATCGC TAAACGAAGG GTGGTCCGGG AAAATTCCCG TGTCAATAAC TCCAATGATC 2704 .......... .......... .......... .......... .......... .......... 441 ACACCTTTCC CATAATTCGA GTCATTCCAG AACCCTATGT TCTGGTTCAA CCCCATGAAA 2764 .......... .......... .......... .......... .......... .......... 441 TTTACACTAT GTGTGGTGTG TAAATCAAGT AGCCCCTCGG GGCGTGCAGA GACAAATCCT 2824 .......... .......... .......... .......... .......... .......... 441 TCCATTTTCT CCATTTCCTT TAAATCTTCT AGTGATAACT TAGCTGCAAA ACCTGTTATA 2884 .......... .......... .......... .......... .......... .......... 441 ACATTTCGAT AGGAATATAT CAATCGTGGT GCTTCACGAG AACTATCTGA GGTTGTTGCA 2944 .......... .......... .......... .......... .......... .......... 441 GGCAAGAAAG AAAGATAATA GCTTTCTAAA TCTTGATTTC TGGTAGTCCT TTCCCCATCA 3004 .......... .......... .......... .......... .......... .......... 441 GGGAACTGAC AATGAACAAT ATAGATTTGT GAATTGTCCT GTTCTGTTGC ATTAGTGGTA 3064 .......... .......... .......... .......... .......... .......... 441 AATGGAAAAA GCACACAAAT CAGCCCAATC ATAGTAAGAA TTGATCTGTA TTGAGCCATT 3124 .......... .......... .......... .......... .......... .......... 441 ATAACTTTAG TGCTAGTGAA AGAACTGTCA TTTGGTGAGT GTTTTGGAAT TTTCATTGAG 3184 .......... .......... .......... .......... .......... .......... 441 GGTATATATA CTTACTGGAA GTATAATTTT TTATTTGCAA GTCAGAAGAT ATTTAATATA 3244 .......... .......... .......... .......... .......... .......... 441 GTCATGCCTG GAGAGATACA CACTAAAAAC AATTTTATTC TATTTAACTT CTCTGTGACA 3304 .......... .......... .......... .......... .......... .......... 441 ATGAACTTGG CATAGCAACA TCATATAAAT GAAGTCATTA ATCTACAATA TACTTTTTAA 3364 .......... .......... .......... .......... .......... .......... 441 GTAATGTTTG AGTCAACTTG GATGCACCTT AACTAATACA TGAGGTGAGT TGTTCACCTC 3424 .......... .......... .......... .......... .......... .......... 441 GCAAGTACAT GTTACCAAAG TAATCGTGCT CATAAAAGTT GGAGCAGACA GACCCCCACA 3484 .......... .......... .......... .......... .......... .......... 441 CCTTGTGTCG TGGCTGAATT TTTAACCTGA AATCTTCAGA TGGTTACTCC GATCACTAGG 3544 .......... .......... .......... .......... .......... .......... 441 GCATTTCCTT TGGAACCAAA ATAAGTCTAT AAGTACACCT AAATTTGAGA GTTGAAAACA 3604 .......... .......... .......... .......... .......... .......... 441 AGTTTAATCA ATAAAATGAC AGAGAACCAC GAGGTTGCAG GTTTGAATCT CGGTGAAGGC 3664 .......... .......... .......... .......... .......... .......... 441 AGAAGAAAAT TAATAACACA AGGATCCATC TTAACTAATG GTGAGATTTG TTGCGAGCGT 3724 .......... .......... .......... .......... .......... .......... 441 GCACCTCCCT CCAAATAGGT TCGATGTTAG TTAGTTCTAT AAATTTTTAG TTTTGTCATT 3784 .......... .......... .......... .......... .......... .......... 441 ATTGACAAAA TCAAGCATCA TTACCACTTA ATTTGACATT TTGTTTGGAC TTAAAATTTT 3844 .......... .......... .......... .......... .......... .......... 441 AGATTCGCGT TTTGGTGACA CTATCGTCTA TCTAGTGTAC ATCATTATAT TCTCAAAAAG 3904 .......... .......... .......... .......... .......... .......... 441 TCATAGCCTG GATAACACCT TTTTAATCTA CTAATCTATA CCTTACCATC TATAATGATT 3964 .......... .......... .......... .......... .......... .......... 441 CTATACCAAA AATGTCATGG CTGAGCTCAT ACTAAAGAAT ATAGCCAAAA ATGTCATGGC 4024 .......... .......... .......... .......... .......... .......... 441 TGAGCTCATA CTTAAAATAT AACCGAATAT GCCATGGCTG TGTTACCTTT TATATTGCAC 4084 .......... .......... .......... .......... .......... .......... 441 AAATTTCCCC ATCAGGAAAC TCACAATGAA CAATATTGAT TTGTGAATTG TTCCGTTCAG 4144 .......... .......... .......... .......... .......... .......... 441 ATTCATTAGT GGTTAATGGA AAGAGAATAC AAATCAGCCC AATTATTATT ATAATGAAAA 4204 .......... .......... .......... .......... .......... .......... 441 AAAGACAACA TAATATTTGT TTTTATAGCT ATAACAATAT ACTCAGTGTA ATCTCACAAG 4264 .......... .......... .......... .......... .......... .......... 441 TGCGATCTTT AAAGGATATA TTTACAATGT GAAGACATGA CTAAACAAAG TTAACATCTT 4324 .......... .......... .......... .......... .......... .......... 441 GAAGATGGTT TTTTTGCAAA TGGAAATTCT TGATCAGTAT GTCACTGAGG TCAGCTCCTT 4384 .......... .......... .......... .......... .......... .......... 441 CATTTGTTTC TTCACAAATA ATTGGAAAAC CAAACAGCAA TTGGGCTCCT AACAATATGA 4444 .......... .......... .......... .......... .......... .......... 441 TATTCAGAAA TCCATCTGAG AGATCCCTGA ATATATATGG TACTTGGTGT AGCAAAAGGT 4504 .......... .......... .......... .......... .......... .......... 441 GTAAATGTCA CTGGATAGCT CAATTTTCGT TTCACCTCAG AAAAAAACGA GTCTAGTTGG 4564 .......... .......... .......... .......... .......... .......... 441 TTCAACTTTC ACATCAAGGC CTCACGGGGG ATCATGTCAA CTCGGTATGT TGAGTTGGCT 4624 .......... .......... .......... .......... .......... .......... 441 TGTCCTAAGT TTGTTACAGT TCTTGAATAA ACTTGAGCTC CTGAGTTGCT TATGACTTGA 4684 .......... .......... .......... .......... .......... .......... 441 ATTGAAAATG ATGGATAATT TAGTTGACCT TCTAAGATGC TCGTAATCTC CGAACAATTA 4744 .......... .......... .......... .......... .......... .......... 441 ACTTTGCACT GCACAATGAC AGCAACTGTC TGTTTGTATA ATTCAAACCA CATAAATAAG 4804 .......... .......... .......... .......... .......... .......... 441 ATATGTAATC GGATGGCTCT ATATCATATA TCAGGCCGGG ATCATTTGCT TTTGATGGAT 4864 .......... .......... .......... .......... .......... .......... 441 TAACATGGCC TGCACCTGTG GCAAAGACAT CGGCTGGAAG GTACGTTTCA TCCTCGATTA 4924 .......... .......... .......... .......... .......... .......... 441 AGTTGGATTT GAGGTTTATG ACATCGGCTG TTGTCATAAT TGCTGACTTA ATTCCAGCTG 4984 .......... .......... .......... .......... .......... .......... 441 GAGACCAATC CAGGTGAACA CTTTTTAGTA GCGCTGCAAT GTCACTCAGA TGGAGACAAG 5044 .......... .......... .......... .......... .......... .......... 441 ACACTGAGGT ACCTGAAATT TCAATGAAAG CGGAAGAAAA TTAGTGAAAC AAGAAATCAC 5104 .......... .......... .......... .......... .......... .......... 441 TCTTGACTAA TGGTGAGATT ATGAAAGAGA ATTATAATAA TGTTGCAAGC GTGCACCACC 5164 .......... .......... .......... .......... .......... .......... 441 CTCCAAATAG GCCTATTGTT AATTACTTTT ATAATACAAA TATGCTAGCT TCCAAGTTTT 5224 .......... .......... .......... .......... .......... .......... 441 ATAAGTTTTG AGATTTGTCA ACATTGACAA AATCAAGCAT TACCAGTTAA ATTTGACATT 5284 .......... .......... .......... .......... .......... .......... 441 TTGTTTTGAA TTAGTTTCAT GTTTGTTTTA TTTCATACTA AACTGAGTAC ATTTCCAAGA 5344 .......... .......... .......... .......... .......... .......... 441 AAAAATCAAG CATGACAACA CCAGTGGATG CAGTCTTAGT AGCACATTAG ATTTTAAATC 5404 .......... .......... .......... .......... .......... .......... 441 GTAATTTCAA AAGTTTAATG GAAATCAAGA TGAATATACT TCCATATAAT TTTTAAATCT 5464 .......... .......... .......... .......... .......... .......... 441 ACTATGGCTT AATAATTTTT TTACTAGCTA CAAATCTATA CCTTACTAAT ACAATAAATT 5524 .......... .......... .......... .......... .......... .......... 441 GTAAAACTTC ATGGACTATT GTTGTGCGGA ATTTGAGATA ATACGAGAAA ATATA-AA-C 5582 | | |||||||| | |||||||||| |||||||||| ||||| || | .......... .......AGT GTTGTGCGAA ATTTGAGATA ATACGAGAAA ATATATAAAC 484 GCGAAAAACA AGACAACAGA TTTACGTGGT TCACCAATAA ATTGGCTACG TCCACGGGAA 5642 ||||||| || ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GCGAAAACCA AGACACCAGT TTTACGTGGT TCACCAATAA ATTGGCTACG TCCACGGGAA 544 GAGAGGGAAC AGTTTTATTA TGGAGAGGCA AAAAACAGAA TTACAGAATA GGGTTTCCCA 5702 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| GAGAGGGAGC AATTTTATTA TGGAGAGGC- AAAAACAGAA TTACAGAATA GGGTTTGCCA 603 TAGCGTCTAT ATATAGTGCT AAGCTACGCC CTAACAGG 5740 |||||||||| |||||||||| ||||||| || |||| ||| TAGCGTCTAT ATATAGTGCT AAGCTACACC CTAAAAGG 641 hqPGS_C08HBa0165B06.1+_SGN-E301078- (5542 5740) ******************************************************************************** EST sequence 402 -strand 575 n (File: SGN-E301194-) 1 CATTCATAGA AAACTAAATT AAGAAGTCTA ACAGAGTGAA AAAAAAGACT AAAAGAAACA 61 GAATATTTAA GAAAAAAATA CAATATAGAC ATTATTCTTA TAAGATTGAT GTATATATAG 121 ATGAAAAAAT AAGTAAAAAT TAGTACATAA CTCTCTGAGT TTTTATCGAC TCCTTTCATA 181 TCCTATCAAA ATTCAAGAGT TTTCAGCATC TATTTTTACT ATAGAATAAA AATAATAATC 241 TTGATAGGGG TTTCATGAGA TAAAGAAGTT GAATTTATAC AAATAGAATA GAAGGAATAC 301 CAAAAGATTT CTTAAAGTTT AATTTAAATA TTTGGAGGTT ATGAATATGA AAAGATGATA 361 GTTATGAATA TTAAGAGTGT TGTGCGAAAT TTGAGATAAT ACGAGAAAAT ATATAAACGC 421 GAAAAACAAG ACAACAGATT TACGTGGTTC ACCAATAAAT TGGCTACGTC CACGGGAAGA 481 GAGGGAGCAA TTTTATTATG GAGAGGCAAA AACAGAATTA CAGAATAGGG TTTGCCATAG 541 CGTCTATATA TAGTGCTAAG CTACGCCCTA AAAGG Predicted gene structure (within gDNA segment 1074 to 6376): Exon 1 1805 1820 ( 16 n); cDNA 361 375 ( 15 n); score: 0.562 Intron 1 1821 5541 (3721 n); Pd: 0.339 (s: 0), Pa: 0.000 (s: 0.85) Exon 2 5542 5740 ( 199 n); cDNA 376 575 ( 200 n); score: 0.940 MATCH C08HBa0165B06.1+ SGN-E301194- 0.940 215 0.374 C PGS_C08HBa0165B06.1+_SGN-E301194- (1805 1820,5542 5740) Alignment (genomic DNA sequence = upper lines): GTAACGTGTG TCACAGGTAG GACATGTGCT TCAGCTAATG TTGTGTTAGC CCAGGATTCT 1864 || | | | | | || GTTATGAATA TTA-AG.... .......... .......... .......... .......... 375 GGATTCATAA TAATCATTGC AGCACCACCA GCTGCCTTCA CTGCTATTCC TTTATCAACT 1924 .......... .......... .......... .......... .......... .......... 375 CCTGCTGTTA TACCAGCCAC ACACAACACA ATCTTTCCCA TGACATTCGT GTTGTTCAGC 1984 .......... .......... .......... .......... .......... .......... 375 GAACTAGGGT AACAATATTG AGCAAGAGTG TCACTAGTAT TCATTCCAGG ATAGATAAGA 2044 .......... .......... .......... .......... .......... .......... 375 GGCAATAGTG TTGAAGGAAA GTGACTAGGT TGAAAGGCTG ATTCTCCGTC AAATTTTTGA 2104 .......... .......... .......... .......... .......... .......... 375 TTGTTTCCAA GCACAGCAGT GGCCTTGATT CTCCTATCGA TAGTGCTTGC ACCAACTGTG 2164 .......... .......... .......... .......... .......... .......... 375 AGAATCCAGG GTGCATCATT AGATACTGAA AAAGTGTATG GTCCTGAATT TCCAGCAGAA 2224 .......... .......... .......... .......... .......... .......... 375 CAGCTGACAA AGATTCCCCT TTCTATAGCA CTAAATGCAC CAAGTGCAAT GACATCTTCA 2284 .......... .......... .......... .......... .......... .......... 375 TAGAATTGTC TAGATCGATT ACCAAGGGAA ATTGAAAGTA CATCGACACC ATCTTCAATA 2344 .......... .......... .......... .......... .......... .......... 375 GCCATATCCA TTGCTGCCAA AATATCGCTC CCAAAACAAC CAATAGCAGA GCACGTTTTG 2404 .......... .......... .......... .......... .......... .......... 375 TAAATGGCAA CATGAGCGAG AGGTGCAACA CCCATAGCTG TGCCATTAGC ATTGCCTAAA 2464 .......... .......... .......... .......... .......... .......... 375 ATGTTAGCAC CTGGAACGAA ACGTCCAGCT GCTGTGCTAG CAGTATGTGT ACCATGTCCA 2524 .......... .......... .......... .......... .......... .......... 375 TTTTCGTCCC ATGGATCATT CCCCGTGTAG CTGAAGTACC TCGCACCAAT GAGCTTGTTG 2584 .......... .......... .......... .......... .......... .......... 375 TTACACTTAG TGGTATTAAA CTGACATTTA CCCTTCCATT TAGCAGGGGG AGGTGGCATC 2644 .......... .......... .......... .......... .......... .......... 375 CCATCATCGC TAAACGAAGG GTGGTCCGGG AAAATTCCCG TGTCAATAAC TCCAATGATC 2704 .......... .......... .......... .......... .......... .......... 375 ACACCTTTCC CATAATTCGA GTCATTCCAG AACCCTATGT TCTGGTTCAA CCCCATGAAA 2764 .......... .......... .......... .......... .......... .......... 375 TTTACACTAT GTGTGGTGTG TAAATCAAGT AGCCCCTCGG GGCGTGCAGA GACAAATCCT 2824 .......... .......... .......... .......... .......... .......... 375 TCCATTTTCT CCATTTCCTT TAAATCTTCT AGTGATAACT TAGCTGCAAA ACCTGTTATA 2884 .......... .......... .......... .......... .......... .......... 375 ACATTTCGAT AGGAATATAT CAATCGTGGT GCTTCACGAG AACTATCTGA GGTTGTTGCA 2944 .......... .......... .......... .......... .......... .......... 375 GGCAAGAAAG AAAGATAATA GCTTTCTAAA TCTTGATTTC TGGTAGTCCT TTCCCCATCA 3004 .......... .......... .......... .......... .......... .......... 375 GGGAACTGAC AATGAACAAT ATAGATTTGT GAATTGTCCT GTTCTGTTGC ATTAGTGGTA 3064 .......... .......... .......... .......... .......... .......... 375 AATGGAAAAA GCACACAAAT CAGCCCAATC ATAGTAAGAA TTGATCTGTA TTGAGCCATT 3124 .......... .......... .......... .......... .......... .......... 375 ATAACTTTAG TGCTAGTGAA AGAACTGTCA TTTGGTGAGT GTTTTGGAAT TTTCATTGAG 3184 .......... .......... .......... .......... .......... .......... 375 GGTATATATA CTTACTGGAA GTATAATTTT TTATTTGCAA GTCAGAAGAT ATTTAATATA 3244 .......... .......... .......... .......... .......... .......... 375 GTCATGCCTG GAGAGATACA CACTAAAAAC AATTTTATTC TATTTAACTT CTCTGTGACA 3304 .......... .......... .......... .......... .......... .......... 375 ATGAACTTGG CATAGCAACA TCATATAAAT GAAGTCATTA ATCTACAATA TACTTTTTAA 3364 .......... .......... .......... .......... .......... .......... 375 GTAATGTTTG AGTCAACTTG GATGCACCTT AACTAATACA TGAGGTGAGT TGTTCACCTC 3424 .......... .......... .......... .......... .......... .......... 375 GCAAGTACAT GTTACCAAAG TAATCGTGCT CATAAAAGTT GGAGCAGACA GACCCCCACA 3484 .......... .......... .......... .......... .......... .......... 375 CCTTGTGTCG TGGCTGAATT TTTAACCTGA AATCTTCAGA TGGTTACTCC GATCACTAGG 3544 .......... .......... .......... .......... .......... .......... 375 GCATTTCCTT TGGAACCAAA ATAAGTCTAT AAGTACACCT AAATTTGAGA GTTGAAAACA 3604 .......... .......... .......... .......... .......... .......... 375 AGTTTAATCA ATAAAATGAC AGAGAACCAC GAGGTTGCAG GTTTGAATCT CGGTGAAGGC 3664 .......... .......... .......... .......... .......... .......... 375 AGAAGAAAAT TAATAACACA AGGATCCATC TTAACTAATG GTGAGATTTG TTGCGAGCGT 3724 .......... .......... .......... .......... .......... .......... 375 GCACCTCCCT CCAAATAGGT TCGATGTTAG TTAGTTCTAT AAATTTTTAG TTTTGTCATT 3784 .......... .......... .......... .......... .......... .......... 375 ATTGACAAAA TCAAGCATCA TTACCACTTA ATTTGACATT TTGTTTGGAC TTAAAATTTT 3844 .......... .......... .......... .......... .......... .......... 375 AGATTCGCGT TTTGGTGACA CTATCGTCTA TCTAGTGTAC ATCATTATAT TCTCAAAAAG 3904 .......... .......... .......... .......... .......... .......... 375 TCATAGCCTG GATAACACCT TTTTAATCTA CTAATCTATA CCTTACCATC TATAATGATT 3964 .......... .......... .......... .......... .......... .......... 375 CTATACCAAA AATGTCATGG CTGAGCTCAT ACTAAAGAAT ATAGCCAAAA ATGTCATGGC 4024 .......... .......... .......... .......... .......... .......... 375 TGAGCTCATA CTTAAAATAT AACCGAATAT GCCATGGCTG TGTTACCTTT TATATTGCAC 4084 .......... .......... .......... .......... .......... .......... 375 AAATTTCCCC ATCAGGAAAC TCACAATGAA CAATATTGAT TTGTGAATTG TTCCGTTCAG 4144 .......... .......... .......... .......... .......... .......... 375 ATTCATTAGT GGTTAATGGA AAGAGAATAC AAATCAGCCC AATTATTATT ATAATGAAAA 4204 .......... .......... .......... .......... .......... .......... 375 AAAGACAACA TAATATTTGT TTTTATAGCT ATAACAATAT ACTCAGTGTA ATCTCACAAG 4264 .......... .......... .......... .......... .......... .......... 375 TGCGATCTTT AAAGGATATA TTTACAATGT GAAGACATGA CTAAACAAAG TTAACATCTT 4324 .......... .......... .......... .......... .......... .......... 375 GAAGATGGTT TTTTTGCAAA TGGAAATTCT TGATCAGTAT GTCACTGAGG TCAGCTCCTT 4384 .......... .......... .......... .......... .......... .......... 375 CATTTGTTTC TTCACAAATA ATTGGAAAAC CAAACAGCAA TTGGGCTCCT AACAATATGA 4444 .......... .......... .......... .......... .......... .......... 375 TATTCAGAAA TCCATCTGAG AGATCCCTGA ATATATATGG TACTTGGTGT AGCAAAAGGT 4504 .......... .......... .......... .......... .......... .......... 375 GTAAATGTCA CTGGATAGCT CAATTTTCGT TTCACCTCAG AAAAAAACGA GTCTAGTTGG 4564 .......... .......... .......... .......... .......... .......... 375 TTCAACTTTC ACATCAAGGC CTCACGGGGG ATCATGTCAA CTCGGTATGT TGAGTTGGCT 4624 .......... .......... .......... .......... .......... .......... 375 TGTCCTAAGT TTGTTACAGT TCTTGAATAA ACTTGAGCTC CTGAGTTGCT TATGACTTGA 4684 .......... .......... .......... .......... .......... .......... 375 ATTGAAAATG ATGGATAATT TAGTTGACCT TCTAAGATGC TCGTAATCTC CGAACAATTA 4744 .......... .......... .......... .......... .......... .......... 375 ACTTTGCACT GCACAATGAC AGCAACTGTC TGTTTGTATA ATTCAAACCA CATAAATAAG 4804 .......... .......... .......... .......... .......... .......... 375 ATATGTAATC GGATGGCTCT ATATCATATA TCAGGCCGGG ATCATTTGCT TTTGATGGAT 4864 .......... .......... .......... .......... .......... .......... 375 TAACATGGCC TGCACCTGTG GCAAAGACAT CGGCTGGAAG GTACGTTTCA TCCTCGATTA 4924 .......... .......... .......... .......... .......... .......... 375 AGTTGGATTT GAGGTTTATG ACATCGGCTG TTGTCATAAT TGCTGACTTA ATTCCAGCTG 4984 .......... .......... .......... .......... .......... .......... 375 GAGACCAATC CAGGTGAACA CTTTTTAGTA GCGCTGCAAT GTCACTCAGA TGGAGACAAG 5044 .......... .......... .......... .......... .......... .......... 375 ACACTGAGGT ACCTGAAATT TCAATGAAAG CGGAAGAAAA TTAGTGAAAC AAGAAATCAC 5104 .......... .......... .......... .......... .......... .......... 375 TCTTGACTAA TGGTGAGATT ATGAAAGAGA ATTATAATAA TGTTGCAAGC GTGCACCACC 5164 .......... .......... .......... .......... .......... .......... 375 CTCCAAATAG GCCTATTGTT AATTACTTTT ATAATACAAA TATGCTAGCT TCCAAGTTTT 5224 .......... .......... .......... .......... .......... .......... 375 ATAAGTTTTG AGATTTGTCA ACATTGACAA AATCAAGCAT TACCAGTTAA ATTTGACATT 5284 .......... .......... .......... .......... .......... .......... 375 TTGTTTTGAA TTAGTTTCAT GTTTGTTTTA TTTCATACTA AACTGAGTAC ATTTCCAAGA 5344 .......... .......... .......... .......... .......... .......... 375 AAAAATCAAG CATGACAACA CCAGTGGATG CAGTCTTAGT AGCACATTAG ATTTTAAATC 5404 .......... .......... .......... .......... .......... .......... 375 GTAATTTCAA AAGTTTAATG GAAATCAAGA TGAATATACT TCCATATAAT TTTTAAATCT 5464 .......... .......... .......... .......... .......... .......... 375 ACTATGGCTT AATAATTTTT TTACTAGCTA CAAATCTATA CCTTACTAAT ACAATAAATT 5524 .......... .......... .......... .......... .......... .......... 375 GTAAAACTTC ATGGACTATT GTTGTGCGGA ATTTGAGATA ATACGAGAAA ATAT--AAAC 5582 | | |||||||| | |||||||||| |||||||||| |||| |||| .......... .......AGT GTTGTGCGAA ATTTGAGATA ATACGAGAAA ATATATAAAC 418 GCGAAAAACA AGACAACAGA TTTACGTGGT TCACCAATAA ATTGGCTACG TCCACGGGAA 5642 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGAAAAACA AGACAACAGA TTTACGTGGT TCACCAATAA ATTGGCTACG TCCACGGGAA 478 GAGAGGGAAC AGTTTTATTA TGGAGAGGCA AAAAACAGAA TTACAGAATA GGGTTTCCCA 5702 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| GAGAGGGAGC AATTTTATTA TGGAGAGGC- AAAAACAGAA TTACAGAATA GGGTTTGCCA 537 TAGCGTCTAT ATATAGTGCT AAGCTACGCC CTAACAGG 5740 |||||||||| |||||||||| |||||||||| |||| ||| TAGCGTCTAT ATATAGTGCT AAGCTACGCC CTAAAAGG 575 hqPGS_C08HBa0165B06.1+_SGN-E301194- (5542 5740) ******************************************************************************** EST sequence 84 +strand 748 n (File: SGN-E543260+) 1 GGGCCCCCCT CGAGTTTTTT TTTTTTTTTT TTTTTAACAT AATATTTGTT TTTATTGCAA 61 ACAACAAAAA TAACATACTC AGTGTAGTTT TACAAGTGTG GTCTGTGGAG GGTGAGGCTG 121 ACAAGGTGGG GTGGAACATA TGAACACAAG AGTAAACATA TGGGATAATA AACCAATGTT 181 AACATCTTTA AGATGGTTTT ATTGCAAATG AAAAATCTTG ATCAGTATGT CACTGAGATC 241 AGCTCCTTCA TTTGTTTCTT CACAAATAAT CAGAAAACCA AGCAGCAATT TGGCTCCTAA 301 CAATGTGGTT TTCAGAAATC CATCTAAGAG ATCCCTGAGT ATATGTAGTA CTTGGTGCAG 361 CAAAAGGTGT AAATGTTACT TGATAGCTCA ATTTTTGTTT CACATCTGAA AAAACAAGTG 421 TAGTTGGTTC AACTTTCACA TCAAGGCCTT GCGGTGAATC AATATCAACT CGGTATGTCG 481 AGTTGGCTTG TCCTACATTT GTCACAGTTC TTGAATATAC TTGAACTCCT GAGTTGCTTT 541 TAACTTGAAT TGCAAACGAT GGATAATTTA GTTGACCTTC TAAGATACTC GTAACCTCTG 601 AACAATTAAC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 661 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 721 TTGATGGATT AACATGACCG GCACCTGT Predicted gene structure (within gDNA segment 1602 to 9796): Exon 1 6215 6246 ( 32 n); cDNA 1 32 ( 32 n); score: 0.375 Intron 1 6247 6366 ( 120 n); Pd: 0.753 (s: 0), Pa: 0.000 (s: 0.96) Exon 2 6367 7082 ( 716 n); cDNA 33 748 ( 716 n); score: 0.997 MATCH C08HBa0165B06.1+ SGN-E543260+ 0.997 748 1.000 C PGS_C08HBa0165B06.1+_SGN-E543260+ (6215 6246,6367 7082) Alignment (genomic DNA sequence = upper lines): GGGAAAAAGA AGTGTTGAAA TCTCGATATC TGGTTGACAT TTCCTCATCA TTAAACTCAC 6274 ||| | ||| | | | | | GGGCCCCCCT CGAGTTTTTT TTTTTTTTTT TT........ .......... .......... 32 TATGAACAAT ATATATTTGT GAATTGTTCT ATTCATATGC ATTAGTGGTT AATGGAAAGA 6334 .......... .......... .......... .......... .......... .......... 32 GCACATAAAT CAGCCCAGTT ATAGCGAAAA AGATAAACAT AATATTTGTT TTTATTGCAA 6394 | ||||| |||||||||| |||||||||| .......... .......... .......... ..TTTAACAT AATATTTGTT TTTATTGCAA 60 ACAACAAAAA TAACATACTC AGTGTAGTTT TACAAGTGTG GTCTGTGGAG GGTGAGGCTG 6454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACAAAAA TAACATACTC AGTGTAGTTT TACAAGTGTG GTCTGTGGAG GGTGAGGCTG 120 ACAAGGTGGG GTGGAACATA TGAACACAAG AGTAAACATA TGGGATAATA AACCAATGTT 6514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGGTGGG GTGGAACATA TGAACACAAG AGTAAACATA TGGGATAATA AACCAATGTT 180 AACATCTTTA AGATGGTTTT ATTGCAAATG AAAAATCTTG ATCAGTATGT CACTGAGATC 6574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATCTTTA AGATGGTTTT ATTGCAAATG AAAAATCTTG ATCAGTATGT CACTGAGATC 240 AGCTCCTTCA TTTGTTTCTT CACAAATAAT CAGAAAACCA AGCAGCAATT TGGCTCCTAA 6634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTCCTTCA TTTGTTTCTT CACAAATAAT CAGAAAACCA AGCAGCAATT TGGCTCCTAA 300 CAATGTGGTT TTCAGAAATC CATCTAAGAG ATCCCTGAGT ATATGTAGTA CTTGGTGCAG 6694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATGTGGTT TTCAGAAATC CATCTAAGAG ATCCCTGAGT ATATGTAGTA CTTGGTGCAG 360 CAAAAGGTGT AAATGTTACT TGATAGCTCA ATTTTTGTTT CACATCTGAA AAAACAAGTG 6754 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAGGTGT AAATGTTACT TGATAGCTCA ATTTTTGTTT CACATCTGAA AAAACAAGTG 420 TAGTTGGTTC AACTTTCACA TCAAGGCCTT GCGGTGAATC AATATCAACT CGGTATGTCG 6814 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTGGTTC AACTTTCACA TCAAGGCCTT GCGGTGAATC AATATCAACT CGGTATGTCG 480 AGTTGGCTTG TCCTACATTT GTCACAGTTC TTGAATATAC TTGAACTCCT GAGTTGCTTT 6874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGGCTTG TCCTACATTT GTCACAGTTC TTGAATATAC TTGAACTCCT GAGTTGCTTT 540 TAACTTGAAT TGCAAACGAT GGATAATTTA GTTGACCTTC TAAGATACTC GTAACCTCTG 6934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACTTGAAT TGCAAACGAT GGATAATTTA GTTGACCTTC TAAGATACTC GTAACCTCTG 600 AACAATTAAC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 6994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATTAAC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 660 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 7054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 720 TTGATGGATT AACATGACCG GCACCTGT 7082 |||||||||| |||||||||| |||||||| TTGATGGATT AACATGACCG GCACCTGT 748 hqPGS_C08HBa0165B06.1+_SGN-E543260+ (6215 6246,6367 7082) ******************************************************************************** EST sequence 324 -strand 809 n (File: SGN-E543261-) 1 GTATATGTAG TACTGGTGCA GCAAAAGGTG TAAATGTTAC TTGATAGCTC AATTTTTGTT 61 TCACATCTGA AAAAACAAGT GTAGTTGGTT CAACTTTCAC ATCAAGGCCT TGCGGTGAAT 121 CAATATCAAC TCGGTATGTC GAGTTGGCTT GTCCTACATT TGTCACAGTT CTTGAATATA 181 CTTGAACTCC TGAGTTGCTT TTAACTTGAA TTGCAAACGA TGGATAATTT AGTTGACCTT 241 CTAAGATACT CGTAACCTCT GAACAATTAA CTTTGCGCTG CAGAATGACT GCAATTTGTC 301 TGTTTGTGTA ATTCAAACCA CATAAATAAG GTAAGTAATC AGATGGCTTG ATATCATATA 361 TCAGGCCGGG GGCATTTGCT TTTGATGGAT TAACATGACC GGCACCTGTG GCAAAGACAT 421 CGGCTGGAAG GTAAGTTTCG TCCTCGATTA AGTTGGATCC GAGGTTTAAG ACATCGGCTG 481 TTGTCATAAT AGCTGACTTA ATTGCAGCTG GAGACCAATC GGGGTGAACA CTTTTTAGTA 541 GTGCTGCAAC GCCACTGAGG TGAGGACAAG ACATTGAGGT GCCTGAGATC ATGTTGAATG 601 TCGAGTTGGT ATTTGTGTTG TTCTCCAAGG AAACAGGCCA AGCTGCTAAA ATGTTAACAC 661 CAGGACCAAT AATGTCCGGT TTCAGAATTC TAGGACTTAC ATAACTTGGA CCCCTGGAAG 721 AAAATCCAGC AACCACTGGA GCACGATTAT CTCCGATTGT AGTTCCCTTG AATGCGATTG 781 TTGCAGTGGG GGTTGTTGTT GAGTTTATG Predicted gene structure (within gDNA segment 1904 to 8295): Exon 1 6673 7482 ( 810 n); cDNA 1 809 ( 809 n); score: 0.999 MATCH C08HBa0165B06.1+ SGN-E543261- 0.999 810 1.001 C PGS_C08HBa0165B06.1+_SGN-E543261- (6673 7482) Alignment (genomic DNA sequence = upper lines): GTATATGTAG TACTTGGTGC AGCAAAAGGT GTAAATGTTA CTTGATAGCT CAATTTTTGT 6732 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATATGTAG TAC-TGGTGC AGCAAAAGGT GTAAATGTTA CTTGATAGCT CAATTTTTGT 59 TTCACATCTG AAAAAACAAG TGTAGTTGGT TCAACTTTCA CATCAAGGCC TTGCGGTGAA 6792 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACATCTG AAAAAACAAG TGTAGTTGGT TCAACTTTCA CATCAAGGCC TTGCGGTGAA 119 TCAATATCAA CTCGGTATGT CGAGTTGGCT TGTCCTACAT TTGTCACAGT TCTTGAATAT 6852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATATCAA CTCGGTATGT CGAGTTGGCT TGTCCTACAT TTGTCACAGT TCTTGAATAT 179 ACTTGAACTC CTGAGTTGCT TTTAACTTGA ATTGCAAACG ATGGATAATT TAGTTGACCT 6912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGAACTC CTGAGTTGCT TTTAACTTGA ATTGCAAACG ATGGATAATT TAGTTGACCT 239 TCTAAGATAC TCGTAACCTC TGAACAATTA ACTTTGCGCT GCAGAATGAC TGCAATTTGT 6972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTAAGATAC TCGTAACCTC TGAACAATTA ACTTTGCGCT GCAGAATGAC TGCAATTTGT 299 CTGTTTGTGT AATTCAAACC ACATAAATAA GGTAAGTAAT CAGATGGCTT GATATCATAT 7032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTTGTGT AATTCAAACC ACATAAATAA GGTAAGTAAT CAGATGGCTT GATATCATAT 359 ATCAGGCCGG GGGCATTTGC TTTTGATGGA TTAACATGAC CGGCACCTGT GGCAAAGACA 7092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAGGCCGG GGGCATTTGC TTTTGATGGA TTAACATGAC CGGCACCTGT GGCAAAGACA 419 TCGGCTGGAA GGTAAGTTTC GTCCTCGATT AAGTTGGATC CGAGGTTTAA GACATCGGCT 7152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGCTGGAA GGTAAGTTTC GTCCTCGATT AAGTTGGATC CGAGGTTTAA GACATCGGCT 479 GTTGTCATAA TAGCTGACTT AATTGCAGCT GGAGACCAAT CGGGGTGAAC ACTTTTTAGT 7212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCATAA TAGCTGACTT AATTGCAGCT GGAGACCAAT CGGGGTGAAC ACTTTTTAGT 539 AGTGCTGCAA CGCCACTGAG GTGAGGACAA GACATTGAGG TGCCTGAGAT CATGTTGAAT 7272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGCTGCAA CGCCACTGAG GTGAGGACAA GACATTGAGG TGCCTGAGAT CATGTTGAAT 599 GTCGAGTTGG TATTTGTGTT GTTCTCCAAG GAAACAGGCC AAGCTGCTAA AATGTTAACA 7332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAGTTGG TATTTGTGTT GTTCTCCAAG GAAACAGGCC AAGCTGCTAA AATGTTAACA 659 CCAGGACCAA TAATGTCCGG TTTCAGAATT CTAGGACTTA CATAACTTGG ACCCCTGGAA 7392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGACCAA TAATGTCCGG TTTCAGAATT CTAGGACTTA CATAACTTGG ACCCCTGGAA 719 GAAAATCCAG CAACCACTGG AGCACGATTA TCTCCGATTG TAGTTCCCTT GAATGCGATT 7452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAATCCAG CAACCACTGG AGCACGATTA TCTCCGATTG TAGTTCCCTT GAATGCGATT 779 GTTGCAGTGG GGGTTGTTGT TGAGTTTATG 7482 |||||||||| |||||||||| |||||||||| GTTGCAGTGG GGGTTGTTGT TGAGTTTATG 809 hqPGS_C08HBa0165B06.1+_SGN-E543261- (6673 7482) ******************************************************************************** EST sequence 210 -strand 547 n (File: SGN-E303894-) 1 AACAATTAGC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 61 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 121 TTGATGGATT AACATGACCG GCACCTGTGG CAAAGACATC GGCTGGAAGG TAAGTTTCGT 181 CCTCGATTAA GTTGGATCCG AGGTTTAAGA CATCGGCTGT TGTCATAATA GCTGACTTAA 241 TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTTAGTAG TGCTGCAACG CCACTGAGGT 301 GAGGACAAGA CATTGAGGTG CCTGAGATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 361 TCTCCAAGGA AACAGGCCAA GCTGCTAAAA TGTTAACACC AGGACCAATA ATGTCCGGTT 421 TCAGAATTAT AGGACTTACA TAACTTGGAC CCTTGGAAGA AAATCCAGCA ACCACTGGAG 481 CACGATTATC TCCGATTGTA GTTCCCTTGA ATGCGATTGT TGCAGTGGGG GTTGTTGTTG 541 AGTTTAT Predicted gene structure (within gDNA segment 3325 to 8285): Exon 1 6935 7481 ( 547 n); cDNA 1 547 ( 547 n); score: 0.995 MATCH C08HBa0165B06.1+ SGN-E303894- 0.995 547 1.000 C PGS_C08HBa0165B06.1+_SGN-E303894- (6935 7481) Alignment (genomic DNA sequence = upper lines): AACAATTAAC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 6994 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATTAGC TTTGCGCTGC AGAATGACTG CAATTTGTCT GTTTGTGTAA TTCAAACCAC 60 ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 7054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAATAAGG TAAGTAATCA GATGGCTTGA TATCATATAT CAGGCCGGGG GCATTTGCTT 120 TTGATGGATT AACATGACCG GCACCTGTGG CAAAGACATC GGCTGGAAGG TAAGTTTCGT 7114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGATT AACATGACCG GCACCTGTGG CAAAGACATC GGCTGGAAGG TAAGTTTCGT 180 CCTCGATTAA GTTGGATCCG AGGTTTAAGA CATCGGCTGT TGTCATAATA GCTGACTTAA 7174 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGATTAA GTTGGATCCG AGGTTTAAGA CATCGGCTGT TGTCATAATA GCTGACTTAA 240 TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTTAGTAG TGCTGCAACG CCACTGAGGT 7234 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGCTGG AGACCAATCG GGGTGAACAC TTTTTAGTAG TGCTGCAACG CCACTGAGGT 300 GAGGACAAGA CATTGAGGTG CCTGAGATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 7294 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGACAAGA CATTGAGGTG CCTGAGATCA TGTTGAATGT CGAGTTGGTA TTTGTGTTGT 360 TCTCCAAGGA AACAGGCCAA GCTGCTAAAA TGTTAACACC AGGACCAATA ATGTCCGGTT 7354 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCAAGGA AACAGGCCAA GCTGCTAAAA TGTTAACACC AGGACCAATA ATGTCCGGTT 420 TCAGAATTCT AGGACTTACA TAACTTGGAC CCCTGGAAGA AAATCCAGCA ACCACTGGAG 7414 |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TCAGAATTAT AGGACTTACA TAACTTGGAC CCTTGGAAGA AAATCCAGCA ACCACTGGAG 480 CACGATTATC TCCGATTGTA GTTCCCTTGA ATGCGATTGT TGCAGTGGGG GTTGTTGTTG 7474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGATTATC TCCGATTGTA GTTCCCTTGA ATGCGATTGT TGCAGTGGGG GTTGTTGTTG 540 AGTTTAT 7481 ||||||| AGTTTAT 547 hqPGS_C08HBa0165B06.1+_SGN-E303894- (6935 7481) ******************************************************************************** EST sequence 325 +strand 809 n (File: SGN-E543261+) 1 CATAAACTCA ACAACAACCC CCACTGCAAC AATCGCATTC AAGGGAACTA CAATCGGAGA 61 TAATCGTGCT CCAGTGGTTG CTGGATTTTC TTCCAGGGGT CCAAGTTATG TAAGTCCTAG 121 AATTCTGAAA CCGGACATTA TTGGTCCTGG TGTTAACATT TTAGCAGCTT GGCCTGTTTC 181 CTTGGAGAAC AACACAAATA CCAACTCGAC ATTCAACATG ATCTCAGGCA CCTCAATGTC 241 TTGTCCTCAC CTCAGTGGCG TTGCAGCACT ACTAAAAAGT GTTCACCCCG ATTGGTCTCC 301 AGCTGCAATT AAGTCAGCTA TTATGACAAC AGCCGATGTC TTAAACCTCG GATCCAACTT 361 AATCGAGGAC GAAACTTACC TTCCAGCCGA TGTCTTTGCC ACAGGTGCCG GTCATGTTAA 421 TCCATCAAAA GCAAATGCCC CCGGCCTGAT ATATGATATC AAGCCATCTG ATTACTTACC 481 TTATTTATGT GGTTTGAATT ACACAAACAG ACAAATTGCA GTCATTCTGC AGCGCAAAGT 541 TAATTGTTCA GAGGTTACGA GTATCTTAGA AGGTCAACTA AATTATCCAT CGTTTGCAAT 601 TCAAGTTAAA AGCAACTCAG GAGTTCAAGT ATATTCAAGA ACTGTGACAA ATGTAGGACA 661 AGCCAACTCG ACATACCGAG TTGATATTGA TTCACCGCAA GGCCTTGATG TGAAAGTTGA 721 ACCAACTACA CTTGTTTTTT CAGATGTGAA ACAAAAATTG AGCTATCAAG TAACATTTAC 781 ACCTTTTGCT GCACCAGTAC TACATATAC Predicted gene structure (within gDNA segment 13562 to 9376): Exon 1 11379 10596 ( 784 n); cDNA 1 784 ( 784 n); score: 0.865 MATCH C08HBa0165B06.1- SGN-E543261+ 0.865 784 0.969 C PGS_C08HBa0165B06.1-_SGN-E543261+ (11379 10596) Alignment (genomic DNA sequence = upper lines): CATAGACTCA ACACCAACCC CAACAGCCAC AATAGTGTTC AAGGGAACTA TAATCAGAGA 11320 |||| ||||| ||| |||||| | || || || ||| | ||| |||||||||| |||| |||| CATAAACTCA ACAACAACCC CCACTGCAAC AATCGCATTC AAGGGAACTA CAATCGGAGA 60 TGATCGTGCT CCAGTGGTTG CTTCATTGTC TTCCAGAGGT CCTAGTTATG CAAAGCCCTG 11260 | |||||||| |||||||||| || ||| || |||||| ||| || ||||||| ||| ||| TAATCGTGCT CCAGTGGTTG CTGGATTTTC TTCCAGGGGT CCAAGTTATG -TAAGTCCTA 119 GAATTCTAAA ATCAGACATT ATTGGTCCTG GCGTTAACAT TCTAGCAGCT TGGCATATTT 11200 ||||||| || | | |||||| |||||||||| | |||||||| | |||||||| |||| | ||| GAATTCTGAA ACCGGACATT ATTGGTCCTG GTGTTAACAT TTTAGCAGCT TGGCCTGTTT 179 CCTTGGAGAA CAATACAAAC ACCAACTCGA GATTCAACAT GATCTCAGGC ACCTCAATGT 11140 |||||||||| ||| ||||| |||||||||| ||||||||| |||||||||| |||||||||| CCTTGGAGAA CAACACAAAT ACCAACTCGA CATTCAACAT GATCTCAGGC ACCTCAATGT 239 CTTGTCCTCA CCTCAGTGGC GTTGCAGCAC TACTAAAAAG TGTTCACCCC GATTGGTCTC 11080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGTCCTCA CCTCAGTGGC GTTGCAGCAC TACTAAAAAG TGTTCACCCC GATTGGTCTC 299 CAGCTGCAAT TAAGTCTGTA ATTATGACAA CAGCCAATGT CTTCAACCTC GGATCTAACT 11020 |||||||||| |||||| | |||||||||| ||||| |||| ||| |||||| ||||| |||| CAGCTGCAAT TAAGTCAGCT ATTATGACAA CAGCCGATGT CTTAAACCTC GGATCCAACT 359 TAATCGAGGA TGAAACATAC CTTCCGGCCA ATGTTTTCGC CACTGGTGCA GGCCATGTTA 10960 |||||||||| ||||| ||| ||||| ||| |||| || || ||| ||||| || ||||||| TAATCGAGGA CGAAACTTAC CTTCCAGCCG ATGTCTTTGC CACAGGTGCC GGTCATGTTA 419 ATCCGTCAAA AGCAAATGAT CTAGGTCTGA TATATGACGT -AGACCAACC GTTTACTTAC 10901 |||| ||||| |||||||| | || |||| ||||||| | | ||| | | |||||||| ATCCATCAAA AGCAAATGCC CCCGGCCTGA TATATGATAT CAAGCCATCT GATTACTTAC 479 CTTATTTATG TGGTCTAAAT TACATAGACA CAGAAGTTGG ATTCTTTTTT CCGGGAAAAG 10841 |||||||||| |||| | ||| |||| | ||| | || ||| | || || | | | | |||| CTTATTTATG TGGTTTGAAT TACACAAACA GACAAATTGC AGTCATTCTG CAGCGCAAAG 539 TTAATTGTTC AGAGGTTACT AGCATCTCAG ATGGTCAACT AAATTATCCA TCGTTTTCGA 10781 |||||||||| ||||||||| || |||| || | |||||||| |||||||||| |||||| | | TTAATTGTTC AGAGGTTACG AGTATCTTAG AAGGTCAACT AAATTATCCA TCGTTTGCAA 599 TCCAAGTCAG AGTCAACTCA GCAGCTCAAG TATATTCAAG AACTGTGATG AATGTTGGAC 10721 | ||||| | | ||||||| | || ||||| |||||||||| |||||||| ||||| |||| TTCAAGTTAA AAGCAACTCA GGAGTTCAAG TATATTCAAG AACTGTGACA AATGTAGGAC 659 AAACCAACTC AACATACAGA GTTGAAATTG GTTCACCGCC GAATCTTGAT GTGAAAGTTG 10661 || ||||||| |||||| || ||||| |||| |||||||| |||||| |||||||||| AAGCCAACTC GACATACCGA GTTGATATTG ATTCACCGCA AGGCCTTGAT GTGAAAGTTG 719 AACCAACTAC ACTTGTTTTT TCAGAGGTGA AACAAGCATT GAGCTATCAA GTGACATTTA 10601 |||||||||| |||||||||| ||||| |||| ||||| ||| |||||||||| || ||||||| AACCAACTAC ACTTGTTTTT TCAGATGTGA AACAAAAATT GAGCTATCAA GTAACATTTA 779 CACCT 10596 ||||| CACCT 784 hqPGS_C08HBa0165B06.1-_SGN-E543261+ (11379 10596) ******************************************************************************** EST sequence 211 +strand 547 n (File: SGN-E303894+) 1 ATAAACTCAA CAACAACCCC CACTGCAACA ATCGCATTCA AGGGAACTAC AATCGGAGAT 61 AATCGTGCTC CAGTGGTTGC TGGATTTTCT TCCAAGGGTC CAAGTTATGT AAGTCCTATA 121 ATTCTGAAAC CGGACATTAT TGGTCCTGGT GTTAACATTT TAGCAGCTTG GCCTGTTTCC 181 TTGGAGAACA ACACAAATAC CAACTCGACA TTCAACATGA TCTCAGGCAC CTCAATGTCT 241 TGTCCTCACC TCAGTGGCGT TGCAGCACTA CTAAAAAGTG TTCACCCCGA TTGGTCTCCA 301 GCTGCAATTA AGTCAGCTAT TATGACAACA GCCGATGTCT TAAACCTCGG ATCCAACTTA 361 ATCGAGGACG AAACTTACCT TCCAGCCGAT GTCTTTGCCA CAGGTGCCGG TCATGTTAAT 421 CCATCAAAAG CAAATGCCCC CGGCCTGATA TATGATATCA AGCCATCTGA TTACTTACCT 481 TATTTATGTG GTTTGAATTA CACAAACAGA CAAATTGCAG TCATTCTGCA GCGCAAAGCT 541 AATTGTT Predicted gene structure (within gDNA segment 13552 to 8124): Exon 1 11378 10832 ( 547 n); cDNA 1 547 ( 547 n); score: 0.856 MATCH C08HBa0165B06.1- SGN-E303894+ 0.856 547 1.000 C PGS_C08HBa0165B06.1-_SGN-E303894+ (11378 10832) Alignment (genomic DNA sequence = upper lines): ATAGACTCAA CACCAACCCC AACAGCCACA ATAGTGTTCA AGGGAACTAT AATCAGAGAT 11319 ||| |||||| || ||||||| || || ||| || | |||| ||||||||| |||| ||||| ATAAACTCAA CAACAACCCC CACTGCAACA ATCGCATTCA AGGGAACTAC AATCGGAGAT 60 GATCGTGCTC CAGTGGTTGC TTCATTGTCT TCCAGAGGTC CTAGTTATGC AAAGCCCTGG 11259 ||||||||| |||||||||| | ||| ||| |||| |||| | ||||||| ||| ||| AATCGTGCTC CAGTGGTTGC TGGATTTTCT TCCAAGGGTC CAAGTTATG- TAAGTCCTAT 119 AATTCTAAAA TCAGACATTA TTGGTCCTGG CGTTAACATT CTAGCAGCTT GGCATATTTC 11199 |||||| ||| | ||||||| |||||||||| ||||||||| ||||||||| ||| | |||| AATTCTGAAA CCGGACATTA TTGGTCCTGG TGTTAACATT TTAGCAGCTT GGCCTGTTTC 179 CTTGGAGAAC AATACAAACA CCAACTCGAG ATTCAACATG ATCTCAGGCA CCTCAATGTC 11139 |||||||||| || ||||| | ||||||||| |||||||||| |||||||||| |||||||||| CTTGGAGAAC AACACAAATA CCAACTCGAC ATTCAACATG ATCTCAGGCA CCTCAATGTC 239 TTGTCCTCAC CTCAGTGGCG TTGCAGCACT ACTAAAAAGT GTTCACCCCG ATTGGTCTCC 11079 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCAC CTCAGTGGCG TTGCAGCACT ACTAAAAAGT GTTCACCCCG ATTGGTCTCC 299 AGCTGCAATT AAGTCTGTAA TTATGACAAC AGCCAATGTC TTCAACCTCG GATCTAACTT 11019 |||||||||| ||||| | | |||||||||| |||| ||||| || ||||||| |||| ||||| AGCTGCAATT AAGTCAGCTA TTATGACAAC AGCCGATGTC TTAAACCTCG GATCCAACTT 359 AATCGAGGAT GAAACATACC TTCCGGCCAA TGTTTTCGCC ACTGGTGCAG GCCATGTTAA 10959 ||||||||| ||||| |||| |||| ||| | ||| || ||| || ||||| | | |||||||| AATCGAGGAC GAAACTTACC TTCCAGCCGA TGTCTTTGCC ACAGGTGCCG GTCATGTTAA 419 TCCGTCAAAA GCAAATGATC TAGGTCTGAT ATATGACGT- AGACCAACCG TTTACTTACC 10900 ||| |||||| ||||||| | || ||||| |||||| | | ||| | | ||||||||| TCCATCAAAA GCAAATGCCC CCGGCCTGAT ATATGATATC AAGCCATCTG ATTACTTACC 479 TTATTTATGT GGTCTAAATT ACATAGACAC AGAAGTTGGA TTCTTTTTTC CGGGAAAAGT 10840 |||||||||| ||| | |||| ||| | ||| | || ||| | || || | | | | |||| TTATTTATGT GGTTTGAATT ACACAAACAG ACAAATTGCA GTCATTCTGC AGCGCAAAGC 539 TAATTGTT 10832 |||||||| TAATTGTT 547 hqPGS_C08HBa0165B06.1-_SGN-E303894+ (11378 10832) ******************************************************************************** EST sequence 5 -strand 709 n (File: SGN-E376168-) 1 AGTGACATTT TCCAAGACAA TTAACAGCTC AATGTCTGGG GTTGTTGAGG GATTCTTGAA 61 GTGGAATTCT AACAGGCACT CTGTGAGAAG TCCAATTGCA GTTGTGTTGG CATTGGCTAA 121 GTAAGTGCAC AAAGTATTCA AACATTTGAA AATGCTGTTT GATTACACAA TAAACGTTCT 181 GTTACTTTTT TCATTGTTAA AACAATAAAA CAAAAAAAAA AAAAAAAAAA AGAAAAAGCT 241 TGTACCTCGG CCCCGAGGTA CTATTTGAAC CCGAGACAGC CCGGAGAGTG GGGACTTCCA 301 AAGCATGGCA AGAAAAAGCA TCCTATGGTT TCACTCAGTA TATACTCTAC AAATTAAGTT 361 TCCGTCTCTT CCTCTTGGCA ATTTGCATAT ATCTAGCCTT CAATGTATCG TTGTAGGATA 421 ATAATCATAA CTCATCATGA TCCGAGTTTT CATCTGCAGA TGGCTTCTCT GCCTCTGAAG 481 CTGTTTGTTC TTTCTGGGAG GTACCCTCCT CAGAAGAGGA TTTGGTAGTG TCTGCTTTCT 541 CCTTGCTGTT TTCAGTTTCA TTTTTCAAAG GCTTCTCAAC CTTAGGCTTT GGCTTTGGTA 601 TTTTATTTAC CTTGTTAACC TTGTCTTGAA GATCAAAAAC CTTTACATAT ACTTCTTCAG 661 AAGTAAATGC AGGCTTGTCG GATCCAGGAG TGTTTTTCTG ACCTGCCCG Predicted gene structure (within gDNA segment 15532 to 7872): Exon 1 14571 14450 ( 122 n); cDNA 1 122 ( 122 n); score: 0.811 Intron 1 14449 13470 ( 980 n); Pd: 0.000 (s: 0.80), Pa: 0.900 (s: 0.51) Exon 2 13469 13430 ( 40 n); cDNA 123 162 ( 40 n); score: 0.512 Intron 2 13429 12767 ( 663 n); Pd: 0.000 (s: 0.51), Pa: 0.000 (s: 0) Exon 3 12766 12742 ( 25 n); cDNA 163 187 ( 25 n); score: 0.720 Intron 3 12741 8585 (4157 n); Pd: 0.489 (s: 0), Pa: 0.949 (s: 0.58) Exon 4 8584 8498 ( 87 n); cDNA 188 267 ( 80 n); score: 0.609 MATCH C08HBa0165B06.1- SGN-E376168- 0.727 274 0.386 C PGS_C08HBa0165B06.1-_SGN-E376168- (14571 14450,13469 13430,12766 12742,8584 8498) Alignment (genomic DNA sequence = upper lines): AGTGACATTT TCCAAGACAA CCAGCAGTTC AGAAGTTGTG GTTGTTGAGG GATTCTTGAA 14512 |||||||||| |||||||||| | ||| || | || | |||||||||| |||||||||| AGTGACATTT TCCAAGACAA TTAACAGCTC AATGTCTGGG GTTGTTGAGG GATTCTTGAA 60 ATGGACTTCT ACTAGGCACT CTGTGAGAAG TCCTATTGCA GTTGTGTTGG TCTAGTGAAA 14452 |||| |||| | ||||||| |||||||||| ||| |||||| |||||||||| | | || GTGGAATTCT AACAGGCACT CTGTGAGAAG TCCAATTGCA GTTGTGTTGG CATTGGCTAA 120 AAATTGGCTT GCTTTTACTG TATACTTTAT GTTACTATTT CATTATTGAA TAAAGTGTCG 14392 GT........ .......... .......... .......... .......... .......... 122 CTGTTTGTTC ACAACTGATT GTAGAATAAA AAGCATATCC TCTTTGATAG AAGTCAGTTT 14332 .......... .......... .......... .......... .......... .......... 122 TTCGTTCATC GTTTCTCTTA CTTTTTATAT GTTCCATTTT TTTTTTAAGA CAAGAGTTCA 14272 .......... .......... .......... .......... .......... .......... 122 AAAATGTATG TTATCTCCAA TCATATATGT TGTTTACAAA GCTAGCATAA GAGATGAGAA 14212 .......... .......... .......... .......... .......... .......... 122 CACCTTATAG CATTCGTACG AAAAATAGCT ATCGTCACAA ACTTTCAAAT TGTATTGATA 14152 .......... .......... .......... .......... .......... .......... 122 AAACTCCAAG ATAATGTCCT GAAATTTCAG TTGTAAATTT AGAACATTAT AATAGTGTGA 14092 .......... .......... .......... .......... .......... .......... 122 TATGACATAA TTTGAATATT CTCAGGCGAC ACTAAAATTA TTAATTATTG ATTATATTAA 14032 .......... .......... .......... .......... .......... .......... 122 TGAAAAAGAA TGATGCATTA GCGATTTTTA AAATAATTTG AAAGTGTCTT CATGTTGATC 13972 .......... .......... .......... .......... .......... .......... 122 ATCCTATTTT GAAGAGGTCT GCTGTAAGGT CTCTTTCTCA TGCTTAGTAA ATTTATAGTT 13912 .......... .......... .......... .......... .......... .......... 122 GCTGAGGCTA TTAAAATTTA TAATATAATG TTTATTAAAA TTTTGGAATA TAGTCAAAAT 13852 .......... .......... .......... .......... .......... .......... 122 TGCCCCTGAA TTCTGTGTAA TAGTCTATTT ATATCCTCTA CTACATTTTG AGAAAGACCA 13792 .......... .......... .......... .......... .......... .......... 122 CAAATACCCT CAAGAGCTAA CAATCCAAAT TTTTAGTGAT ATGGCAAGCC ACGTGGAATT 13732 .......... .......... .......... .......... .......... .......... 122 AACCTCTCCA CCTAAGTATT GACAACTAAG ATTCACTACA ACAAACTGCA CCTTTAGCAG 13672 .......... .......... .......... .......... .......... .......... 122 CGACTTTTGG TTTTCGCATA ATCACTGAAA ACCTTTAGTT GCGATATTTT AAAAATTTGT 13612 .......... .......... .......... .......... .......... .......... 122 GGCGACTCTT GTTGCCACGA AAGATCTAAT TTCTCGTAGT AAATGCTAGT TGGCAACGGT 13552 .......... .......... .......... .......... .......... .......... 122 TAGGTGGAAG GATCAGTCTC ATATCACTAA AAATTTGGAT TGTTAACTCT TGATGGTATT 13492 .......... .......... .......... .......... .......... .......... 122 TGTGGTCTCT TGTGGATAAT AGCGGTGGTA ATTTTGATCC AAAAATATGA CAGAGC-GTA 13433 ||| | | || | ||| || ||| | || || .......... .......... ..AAGTGCAC AAAGT-ATTC AAACATTTGA AAATGCTGTT 159 TAAGTAGTCT ATCTCGCATA ATTCAGGCGG ACAAGCATGA AACTAGTTCA AGGATTCAAC 13373 | | TGA....... .......... .......... .......... .......... .......... 162 GGTATGGAGT TAAGGAGACA CCACATGCTG ATGCCATGCA CATGTTTTTT TTCTCATTAA 13313 .......... .......... .......... .......... .......... .......... 162 AAACAAAAGG TCAAATTAAG TGTTAATGCT TGATTTTGTC AATATTGACA AAGCTCAAAA 13253 .......... .......... .......... .......... .......... .......... 162 CGTATAATCT TAGAAATTGG CATATTTTAT TACAGAAGTA ATTAACAATA TCAGGCGGCC 13193 .......... .......... .......... .......... .......... .......... 162 AGTTGGGATT CTTTAAACTT TATCGTAATT CCCTTTCACT ATCTCAGCAT TAGTTTACTA 13133 .......... .......... .......... .......... .......... .......... 162 AACTACCCTT ATTTTATAAA CGTCTCTTGA AAATCGAACA CTACTAAGAA GATGGAGTAT 13073 .......... .......... .......... .......... .......... .......... 162 AAACTATTTT TTGTGTTGAA TTCCTAAGAT AACACCTATT TTTGGGACGG AGGTAGTACT 13013 .......... .......... .......... .......... .......... .......... 162 TGCGAGGTGA ACCAGTCACC TGAGTTAAGA TGTGTACAAA TTGACTCGAC ATTACTCAAG 12953 .......... .......... .......... .......... .......... .......... 162 TATATTGTAG ATTGATGACT TCATATATAT ATGATGCTTA TATGCCAACT TCATTAGCAA 12893 .......... .......... .......... .......... .......... .......... 162 ATAGAAGTTA AGTAGATTAA AATCATTTTA GCGTATTGTT GACCACTTTC GATGGCTTCT 12833 .......... .......... .......... .......... .......... .......... 162 AACTTGCAAA TAAAAAAATA TACTTCCAAT AAGTATATAT TCCCTCAATC AAAATTCTCA 12773 .......... .......... .......... .......... .......... .......... 162 AAACACTTAC CAAATAACAG CTCTTTCACT TGTACTAAAG TTATCATGGC TCAGTACAAT 12713 |||| ||||| | ||| | ||| | ......TTAC ACAATAAACG TTCTGTTACT T......... .......... .......... 187 TCAATTCTTA TTATAATTGG GCTGATTTAT GTGTTTTTTC CATTTACCAC TAATGCAGCT 12653 .......... .......... .......... .......... .......... .......... 187 GAACAGAACA ATTCACAAAT CTATATTGTT CATTGTGAGC TCCCTGATGG GGAAATGGCA 12593 .......... .......... .......... .......... .......... .......... 187 ACCAGATATC AAGATTTAGA AAGCTGGTAT CTTTCTTTCT TGCCTGCAAC AACCTCGGAT 12533 .......... .......... .......... .......... .......... .......... 187 AGTTCTCGTG AGGCACCACG TTTAATATAT TCCTATCGAA ATGTCCTAAC AGGTTTTGCA 12473 .......... .......... .......... .......... .......... .......... 187 GCTAAGTTAT CACCAGACGA TATAAAGGAA ATGGAGAAAA TGGAAGGATT TGTTTCTGCA 12413 .......... .......... .......... .......... .......... .......... 187 TGCCCCGAGG AGCTACTTAT TTTACACAGC ACACATAGTG TCAATTTAAT GGGGCTGTAT 12353 .......... .......... .......... .......... .......... .......... 187 CATAACATGG GGCTCTGGAA TGACTCGAAT TATGGGAAAG GTGTGATTAT TGGAGTTATT 12293 .......... .......... .......... .......... .......... .......... 187 GACGGGGGAA TTTTCCCCGA CCACCCTTCG TTTAATGATG ATGGGATGCC ACCTCCCCCT 12233 .......... .......... .......... .......... .......... .......... 187 GCTAAATGGA AGGGTGAGTG TGAATTGAAT GTCACAAAGT GTAACAACAA GCTCATTGGA 12173 .......... .......... .......... .......... .......... .......... 187 GCCAGGGTCT TCCTGAACTC GGGGATTGAT CCATGAGATG AAGATGGTCA TGGTACACAT 12113 .......... .......... .......... .......... .......... .......... 187 ACTGCTAGCA CGGCTGCTGG ACGTTTCGTG TCAGGTGCCA ACATTTTTGG CAATGCTAAT 12053 .......... .......... .......... .......... .......... .......... 187 GGCACTGCCA CGGGAGTTAA CCTCTTGCTC ATGTTGCTTT TTACAAAGCG TGCTCTGCTA 11993 .......... .......... .......... .......... .......... .......... 187 ACTTTTGTTC GGTGAGCGAC ATTTTGGCTG CAATGGATAT GGCTATTGAA GATGGTGTGG 11933 .......... .......... .......... .......... .......... .......... 187 ATATTCTTTC GGTTTCCCTT GGTAGTCTAT TTAATGCTTT CTATAGAAAA AGCATTGTGA 11873 .......... .......... .......... .......... .......... .......... 187 TTGGTGCATT TAGTGCTGTG AAAAAGGGAA TCTTTATCAG CTGTTCTGGA GGAAATTCAG 11813 .......... .......... .......... .......... .......... .......... 187 GACCATATAG TTTTTCAATG TCTAATGAAG CGCCCTGGAT TCTTACAGTT GGTGCAAGCA 11753 .......... .......... .......... .......... .......... .......... 187 CTATCGACAG GAAAATAAAG GCCACTGTTA TGCTTGATAA CAATCAAGAA TTCGAGGGAG 11693 .......... .......... .......... .......... .......... .......... 187 AATCAGCTTT GCAACCTAAT GACTTTCCTC CCACACTATT GCCTCTTGCC TATCCTGGAA 11633 .......... .......... .......... .......... .......... .......... 187 GCAATGCTAG TGATTCTGAT GCTAAATATT GTACCCCTGC TTCCCTGAAC AACACAATTG 11573 .......... .......... .......... .......... .......... .......... 187 TCATGGAAAA GATTGTGTTG TGCGAGTCTG GTAAAATATC GCAAGCTGAT AAAGGAGAAG 11513 .......... .......... .......... .......... .......... .......... 187 CAGTGAAGGC AGCTGGTGGT GCTGCCATGA TTTTTATGAA CTGAGAAGCC AATGCTAACA 11453 .......... .......... .......... .......... .......... .......... 187 CAACATTGGC CCAGGCTTAT GTCCTTGCAA CGACACATGT TGGTTATGCT GATGGTATAA 11393 .......... .......... .......... .......... .......... .......... 187 AAATCAAAGA ATACATAGAC TCAACACCAA CCCCAACAGC CACAATAGTG TTCAAGGGAA 11333 .......... .......... .......... .......... .......... .......... 187 CTATAATCAG AGATGATCGT GCTCCAGTGG TTGCTTCATT GTCTTCCAGA GGTCCTAGTT 11273 .......... .......... .......... .......... .......... .......... 187 ATGCAAAGCC CTGGAATTCT AAAATCAGAC ATTATTGGTC CTGGCGTTAA CATTCTAGCA 11213 .......... .......... .......... .......... .......... .......... 187 GCTTGGCATA TTTCCTTGGA GAACAATACA AACACCAACT CGAGATTCAA CATGATCTCA 11153 .......... .......... .......... .......... .......... .......... 187 GGCACCTCAA TGTCTTGTCC TCACCTCAGT GGCGTTGCAG CACTACTAAA AAGTGTTCAC 11093 .......... .......... .......... .......... .......... .......... 187 CCCGATTGGT CTCCAGCTGC AATTAAGTCT GTAATTATGA CAACAGCCAA TGTCTTCAAC 11033 .......... .......... .......... .......... .......... .......... 187 CTCGGATCTA ACTTAATCGA GGATGAAACA TACCTTCCGG CCAATGTTTT CGCCACTGGT 10973 .......... .......... .......... .......... .......... .......... 187 GCAGGCCATG TTAATCCGTC AAAAGCAAAT GATCTAGGTC TGATATATGA CGTAGACCAA 10913 .......... .......... .......... .......... .......... .......... 187 CCGTTTACTT ACCTTATTTA TGTGGTCTAA ATTACATAGA CACAGAAGTT GGATTCTTTT 10853 .......... .......... .......... .......... .......... .......... 187 TTCCGGGAAA AGTTAATTGT TCAGAGGTTA CTAGCATCTC AGATGGTCAA CTAAATTATC 10793 .......... .......... .......... .......... .......... .......... 187 CATCGTTTTC GATCCAAGTC AGAGTCAACT CAGCAGCTCA AGTATATTCA AGAACTGTGA 10733 .......... .......... .......... .......... .......... .......... 187 TGAATGTTGG ACAAACCAAC TCAACATACA GAGTTGAAAT TGGTTCACCG CCGAATCTTG 10673 .......... .......... .......... .......... .......... .......... 187 ATGTGAAAGT TGAACCAACT ACACTTGTTT TTTCAGAGGT GAAACAAGCA TTGAGCTATC 10613 .......... .......... .......... .......... .......... .......... 187 AAGTGACATT TACACCTCTG GATACCATAC CAAACAGTAC TTTTAATCAG GGATCTCTCA 10553 .......... .......... .......... .......... .......... .......... 187 GATGGATTTC TGAAAAACAC ATTGTTAATA GTCCAATTGC TGTTCGATTT TTCCTTTTCT 10493 .......... .......... .......... .......... .......... .......... 187 GAAAAATAAT TGAAGGATCT GATCTCAGTG ACACACTCAT TGAGATTTTT CTTTTGCAAT 10433 .......... .......... .......... .......... .......... .......... 187 AAAATCATGT TCAATATACA TTTCTATTAA ATATCCAAAG TACCATCCCC ACCACATAGT 10373 .......... .......... .......... .......... .......... .......... 187 ACACTTAAAA GTACAAACTT TTTTTATATT ACGAACACAA GAAAAAGCAA TATATGTACA 10313 .......... .......... .......... .......... .......... .......... 187 ACACTAAATC CTTAACACAT ATTTTTACAT GTTAGACCCT TCTTTTTCCC TCAAGTTAAA 10253 .......... .......... .......... .......... .......... .......... 187 TAATTTGTGC AATATAGAAG GTAACACAAC CATGCCCTTT TTAAATATGT TCTTTAGTAT 10193 .......... .......... .......... .......... .......... .......... 187 GGAGCTCAGC GTGAAGCCCT GCAAAAGGCT GCACACCTTC AACTTGTAGA GTGTTTCAAA 10133 .......... .......... .......... .......... .......... .......... 187 GAAAAAAATT AGTTTAAAGA GAAAAATCGA ATAATTTGCC TGATTCAATT TGGTGACAAA 10073 .......... .......... .......... .......... .......... .......... 187 ACCAATAATT TTAGAAAATT AATTTAATAA TGTAATACAT AGCTCATGAT CACATTGAAC 10013 .......... .......... .......... .......... .......... .......... 187 ATTTCAAAAT TCCAAAAGAA TATTTCCAAA TAAGTTAAAT ATGGAAGTAA ATTCATCTTG 9953 .......... .......... .......... .......... .......... .......... 187 ATATCCTTAT CTTGAAGTGG TCATCAAGTG TAAGGTTACT TTTTCATGAT TAGTACCTTT 9893 .......... .......... .......... .......... .......... .......... 187 ATAGTTTACT TTTAGTAAAT TAATATTTTT AGAAAAAAAG CATGTTATCC GGTGAAGATG 9833 .......... .......... .......... .......... .......... .......... 187 AGGTTATGAC TTTTCAAGAA TATAAATAAT GAACACTAGA TAGATATATT GTCATCAAAA 9773 .......... .......... .......... .......... .......... .......... 187 TGCGAATCCA AAATTTAAAC TAAATAAATT TTGATCTTTA GAACTCTTAA CATTGAATTC 9713 .......... .......... .......... .......... .......... .......... 187 ATTAAACTTT AAAATTATGA TTTAAAATCT AATATGATAC TAAGACTGCA TCCACTGGTG 9653 .......... .......... .......... .......... .......... .......... 187 TTGTCATGCT TGGTTTTTTC TTGGAAATGT ACTTAGTTTA GTATGAAAAT AAATCAAACA 9593 .......... .......... .......... .......... .......... .......... 187 TGAAACTAAT TCAAAATAAA AATGTCAAAT TAAGTGGTAA TGCTTGATTT ATTCAATATT 9533 .......... .......... .......... .......... .......... .......... 187 GACAAATCTC AAAATTTATA AAACTTTGGA AGTTTAGAAT ATTTGTATTA TAGAAGAAAT 9473 .......... .......... .......... .......... .......... .......... 187 TAACAATATT TGGAGGGAGG TGTACGCTTG CAACATTAAT ATAATTCTCT GTCATAATCT 9413 .......... .......... .......... .......... .......... .......... 187 CACCATTAGT CAAGAGGGAT GCTTGTTTTA TTAATTTTCT TCCGCCTTCA TTGAGATTTA 9353 .......... .......... .......... .......... .......... .......... 187 AACCTGAAAC CTCGTGATTC TCTATACACT TTATTGACTA TTACTTGTTT TCAGAACTCA 9293 .......... .......... .......... .......... .......... .......... 187 AGTTTAGGTA TATTTTGGTT CCAAGTAGAT GGCCTAATGA TCTAGCCATC AGAGTAACCA 9233 .......... .......... .......... .......... .......... .......... 187 TCTGGAGATT TCAGGTTAAG AATTCAGCTA CGACACTGGT TGTGTGAATC TGTCTGCTCC 9173 .......... .......... .......... .......... .......... .......... 187 AGCCTTTATG AGAACGGTTA CTTTGGTAAC ATGTACTTGG GAGTTGAACA AGTCGCCTCA 9113 .......... .......... .......... .......... .......... .......... 187 TGTAAGGTGC GTCCAAGTTA CCTGGAATAT TACCTAAAAA GTATATTTTA GAGTGATGAC 9053 .......... .......... .......... .......... .......... .......... 187 TTCATCTATA TGATGTTGCT CTGCCAAGTT CATTTTCACA GAGGATGTTA AATAGAATAA 8993 .......... .......... .......... .......... .......... .......... 187 AATCGTCTTA GCGTGTATCT TCAGGCATGA CTATTTCATA TTTCTAAAAT ATCTTCTGAC 8933 .......... .......... .......... .......... .......... .......... 187 TTGCAAATAA AAAAGTAAAC TTCCAGTAAG TATATATACC CTCAATCAAA ACTGAGAAAT 8873 .......... .......... .......... .......... .......... .......... 187 AATCACCAAA TACCAGTTGT TTCACTAGTA CTTAAGTTAT GGTGGCTCAA TACAGGTCAA 8813 .......... .......... .......... .......... .......... .......... 187 TTCTCTCTAT AATTGGGCTG ATTTGTGTGC TATTTCCATT TACCACTAAT GCAACAGAAC 8753 .......... .......... .......... .......... .......... .......... 187 AGGACAATTC ACAAATCTAT ATTGTTCATT GTGAGTTCCC TGATGGGAAA AGATCTACCA 8693 .......... .......... .......... .......... .......... .......... 187 ATAATCAAGA TTTGGAAAGC TATTATCTTT CTTTCTTGCC TGCAACAACC TCAGATAGTT 8633 .......... .......... .......... .......... .......... .......... 187 CTCGTGAAGC ACCACGATTG ATATATTCCT ATCGAAATGT TATAACAGGT TTTGCAGCTA 8573 | ||| || | .......... .......... .......... .......... ........-T TTT-CA--T- 194 AGTTATCACT AGAAGATTTA AAGGAAATGG AGAAAATGGA AGGATTTGTC TCTGCACGCC 8513 |||| || | || | | || ||| | |||| | | | |||| || | ||| TGTTAAAACA ATAAAACAAA AAAAAAAAAA AAAAAAAGAA AAAGCTTGTA CCT-C-GGCC 252 CCGAGGGGCT ACTTG 8498 |||||| || | ||| CCGAGGTACT ATTTG 267 hqPGS_C08HBa0165B06.1-_SGN-E376168- (14571 14450,13469 13430,12766 12742) ******************************************************************************** EST sequence 44 -strand 799 n (File: SGN-E548357-) 1 GAAGCTCATG TCCTTCCTGC ATTGGATGTT TCAAATGCTG ATGGAAAGAA AATTCTTGCC 61 TATATGAACT CATCTTCAAA TCCGGTTGCT TCAATCACCT TCCATGGAAC TGTAATTGGA 121 GACAAAAATG CTCCTATAGT TGCTTCATTT TCCTCACGAG GACCAAGCGT AGCAAGTCCT 181 GGCATCTTAA AACCTGACAT AATCGGTCCT GGTGTTAACG TCCTTGCTGC TTGGCCTACC 241 TCCGTGGATA ACAACAAAAA CACAAAATCA ACATTCCTTA TTTATGTGGT TTGAACTACA 301 CAAATCGGGA GGTAGGTAAA GTGTTACAAC GCAAGGTGAA TTGCTCGGAG GTAAAACGTA 361 TCCCTGAAGG GCAACTAAAT TATCCTTCAT TTTCCATCAG ACTTGGATCA ACTCCTCAGA 421 CATATACCAG AACCGTAACC AATGTTGGTG ATGCTAAATC ATCTTACAAA GTGGAGATAG 481 TTTCACCAAA AGGAGTTGTC GTGAAAGTTG AACCCTCCGC GCTAAATTTC TCAACGTTGA 541 ACCAGAAGTT GACATATCAA GTGATATTTA CCAAGACAAC TAATATCTCA ACTACCAGTG 601 ATGTTGAGGG ATTTTTGAAG TGGAATTCTA ATAGGCACTC TGTAAGAAGT CCAATTGCAG 661 TTAGAGTGTC TGCTGAATAA AACTAAAATG CTTTCAATCT AAAATGTAAA AATAAGTGCA 721 GAAATTATTC ACAATTAATC ATATTGGATT GCTGTTTTTT TTTCCAGTAA AAAAAAAAAA 781 AAAAAACTCG AGGGGGGCC Predicted gene structure (within gDNA segment 22772 to 13513): Exon 1 15398 15124 ( 275 n); cDNA 1 275 ( 275 n); score: 0.818 Intron 1 15123 14859 ( 265 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.76) Exon 2 14858 14437 ( 422 n); cDNA 276 694 ( 419 n); score: 0.791 PPA cDNA 769 787 MATCH C08HBa0165B06.1- SGN-E548357- 0.802 697 0.872 C PGS_C08HBa0165B06.1-_SGN-E548357- (15398 15124,14858 14437) Alignment (genomic DNA sequence = upper lines): GATGCTCATG TTCTTCCAGC ATTGGTTGTT TCAGCTGCAG ATGGAAGCAA AATTCTTGAT 15339 || ||||||| | ||||| || ||||| |||| ||| ||| | |||||| || |||||||| GAAGCTCATG TCCTTCCTGC ATTGGATGTT TCAAATGCTG ATGGAAAGAA AATTCTTGCC 60 TATACCAACT CAATATCGAA CCCTATTGCT ACAATCACAA TCCAAGGAAC AGTAATTGGA 15279 |||| |||| || || || || ||||| ||||||| |||| ||||| ||||||||| TATATGAACT CATCTTCAAA TCCGGTTGCT TCAATCACCT TCCATGGAAC TGTAATTGGA 120 GATAAAAATG CTCCCATAGT TGCTGCATTT TCTTCTCGCG GACCAAGTAA ACCTAATCCT 15219 || ||||||| |||| ||||| |||| ||||| || || || | ||||||| | | | |||| GACAAAAATG CTCCTATAGT TGCTTCATTT TCCTCACGAG GACCAAGCGT AGCAAGTCCT 180 GGGATCTTGA AACCTGACAT AATTGGTCCT GGTGTTAATA TCCTCGCTGC TTGGCCTACT 15159 || ||||| | |||||||||| ||| |||||| |||||||| |||| ||||| ||||||||| GGCATCTTAA AACCTGACAT AATCGGTCCT GGTGTTAACG TCCTTGCTGC TTGGCCTACC 240 TCTGTGGATG ACAACAAGGA CACCAAATCC ACATTCAATA TTATATCAGG CACCTCGATG 15099 || |||||| ||||||| | ||| ||||| ||||| TCCGTGGATA ACAACAAAAA CACAAAATCA ACATT..... .......... .......... 275 TCTTGCCCAC ACCTTAGTGG CATAGCAGCT CTGCTGAAGA GCACACATCC TGATTGGTCT 15039 .......... .......... .......... .......... .......... .......... 275 CCTGCTGCTA TTAAGTCTGC AATCATGACA ACCGCTTACA CGTTAAACCT TGACAGTAGT 14979 .......... .......... .......... .......... .......... .......... 275 CCAATACTAG ATGAAAGGTT ACTTCCTGCA GACATCTTTG CAATTGGTGC AGGACACGTT 14919 .......... .......... .......... .......... .......... .......... 275 AATCCATCAA GTGCAAATGA TCCAGGACTA GTTTATGATA CCCCCTCCGA GGACTACTTC 14859 .......... .......... .......... .......... .......... .......... 275 CCGTATTTAT GTGGTTTGGG ATACACAAAT GCACAGGTAA GTAGCCTGTT ACGACGCACA 14799 || ||||||| |||||||| ||||||||| ||||| ||| |||| || ||||| CCTTATTTAT GTGGTTTGAA CTACACAAAT CGGGAGGTAG GTAAAGTGTT ACAACGCAAG 335 GTGAATTGCT TGGAAGTGAA TAGTATCCCT GAAGCACAAT TAAACTATCC TTCTTTTTCC 14739 |||||||||| ||| || || |||||||| |||| ||| |||| ||||| ||| |||||| GTGAATTGCT CGGAGGTAAA ACGTATCCCT GAAGGGCAAC TAAATTATCC TTCATTTTCC 395 ATATATGGAC TTGGATCAAC TCCTCAGACA TATACAAGAA CTGTGACCAA CGTTGGTGAT 14679 || | ||| |||||||||| |||||||||| ||||| |||| | || ||||| ||||||||| AT-CA--GAC TTGGATCAAC TCCTCAGACA TATACCAGAA CCGTAACCAA TGTTGGTGAT 452 GCTACATCAT CTTACAAAGT GAAGATAGCT TCACTTATAG GAGTTGCCGT AGAAGTTGTA 14619 |||| ||||| |||||||||| | |||||| | |||| | || |||||| ||| |||||| | GCTAAATCAT CTTACAAAGT GGAGATAGTT TCACCAAAAG GAGTTGTCGT GAAAGTTGAA 512 CCCACAGAGC TAAATTTCTC CGAGTTGAAC CAGAAGTTAA CATACCAAGT GACATTTTCC 14559 ||| | | || |||||||||| ||||||| |||||||| | |||| ||||| || |||| || CCCTCCGCGC TAAATTTCTC AACGTTGAAC CAGAAGTTGA CATATCAAGT GATATTTACC 572 AAGACAACCA GCAGTTC-AG AAGTTGTGGT TGTTGAGGGA TTCTTGAAAT GGACTTCTAC 14500 |||||||| | | || | | || | |||||||||| || ||||| | ||| ||||| AAGACAACTA ATATCTCAAC TACCAGT-GA TGTTGAGGGA TTTTTGAAGT GGAATTCTAA 631 TAGGCACTCT GTGAGAAGTC CTATTGCAGT TGTGTTGGTC TAGTGAA-AA AATTGGCTTG 14441 |||||||||| || ||||||| | |||||||| | | ||| | |||| || || | || TAGGCACTCT GTAAGAAGTC CAATTGCAGT T-AGAGTGTC TGCTGAATAA AACTAAAATG 690 CTTT 14437 |||| CTTT 694 hqPGS_C08HBa0165B06.1-_SGN-E548357- (15398 15124,14858 14437) ******************************************************************************** EST sequence 313 +strand 441 n (File: SGN-E307529+) 1 TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 61 AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 121 TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 181 TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 241 AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 301 CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 361 GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT ATAAGTGCAT 421 AAAGTACTCG AAAAAAAAAA A Predicted gene structure (within gDNA segment 16221 to 13410): Exon 1 14847 14450 ( 398 n); cDNA 1 398 ( 398 n); score: 0.937 PPA cDNA 431 441 MATCH C08HBa0165B06.1- SGN-E307529+ 0.937 398 0.902 C PGS_C08HBa0165B06.1-_SGN-E307529+ (14847 14450) Alignment (genomic DNA sequence = upper lines): TGGTTTGGGA TACACAAATG CACAGGTAAG TAGCCTGTTA CGACGCACAG TGAATTGCTT 14788 ||||||| | |||||||||| |||||||||| || |||||| | ||||| | | |||||||| TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 60 GGAAGTGAAT AGTATCCCTG AAGCACAATT AAACTATCCT TCTTTTTCCA TATATGGACT 14728 ||||| || |||||||||| ||||| |||| |||||||||| || ||||||| ||| |||||| AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 120 TGGATCAACT CCTCAGACAT ATACAAGAAC TGTGACCAAC GTTGGTGATG CTACATCATC 14668 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| | ||||||| TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 180 TTACAAAGTG AAGATAGCTT CACTTATAGG AGTTGCCGTA GAAGTTGTAC CCACAGAGCT 14608 |||||||||| ||||||||| ||| |||||| ||||||| || |||||||||| ||||||| || TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 240 AAATTTCTCC GAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 14548 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 300 CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAATGG ACTTCTACTA GGCACTCTGT 14488 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 360 GAGAAGTCCT ATTGCAGTTG TGTTGGTCTA GTGAAAAA 14450 ||||||||| |||||||||| | |||||||| |||||||| GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAA 398 hqPGS_C08HBa0165B06.1-_SGN-E307529+ (14847 14450) ******************************************************************************** EST sequence 338 +strand 574 n (File: SGN-E207413+) 1 GAGAACACAT CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA 61 CACATTAAAC CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA 121 TGCAATAGGT GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA 181 TACCCCATTT GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT 241 AGGTAAATTG TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA 301 ATTAAACTAT CCTTCATTTT GCATATCGAG ACTTGGATCA ACTCCTCAGA CATACACCAG 361 AACTGTGACC AATGTTGGTG ATGCCAAATC ATCTTACACG GTGCAGATAG CTTCACCTAA 421 AGGCGTTGTC GTGAAAGTTA AGCCCAGCAA GCTAAATTTC TCGGAGTTGA ACCAGAAGCT 481 AACATACCAA GTGACATTTT CCAAGACAAT TAACAGCTCA ATGTCTGGGG TTGTTGAGGG 541 ATTCTTGAAG TGGAATTCTA ACAGGCACTC TGTG Predicted gene structure (within gDNA segment 17046 to 13292): Exon 1 15060 14487 ( 574 n); cDNA 1 574 ( 574 n); score: 0.855 MATCH C08HBa0165B06.1- SGN-E207413+ 0.855 574 1.000 C PGS_C08HBa0165B06.1-_SGN-E207413+ (15060 14487) Alignment (genomic DNA sequence = upper lines): GAGCACACAT CCTGATTGGT CTCCTGCTGC TATTAAGTCT GCAATCATGA CAACCGCTTA 15001 ||| |||||| |||||||||| ||||||||| |||||||||| ||||| |||| |||||||| | GAGAACACAT CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA 60 CACGTTAAAC CTTGACAGTA GTCCAATACT AGATGAAAGG TTACTTCCTG CAGACATCTT 14941 ||| |||||| |||| ||||| |||||||||| || ||||| | | ||||| | || |||| CACATTAAAC CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA 120 TGCAATTGGT GCAGGACACG TTAATCCATC AAGTGCAAAT GATCCAGGAC TAGTTTATGA 14881 |||||| ||| |||||||| | |||||||||| || |||||| |||||||||| |||||||||| TGCAATAGGT GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA 180 TACCCCCTCC GAGGACTACT TCCCGTATTT ATGTGGTTTG GGATACACAA ATGCACAGGT 14821 |||||| | ||||| || | || ||||| |||||||||| ||||||| || ||||||| TACCCCATTT GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT 240 AAGTAGCCTG TTACGACGCA CAGTGAATTG CTTGGAAGTG AATAGTATCC CTGAAGCACA 14761 | ||| || |||||||||| |||||||| || ||| || | ||||||| |||||||||| AGGTAAATTG TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA 300 ATTAAACTAT CCTTCTTTTT CCATATATGG ACTTGGATCA ACTCCTCAGA CATATACAAG 14701 |||||||||| ||||| |||| ||||| | |||||||||| |||||||||| |||| || || ATTAAACTAT CCTTCATTTT GCATATCGAG ACTTGGATCA ACTCCTCAGA CATACACCAG 360 AACTGTGACC AACGTTGGTG ATGCTACATC ATCTTACAAA GTGAAGATAG CTTCACTTAT 14641 |||||||||| || ||||||| |||| | ||| |||||||| ||| |||||| |||||| || AACTGTGACC AATGTTGGTG ATGCCAAATC ATCTTACACG GTGCAGATAG CTTCACCTAA 420 AGGAGTTGCC GTAGAAGTTG TACCCACAGA GCTAAATTTC TCCGAGTTGA ACCAGAAGTT 14581 ||| |||| | || ||||| |||| | |||||||||| || ||||||| |||||||| | AGGCGTTGTC GTGAAAGTTA AGCCCAGCAA GCTAAATTTC TCGGAGTTGA ACCAGAAGCT 480 AACATACCAA GTGACATTTT CCAAGACAAC CAGCAGTTCA GAAGTTGTGG TTGTTGAGGG 14521 |||||||||| |||||||||| ||||||||| | ||| ||| || || |||||||||| AACATACCAA GTGACATTTT CCAAGACAAT TAACAGCTCA ATGTCTGGGG TTGTTGAGGG 540 ATTCTTGAAA TGGACTTCTA CTAGGCACTC TGTG 14487 ||||||||| |||| ||||| |||||||| |||| ATTCTTGAAG TGGAATTCTA ACAGGCACTC TGTG 574 hqPGS_C08HBa0165B06.1-_SGN-E207413+ (15060 14487) ******************************************************************************** EST sequence 109 -strand 493 n (File: SGN-E287935-) 1 ATAATGATAT ATCAATATAA TTCTTAATTT TGAAATAAGA ATGTTTTTTC TGTTATTAAG 61 TCTGCAATGA TGACAACGGC TGACACGTTA AACCTTGCTA ATAGTCCAAT ACTCGATGAA 121 AGGCTCCTTC CTGCTGACAT CTATGCAATT GGTGCAGGAC ATGTTAATCC ATCAAGGGCA 181 AATGATCCAG GACTAGTTTA TGATACACCA TTCGAGGACT ATGTACCTTA TTTATGTGGT 241 TTGAAGTACA CAGATCAACA GGTAGGTAAC CTGATACAAC GCAGGGTGAA TTGCTCGGAG 301 GTGAAAAGTA TCCTTGAAGC ACAATTAAAC TATCCTTCGT TTTCCATATT TGGACTTGGA 361 TCAACTCCTC AGACATATAC CAGAACTGTA ACCAATGTTG GTGATGCTAC ATCATCTTAC 421 AAAGTGGAGG TAGCTTCACC AGAAGGCGTT GCCATCGAAG TTGAACCCTC CGAGCTAAAT 481 TTCTCCGAGT TGA Predicted gene structure (within gDNA segment 16980 to 13388): Exon 1 15034 14591 ( 444 n); cDNA 50 493 ( 444 n); score: 0.878 MATCH C08HBa0165B06.1- SGN-E287935- 0.878 444 0.901 C PGS_C08HBa0165B06.1-_SGN-E287935- (15034 14591) Alignment (genomic DNA sequence = upper lines): CTGCTATTAA GTCTGCAATC ATGACAACCG CTTACACGTT AAACCTTGAC AGTAGTCCAA 14975 ||| |||||| ||||||||| |||||||| | || ||||||| |||||||| | |||||||| CTGTTATTAA GTCTGCAATG ATGACAACGG CTGACACGTT AAACCTTGCT AATAGTCCAA 109 TACTAGATGA AAGGTTACTT CCTGCAGACA TCTTTGCAAT TGGTGCAGGA CACGTTAATC 14915 |||| ||||| |||| | ||| ||||| |||| ||| |||||| |||||||||| || ||||||| TACTCGATGA AAGGCTCCTT CCTGCTGACA TCTATGCAAT TGGTGCAGGA CATGTTAATC 169 CATCAAGTGC AAATGATCCA GGACTAGTTT ATGATACCCC CTCCGAGGAC TACTTCCCGT 14855 ||||||| || |||||||||| |||||||||| ||||||| || | ||||||| || | || | CATCAAGGGC AAATGATCCA GGACTAGTTT ATGATACACC ATTCGAGGAC TATGTACCTT 229 ATTTATGTGG TTTGGGATAC ACAAATGCAC AGGTAAGTAG CCTGTTACGA CGCACAGTGA 14795 |||||||||| |||| ||| ||| || || ||||| ||| |||| ||| | |||| |||| ATTTATGTGG TTTGAAGTAC ACAGATCAAC AGGTAGGTAA CCTGATACAA CGCAGGGTGA 289 ATTGCTTGGA AGTGAATAGT ATCCCTGAAG CACAATTAAA CTATCCTTCT TTTTCCATAT 14735 |||||| ||| ||||| ||| |||| ||||| |||||||||| ||||||||| |||||||||| ATTGCTCGGA GGTGAAAAGT ATCCTTGAAG CACAATTAAA CTATCCTTCG TTTTCCATAT 349 ATGGACTTGG ATCAACTCCT CAGACATATA CAAGAACTGT GACCAACGTT GGTGATGCTA 14675 ||||||||| |||||||||| |||||||||| | |||||||| ||||| ||| |||||||||| TTGGACTTGG ATCAACTCCT CAGACATATA CCAGAACTGT AACCAATGTT GGTGATGCTA 409 CATCATCTTA CAAAGTGAAG ATAGCTTCAC TTATAGGAGT TGCCGTAGAA GTTGTACCCA 14615 |||||||||| ||||||| || ||||||||| ||| || |||| | ||| |||| |||| CATCATCTTA CAAAGTGGAG GTAGCTTCAC CAGAAGGCGT TGCCATCGAA GTTGAACCCT 469 CAGAGCTAAA TTTCTCCGAG TTGA 14591 | |||||||| |||||||||| |||| CCGAGCTAAA TTTCTCCGAG TTGA 493 hqPGS_C08HBa0165B06.1-_SGN-E287935- (15034 14591) ******************************************************************************** EST sequence 212 +strand 708 n (File: SGN-E213673+) 1 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 61 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 121 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 181 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 241 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 301 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 361 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 421 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 481 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 541 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 601 CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 661 ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAACT Predicted gene structure (within gDNA segment 16004 to 13997): Exon 1 15404 14697 ( 708 n); cDNA 1 708 ( 708 n); score: 0.917 MATCH C08HBa0165B06.1- SGN-E213673+ 0.917 708 1.000 C PGS_C08HBa0165B06.1-_SGN-E213673+ (15404 14697) Alignment (genomic DNA sequence = upper lines): TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 15345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 60 CTTGATTATA CCAACTCAAT ATCGAACCCT ATTGCTACAA TCACAATCCA AGGAACAGTA 15285 | || |||| | |||||||| |||||||||| ||||||||| |||||||||| |||||||||| CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 120 ATTGGAGATA AAAATGCTCC CATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 15225 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 180 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 15165 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 240 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 15105 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 300 TCGATGTCTT GCCCACACCT TAGTGGCATA GCAGCTCTGC TGAAGAGCAC ACATCCTGAT 15045 |||||||||| |||||||||| |||||| || |||||||||| ||||||| || |||||||||| TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 360 TGGTCTCCTG CTGCTATTAA GTCTGCAATC ATGACAACCG CTTACACGTT AAACCTTGAC 14985 |||||||||| ||| |||||| ||||||||| |||||||||| || |||| || |||||||| | TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 420 AGTAGTCCAA TACTAGATGA AAGGTTACTT CCTGCAGACA TCTTTGCAAT TGGTGCAGGA 14925 |||||||||| |||| || | |||| | | | ||||| || | ||| |||||| ||||||||| AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 480 CACGTTAATC CATCAAGTGC AAATGATCCA GGACTAGTTT ATGATACCCC CTCCGAGGAC 14865 || ||||||| |||| || || |||||||||| |||||||||| |||||||||| | ||||| CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 540 TACTTCCCGT ATTTATGTGG TTTGGGATAC ACAAATGCAC AGGTAAGTAG CCTGTTACGA 14805 || | || | |||||||||| |||| ||| |||||| ||| ||||| ||| |||||||| TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 600 CGCACAGTGA ATTGCTTGGA AGTGAATAGT ATCCCTGAAG CACAATTAAA CTATCCTTCT 14745 |||| |||| |||||| ||| || | ||| |||||||||| |||||||||| |||||||| CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 660 TTTTCCATAT ATGGACTTGG ATCAACTCCT CAGACATATA CAAGAACT 14697 ||| ||||| ||||||| |||||||||| |||||||| | | |||||| ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAACT 708 hqPGS_C08HBa0165B06.1-_SGN-E213673+ (15404 14697) ******************************************************************************** EST sequence 173 +strand 634 n (File: SGN-E213088+) 1 AAAATTCGTG CCTATACAAA CTCAATATCG AACCCTGTTG CTACAATCAC AATCCAAGGA 61 ACAGTAATTG GAGATAAAAA TGCTCCAATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 121 AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 181 GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 241 GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGGGTAGCAG CTCTGCTGAA GAGAACACAT 301 CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA CACATTAAAC 361 CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA TGCAATAGGT 421 GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACCCCATTT 481 GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT AGGTAAATTG 541 TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 601 CCTTCATTTT GCATATCGAG ACTTGGATCA ACTC Predicted gene structure (within gDNA segment 16112 to 13846): Exon 1 15350 14717 ( 634 n); cDNA 1 634 ( 634 n); score: 0.913 MATCH C08HBa0165B06.1- SGN-E213088+ 0.913 634 1.000 C PGS_C08HBa0165B06.1-_SGN-E213088+ (15350 14717) Alignment (genomic DNA sequence = upper lines): AAAATTCTTG ATTATACCAA CTCAATATCG AACCCTATTG CTACAATCAC AATCCAAGGA 15291 ||||||| || ||||| || |||||||||| |||||| ||| |||||||||| |||||||||| AAAATTCGTG CCTATACAAA CTCAATATCG AACCCTGTTG CTACAATCAC AATCCAAGGA 60 ACAGTAATTG GAGATAAAAA TGCTCCCATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 15231 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ACAGTAATTG GAGATAAAAA TGCTCCAATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 120 AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 15171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 180 GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 15111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 240 GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGCATAGCAG CTCTGCTGAA GAGCACACAT 15051 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| ||| |||||| GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGGGTAGCAG CTCTGCTGAA GAGAACACAT 300 CCTGATTGGT CTCCTGCTGC TATTAAGTCT GCAATCATGA CAACCGCTTA CACGTTAAAC 14991 |||||||||| ||||||||| |||||||||| ||||| |||| |||||||| | ||| |||||| CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA CACATTAAAC 360 CTTGACAGTA GTCCAATACT AGATGAAAGG TTACTTCCTG CAGACATCTT TGCAATTGGT 14931 |||| ||||| |||||||||| || ||||| | | ||||| | || |||| |||||| ||| CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA TGCAATAGGT 420 GCAGGACACG TTAATCCATC AAGTGCAAAT GATCCAGGAC TAGTTTATGA TACCCCCTCC 14871 |||||||| | |||||||||| || |||||| |||||||||| |||||||||| |||||| | GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACCCCATTT 480 GAGGACTACT TCCCGTATTT ATGTGGTTTG GGATACACAA ATGCACAGGT AAGTAGCCTG 14811 ||||| || | || ||||| |||||||||| ||||||| || ||||||| | ||| || GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT AGGTAAATTG 540 TTACGACGCA CAGTGAATTG CTTGGAAGTG AATAGTATCC CTGAAGCACA ATTAAACTAT 14751 |||||||||| |||||||| || ||| || | ||||||| |||||||||| |||||||||| TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 600 CCTTCTTTTT CCATATATGG ACTTGGATCA ACTC 14717 ||||| |||| ||||| | |||||||||| |||| CCTTCATTTT GCATATCGAG ACTTGGATCA ACTC 634 hqPGS_C08HBa0165B06.1-_SGN-E213088+ (15350 14717) ******************************************************************************** EST sequence 191 +strand 704 n (File: SGN-E212584+) 1 AAGATAGTAT TATGTTTAGC ATTCGGCGGT GTAGCCAATG TTGATAAAGG ACAAGCTGTG 61 AAGGATGCTG GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA 121 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 181 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 241 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 301 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 361 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 421 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 481 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 541 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 601 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 661 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGT Predicted gene structure (within gDNA segment 16529 to 13725): Exon 1 15488 14821 ( 668 n); cDNA 37 704 ( 668 n); score: 0.939 MATCH C08HBa0165B06.1- SGN-E212584+ 0.939 668 0.949 C PGS_C08HBa0165B06.1-_SGN-E212584+ (15488 14821) Alignment (genomic DNA sequence = upper lines): AATATTGAAA AAGGACAAGC TGTGAAGGAT GCTGGAGGTG TTGGCATGAT TGTCATCAAC 15429 ||| |||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTTGATA AAGGACAAGC TGTGAAGGAT GCTGGAGGTG TTGGCATGAT TGTCATCAAC 96 CCATCACAAT ATGGTGTCAC TAAATCAGCT GATGCTCATG TTCTTCCAGC ATTGGTTGTT 15369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCACAAT ATGGTGTCAC TAAATCAGCT GATGCTCATG TTCTTCCAGC ATTGGTTGTT 156 TCAGCTGCAG ATGGAAGCAA AATTCTTGAT TATACCAACT CAATATCGAA CCCTATTGCT 15309 |||||||||| |||||||||| ||||| || ||||| |||| |||||||||| |||| ||||| TCAGCTGCAG ATGGAAGCAA AATTCGTGCC TATACAAACT CAATATCGAA CCCTGTTGCT 216 ACAATCACAA TCCAAGGAAC AGTAATTGGA GATAAAAATG CTCCCATAGT TGCTGCATTT 15249 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ACAATCACAA TCCAAGGAAC AGTAATTGGA GATAAAAATG CTCCAATAGT TGCTGCATTT 276 TCTTCTCGCG GACCAAGTAA ACCTAATCCT GGGATCTTGA AACCTGACAT AATTGGTCCT 15189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTCGCG GACCAAGTAA ACCTAATCCT GGGATCTTGA AACCTGACAT AATTGGTCCT 336 GGTGTTAATA TCCTCGCTGC TTGGCCTACT TCTGTGGATG ACAACAAGGA CACCAAATCC 15129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTAATA TCCTCGCTGC TTGGCCTACT TCTGTGGATG ACAACAAGGA CACCAAATCC 396 ACATTCAATA TTATATCAGG CACCTCGATG TCTTGCCCAC ACCTTAGTGG CATAGCAGCT 15069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACATTCAATA TTATATCAGG CACCTCGATG TCTTGCCCAC ACCTTAGTGG GGTAGCAGCT 456 CTGCTGAAGA GCACACATCC TGATTGGTCT CCTGCTGCTA TTAAGTCTGC AATCATGACA 15009 |||||||||| | |||||||| |||||||||| ||||||| || |||||||||| ||| |||||| CTGCTGAAGA GAACACATCC TGATTGGTCT CCTGCTGTTA TTAAGTCTGC AATGATGACA 516 ACCGCTTACA CGTTAAACCT TGACAGTAGT CCAATACTAG ATGAAAGGTT ACTTCCTGCA 14949 |||||| ||| | |||||||| || ||||||| |||||||| | | ||||| | | |||||| ACCGCTGACA CATTAAACCT TGCCAGTAGT CCAATACTCG ACCAAAGGCT CCGTCCTGCT 576 GACATCTTTG CAATTGGTGC AGGACACGTT AATCCATCAA GTGCAAATGA TCCAGGACTA 14889 || |||| || |||| ||||| |||||| ||| |||||||| | | |||||||| |||||||||| GATATCTATG CAATAGGTGC AGGACATGTT AATCCATCGA GGGCAAATGA TCCAGGACTA 636 GTTTATGATA CCCCCTCCGA GGACTACTTC CCGTATTTAT GTGGTTTGGG ATACACAAAT 14829 |||||||||| |||| | || ||| || | || ||||||| |||||||| ||||||||| GTTTATGATA CCCCATTTGA GGATTATGTA CCTTATTTAT GTGGTTTGAA CTACACAAAT 696 GCACAGGT 14821 ||||||| CCACAGGT 704 hqPGS_C08HBa0165B06.1-_SGN-E212584+ (15488 14821) ******************************************************************************** EST sequence 283 +strand 605 n (File: SGN-E308535+) 1 GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 61 AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 121 GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 181 GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 241 TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 301 GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 361 ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 421 ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 481 AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 541 ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAAGT TACTTCCTGC AGACATCTTT 601 GCAAT Predicted gene structure (within gDNA segment 16670 to 14325): Exon 1 15539 14935 ( 605 n); cDNA 1 605 ( 605 n); score: 0.921 MATCH C08HBa0165B06.1- SGN-E308535+ 0.921 605 1.000 C PGS_C08HBa0165B06.1-_SGN-E308535+ (15539 14935) Alignment (genomic DNA sequence = upper lines): GACCCTGCAA TAAAAGGAAA GATAGCCATA TGTCAGGCAG GTGTCGTTTC AAATATTGAA 15480 |||||||||| |||||||||| ||||| |||| ||| | ||| |||||||||| || ||| | GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 60 AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGCATGA TTGTCATCAA CCCATCACAA 15420 |||||||||| |||||||||| |||||||||| ||||| |||| ||| |||||| || || || AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 120 TATGGTGTCA CTAAATCAGC TGATGCTCAT GTTCTTCCAG CATTGGTTGT TTCAGCTGCA 15360 ||||||||| | |||||||| |||||||||| |||||||||| | |||| || |||||||||| GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 180 GATGGAAGCA AAATTCTTGA TTATACCAAC TCAATATCGA ACCCTATTGC TACAATCACA 15300 ||||||| || ||||||| |||||| ||| |||||||| | |||||| || || ||||||| GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 240 ATCCAAGGAA CAGTAATTGG AGATAAAAAT GCTCCCATAG TTGCTGCATT TTCTTCTCGC 15240 ||||||||| || ||||||| |||| |||| |||||||||| ||||| |||| |||||||||| TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 300 GGACCAAGTA AACCTAATCC TGGGATCTTG AAACCTGACA TAATTGGTCC TGGTGTTAAT 15180 ||||||| || |||||| ||| ||| |||||| |||||||||| |||| ||||| |||||||||| GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 360 ATCCTCGCTG CTTGGCCTAC TTCTGTGGAT GACAACAAGG ACACCAAATC CACATTCAAT 15120 ||||| |||| |||||||||| || |||||| |||||||| | |||||||| |||||||||| ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 420 ATTATATCAG GCACCTCGAT GTCTTGCCCA CACCTTAGTG GCATAGCAGC TCTGCTGAAG 15060 |||||||||| |||||||||| ||||||||| |||||||||| || ||||||| |||||||||| ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 480 AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 15000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 540 ACGTTAAACC TTGACAGTAG TCCAATACTA GATGAAAGGT TACTTCCTGC AGACATCTTT 14940 || ||||||| ||| |||||| |||||||||| ||||||| || |||||||||| |||||||||| ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAAGT TACTTCCTGC AGACATCTTT 600 GCAAT 14935 ||||| GCAAT 605 hqPGS_C08HBa0165B06.1-_SGN-E308535+ (15539 14935) ******************************************************************************** EST sequence 358 +strand 663 n (File: SGN-E397025+) 1 TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 61 GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 121 ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 181 GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 241 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 301 GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 361 ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 421 TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGTCCTGGT 481 GCTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAGAACAC CAAATCCACA 541 TTCAATATCA TATCAGGCAC CTCAATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 601 CTGAAATGCA CACATCCTGA TTGGTCTCCT GCTGTTATTA AATCTGCAAT GATGACAACG 661 GCT Predicted gene structure (within gDNA segment 17072 to 14132): Exon 1 15662 15003 ( 660 n); cDNA 1 663 ( 663 n); score: 0.872 MATCH C08HBa0165B06.1- SGN-E397025+ 0.872 660 0.995 C PGS_C08HBa0165B06.1-_SGN-E397025+ (15662 15003) Alignment (genomic DNA sequence = upper lines): TTTGAAGGGG AATCTGCTTA TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT 15603 |||||||| | |||||||||| ||||||| || |||||| || | |||| ||| |||||||| | TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 60 GATGCTGCAA AAAGTATAGG TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC 15543 |||||||||| ||| | | |||||||| |||||||||| |||||| || ||| |||||| GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 120 ACTGACCCTG CAATAAAAGG AAAGATAGCC ATATG-TCAG -GC-AGGTGT CGTTTCAAAT 15486 |||||||||| | |||| ||| |||||||| |||| |||| | || || | ||| ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 180 ATTGAAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 15426 |||| |||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 240 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 15366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 300 GCTGCAGATG GAAGCAAAAT TCTTGATTAT ACCAACTCAA TATCGAACCC TATTGCTACA 15306 |||||||| | ||| ||||| ||||| ||| | ||||||| ||| | ||| | |||||||| GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 360 ATCACAATCC AAGGAACAGT AATTGGAGAT AAAAATGCTC CCATAGTTGC TGCATTTTCT 15246 || || ||| |||||||| | ||||||||| |||||||||| | || ||||| ||||||||| ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 420 TCTCGCGGAC CAAGTAAACC TAATCCTGGG ATCTTGAAAC CTGACATAAT TGGTCCTGGT 15186 || | |||| |||||| | | || |||||| |||||||| | |||||||||| ||||||||| TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGTCCTGGT 480 GTTAATATCC TCGCTGCTTG GCCTACTTCT GTGGATGACA ACAAGGACAC CAAATCCACA 15126 | |||||||| | |||||||| |||||| || |||||||||| ||||| |||| |||||||||| GCTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAGAACAC CAAATCCACA 540 TTCAATATTA TATCAGGCAC CTCGATGTCT TGCCCACACC TTAGTGGCAT AGCAGCTCTG 15066 |||||||| | |||||||||| ||| |||||| ||||| |||| |||||||| | |||||||||| TTCAATATCA TATCAGGCAC CTCAATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 600 CTGAAGAGCA CACATCCTGA TTGGTCTCCT GCTGCTATTA AGTCTGCAAT CATGACAACC 15006 ||||| ||| |||||||||| |||||||||| |||| ||||| | |||||||| |||||||| CTGAAATGCA CACATCCTGA TTGGTCTCCT GCTGTTATTA AATCTGCAAT GATGACAACG 660 GCT 15003 ||| GCT 663 hqPGS_C08HBa0165B06.1-_SGN-E397025+ (15662 15003) ******************************************************************************** EST sequence 164 +strand 617 n (File: SGN-E306389+) 1 ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 61 GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 121 AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 181 GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAAGT TGTAAAAGGA 241 CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 301 GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 361 ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 421 GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 481 AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 541 GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 601 TCANGCACCT CGATGTC Predicted gene structure (within gDNA segment 16358 to 13785): Exon 1 15713 15097 ( 617 n); cDNA 1 617 ( 617 n); score: 0.906 MATCH C08HBa0165B06.1- SGN-E306389+ 0.906 617 1.000 C PGS_C08HBa0165B06.1-_SGN-E306389+ (15713 15097) Alignment (genomic DNA sequence = upper lines): ACTATTGATA GAAAGATAAA AGCCACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 15654 |||| ||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 60 GAATCTGCTT ATCGTCCACA GATTTCCGAC TCTACATACT TCACTCTATA TGATGCTGCA 15594 ||| || ||| |||||||||| |||||||||| || | || || ||||||| || ||||||| || GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 120 AAAAGTATAG GTGATCCATC TGAAACCCCT TATTGCAAAC CAGGGTCACT CACTGACCCT 15534 ||| ||| || |||||||||| | |||||||| || ||||||| |||||||||| |||||||||| AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 180 GCAATAAAAG GAAAGATAGC CATATGTCAG GCAGGTGTCG TTTCAAATAT TGAAAAAGGA 15474 |||||||||| ||||||||| ||||||| | ||||||||| |||| || | || ||||||| GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAAGT TGTAAAAGGA 240 CAAGCTGTGA AGGATGCTGG AGGTGTTGGC ATGATTGTCA TCAACCCATC ACAATATGGT 15414 |||||||||| |||||||||| ||||||||| ||||||| || |||||| | | || ||||| CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 300 GTCACTAAAT CAGCTGATGC TCATGTTCTT CCAGCATTGG TTGTTTCAGC TGCAGATGGA 15354 ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||| |||||||||| GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 360 AGCAAAATTC TTGATTATAC CAACTCAATA TCGAACCCTA TTGCTACAAT CACAATCCAA 15294 | || ||||| || |||||| ||||||||| || ||||||| |||| ||| |||| ||||| ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 420 GGAACAGTAA TTGGAGATAA AAATGCTCCC ATAGTTGCTG CATTTTCTTC TCGCGGACCA 15234 |||||| ||| |||||||| | ||| |||||| ||||||||| |||||||||| |||||||||| GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 480 AGTAAACCTA ATCCTGGGAT CTTGAAACCT GACATAATTG GTCCTGGTGT TAATATCCTC 15174 | |||||||| |||||| || |||||||||| |||||||| | |||||||||| ||||||||| AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 540 GCTGCTTGGC CTACTTCTGT GGATGACAAC AAGGACACCA AATCCACATT CAATATTATA 15114 |||||||||| |||| || || |||||||||| || | |||| |||||||||| |||||||||| GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 600 TCAGGCACCT CGATGTC 15097 ||| |||||| ||||||| TCANGCACCT CGATGTC 617 hqPGS_C08HBa0165B06.1-_SGN-E306389+ (15713 15097) ******************************************************************************** EST sequence 221 +strand 771 n (File: SGN-E540271+) 1 TTTTAGCTGC CATGGATGCA GCTATAGATG ATGGTGTAGA TATTCTTTCA ATCTCCCTTG 61 GTGGAAGTAC AAAACCTTTC CATGATGATG GTATTGCTCT CGGGACGTAC AGTGCAACAG 121 AAAGAGGTAT TTTTGTAAGT GCCTCAGCAG GCAATAGCGG TCCGTCGCTT GGCACTGTAG 181 CTAATGAAGC CCCGTGGATT CTCACTGTTG GTGCCAGTAC TCATGATAGA AAACTGAAGG 241 TTACTGTTAA GCTTGGAAAT AGCGAGGAAT TTGAAGGAGA ATCTGCTTAT CATCCAAAGA 301 CTTCCAACTC AACATTCTTC CCTCTATATG ATGCTGGAAA GAATGAAAGT GATCAATTTA 361 GCGCGCCTTT TTGTAGTCCA GGCTCACTTA ATGACCCTGC TATCAAAGGT AAGATAGTCT 421 TGTGTTTGCG AAGTATAAGT CTTCTCAGAG TTGCTCAAGG ACAATCCGTA AAGGATGCTG 481 GAGGTGTTGG CATGATTCTC ATCAATGAAC AAGAAGAGGG TGTGACTAAA TCAGCTGAAG 541 CTCATGTCCT TCCTGCATTG GATGTTTCAA ATGCTGATGG AAAGAAAATT CTTGCCTATA 601 TGAACTCATC TTCAAATCCG GTTGCTTCAA TCACCTTCCA TGGAACTGTA ATTGGAGACA 661 AAAATGCTCC TATAGTTGCT TCATTTTCCT CACGAGGACC AAGCGTAGCA AGTCCTGGCA 721 TCTTAAAACC TGACATAATC GGTCCTGGTG TTAACGTCCT TGCTGCTTGG C Predicted gene structure (within gDNA segment 16531 to 8080): Exon 1 15931 15164 ( 768 n); cDNA 1 771 ( 771 n); score: 0.781 MATCH C08HBa0165B06.1- SGN-E540271+ 0.781 768 0.996 C PGS_C08HBa0165B06.1-_SGN-E540271+ (15931 15164) Alignment (genomic DNA sequence = upper lines): TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTG 15872 |||||||||| ||||||| || |||||||||| |||| ||||| |||||||||| || ||||||| TTTTAGCTGC CATGGATGCA GCTATAGATG ATGGTGTAGA TATTCTTTCA ATCTCCCTTG 60 GTGGAAGTCC AGTTCCTTTC TATGAAGACA GTATTGCTTT CGGGGCCTAT GCTGCAACAG 15812 |||||||| | | |||||| |||| || |||||||| | |||| | || |||||||| GTGGAAGTAC AAAACCTTTC CATGATGATG GTATTGCTCT CGGGACGTAC AGTGCAACAG 120 AAAGAGGGAT TCTTGTGAGT TGCTCTGCTG GAAATAGTGG TCCATCCTAC ATCACAGCAT 15752 ||||||| || | |||| ||| ||| || | | ||||| || ||| || ||| | | AAAGAGGTAT TTTTGTAAGT GCCTCAGCAG GCAATAGCGG TCCGTCGCTT GGCACTGTAG 180 CAAACACAGC CCCTTGGATT CTTACGGTAG GAGCCAGCAC TATTGATAGA AAGATAAAAG 15692 | || ||| ||| |||||| || || || | | ||||| || | ||||||| || | || | CTAATGAAGC CCCGTGGATT CTCACTGTTG GTGCCAGTAC TCATGATAGA AAACTGAAGG 240 CCACTGTTAC ACTTGGAAAT ACAGAGGAAT TTGAAGGGGA ATCTGCTTAT CGTCCACAGA 15632 ||||||| ||||||||| | ||||||| ||||||| || |||||||||| | |||| ||| TTACTGTTAA GCTTGGAAAT AGCGAGGAAT TTGAAGGAGA ATCTGCTTAT CATCCAAAGA 300 TTTCCGACTC TACATACTTC ACTCTATATG ATGCTGCAAA AAGTATAGGT GATCCATCTG 15572 |||| |||| |||| |||| ||||||||| |||||| ||| | | | || |||| || | CTTCCAACTC AACATTCTTC CCTCTATATG ATGCTGGAAA GAATGAAAGT GATCAATTTA 360 AAACCCCTTA TTGCAAACCA GGGTCACTCA CTGACCCTGC AATAAAAGGA AAGATAGCCA 15512 | |||| ||| | ||| || ||||| | ||||||||| || ||||| ||||||| | GCGCGCCTTT TTGTAGTCCA GGCTCACTTA ATGACCCTGC TATCAAAGGT AAGATAGTCT 420 TATGTCAGGC AGGTGT-CGT -TTCAAATA- TTGAAAAAGG ACAAGCTGTG AAGGATGCTG 15455 | ||| | | || | || ||| | | ||| |||| |||| | || |||||||||| TGTGTTTGCG AAGTATAAGT CTTCTCAGAG TTGCTCAAGG ACAATCCGTA AAGGATGCTG 480 GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 15395 |||||||||| ||||||| || ||||| | | || | || ||| |||||| |||||||| | GAGGTGTTGG CATGATTCTC ATCAATGAAC AAGAAGAGGG TGTGACTAAA TCAGCTGAAG 540 CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT CTTGATTATA 15335 ||||||| || ||| |||||| | ||||||| ||| ||||| || |||||| |||| |||| CTCATGTCCT TCCTGCATTG GATGTTTCAA ATGCTGATGG AAAGAAAATT CTTGCCTATA 600 CCAACTCAAT ATCGAACCCT ATTGCTACAA TCACAATCCA AGGAACAGTA ATTGGAGATA 15275 |||||| || || || ||||| ||| |||| |||| ||||| ||| |||||||| | TGAACTCATC TTCAAATCCG GTTGCTTCAA TCACCTTCCA TGGAACTGTA ATTGGAGACA 660 AAAATGCTCC CATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT AATCCTGGGA 15215 |||||||||| ||||||||| ||||||| | | || ||||| ||| | | | |||||| | AAAATGCTCC TATAGTTGCT TCATTTTCCT CACGAGGACC AAGCGTAGCA AGTCCTGGCA 720 TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG C 15164 |||| ||||| ||||||||| |||||||||| |||| |||| ||||||||| | TCTTAAAACC TGACATAATC GGTCCTGGTG TTAACGTCCT TGCTGCTTGG C 771 hqPGS_C08HBa0165B06.1-_SGN-E540271+ (15931 15164) ******************************************************************************** EST sequence 265 +strand 362 n (File: SGN-E200689+) 1 GGAAAGATAG TATTATGTTT AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT 61 GTGAAGGATG CTGGAGGTGT TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT 121 AAATCAGCTG ATGCTCATGT TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA 181 ATTCGTGCCT ATACAAACTC AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA 241 GTAATTGGAG ATAAAAATGC TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA 301 CCTAATCCTG GGATCTTGAA ACCTGACATA ATTGGTCCTG GTGTTAATAT CCTCGCTGCT 361 TG Predicted gene structure (within gDNA segment 16559 to 14556): Exon 1 15488 15166 ( 323 n); cDNA 40 362 ( 323 n); score: 0.975 MATCH C08HBa0165B06.1- SGN-E200689+ 0.975 323 0.892 C PGS_C08HBa0165B06.1-_SGN-E200689+ (15488 15166) Alignment (genomic DNA sequence = upper lines): AATATTGAAA AAGGACAAGC TGTGAAGGAT GCTGGAGGTG TTGGCATGAT TGTCATCAAC 15429 ||| |||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTTGATA AAGGACAAGC TGTGAAGGAT GCTGGAGGTG TTGGCATGAT TGTCATCAAC 99 CCATCACAAT ATGGTGTCAC TAAATCAGCT GATGCTCATG TTCTTCCAGC ATTGGTTGTT 15369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCACAAT ATGGTGTCAC TAAATCAGCT GATGCTCATG TTCTTCCAGC ATTGGTTGTT 159 TCAGCTGCAG ATGGAAGCAA AATTCTTGAT TATACCAACT CAATATCGAA CCCTATTGCT 15309 |||||||||| |||||||||| ||||| || ||||| |||| |||||||||| |||| ||||| TCAGCTGCAG ATGGAAGCAA AATTCGTGCC TATACAAACT CAATATCGAA CCCTGTTGCT 219 ACAATCACAA TCCAAGGAAC AGTAATTGGA GATAAAAATG CTCCCATAGT TGCTGCATTT 15249 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ACAATCACAA TCCAAGGAAC AGTAATTGGA GATAAAAATG CTCCAATAGT TGCTGCATTT 279 TCTTCTCGCG GACCAAGTAA ACCTAATCCT GGGATCTTGA AACCTGACAT AATTGGTCCT 15189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTCGCG GACCAAGTAA ACCTAATCCT GGGATCTTGA AACCTGACAT AATTGGTCCT 339 GGTGTTAATA TCCTCGCTGC TTG 15166 |||||||||| |||||||||| ||| GGTGTTAATA TCCTCGCTGC TTG 362 hqPGS_C08HBa0165B06.1-_SGN-E200689+ (15488 15166) ******************************************************************************** EST sequence 150 +strand 490 n (File: SGN-E282432+) 1 TTTGAAGGAT TTTTTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 61 GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 121 ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 181 GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 241 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 301 GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 361 ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 421 TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGGCCTGGT 481 GCTAATATCC Predicted gene structure (within gDNA segment 17072 to 12928): Exon 1 15662 15176 ( 487 n); cDNA 1 490 ( 490 n); score: 0.845 MATCH C08HBa0165B06.1- SGN-E282432+ 0.845 487 0.994 C PGS_C08HBa0165B06.1-_SGN-E282432+ (15662 15176) Alignment (genomic DNA sequence = upper lines): TTTGAAGGGG AATCTGCTTA TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT 15603 |||||||| | |||||| ||||||| || |||||| || | |||| ||| |||||||| | TTTGAAGGAT TTTTTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 60 GATGCTGCAA AAAGTATAGG TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC 15543 |||||||||| ||| | | |||||||| |||||||||| |||||| || ||| |||||| GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 120 ACTGACCCTG CAATAAAAGG AAAGATAGCC ATATG-TCAG -GC-AGGTGT CGTTTCAAAT 15486 |||||||||| | |||| ||| |||||||| |||| |||| | || || | ||| ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 180 ATTGAAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 15426 |||| |||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 240 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 15366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 300 GCTGCAGATG GAAGCAAAAT TCTTGATTAT ACCAACTCAA TATCGAACCC TATTGCTACA 15306 |||||||| | ||| ||||| ||||| ||| | ||||||| ||| | ||| | |||||||| GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 360 ATCACAATCC AAGGAACAGT AATTGGAGAT AAAAATGCTC CCATAGTTGC TGCATTTTCT 15246 || || ||| |||||||| | ||||||||| |||||||||| | || ||||| ||||||||| ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 420 TCTCGCGGAC CAAGTAAACC TAATCCTGGG ATCTTGAAAC CTGACATAAT TGGTCCTGGT 15186 || | |||| |||||| | | || |||||| |||||||| | |||||||||| || |||||| TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGGCCTGGT 480 GTTAATATCC 15176 | |||||||| GCTAATATCC 490 hqPGS_C08HBa0165B06.1-_SGN-E282432+ (15662 15176) ******************************************************************************** EST sequence 370 +strand 494 n (File: SGN-E210009+) 1 TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 61 CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 121 TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 181 AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 241 TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 301 TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 361 AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 421 TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 481 ACCTGACATA ATTG Predicted gene structure (within gDNA segment 18159 to 14584): Exon 1 15684 15194 ( 491 n); cDNA 1 494 ( 494 n); score: 0.901 MATCH C08HBa0165B06.1- SGN-E210009+ 0.901 491 0.994 C PGS_C08HBa0165B06.1-_SGN-E210009+ (15684 15194) Alignment (genomic DNA sequence = upper lines): TACACTTGGA AATACAGAGG AATTTGAAGG GGAATCTGCT TATCGTCCAC AGATTTCCGA 15625 || || ||| ||| ||||| |||||||||| ||||||||| ||||||||| |||||||| | TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 60 CTCTACATAC TTCACTCTAT ATGATGCTGC AAAAAGTATA GGTGATCCAT CTGAAACCCC 15565 ||| |||| | |||||||||| ||||||||| ||||| | | ||||||| |||||||||| CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 120 TTATTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG CCATATGTCA 15505 |||||||| | | |||||||| |||||||||| ||| |||| | |||||||||| ||||| TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 180 GGCA---GGT GTCGTTTCAA ATATTGAAAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 15448 ||| || | || | | || |||| || |||||||||| |||||||||| |||||||||| AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 240 TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 15388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 300 TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCTTGATT ATACCAACTC 15328 |||||||||| |||||||||| |||||||||| |||||||||| |||| || | |||| ||||| TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 360 AATATCGAAC CCTATTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 15268 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 420 TCCCATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 15208 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 480 ACCTGACATA ATTG 15194 |||||||||| |||| ACCTGACATA ATTG 494 hqPGS_C08HBa0165B06.1-_SGN-E210009+ (15684 15194) ******************************************************************************** EST sequence 233 +strand 504 n (File: SGN-E301429+) 1 CGCCCCTTGG ATTCTTACGG TAGGCGCCAG CACTACTGAT AGAAAGATAA AAGTTACTGT 61 TACACTTGGA AATACAGAGG AATTTGAAGG GGAAGCTTCT TATCGTCCAC AGATTTCCGA 121 CTCAAAATTC TTCACTCTGT ATGATGCTTC AAAAGGTAAA GGTGATCCAT CTAAAACCCC 181 TTACTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG TCATATGTTA 241 TCCAGGTGTC GTTTCTAAGG TTGTAAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG 301 TATGATTGCC ATCAACCTGC CAGAAGATGG TGTCACAAAA TCAGCTGATG CTCATGTTCT 361 TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT CTTACTTATA CAAACTCAAT 421 ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA ATTGGAGATG AAAACGCTCC 481 CATAGTTGCT TCATTTTCTT CTCG Predicted gene structure (within gDNA segment 16353 to 13623): Exon 1 15743 15241 ( 503 n); cDNA 2 504 ( 503 n); score: 0.905 MATCH C08HBa0165B06.1- SGN-E301429+ 0.905 503 0.998 C PGS_C08HBa0165B06.1-_SGN-E301429+ (15743 15241) Alignment (genomic DNA sequence = upper lines): GCCCCTTGGA TTCTTACGGT AGGAGCCAGC ACTATTGATA GAAAGATAAA AGCCACTGTT 15684 |||||||||| |||||||||| ||| |||||| |||| ||||| |||||||||| || |||||| GCCCCTTGGA TTCTTACGGT AGGCGCCAGC ACTACTGATA GAAAGATAAA AGTTACTGTT 61 ACACTTGGAA ATACAGAGGA ATTTGAAGGG GAATCTGCTT ATCGTCCACA GATTTCCGAC 15624 |||||||||| |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| ACACTTGGAA ATACAGAGGA ATTTGAAGGG GAAGCTTCTT ATCGTCCACA GATTTCCGAC 121 TCTACATACT TCACTCTATA TGATGCTGCA AAAAGTATAG GTGATCCATC TGAAACCCCT 15564 || | || || ||||||| || ||||||| || ||| ||| || |||||||||| | |||||||| TCAAAATTCT TCACTCTGTA TGATGCTTCA AAAGGTAAAG GTGATCCATC TAAAACCCCT 181 TATTGCAAAC CAGGGTCACT CACTGACCCT GCAATAAAAG GAAAGATAGC CATATGTCAG 15504 || ||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||| | TACTGCAAAC CAGGGTCACT CACTGACCCT GCAATAAAAG GAAAGATAGT CATATGTTAT 241 GCAGGTGTCG TTTCAAATAT TGAAAAAGGA CAAGCTGTGA AGGATGCTGG AGGTGTTGGC 15444 ||||||||| |||| || | || ||||||| |||||||||| |||||||||| ||||||||| CCAGGTGTCG TTTCTAAGGT TGTAAAAGGA CAAGCTGTGA AGGATGCTGG AGGTGTTGGT 301 ATGATTGTCA TCAACCCATC ACAATATGGT GTCACTAAAT CAGCTGATGC TCATGTTCTT 15384 ||||||| || |||||| | | || ||||| ||||| |||| |||||||||| |||||||||| ATGATTGCCA TCAACCTGCC AGAAGATGGT GTCACAAAAT CAGCTGATGC TCATGTTCTT 361 CCAGCATTGG TTGTTTCAGC TGCAGATGGA AGCAAAATTC TTGATTATAC CAACTCAATA 15324 ||||| |||| |||||||| |||||||||| | || ||||| || |||||| ||||||||| CCAGCTTTGG AGGTTTCAGC TGCAGATGGA ATCAGAATTC TTACTTATAC AAACTCAATA 421 TCGAACCCTA TTGCTACAAT CACAATCCAA GGAACAGTAA TTGGAGATAA AAATGCTCCC 15264 || ||||||| |||| ||| |||| ||||| |||||| ||| |||||||| | ||| |||||| TCAAACCCTA CAGCTAAAAT CACATTCCAA GGAACAATAA TTGGAGATGA AAACGCTCCC 481 ATAGTTGCTG CATTTTCTTC TCG 15241 ||||||||| |||||||||| ||| ATAGTTGCTT CATTTTCTTC TCG 504 hqPGS_C08HBa0165B06.1-_SGN-E301429+ (15743 15241) ******************************************************************************** EST sequence 199 +strand 655 n (File: SGN-E335107+) 1 TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 61 GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 121 AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 181 TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 241 CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 301 TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 361 AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 421 TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 481 GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 541 CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 601 TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG Predicted gene structure (within gDNA segment 16531 to 13968): Exon 1 15931 15280 ( 652 n); cDNA 1 655 ( 655 n); score: 0.867 MATCH C08HBa0165B06.1- SGN-E335107+ 0.867 652 0.995 C PGS_C08HBa0165B06.1-_SGN-E335107+ (15931 15280) Alignment (genomic DNA sequence = upper lines): TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTG 15872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 60 GTGGAAGTCC AGTTCCTTTC TATGAAGACA GTATTGCTTT CGGGGCCTAT GCTGCAACAG 15812 ||||| |||| | | |||||| || ||||| ||||||| | |||||| || |||||| | GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 120 AAAGAGGGAT TCTTGTGAGT TGCTCTGCTG GAAATAGTGG TCCATCCTAC ATCACAGCAT 15752 ||||||| || |||||| ||| || ||||||| |||||||||| |||||||| ||||||||| AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 180 CAAACACAGC CCCTTGGATT CTTACGGTAG GAGCCAGCAC TATTGATAGA AAGATAAAAG 15692 |||||| || |||||||||| |||||||||| | |||||||| |||| ||| |||||||||| TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 240 CCACTGTTAC ACTTGGAAAT ACAGAGGAAT TTGAAGGGGA ATCTGCTTAT CGTCCACAGA 15632 | |||||||| ||||||||| |||||||| ||||||| || |||||||||| |||||| ||| CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 300 TTTCCGACTC TACATACTTC ACTCTATATG ATGCTGCAAA AAGTATAGGT GATCCATCTG 15572 ||||| || | |||| |||| ||||||| || |||||||||| || | | |||||||| | TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 360 AAACCCCTTA TTGCAAACCA GGGTCACTCA CTGACCCTGC AATAAAAGGA AAGATAGCCA 15512 |||||||||| ||||| || | || ||||||| |||||||||| |||| |||| ||||||| AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 420 TATG-TCAG- GC-AGGTGTC GTTTCAAATA TTGAAAAAGG ACAAGCTGTG AAGGATGCTG 15455 |||| |||| | || || | ||| |||| ||||| |||||||||| |||||||||| TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 480 GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 15395 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 540 CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT CTTGATTATA 15335 |||||||||| |||||||||| |||||||||| ||||||| || || |||||| |||| ||| | CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 600 CCAACTCAAT ATCGAACCCT ATTGCTACAA TCACAATCCA AGGAACAGTA ATTGG 15280 ||||||| ||| | |||| ||||||||| | || |||| ||||||| || ||||| TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG 655 hqPGS_C08HBa0165B06.1-_SGN-E335107+ (15931 15280) ******************************************************************************** EST sequence 386 +strand 556 n (File: SGN-E208913+) 1 AAGTATTGCT CTCGGGGCGT ACAGTGCAAC ACAAAGAGGC ATTCTTGTTA GTTGCTCAGC 61 AGGCAATAAT GGTCCTTCGC CTGCCTCAGT AGATAACTCA GCCCCTTGGA TTCTTACAGT 121 AGGTGCCAGC ACGCTTGATA GAAAGATAAA AGCTACTGCT AAGCTCGGAA ATGGAGAGGA 181 ATTTGAAGGA GAATCTGCTT ATCGTCCAAA GATTTCCAAC TCAACATTCT TCACTCTATT 241 TGATGCTGCA AAAAATGCAA AAGATCCATC TGAAACCCCT TATTGCAGAC GAGGGTCACT 301 CACTGACCCT GCTATAAGAG GAAAGATAGT ATTATGTTTA GCATTCGGCG GTGTAGCCAA 361 TGTTGATAAA GGACAAGCTG TGAAGGATGC TGGAGGTGTT GGCATGATTG TCATCAACCC 421 ATCACAATAT GGTGTCACTA AATCAGCTGA TGCTCATGTT CTTCCAGCAT TTCTGGTTGT 481 TTCAGCTGCA GATGGAAGCA AAATTCGTGC CTATACAAAC TCAATATCGA ACCCTGTTGC 541 TACAATCACA ATCCAA Predicted gene structure (within gDNA segment 17325 to 14684): Exon 1 15842 15294 ( 549 n); cDNA 2 556 ( 555 n); score: 0.843 MATCH C08HBa0165B06.1- SGN-E208913+ 0.843 549 0.987 C PGS_C08HBa0165B06.1-_SGN-E208913+ (15842 15294) Alignment (genomic DNA sequence = upper lines): AGTATTGCTT TCGGGGCCTA TGCTGCAACA GAAAGAGGGA TTCTTGTGAG TTGCTCTGCT 15783 ||||||||| ||||||| || ||||||| ||||||| | ||||||| || |||||| || AGTATTGCTC TCGGGGCGTA CAGTGCAACA CAAAGAGGCA TTCTTGTTAG TTGCTCAGCA 61 GGAAATAGTG GTCCATCCTA CATCACAGCA TCAAACACAG CCCCTTGGAT TCTTACGGTA 15723 || |||| || |||| || | ||| | ||| ||| |||||||||| |||||| ||| GGCAATAATG GTCCTTCGCC TGCCTCAGTA GATAACTCAG CCCCTTGGAT TCTTACAGTA 121 GGAGCCAGCA CTATTGATAG AAAGATAAAA GCCACTGTTA CACTTGGAAA TACAGAGGAA 15663 || ||||||| | ||||||| |||||||||| || |||| || || ||||| | ||||||| GGTGCCAGCA CGCTTGATAG AAAGATAAAA GCTACTGCTA AGCTCGGAAA TGGAGAGGAA 181 TTTGAAGGGG AATCTGCTTA TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT 15603 |||||||| | |||||||||| ||||||| || |||||| ||| | |||| ||| |||||||| | TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACT CAACATTCTT CACTCTATTT 241 GATGCTGCAA AAAGTATAGG TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC 15543 |||||||||| ||| | | ||||||||| |||||||||| |||||| || |||||||||| GATGCTGCAA AAAATGCAAA AGATCCATCT GAAACCCCTT ATTGCAGACG AGGGTCACTC 301 ACTGACCCTG CAATAAAAGG AAAGATAGCC ATATGTCAGG CA---GGTGT CGTTTCAAAT 15486 |||||||||| | |||| ||| |||||||| ||||| | || || | || | ||| ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTTAG CATTCGGCGG TGTAGCCAAT 361 ATTGAAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 15426 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 421 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCA-- T-TGGTTGTT 15369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT TCTGGTTGTT 481 TCAGCTGCAG ATGGAAGCAA AATTCTTGAT TATACCAACT CAATATCGAA CCCTATTGCT 15309 |||||||||| |||||||||| ||||| || ||||| |||| |||||||||| |||| ||||| TCAGCTGCAG ATGGAAGCAA AATTCGTGCC TATACAAACT CAATATCGAA CCCTGTTGCT 541 ACAATCACAA TCCAA 15294 |||||||||| ||||| ACAATCACAA TCCAA 556 hqPGS_C08HBa0165B06.1-_SGN-E208913+ (15842 15294) ******************************************************************************** EST sequence 296 +strand 578 n (File: SGN-E244401+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 541 AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT Predicted gene structure (within gDNA segment 16542 to 14704): Exon 1 15942 15368 ( 575 n); cDNA 1 578 ( 578 n); score: 0.825 MATCH C08HBa0165B06.1- SGN-E244401+ 0.825 575 0.995 C PGS_C08HBa0165B06.1-_SGN-E244401+ (15942 15368) Alignment (genomic DNA sequence = upper lines): TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 15883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATGTCCCTT GGTGGAAGTC CAGTTCCTTT CTATGAAGAC AGTATTGCTT TCGGGGCCTA 15823 || ||| || |||||| || | |||| |||||| ||| ||||||| | ||||| || TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 TGCTGCAACA GAAAGAGGGA TTCTTGTGAG TTGCTCTGCT GGAAATAGTG GTCCATCCTA 15763 |||||| | |||||| || |||| || ||| ||||| || ||||| | | || | CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 CATCACAGCA TCAAACACAG CCCCTTGGAT TCTTACGGTA GGAGCCAGCA CTATTGATAG 15703 | ||| ||| ||| |||||||||| |||||| ||| || ||||||| | ||||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GCCACTGTTA CACTTGGAAA TACAGAGGAA TTTGAAGGGG AATCTGCTTA 15643 |||||||||| || ||||||| |||||||| | ||||||| || ||||| | |||||||||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT GATGCTGCAA AAAGTATAGG 15583 |||||||||| |||||| ||| | |||| ||| |||||||| | |||||||||| || | | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC ACTGACCCTG CAATAAAAGG 15523 |||||||| |||||||||| |||||||||| |||||||||| | | ||||| |||| ||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGCC ATATGTC-AG --GCAGGTGT CGTTTCAAAT ATTGAAAAAG GACAAGCTGT 15466 |||||||| |||||| || | |||| ||| || | | ||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA TCACAATATG GTGTCACTAA 15406 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 540 ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTT 15368 | |||||||| |||||||||| |||||||||| || | ||| AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT 578 hqPGS_C08HBa0165B06.1-_SGN-E244401+ (15942 15368) ******************************************************************************** EST sequence 305 +strand 560 n (File: SGN-E244422+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 541 AACAGCTGAT GCTCATGTTC Predicted gene structure (within gDNA segment 16542 to 14380): Exon 1 15942 15386 ( 557 n); cDNA 1 560 ( 560 n); score: 0.821 MATCH C08HBa0165B06.1- SGN-E244422+ 0.821 557 0.995 C PGS_C08HBa0165B06.1-_SGN-E244422+ (15942 15386) Alignment (genomic DNA sequence = upper lines): TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 15883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATGTCCCTT GGTGGAAGTC CAGTTCCTTT CTATGAAGAC AGTATTGCTT TCGGGGCCTA 15823 || ||| || |||||| || | |||| |||||| ||| ||||||| | ||||| || TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 TGCTGCAACA GAAAGAGGGA TTCTTGTGAG TTGCTCTGCT GGAAATAGTG GTCCATCCTA 15763 |||||| | |||||| || |||| || ||| ||||| || ||||| | | || | CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 CATCACAGCA TCAAACACAG CCCCTTGGAT TCTTACGGTA GGAGCCAGCA CTATTGATAG 15703 | ||| ||| ||| |||||||||| |||||| ||| || ||||||| | ||||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GCCACTGTTA CACTTGGAAA TACAGAGGAA TTTGAAGGGG AATCTGCTTA 15643 |||||||||| || ||||||| |||||||| | ||||||| || ||||| | |||||||||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT GATGCTGCAA AAAGTATAGG 15583 |||||||||| |||||| ||| | |||| ||| |||||||| | |||||||||| || | | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC ACTGACCCTG CAATAAAAGG 15523 |||||||| |||||||||| |||||||||| |||||||||| | | ||||| |||| ||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGCC ATATGTC-AG --GCAGGTGT CGTTTCAAAT ATTGAAAAAG GACAAGCTGT 15466 |||||||| |||||| || | |||| ||| || | | ||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA TCACAATATG GTGTCACTAA 15406 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| | |||||||| GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 540 ATCAGCTGAT GCTCATGTTC 15386 | |||||||| |||||||||| AACAGCTGAT GCTCATGTTC 560 hqPGS_C08HBa0165B06.1-_SGN-E244422+ (15942 15386) ******************************************************************************** EST sequence 394 +strand 435 n (File: SGN-E208810+) 1 AAGTATTGCT CTCGGGGCGT ACAGTGCAAC ACAAAGAGGC ATTCTTGTTA GTTGCTCAGC 61 AGGCAATAAT GGTCCTTCGC CTGCCTCACT AGATAACTCA GCCCCTTGGA TTCTTACAGT 121 AGGTGCCAGC ACGCTTGATA GAAAGATAAA AGCTACTGCT AAGCTCGGAA ATGGAGAGGA 181 ATTTGAAGGA CAATCTGCTT ATCGTCCAAA GATTTCCAAC TCAACATTCT TCACTCTATT 241 TGATGCTGCA AAAAATGCAA AAGATCCATC TGAAACCCCT TATTGCAGAC GAGGGTCACT 301 CACTGACCCT GCTATAATAG GAAAGATAGT ATTATGTTTA GCCATTCGGC GGTGTAGCCA 361 ATGTTGATAA AGGACAACCC TGTTAAGGAT GCTGCAGGTG TTGGGCATGA TTGTCATCAA 421 CCCATCACAA TATGG Predicted gene structure (within gDNA segment 17325 to 14805): Exon 1 15842 15415 ( 428 n); cDNA 2 435 ( 434 n); score: 0.801 MATCH C08HBa0165B06.1- SGN-E208810+ 0.801 428 0.984 C PGS_C08HBa0165B06.1-_SGN-E208810+ (15842 15415) Alignment (genomic DNA sequence = upper lines): AGTATTGCTT TCGGGGCCTA TGCTGCAACA GAAAGAGGGA TTCTTGTGAG TTGCTCTGCT 15783 ||||||||| ||||||| || ||||||| ||||||| | ||||||| || |||||| || AGTATTGCTC TCGGGGCGTA CAGTGCAACA CAAAGAGGCA TTCTTGTTAG TTGCTCAGCA 61 GGAAATAGTG GTCCATCCTA CATCACAGCA TCAAACACAG CCCCTTGGAT TCTTACGGTA 15723 || |||| || |||| || | || | ||| ||| |||||||||| |||||| ||| GGCAATAATG GTCCTTCGCC TGCCTCACTA GATAACTCAG CCCCTTGGAT TCTTACAGTA 121 GGAGCCAGCA CTATTGATAG AAAGATAAAA GCCACTGTTA CACTTGGAAA TACAGAGGAA 15663 || ||||||| | ||||||| |||||||||| || |||| || || ||||| | ||||||| GGTGCCAGCA CGCTTGATAG AAAGATAAAA GCTACTGCTA AGCTCGGAAA TGGAGAGGAA 181 TTTGAAGGGG AATCTGCTTA TCGTCCACAG ATTTCCGACT CTACATACTT CACTCTATAT 15603 |||||||| |||||||||| ||||||| || |||||| ||| | |||| ||| |||||||| | TTTGAAGGAC AATCTGCTTA TCGTCCAAAG ATTTCCAACT CAACATTCTT CACTCTATTT 241 GATGCTGCAA AAAGTATAGG TGATCCATCT GAAACCCCTT ATTGCAAACC AGGGTCACTC 15543 |||||||||| ||| | | ||||||||| |||||||||| |||||| || |||||||||| GATGCTGCAA AAAATGCAAA AGATCCATCT GAAACCCCTT ATTGCAGACG AGGGTCACTC 301 ACTGACCCTG CAATAAAAGG AAAGATAGCC ATATG-TCAG GCA---GGTG TCGTTTCAAA 15487 |||||||||| | |||| ||| |||||||| |||| | || || || | || | || ACTGACCCTG CTATAATAGG AAAGATAGTA TTATGTTTAG CCATTCGGCG GTGTAGCCAA 361 TATTGAAAAA GGACAA-GCT GTGAAGGATG CTGGAGGTGT T-GGCATGAT TGTCATCAAC 15429 | |||| ||| |||||| || || ||||||| ||| |||||| | |||||||| |||||||||| TGTTGATAAA GGACAACCCT GTTAAGGATG CTGCAGGTGT TGGGCATGAT TGTCATCAAC 421 CCATCACAAT ATGG 15415 |||||||||| |||| CCATCACAAT ATGG 435 hqPGS_C08HBa0165B06.1-_SGN-E208810+ (15842 15415) ******************************************************************************** EST sequence 255 +strand 465 n (File: SGN-E202140+) 1 TTTTGTGAAA GGTGCTAATG TATATGAAAA TGCTAATGGA ACTGCAGTTG GTGTTGCTCC 61 TCTTGCCCAT ATAGCCATAT ATAAGGTGTG TAACTCTGTT GGTTGTTCTG ACAGTGATAT 121 TTTAGCTGCC ATGGATTCAG CTATAGATGA TGGAGTAGAT ATTCTTTCTA TATCCATTGG 181 TGGATCTCTG AGACCTCTTT ATGATGAAAG TATTGCTCTC GGGGCGTACA GTGCAACACA 241 AAGAGGCATT CTTGTTAGTT GCTCAGCAGG CAATAATGGT CCTTCGCCTG CCTCAGTAGA 301 TAACTCAGCC CCTTGGATTC TTACAGTAGG TGCCAGCACG CTTGATAGAA AGATAAAAGC 361 TACTGCTAAG CTCGGAAATG GAGAGGAATT TGAAGGAGAA TCTGCTTATC GTCCAAAGAT 421 TTCCAACTCA ACATTCTTCA CTCTATTTGA TGCTGCAAAA AATGC Predicted gene structure (within gDNA segment 17280 to 12303): Exon 1 16049 15590 ( 460 n); cDNA 2 461 ( 460 n); score: 0.854 MATCH C08HBa0165B06.1- SGN-E202140+ 0.854 460 0.989 C PGS_C08HBa0165B06.1-_SGN-E202140+ (16049 15590) Alignment (genomic DNA sequence = upper lines): TTTGTGGAAG GTGCTAATGT ATATGGCAAT GCTAATGGCA CTGCTGTTGG TGTTGCCCCT 15990 |||||| ||| |||||||||| ||||| ||| |||||||| | |||| ||||| |||||| ||| TTTGTGAAAG GTGCTAATGT ATATGAAAAT GCTAATGGAA CTGCAGTTGG TGTTGCTCCT 61 CTTGCCCACA TAGCCATATA TAAGGTGTGT AATTCTAATA GTTGTTCTGA CAGTGATATT 15930 |||||||| | |||||||||| |||||||||| || ||| | |||||||||| |||||||||| CTTGCCCATA TAGCCATATA TAAGGTGTGT AACTCTGTTG GTTGTTCTGA CAGTGATATT 121 TTAGCTGCCA TGGATTCAGC TATAGATGAT GGAGTAGATA TTCTTTCAAT GTCCCTTGGT 15870 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||| ||||| TTAGCTGCCA TGGATTCAGC TATAGATGAT GGAGTAGATA TTCTTTCTAT ATCCATTGGT 181 GGAAGTCCAG TTCCTTTCTA TGAAGACAGT ATTGCTTTCG GGGCCTATGC TGCAACAGAA 15810 ||| || ||| | || ||| || ||| |||||| ||| |||| || ||||||| || GGATCTCTGA GACCTCTTTA TGATGAAAGT ATTGCTCTCG GGGCGTACAG TGCAACACAA 241 AGAGGGATTC TTGTGAGTTG CTCTGCTGGA AATAGTGGTC CATCCTACAT CACAGCATCA 15750 ||||| |||| |||| ||||| ||| || || |||| ||||| | || | ||| | AGAGGCATTC TTGTTAGTTG CTCAGCAGGC AATAATGGTC CTTCGCCTGC CTCAGTAGAT 301 AACACAGCCC CTTGGATTCT TACGGTAGGA GCCAGCACTA TTGATAGAAA GATAAAAGCC 15690 ||| |||||| |||||||||| ||| ||||| |||||||| |||||||||| ||||||||| AACTCAGCCC CTTGGATTCT TACAGTAGGT GCCAGCACGC TTGATAGAAA GATAAAAGCT 361 ACTGTTACAC TTGGAAATAC AGAGGAATTT GAAGGGGAAT CTGCTTATCG TCCACAGATT 15630 |||| || | | |||||| |||||||||| ||||| |||| |||||||||| |||| ||||| ACTGCTAAGC TCGGAAATGG AGAGGAATTT GAAGGAGAAT CTGCTTATCG TCCAAAGATT 421 TCCGACTCTA CATACTTCAC TCTATATGAT GCTGCAAAAA 15590 ||| |||| | ||| |||||| ||||| |||| |||||||||| TCCAACTCAA CATTCTTCAC TCTATTTGAT GCTGCAAAAA 461 hqPGS_C08HBa0165B06.1-_SGN-E202140+ (16049 15590) ******************************************************************************** EST sequence 75 -strand 624 n (File: SGN-E542827-) 1 CCAAAACCAG CAACCTAAAG TTCAAAATTC CAGGAAATTT CAATGTTTTC ATCCAATATA 61 TGGTAGAAAT TTCTAACAAT TTTATAACTT TTCGATGATT TGGTTCACTG CTAGTGTTTG 121 AACTTTGTAT TTGATTGAAG ATTTTGTGTT GTTTACAAAT ATCCTCTTTT AAGTTTATCT 181 ATTTTACGGA AAAAGTTTGA TATATTTCTC AATTTTGTCA TTTGCAGCAC TGTCGTTACA 241 AAATGGCTAA TATATATTAA AAAATTAATT TTAAATTTAT ATTTATTACT TTTGATTGTT 301 TTTAAAAAAA TTATTTAAAG GTATATATTA TTCTTCTATC AAAGTTCGAG GTTATATTTA 361 ATTTTTTTTA TACATAAATT ATTGTTTGAC TTCTTTTATT ATAATTATTT GAGTTTGTTA 421 TTCTAATTTT TTTTCTTTCA TTCCTTAGTT TAAAGAGAAA AAAAACTAAA CTATTTTTTT 481 TGTGTGTATT GTAATTTAAT TTGGTATTCA AAGAAAAATT TTGGTCATCT ACAATAAGTT 541 TTACAAGAAT ATTAGTGAAA TATAAATAAA TTTGATTATC AAAATAATAA TTATAAATTA 601 GTCATTAACC AAAAAAAAAG AAAA Predicted gene structure (within gDNA segment 27179 to 18023): Exon 1 26400 26369 ( 32 n); cDNA 157 187 ( 31 n); score: 0.562 Intron 1 26368 19312 (7057 n); Pd: 0.908 (s: 0), Pa: 0.918 (s: 0.81) Exon 2 19311 19270 ( 42 n); cDNA 188 228 ( 41 n); score: 0.810 Intron 2 19269 19184 ( 86 n); Pd: 0.000 (s: 0.81), Pa: 0.000 (s: 0.62) Exon 3 19183 18784 ( 400 n); cDNA 229 624 ( 396 n); score: 0.841 MATCH C08HBa0165B06.1- SGN-E542827- 0.841 474 0.760 C PGS_C08HBa0165B06.1-_SGN-E542827- (26400 26369,19311 19270,19183 18784) Alignment (genomic DNA sequence = upper lines): AAAAAACGAC TTTTTGAGAT AATAAACATA AGGTGAGTGA CCATGTGAGA ATTTTTGTTA 26341 ||| | | | |||| || | || | | | AAATATCCTC TTTTA-AGTT TATCTATTTT AC........ .......... .......... 187 TTACTCGAAT CTGAGAAATT TGTTGTTAGT TACCTAATAA TGTAGCCTTT AATCATGACT 26281 .......... .......... .......... .......... .......... .......... 187 CCGAATCTTG ATTGTGACAT ACTTACTTCT ATTTTTCTTA TATGAATAAC TTGATTAAAA 26221 .......... .......... .......... .......... .......... .......... 187 TGTAATTATC TTCGAGAATA AAAAGTTTGT TATGTTTAAT ACCTTTAGTT TGACCGGTAT 26161 .......... .......... .......... .......... .......... .......... 187 CGATCTTAAT TGTAGTTTCT TTTCATTAGC AAATTGCCTA ACGCTCTTTT TTTTTTTTTT 26101 .......... .......... .......... .......... .......... .......... 187 TTTTTTGTGA ACAATGTATC TTATTGTTGT GATATTATTA ACCATGTGAT TTATTTGAAG 26041 .......... .......... .......... .......... .......... .......... 187 TGTTTTATTG ATCCCTGGTA AAGATTAGTT GTTTTATTTT ATTTATTATA ATAAAGTTTC 25981 .......... .......... .......... .......... .......... .......... 187 TAATTGATTA AGTTATTATG TTTATATGTG ACTCCTTTGT TTAGTAAATG ATTTTGTGTA 25921 .......... .......... .......... .......... .......... .......... 187 TGAAGTTATT TAATTCATAC ACAGAATATT AAAATTGTCG GTTCTTGTAA GTTACTATCA 25861 .......... .......... .......... .......... .......... .......... 187 TTGTTCACAA TCAAAGATGA GGTAGGACAG AATATTGATG CTTGTATCAC AAGATTAAAA 25801 .......... .......... .......... .......... .......... .......... 187 ATAATTCGAT CTTAATTATG AGTAATTCTA ACTTCTTGTA TTAGTACATT TTTTTATGTA 25741 .......... .......... .......... .......... .......... .......... 187 TTAAATGAAC CAAATAGTGA TATTATTTTT TATTCTAATA TTAATAAACA ATATCTTTAG 25681 .......... .......... .......... .......... .......... .......... 187 TCCATTACAT GAACTGATAT TCTTAATTTA ATATAATTAT TATGATCTAT GTAGTTTAAT 25621 .......... .......... .......... .......... .......... .......... 187 TTATTATTTT AATCTATTAA AATGTGAGAC TCTATTACGA GTCAATATAT TTTTAATAGA 25561 .......... .......... .......... .......... .......... .......... 187 TTGAATAATG AAAAATCACA TAAATAAATA ATAATTGATT AATATAACCA TGTCTCAAAT 25501 .......... .......... .......... .......... .......... .......... 187 TTGAGATAGA AGATACCCCA TTATAATTAC TTATAAGTTT TTCATATCAG ACCCAGGATT 25441 .......... .......... .......... .......... .......... .......... 187 CGATTTTCAT GTGAGACCCA GGATTCGAGA TAAGAGATAA GTTAAGTATA AAATAGAGGG 25381 .......... .......... .......... .......... .......... .......... 187 TTAAACTAGT TAGTTAATTA AAATTTTTTC TGAAGTTTAT TTTAATTGAT TAGTATCGAT 25321 .......... .......... .......... .......... .......... .......... 187 AAATTTAATG TGGAAAATTA AATAAATTGT AGTAGTAAAT TTCGAAATTA AATTGCGAAG 25261 .......... .......... .......... .......... .......... .......... 187 TATAATTACA AATTTTATTG GTACAAACTG CAATATGTAA TTTTATTAAA ATATGGTTAA 25201 .......... .......... .......... .......... .......... .......... 187 TTCATGTTTT TATGAACTAA TATTATAATG GAAATTTACG ATACTAAAAT TGTGATTTAT 25141 .......... .......... .......... .......... .......... .......... 187 GTTGTATTTG ACTAATTGAT AAGTTCAACA ACCATTATGG AACAAGTATT TCTTTTATTT 25081 .......... .......... .......... .......... .......... .......... 187 TTGTCATGAA TGAATTAATA ACTTTATTTT GTTCAGTGCC GAGTTAACTG ACACAGAAGA 25021 .......... .......... .......... .......... .......... .......... 187 TTAATGACAG AATCATTTTT TCTTTTCCGA CCTTTTAATT TTTGCCTTGT TCATTCGAAT 24961 .......... .......... .......... .......... .......... .......... 187 GAAAATCCAC GAAAAATTAT AAATTTTCTA AAAACATTTT TACCAAATCA ACTAGGGAAA 24901 .......... .......... .......... .......... .......... .......... 187 CAAAAAAATG GAGTATGGAG CCTAAAGGGT ACAAAATATT AATAAAAATT TCAAAATGGT 24841 .......... .......... .......... .......... .......... .......... 187 ATATAAAATT TTATATTAAC CAAAACAGTA AAATCGCTGT ATCAACAGCT ATTTACTTCC 24781 .......... .......... .......... .......... .......... .......... 187 CCGGAAAAAG CAAAATCGCT GCTTTTTTTT TTAAAAAAAA ATGAAATCGC TACCTAGGCA 24721 .......... .......... .......... .......... .......... .......... 187 GCGATTTTTA AAAAAAGATT TTTTTTTTAA ATGGGGAAGT CGCTGCCTGG GCAGCGACTT 24661 .......... .......... .......... .......... .......... .......... 187 TTATAAAAAA AAATATTTTG AAATGTGCAA GTCGCTGCCC AGGCAGAGAC TTGTATAATT 24601 .......... .......... .......... .......... .......... .......... 187 TTTTTTAAAA AAATTTTAAT TTTTTTTCTT AAAATAAATG TGGAATTTTT TTTAAAAAAA 24541 .......... .......... .......... .......... .......... .......... 187 AATTCTTTTT AAAGCAGCAA TTTTATAAGA TAAAAAAAAA GTTATAATAT CTTTTTTTAT 24481 .......... .......... .......... .......... .......... .......... 187 AAAATTGCTA CTTTAAATTT TATTTTTTTA AAATAATTAT TTATGGAAAA TCGCAGCGAT 24421 .......... .......... .......... .......... .......... .......... 187 TTTCATATTT TAAAAAAAAA TTATAAATTC GCTAACTGAT TTACATATTT TTTAAAAAAA 24361 .......... .......... .......... .......... .......... .......... 187 ATTATAAATC GCTGCGTAGG CAGCGATTTA AAAAATTTAT AATTTTTTTT AAAATATGAA 24301 .......... .......... .......... .......... .......... .......... 187 AATCGCTGTG ATTTTCCAAA AATATTACCC AATTTATAAA TTTATAAATT TTTTAAATCG 24241 .......... .......... .......... .......... .......... .......... 187 CTGCGATTTT CCACAAATAT TTTTTTTAAA AAAATAAAAT TTAAAGTAAA ATTATAAAAT 24181 .......... .......... .......... .......... .......... .......... 187 TATTGCTTTA AAAAGTCTTT TTTTTTAATT TCCACATTGT TTCCACATTT TTTTAAAGAA 24121 .......... .......... .......... .......... .......... .......... 187 AAAAAATTAA AAATTTCAAA AAAAATAAAA AATTATACAA GTCGCTGCCC AGGCAGCGAC 24061 .......... .......... .......... .......... .......... .......... 187 TTTGCACATT TCAAAAAAAA AAAATTTTAT AGACTTCCTC ATTTAAAAAA AATTCTTTTT 24001 .......... .......... .......... .......... .......... .......... 187 TTTTAAAATC GCTGCCTAGG CAGCGACTTT TTTTTAAAAT AAATTAAAAT CGCTGCCTAG 23941 .......... .......... .......... .......... .......... .......... 187 GTAGCGATTT CATTTTTTTA AAAAAAAAAT TCACATTTTG CAAAATCGCT GCCTCGGCAG 23881 .......... .......... .......... .......... .......... .......... 187 TGATTTTGCT TTTTCGGGGA TGTAAATCGT TGTTGATGCA GCGATTTTGC CGTTTTGGTT 23821 .......... .......... .......... .......... .......... .......... 187 AATATAAAAT TTTATATACC GTTTTGAAAT TTTTGTTAAT ATTTTGTACC CTAAAGGGTC 23761 .......... .......... .......... .......... .......... .......... 187 CGTACTCCAA AAAAAATGTA GCATTAAATG GTATTATATT TAGTTATAAT GTGAATTCAT 23701 .......... .......... .......... .......... .......... .......... 187 GATATTGAAT AATATTTTTT CTCTTCAAAT TCTAACCCTT ATACTAGTCA TACGTCTATT 23641 .......... .......... .......... .......... .......... .......... 187 CTCTTAATTG CTACAAGTAA TATAACGAGA TAGGATTCTT TTTTCGAGTT GCAAGTGGTG 23581 .......... .......... .......... .......... .......... .......... 187 AACTTTTTGG AACAAAATGA GAAATTACGA AAAACAATGT TCACTATTTA AATTTTATGG 23521 .......... .......... .......... .......... .......... .......... 187 TCACATTTTG GCAGAACATA CATATTTAGT TTAAAGAGAA AAATCAAATA ATTTGCATGC 23461 .......... .......... .......... .......... .......... .......... 187 CTGATTCAAT TCGGTGGCAA CACCATAATT TTAGTGAAAT AACAATTAAA CTACTAAAAA 23401 .......... .......... .......... .......... .......... .......... 187 TATTAAAGAA TGTAATACAT AACTCACAAT GTCATGGAAC ATTTCCAAAG TCAAGAAAAT 23341 .......... .......... .......... .......... .......... .......... 187 ATTAAAAAAT ATTATCTGTA TTTTTAGTAT CTAAATTAAT ATAGTCCATA ATGTTTTAAA 23281 .......... .......... .......... .......... .......... .......... 187 GTATAGATAT GTAGCTATTG AAAAATGATT AATTAAGCTA TAATAATTTT AAAAAAATAA 23221 .......... .......... .......... .......... .......... .......... 187 TTTGGACGTG TCTAAATCTT GATCATCCTA TCTTAAAGGG GCCAGGTGTA ACGTCTCTTT 23161 .......... .......... .......... .......... .......... .......... 187 CTCATGCTTA ATAAATTTAT AGTTTACTCT TAAATAATTT ATTTATTTAT TTTTGTAAGA 23101 .......... .......... .......... .......... .......... .......... 187 AAAACATATT ATCCTATTGA AGATGAAGTT ATGACTTTTG GAGAATATAA GTAATGTACA 23041 .......... .......... .......... .......... .......... .......... 187 CTAGATATAT GATACAATTA CCCAAACACA GAATCTAAAA TTTTAACTTA ATGAGTTTTA 22981 .......... .......... .......... .......... .......... .......... 187 TTTTTAAAGT TCTTAACATT GAGTTCACTA CAATTTTAAA ATTATGGTTG ATTTTGTCAA 22921 .......... .......... .......... .......... .......... .......... 187 ATTATTGGAA AAGATCAAAA CTTATACATA AAACTAATTA GAAGTTATTA TATTTTATTA 22861 .......... .......... .......... .......... .......... .......... 187 TAGAAGTAGT TAACATCAGC CTGTTGGGAT TTTTAAATTT TGTTGAAATT CCCTATCACT 22801 .......... .......... .......... .......... .......... .......... 187 ATCTCAGCGT TAGTTAAGAG GGATGCAATA GGGGAATGTT AAATGTACAT GTATTATACA 22741 .......... .......... .......... .......... .......... .......... 187 ATTTTGGGGG AAAAGCTAAT AACATTATTT CAAGTCATAT TGTACTTTTA TTAACTTTTA 22681 .......... .......... .......... .......... .......... .......... 187 TTAGTATTAT TATTATAGTT CTGGTGTCTA GATTAATTTA TCGTACCTCA ACTAATTTCA 22621 .......... .......... .......... .......... .......... .......... 187 CATCATACTA GGTCAAAATT CTATTGTGGC ATCCGAAAGT ATTAGAAGGT AGCATGTGGC 22561 .......... .......... .......... .......... .......... .......... 187 GATTGAGGCT AGTCAACTCC AGCTCAACAA TGCTCAGTTT GACTAAGTGC TCACTCAAAA 22501 .......... .......... .......... .......... .......... .......... 187 GGCAAAAGTT ATGGCAGAGA TTGTGGGTTA TCCTAGGGTT CCAAGCTCTC AAGTGATTTT 22441 .......... .......... .......... .......... .......... .......... 187 TTTGGATATA TTTCTAGACT TTTTTAGGTC CCCGCAAGGA TGACCTAACG ATCGAGCCAT 22381 .......... .......... .......... .......... .......... .......... 187 CACACATTGG AGTAACCTTC TAGAGATATC AGGTTAAAAA CTCAGCTACT ATACACTAGG 22321 .......... .......... .......... .......... .......... .......... 187 TGTGTGAGTC CGTTAGCTCT AACATATATG AACACCTTGG CAAAAATCAC GTCCATTAAG 22261 .......... .......... .......... .......... .......... .......... 187 AAATCAACAA ACATAATGTG TAGTTTACTA AACTACCCTT GTTATATACT TCTCTTAAAA 22201 .......... .......... .......... .......... .......... .......... 187 ATTGAACACT ATTAATATAA GGGTCTGGTT GAAAAACATA CTAATTTTCG TCTTGAATTT 22141 .......... .......... .......... .......... .......... .......... 187 TTAACGTCAC ACTTATTTTG GGACGGAGTG AGTACTTGTG AGATGAACAA GACACCTCAT 22081 .......... .......... .......... .......... .......... .......... 187 GTATTAGTTA AGTCATGCTC AAGTTGGCTT GAACACTACT TAAAAAGTAT ATTGTAGATT 22021 .......... .......... .......... .......... .......... .......... 187 AATGACTTCA TCTATATGAT GTTGCTATGC CAACTTCATT AAAAAAATAG AAGTTAAGTA 21961 .......... .......... .......... .......... .......... .......... 187 TAATAAAATC GTTTTAGCGT ATAGAATGAC CAATTCACAT TCTATTTTCT ATTTAATCCA 21901 .......... .......... .......... .......... .......... .......... 187 AGAATGACTA TTTCACATTT CTAAAACTAC CTTCTGACTT GCAAATAAAA AAATAAACTT 21841 .......... .......... .......... .......... .......... .......... 187 CCAATTTGTA TATATAGCCT CAATGAAAAT TCAAAAAACA CACACCACCA AATAACATCT 21781 .......... .......... .......... .......... .......... .......... 187 CTTTCTTTAG TAGTAAAATT ATGATGGCTC AATACAGTTC AGTTCTTACT ATAATTGGGC 21721 .......... .......... .......... .......... .......... .......... 187 TGATTTGTGT GCTCTTTTCA TTTACTACTC ATGCAGCTGA ACAGAACAAT TCACAAATCT 21661 .......... .......... .......... .......... .......... .......... 187 ATATTGTTCA TTGTGAGTTC CCTTCTGGGG AAAGGACTGC AGAATACCAA GATTTAGAAA 21601 .......... .......... .......... .......... .......... .......... 187 GCTGGTATCT TTCTTTCTTG CCTACAACAA CCTCCGTTAG TTCTCGTGAG GCACCACGTT 21541 .......... .......... .......... .......... .......... .......... 187 TGATATATTC CTATCGAAAT GTCTTAACAG GCTTTGCAGC TAAGTTATCA GAAGAAGATA 21481 .......... .......... .......... .......... .......... .......... 187 TAAAGGAAAT GGAAAAAAAG GAAGGATTTG TTTCTGCACG CCCCCAGCAG TTTGTTAGTT 21421 .......... .......... .......... .......... .......... .......... 187 TACACACCAC ACATAGTGTC AATTTCTTGG GATTGCAACA GAACATGGGG TTCTGGAAAG 21361 .......... .......... .......... .......... .......... .......... 187 ACTCTAATTA TGGGAAAGGT GTGATCATCG GAGTTCTAGA CACTGGAATT CTTCCTGACC 21301 .......... .......... .......... .......... .......... .......... 187 ATCCTTCATT TAGTGACGTT GGGATGCCTA CCCCACCTGC TAAGTGGAAA GGAGTTTGTG 21241 .......... .......... .......... .......... .......... .......... 187 AGTCAAATTT TATGAACAAG TGTAACAAAA AGCTCATTGG AGCGAGGTCT TACCAACTTG 21181 .......... .......... .......... .......... .......... .......... 187 GCAATGGTTC CCCGATAGAT GGTAATGGAC ACGGTACACA CACAGCAAGC ACAGCTGCAG 21121 .......... .......... .......... .......... .......... .......... 187 GAGCCTTTGT GAAAGGTGCT AATGTATATG GCAATGCTAA TGGAACTGCA GTTGGTGTTG 21061 .......... .......... .......... .......... .......... .......... 187 CACCTCTTGC CCATATAGCC ATATATAAGG TATGTGGTTC CGATGGCAAG TGTTCTGACA 21001 .......... .......... .......... .......... .......... .......... 187 GCGATATTTT AGCTGCCATG GATTCAGCTA TAGATGATGG AGTAGATATT ATTTCAATGT 20941 .......... .......... .......... .......... .......... .......... 187 CCCTTGGTGG AGGTCCAGTC CCTTTCCATA GTGACAATAT TGCTCTCGGG GCATACAGTG 20881 .......... .......... .......... .......... .......... .......... 187 CAACAGAAAG AGGGATTCTT GTAAGTGCCT CTGCTGGAAA TAGTGGTCCA TCCCTTATCA 20821 .......... .......... .......... .......... .......... .......... 187 CAGCAGGGAA CACCGCCCCT TGGATTCTTA CGGTAGGCGC CAGCACTACT GATAGAAAGA 20761 .......... .......... .......... .......... .......... .......... 187 TAAAAGTTAC TGTTACACTT GGAAATACAG AGGAATTTGA AGGGGAAGCT TCTTATCGTC 20701 .......... .......... .......... .......... .......... .......... 187 CACAGATTTC CGACTCAAAA TTCTTCACTC TGTATGATGC TTCAAAAGGT AAAGGTGATC 20641 .......... .......... .......... .......... .......... .......... 187 CATCTAAAAC CCCTTACTGC AAACCAGGGT CACTCACTGA CCCTGCAATA AAAGGAAAGA 20581 .......... .......... .......... .......... .......... .......... 187 TAGTCATATG TTATCCAGGT GTCGTTTCTA AGGTTGTAAA AGGACAAGCT GTGAAGGATG 20521 .......... .......... .......... .......... .......... .......... 187 CTGGAGGTGT TGGTATGATT GCCATCAACC TGCCAGAAGA TGGTGTCACA AAATCAGCTG 20461 .......... .......... .......... .......... .......... .......... 187 ATGCTCATGT TCTTCCAGCT TTGGAGGTTT CAGCTGCAGA TGGAATCAGA ATTCTTACTT 20401 .......... .......... .......... .......... .......... .......... 187 ATACAAACTC AATATCAAAC CCTACAGCTA AAATCACATT CCAAGGAACA ATAATTGGAG 20341 .......... .......... .......... .......... .......... .......... 187 ATGAAAACGC TCCCATAGTT GCTTCATTTT CTTCTCGCGG ACCAAATAAA CCTAGTCCTG 20281 .......... .......... .......... .......... .......... .......... 187 GCATCTTGAA ACCTGACATA ATCGGTCCTG GTGTTAATAT CCTTGCTGCT TGGCCTACCT 20221 .......... .......... .......... .......... .......... .......... 187 CCGTGGATGA CAACAAAAAA ACCAAATCCA CATTCAATAT TATATCAGGC ACCTCGATGT 20161 .......... .......... .......... .......... .......... .......... 187 CTTGCCCTCA CCTTAGTGGC GTAGCAGCTC TGCTGAAGAG CACACATCCT GATTGGTCTC 20101 .......... .......... .......... .......... .......... .......... 187 CTGCTGCTAT TAAGTCTGCA ATCATGACAA CCGCTTACAC TTTAAACCTT GCCAGTAGTC 20041 .......... .......... .......... .......... .......... .......... 187 CAATACTAGA TGAAAGGTTA CTTCCTGCAG ACATCTTTGC AATTGGTGCA GGACACGTTA 19981 .......... .......... .......... .......... .......... .......... 187 ATCCATCAAG TGCAAATGAT CCAGGACTAG TTTATGATAC CCCCTCCGAG GACTATTTCC 19921 .......... .......... .......... .......... .......... .......... 187 CGTATTTATG TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG 19861 .......... .......... .......... .......... .......... .......... 187 TAAATTGCTT AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA 19801 .......... .......... .......... .......... .......... .......... 187 TATTTGGACT TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG 19741 .......... .......... .......... .......... .......... .......... 187 TTGCATCATC TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC 19681 .......... .......... .......... .......... .......... .......... 187 CCACAGAACT AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA 19621 .......... .......... .......... .......... .......... .......... 187 AGACAACCAG CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA 19561 .......... .......... .......... .......... .......... .......... 187 GGCACTCTGT GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT 19501 .......... .......... .......... .......... .......... .......... 187 ATAAGTGCAT AAAGTACTCG AACATTTGAT TGTTTTACTG TATACTCTAT GTTACTTTTT 19441 .......... .......... .......... .......... .......... .......... 187 CATTATTAAA CAAAGTGTTT CACTGTTTGT TCACAGCTGA TTGAAGAACA TAAAAGCATA 19381 .......... .......... .......... .......... .......... .......... 187 TCCTCTTTGA TAGAAGTCAT ATTTTCATTG ATCGTTTCTT TTACTTTTTA TATGTTCCAT 19321 .......... .......... .......... .......... .......... .......... 187 TTTTTTAAGG GAAAAGGGTC CGATATACCC CTCAATTTTG TCATTTGGAG CTGATATAAC 19261 | ||||| || |||||| |||||||||| ||||||| || | .........G GAAAA-AGTT TGATATATTT CTCAATTTTG TCATTTGCAG C......... 228 TCTCGTTATA AAAGTGGCTC ATATATGCCC TTACCGTTAT ACAAACGGCT CACATATACC 19201 .......... .......... .......... .......... .......... .......... 228 CCTGCCGTTA CAAAATGGCT CACATATACC CTTCATTTAA CGGAAGTTAA AAAATTAGTT 19141 || | | ||| ||| | |||| ||||||| || .......... .......ACT GTCGT-TACA AAATGGCTAA TATATATTAA AAAATTAATT 270 TTAAATTTAT ATTTATTACT TCTAATT-TT AAAAAAAAAA TTATTTAGGG GTATATATGA 19082 |||||||||| |||||||||| | | ||| || ||||||| ||||||| | |||||||| | TTAAATTTAT ATTTATTACT TTTGATTGTT TTTAAAAAAA TTATTTAAAG GTATATATTA 330 TTCTTTTATC AAAGTTCAAG G-TATATTTT AATTTTTTTG ATACATAAAT TATTTTTTGA 19023 ||||| |||| ||||||| || | |||| ||| ||||||||| |||||||||| |||| ||||| TTCTTCTATC AAAGTTCGAG GTTATA-TTT AATTTTTTTT ATACATAAAT TATTGTTTGA 389 CTTCTTTTAT TATAATTATT TGAATTTCTT ATTCTTATTT TGTTTTTTTC TTTCATTCCT 18963 |||||||||| |||||||||| ||| ||| || |||| || | |||||||| |||||||||| CTTCTTTTAT TATAATTATT TGAGTTTGTT ATTC-TA--A T-TTTTTTTC TTTCATTCCT 445 TAGTTTAAAG AATAAAAAAA TTAAACTA-T ATTTTTGTGT GTATTGTAAT TTACTCTCGT 18904 |||||||||| | ||||||| ||||||| | ||||||||| |||||||||| ||| | | || TAGTTTAAAG AGAAAAAAAA CTAAACTATT TTTTTTGTGT GTATTGTAAT TTAATTTGGT 505 ATTCGAAGAA AAAATTTGAT CATGTACAAT AAGTTTTACA AGAATATTAG TGAAACATAA 18844 |||| ||||| ||| |||| | ||| |||||| |||||||||| |||||||||| ||||| |||| ATTCAAAGAA AAATTTTGGT CATCTACAAT AAGTTTTACA AGAATATTAG TGAAATATAA 565 ATAAATCTGA TTATCAAAAT AATAATTATA AATTAGTCAT TGAAACAAAA AAAAAGTCAA 18784 |||||| ||| |||||||||| |||||||||| |||||||||| | || ||||| |||||| || ATAAATTTGA TTATCAAAAT AATAATTATA AATTAGTCAT T-AACCAAAA AAAAAGAAAA 624 hqPGS_C08HBa0165B06.1-_SGN-E542827- (19311 19270,19183 18784) ******************************************************************************** EST sequence 64 -strand 460 n (File: SGN-E243215-) 1 GTATGAAATT TTAAAAAATA GGGAAAAGGG TCTGATATAC CTCTCAACTT TGTCATTTAG 61 AGCTGATATA TCCCTCGTAA TAAAAGTGGT TCATATATGC CCTTATCGTT ATACAAACGG 121 CTCACATATA CCCCTGCCGT TAGAAAATGG CTCACATATA CCCTTCATTT AACGAAAGTT 181 AAAAAATTAG TTTTAAATTT ATATTTGTTA CTTCTAATTT TTTTTTAAAA AAAATATTTA 241 GGGATATATA TGATTCTTCT ATCAAAGTTC AAGGTATATT TTAATTTTTT CATACAAAAA 301 TTATTTTTTG ACTTCTTTTA TTATAATAAT TTGAGTTTCT TATTCTTATT TTGTTTTTTT 361 CTTTCATTCC TTAGTTTAAA TAAAAAAAAT TCAAATATTT TTTTTGTGTG TATTGTAATT 421 TAATTTCGTA TTCGAAGAAA AAATTGGTCA TCTACAATAA Predicted gene structure (within gDNA segment 20896 to 18138): Exon 1 19311 18872 ( 440 n); cDNA 22 460 ( 439 n); score: 0.907 MATCH C08HBa0165B06.1- SGN-E243215- 0.907 440 0.957 C PGS_C08HBa0165B06.1-_SGN-E243215- (19311 18872) Alignment (genomic DNA sequence = upper lines): GGAAAAGGGT CCGATATACC CCTCAATTTT GTCATTTGGA GCTGATATAA CTCTCGTTAT 19252 |||||||||| | |||||||| ||||| ||| ||||||| || ||||||||| | ||||| || GGAAAAGGGT CTGATATACC TCTCAACTTT GTCATTTAGA GCTGATATAT CCCTCGTAAT 81 AAAAGTGGCT CATATATGCC CTTACCGTTA TACAAACGGC TCACATATAC CCCTGCCGTT 19192 |||||||| | |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| AAAAGTGGTT CATATATGCC CTTATCGTTA TACAAACGGC TCACATATAC CCCTGCCGTT 141 ACAAAATGGC TCACATATAC CCTTCATTTA ACGGAAGTTA AAAAATTAGT TTTAAATTTA 19132 | |||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AGAAAATGGC TCACATATAC CCTTCATTTA ACGAAAGTTA AAAAATTAGT TTTAAATTTA 201 TATTTATTAC TTCTAA--TT TTAAAAAAAA AATTATTTAG GGGTATATAT GATTCTTTTA 19074 ||||| |||| |||||| || || ||||| || ||||||| || ||||||| ||||||| || TATTTGTTAC TTCTAATTTT TTTTTAAAAA AAATATTTAG GGATATATAT GATTCTTCTA 261 TCAAAGTTCA AGGTATATTT TAATTTTTTT GATACATAAA TTATTTTTTG ACTTCTTTTA 19014 |||||||||| |||||||||| ||| |||||| ||||| ||| |||||||||| |||||||||| TCAAAGTTCA AGGTATATTT TAA-TTTTTT CATACAAAAA TTATTTTTTG ACTTCTTTTA 320 TTATAATTAT TTGAATTTCT TATTCTTATT TTGTTTTTTT CTTTCATTCC TTAGTTTAAA 18954 ||||||| || |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATAATAAT TTGAGTTTCT TATTCTTATT TTGTTTTTTT CTTTCATTCC TTAGTTTAAA 380 GAATAAAAAA ATTAAACTAT ATTTTTGTGT GTATTGTAAT TTACTCTCGT ATTCGAAGAA 18894 || |||||| | ||| | ||||||||| |||||||||| ||| | |||| |||||||||| TAA-AAAAAA TTCAAATATT TTTTTTGTGT GTATTGTAAT TTAATTTCGT ATTCGAAGAA 439 AAAATTTGAT CATGTACAAT AA 18872 |||| ||| | ||| |||||| || AAAA-TTGGT CATCTACAAT AA 460 hqPGS_C08HBa0165B06.1-_SGN-E243215- (19311 18872) ******************************************************************************** EST sequence 141 +strand 701 n (File: SGN-E578389+) 1 GAAAAACATA TATCTTATTG CTATACACTT ATAATTATGC AATATACATA CATTTTAATT 61 CGGTTCAATT ATATGCAAAG CAAATTTTAT AATAATATTG CAGCGAAATA GGCAGCGAAT 121 TATACAATTG TAGTTAAATA GGATAGCGAA TTATACAATT GCAGCGAAAT AGGCCAGCGA 181 ATTATACAAT TTAGGTCAGC GAATTATACA ATTTTATGTT TGCTATGGAG CGCAATTATG 241 CAAACTTTGT TATAGCATAC AAATATGAAT TTTTTGTTTG TTATATGTGA AAGTTGCCCA 301 TTAATTAAAG AGTCAATAAA ATAGCGGTCT AATCAAGTCC TAAGCAGCCC AAGGTTTGAC 361 CCGTCAACCC AAAAATGAAT AATATTATGG GAAAAGGGTA TGATATACCC CTCAACTTTG 421 TCATTTGAAA CTGATATACC CCTCGTTATG AAAGTGGCTC ATATATACCC TTACCGTTAT 481 ACAAATGGTT CACATATACC TCTGCCGTTA CAAAATGAGC TCATATATAC CCTTCATTTA 541 ACGAAAGTGA AAAAATTACT TTTAAATTTA TAATTTTACT TTAATTTTAA AAAAAAATAT 601 ATTTAGGGGC ATATATGATT CTTTTTTCAA AGTTCAAGGT ATATTTCAAA TTTTTTTAAT 661 ACATAAATTA TTTTTTTGAC TTATTTATTA TAATTATTTG A Predicted gene structure (within gDNA segment 24350 to 18390): Exon 1 19989 19977 ( 13 n); cDNA 358 370 ( 13 n); score: 0.769 Intron 1 19976 19405 ( 572 n); Pd: 0.000 (s: 0), Pa: 0.944 (s: 0) Exon 2 19404 19386 ( 19 n); cDNA 371 389 ( 19 n); score: 0.526 Intron 2 19385 19312 ( 74 n); Pd: 0.247 (s: 0), Pa: 0.918 (s: 0.88) Exon 3 19311 19000 ( 312 n); cDNA 390 701 ( 312 n); score: 0.889 MATCH C08HBa0165B06.1- SGN-E578389+ 0.889 344 0.491 C PGS_C08HBa0165B06.1-_SGN-E578389+ (19989 19977,19404 19386,19311 19000) Alignment (genomic DNA sequence = upper lines): GACACGTTAA TCCATCAAGT GCAAATGATC CAGGACTAGT TTATGATACC CCCTCCGAGG 19930 ||| ||| || || GACCCGTCAA CCC....... .......... .......... .......... .......... 370 ACTATTTCCC GTATTTATGT GGTTTGAGGT ACACAAATGC ACAGGTAAGT AAACTGTTAC 19870 .......... .......... .......... .......... .......... .......... 370 AACGCAAGGT AAATTGCTTA GAAGTAAAGA GTATCCCTGA AGCAGAATTA AACTATCCTT 19810 .......... .......... .......... .......... .......... .......... 370 CGTTTTCCAT ATTTGGACTT GGATCAACTC CTCAGACATA CACAAGAACT GTGACCAACG 19750 .......... .......... .......... .......... .......... .......... 370 TTGGTGATGT TGCATCATCT TACAAAGTGG AGATAGCTTC ACCTATAGGA GTTGCCATAG 19690 .......... .......... .......... .......... .......... .......... 370 AAGTTGTACC CACAGAACTA AATTTCTCCA AGTTGAACCA GAAGTTAACA TACCAAGTGA 19630 .......... .......... .......... .......... .......... .......... 370 CATTTTCCAA GACAACCAGC AGTTCAGAAG TTGTGGTTGT TGAGGGATTC TTGAAGTGGA 19570 .......... .......... .......... .......... .......... .......... 370 CTTCTACTAG GCACTCTGTG AGAAGTCCAA TTGCAGTTGT ATTGGTCTAG TGAAAAATTG 19510 .......... .......... .......... .......... .......... .......... 370 GCTATATATA TAAGTGCATA AAGTACTCGA ACATTTGATT GTTTTACTGT ATACTCTATG 19450 .......... .......... .......... .......... .......... .......... 370 TTACTTTTTC ATTATTAAAC AAAGTGTTTC ACTGTTTGTT CACAGCTGAT TGAAGAACAT 19390 | |||| || || .......... .......... .......... .......... .....AAAAA TGAATAATAT 385 AAAAGCATAT CCTCTTTGAT AGAAGTCATA TTTTCATTGA TCGTTTCTTT TACTTTTTAT 19330 | TATG...... .......... .......... .......... .......... .......... 389 ATGTTCCATT TTTTTAAGGG AAAAGGGTCC GATATACCCC TCAATTTTGT CATTTGGAGC 19270 || |||||||| |||||||||| |||| ||||| |||||| | | .......... ........GG AAAAGGGTAT GATATACCCC TCAACTTTGT CATTTGAAAC 431 TGATATAACT CTCGTTATAA AAGTGGCTCA TATATGCCCT TACCGTTATA CAAACGGCTC 19210 ||||||| | |||||||| | |||||||||| ||||| |||| |||||||||| |||| || || TGATATACCC CTCGTTATGA AAGTGGCTCA TATATACCCT TACCGTTATA CAAATGGTTC 491 ACATATACCC CTGCCGTTAC AAAATG-GCT CACATATACC CTTCATTTAA CGGAAGTTAA 19151 ||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| || |||| || ACATATACCT CTGCCGTTAC AAAATGAGCT CATATATACC CTTCATTTAA CGAAAGTGAA 551 AAAATTAGTT TTAAATTTAT ATTTATTACT TCTAATTTTA AAAAAAAAAT TATTTAGGGG 19091 ||||||| || |||||||||| | || ||||| | |||||||| |||||||| |||||||||| AAAATTACTT TTAAATTTAT AATT-TTACT T-TAATTTTA AAAAAAAATA TATTTAGGGG 609 TATATATGAT TCTTTTATCA AAGTTCAAGG TATATTT-TA ATTTTTTTGA TACATAAATT 19032 ||||||||| |||||| ||| |||||||||| ||||||| | |||||||| | |||||||||| CATATATGAT TCTTTTTTCA AAGTTCAAGG TATATTTCAA ATTTTTTTAA TACATAAATT 669 A-TTTTTTGA CTTCTTTTAT TATAATTATT TGA 19000 | |||||||| ||| ||||| |||||||||| ||| ATTTTTTTGA CTT-ATTTAT TATAATTATT TGA 701 hqPGS_C08HBa0165B06.1-_SGN-E578389+ (19311 19000) ******************************************************************************** EST sequence 280 +strand 446 n (File: SGN-E353214+) 1 GAGTTTTTTT TTTTTTTTTT TTTTTTTTTG GTTAAATCAC AAATTTAAAC ATTTAATTTT 61 TACCGATCAT ATATTATCAA CCAAACCAAA CTACAAGTCA GTCTTAATTT CTCTAACAAT 121 ATTTCATTCT AATACATGAG AGACATATAG ACTTTCACTA GAGCCTCTTT GTCTCTCTTT 181 TGAAAATTCT ACTAATTAAA CATTCAAATC TCTACACAAG AGAAAGTGAA GCAACAATAT 241 GAAAAAACTG AAGATTCTGA AGAAGCTCTT TTGCATGACA CGTGGCTCGT TCCTCCACTC 301 TGGTGAACAG CTCATCACTG AGCGGTTATT GAGGGATTCT TGAAGTGGAC TTCTAATAGG 361 CACTCAGTGA GAAGTCCAAT TGCAGTTGTG TCTGCCTAGT CAAAAATTGG CTATATAAGT 421 GCATTAAGTA CTCGGACATT TGAAAA Predicted gene structure (within gDNA segment 23470 to 18602): Exon 1 19610 19472 ( 139 n); cDNA 308 443 ( 136 n); score: 0.838 PPA cDNA 29 3 MATCH C08HBa0165B06.1- SGN-E353214+ 0.838 139 0.312 C PGS_C08HBa0165B06.1-_SGN-E353214+ (19610 19472) Alignment (genomic DNA sequence = upper lines): CAGTTCAGAA GT-TGTGGTT GTTGAGGGAT TCTTGAAGTG GACTTCTACT AGGCACTCTG 19552 ||| ||| | | | |||| ||||||||| |||||||||| |||||||| | |||||||| | CAGCTCATCA CTGAGCGGTT ATTGAGGGAT TCTTGAAGTG GACTTCTAAT AGGCACTCAG 367 TGAGAAGTCC AATTGCAGTT GTATTGGTCT AGTGAAAAAT TGGCTATATA TATAAGTGCA 19492 |||||||||| |||||||||| || | | || ||| |||||| |||||||||| | ||||| TGAGAAGTCC AATTGCAGTT GTGTCTGCCT AGTCAAAAAT TGGCTATATA -A---GTGCA 423 TAAAGTACTC GAACATTTGA 19472 | |||||||| | |||||||| TTAAGTACTC GGACATTTGA 443 hqPGS_C08HBa0165B06.1-_SGN-E353214+ (19610 19472) ******************************************************************************** EST sequence 314 +strand 441 n (File: SGN-E307529+) 1 TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 61 AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 121 TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 181 TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 241 AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 301 CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 361 GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT ATAAGTGCAT 421 AAAGTACTCG AAAAAAAAAA A Predicted gene structure (within gDNA segment 20510 to 18779): Exon 1 19910 19479 ( 432 n); cDNA 1 432 ( 432 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E307529+ 1.000 432 0.980 C PGS_C08HBa0165B06.1-_SGN-E307529+ (19910 19479) Alignment (genomic DNA sequence = upper lines): TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 19851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 60 AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 19791 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 120 TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 19731 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 180 TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 19671 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 240 AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 19611 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 300 CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 19551 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 360 GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT ATAAGTGCAT 19491 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT ATAAGTGCAT 420 AAAGTACTCG AA 19479 |||||||||| || AAAGTACTCG AA 432 hqPGS_C08HBa0165B06.1-_SGN-E307529+ (19910 19479) ******************************************************************************** EST sequence 108 -strand 493 n (File: SGN-E287935-) 1 ATAATGATAT ATCAATATAA TTCTTAATTT TGAAATAAGA ATGTTTTTTC TGTTATTAAG 61 TCTGCAATGA TGACAACGGC TGACACGTTA AACCTTGCTA ATAGTCCAAT ACTCGATGAA 121 AGGCTCCTTC CTGCTGACAT CTATGCAATT GGTGCAGGAC ATGTTAATCC ATCAAGGGCA 181 AATGATCCAG GACTAGTTTA TGATACACCA TTCGAGGACT ATGTACCTTA TTTATGTGGT 241 TTGAAGTACA CAGATCAACA GGTAGGTAAC CTGATACAAC GCAGGGTGAA TTGCTCGGAG 301 GTGAAAAGTA TCCTTGAAGC ACAATTAAAC TATCCTTCGT TTTCCATATT TGGACTTGGA 361 TCAACTCCTC AGACATATAC CAGAACTGTA ACCAATGTTG GTGATGCTAC ATCATCTTAC 421 AAAGTGGAGG TAGCTTCACC AGAAGGCGTT GCCATCGAAG TTGAACCCTC CGAGCTAAAT 481 TTCTCCGAGT TGA Predicted gene structure (within gDNA segment 22043 to 18010): Exon 1 20097 19654 ( 444 n); cDNA 50 493 ( 444 n); score: 0.881 MATCH C08HBa0165B06.1- SGN-E287935- 0.881 444 0.901 C PGS_C08HBa0165B06.1-_SGN-E287935- (20097 19654) Alignment (genomic DNA sequence = upper lines): CTGCTATTAA GTCTGCAATC ATGACAACCG CTTACACTTT AAACCTTGCC AGTAGTCCAA 20038 ||| |||||| ||||||||| |||||||| | || |||| || ||||||||| | |||||||| CTGTTATTAA GTCTGCAATG ATGACAACGG CTGACACGTT AAACCTTGCT AATAGTCCAA 109 TACTAGATGA AAGGTTACTT CCTGCAGACA TCTTTGCAAT TGGTGCAGGA CACGTTAATC 19978 |||| ||||| |||| | ||| ||||| |||| ||| |||||| |||||||||| || ||||||| TACTCGATGA AAGGCTCCTT CCTGCTGACA TCTATGCAAT TGGTGCAGGA CATGTTAATC 169 CATCAAGTGC AAATGATCCA GGACTAGTTT ATGATACCCC CTCCGAGGAC TATTTCCCGT 19918 ||||||| || |||||||||| |||||||||| ||||||| || | ||||||| ||| | || | CATCAAGGGC AAATGATCCA GGACTAGTTT ATGATACACC ATTCGAGGAC TATGTACCTT 229 ATTTATGTGG TTTGAGGTAC ACAAATGCAC AGGTAAGTAA ACTGTTACAA CGCAAGGTAA 19858 |||||||||| ||||| |||| ||| || || ||||| |||| ||| ||||| |||| ||| | ATTTATGTGG TTTGAAGTAC ACAGATCAAC AGGTAGGTAA CCTGATACAA CGCAGGGTGA 289 ATTGCTTAGA AGTAAAGAGT ATCCCTGAAG CAGAATTAAA CTATCCTTCG TTTTCCATAT 19798 |||||| || || || ||| |||| ||||| || ||||||| |||||||||| |||||||||| ATTGCTCGGA GGTGAAAAGT ATCCTTGAAG CACAATTAAA CTATCCTTCG TTTTCCATAT 349 TTGGACTTGG ATCAACTCCT CAGACATACA CAAGAACTGT GACCAACGTT GGTGATGTTG 19738 |||||||||| |||||||||| |||||||| | | |||||||| ||||| ||| ||||||| | TTGGACTTGG ATCAACTCCT CAGACATATA CCAGAACTGT AACCAATGTT GGTGATGCTA 409 CATCATCTTA CAAAGTGGAG ATAGCTTCAC CTATAGGAGT TGCCATAGAA GTTGTACCCA 19678 |||||||||| |||||||||| ||||||||| | ||| || |||||| ||| |||| |||| CATCATCTTA CAAAGTGGAG GTAGCTTCAC CAGAAGGCGT TGCCATCGAA GTTGAACCCT 469 CAGAACTAAA TTTCTCCAAG TTGA 19654 | || ||||| ||||||| || |||| CCGAGCTAAA TTTCTCCGAG TTGA 493 hqPGS_C08HBa0165B06.1-_SGN-E287935- (20097 19654) ******************************************************************************** EST sequence 213 +strand 708 n (File: SGN-E213673+) 1 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 61 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 121 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 181 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 241 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 301 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 361 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 421 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 481 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 541 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 601 CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 661 ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAACT Predicted gene structure (within gDNA segment 21067 to 17548): Exon 1 20467 19760 ( 708 n); cDNA 1 708 ( 708 n); score: 0.888 MATCH C08HBa0165B06.1- SGN-E213673+ 0.888 708 1.000 C PGS_C08HBa0165B06.1-_SGN-E213673+ (20467 19760) Alignment (genomic DNA sequence = upper lines): TCAGCTGATG CTCATGTTCT TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT 20408 |||||||||| |||||||||| |||||| ||| | ||||||| |||||||||| || || |||| TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 60 CTTACTTATA CAAACTCAAT ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA 20348 | | | |||| |||||||||| ||| |||||| |||| || ||||| |||| ||||||| || CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 120 ATTGGAGATG AAAACGCTCC CATAGTTGCT TCATTTTCTT CTCGCGGACC AAATAAACCT 20288 ||||||||| |||| ||||| ||||||||| ||||||||| |||||||||| || ||||||| ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 180 AGTCCTGGCA TCTTGAAACC TGACATAATC GGTCCTGGTG TTAATATCCT TGCTGCTTGG 20228 | |||||| | |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 240 CCTACCTCCG TGGATGACAA CAAAAAAACC AAATCCACAT TCAATATTAT ATCAGGCACC 20168 ||||| || | |||||||||| ||| | ||| |||||||||| |||||||||| |||||||||| CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 300 TCGATGTCTT GCCCTCACCT TAGTGGCGTA GCAGCTCTGC TGAAGAGCAC ACATCCTGAT 20108 |||||||||| |||| ||||| |||||| ||| |||||||||| ||||||| || |||||||||| TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 360 TGGTCTCCTG CTGCTATTAA GTCTGCAATC ATGACAACCG CTTACACTTT AAACCTTGCC 20048 |||||||||| ||| |||||| ||||||||| |||||||||| || |||| || |||||||||| TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 420 AGTAGTCCAA TACTAGATGA AAGGTTACTT CCTGCAGACA TCTTTGCAAT TGGTGCAGGA 19988 |||||||||| |||| || | |||| | | | ||||| || | ||| |||||| ||||||||| AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 480 CACGTTAATC CATCAAGTGC AAATGATCCA GGACTAGTTT ATGATACCCC CTCCGAGGAC 19928 || ||||||| |||| || || |||||||||| |||||||||| |||||||||| | ||||| CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 540 TATTTCCCGT ATTTATGTGG TTTGAGGTAC ACAAATGCAC AGGTAAGTAA ACTGTTACAA 19868 ||| | || | |||||||||| ||||| ||| |||||| ||| ||||| |||| | |||||| | TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 600 CGCAAGGTAA ATTGCTTAGA AGTAAAGAGT ATCCCTGAAG CAGAATTAAA CTATCCTTCG 19808 |||| ||| | |||||| || || | ||| |||||||||| || ||||||| |||||||| CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 660 TTTTCCATAT TTGGACTTGG ATCAACTCCT CAGACATACA CAAGAACT 19760 ||| ||||| ||||||| |||||||||| |||||||||| | |||||| ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAACT 708 hqPGS_C08HBa0165B06.1-_SGN-E213673+ (20467 19760) ******************************************************************************** EST sequence 174 +strand 634 n (File: SGN-E213088+) 1 AAAATTCGTG CCTATACAAA CTCAATATCG AACCCTGTTG CTACAATCAC AATCCAAGGA 61 ACAGTAATTG GAGATAAAAA TGCTCCAATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 121 AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 181 GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 241 GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGGGTAGCAG CTCTGCTGAA GAGAACACAT 301 CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA CACATTAAAC 361 CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA TGCAATAGGT 421 GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACCCCATTT 481 GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT AGGTAAATTG 541 TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 601 CCTTCATTTT GCATATCGAG ACTTGGATCA ACTC Predicted gene structure (within gDNA segment 21886 to 17748): Exon 1 20411 19780 ( 632 n); cDNA 3 634 ( 632 n); score: 0.888 MATCH C08HBa0165B06.1- SGN-E213088+ 0.888 632 0.997 C PGS_C08HBa0165B06.1-_SGN-E213088+ (20411 19780) Alignment (genomic DNA sequence = upper lines): AATTCTTACT TATACAAACT CAATATCAAA CCCTACAGCT AAAATCACAT TCCAAGGAAC 20352 ||||| | | |||||||||| ||||||| || |||| ||| | ||||||| |||||||||| AATTCGTGCC TATACAAACT CAATATCGAA CCCTGTTGCT ACAATCACAA TCCAAGGAAC 62 AATAATTGGA GATGAAAACG CTCCCATAGT TGCTTCATTT TCTTCTCGCG GACCAAATAA 20292 | |||||||| ||| |||| | |||| ||||| |||| ||||| |||||||||| |||||| ||| AGTAATTGGA GATAAAAATG CTCCAATAGT TGCTGCATTT TCTTCTCGCG GACCAAGTAA 122 ACCTAGTCCT GGCATCTTGA AACCTGACAT AATCGGTCCT GGTGTTAATA TCCTTGCTGC 20232 ||||| |||| || ||||||| |||||||||| ||| |||||| |||||||||| |||| ||||| ACCTAATCCT GGGATCTTGA AACCTGACAT AATTGGTCCT GGTGTTAATA TCCTCGCTGC 182 TTGGCCTACC TCCGTGGATG ACAACAAAAA AACCAAATCC ACATTCAATA TTATATCAGG 20172 ||||||||| || ||||||| ||||||| | ||||||||| |||||||||| |||||||||| TTGGCCTACT TCTGTGGATG ACAACAAGGA CACCAAATCC ACATTCAATA TTATATCAGG 242 CACCTCGATG TCTTGCCCTC ACCTTAGTGG CGTAGCAGCT CTGCTGAAGA GCACACATCC 20112 |||||||||| |||||||| | |||||||||| ||||||||| |||||||||| | |||||||| CACCTCGATG TCTTGCCCAC ACCTTAGTGG GGTAGCAGCT CTGCTGAAGA GAACACATCC 302 TGATTGGTCT CCTGCTGCTA TTAAGTCTGC AATCATGACA ACCGCTTACA CTTTAAACCT 20052 |||||||||| ||||||| || |||||||||| ||| |||||| |||||| ||| | |||||||| TGATTGGTCT CCTGCTGTTA TTAAGTCTGC AATGATGACA ACCGCTGACA CATTAAACCT 362 TGCCAGTAGT CCAATACTAG ATGAAAGGTT ACTTCCTGCA GACATCTTTG CAATTGGTGC 19992 |||||||||| |||||||| | | ||||| | | |||||| || |||| || |||| ||||| TGCCAGTAGT CCAATACTCG ACCAAAGGCT CCGTCCTGCT GATATCTATG CAATAGGTGC 422 AGGACACGTT AATCCATCAA GTGCAAATGA TCCAGGACTA GTTTATGATA CCCCCTCCGA 19932 |||||| ||| |||||||| | | |||||||| |||||||||| |||||||||| |||| | || AGGACATGTT AATCCATCGA GGGCAAATGA TCCAGGACTA GTTTATGATA CCCCATTTGA 482 GGACTATTTC CCGTATTTAT GTGGTTTGAG GTACACAAAT GCACAGGTAA GTAAACTGTT 19872 ||| ||| | || ||||||| ||||||||| ||||||||| |||||||| ||||| |||| GGATTATGTA CCTTATTTAT GTGGTTTGAA CTACACAAAT CCACAGGTAG GTAAATTGTT 542 ACAACGCAAG GTAAATTGCT TAGAAGTAAA GAGTATCCCT GAAGCAGAAT TAAACTATCC 19812 || ||||| | || ||||||| || || | ||||||||| |||||| ||| |||||||||| ACGACGCAGG GTGAATTGCT CGGAGGTTGA AAGTATCCCT GAAGCACAAT TAAACTATCC 602 TTCGTTTTCC ATATTTGGAC TTGGATCAAC TC 19780 ||| |||| | |||| ||| |||||||||| || TTCATTTTGC ATATCGAGAC TTGGATCAAC TC 634 hqPGS_C08HBa0165B06.1-_SGN-E213088+ (20411 19780) ******************************************************************************** EST sequence 192 +strand 704 n (File: SGN-E212584+) 1 AAGATAGTAT TATGTTTAGC ATTCGGCGGT GTAGCCAATG TTGATAAAGG ACAAGCTGTG 61 AAGGATGCTG GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA 121 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 181 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 241 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 301 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 361 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 421 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 481 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 541 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 601 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 661 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGT Predicted gene structure (within gDNA segment 21592 to 18788): Exon 1 20548 19886 ( 663 n); cDNA 40 702 ( 663 n); score: 0.896 MATCH C08HBa0165B06.1- SGN-E212584+ 0.896 663 0.942 C PGS_C08HBa0165B06.1-_SGN-E212584+ (20548 19886) Alignment (genomic DNA sequence = upper lines): GTTGTAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GTATGATTGC CATCAACCTG 20489 |||| |||| |||||||||| |||||||||| |||||||||| | ||||||| |||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 99 CCAGAAGATG GTGTCACAAA ATCAGCTGAT GCTCATGTTC TTCCAGCTTT GGAGGTTTCA 20429 || || ||| ||||||| || |||||||||| |||||||||| ||||||| || || |||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 159 GCTGCAGATG GAATCAGAAT TCTTACTTAT ACAAACTCAA TATCAAACCC TACAGCTAAA 20369 |||||||||| ||| || ||| || | | ||| |||||||||| |||| ||||| | |||| | GCTGCAGATG GAAGCAAAAT TCGTGCCTAT ACAAACTCAA TATCGAACCC TGTTGCTACA 219 ATCACATTCC AAGGAACAAT AATTGGAGAT GAAAACGCTC CCATAGTTGC TTCATTTTCT 20309 |||||| ||| |||||||| | |||||||||| |||| |||| | |||||||| | |||||||| ATCACAATCC AAGGAACAGT AATTGGAGAT AAAAATGCTC CAATAGTTGC TGCATTTTCT 279 TCTCGCGGAC CAAATAAACC TAGTCCTGGC ATCTTGAAAC CTGACATAAT CGGTCCTGGT 20249 |||||||||| ||| |||||| || |||||| |||||||||| |||||||||| ||||||||| TCTCGCGGAC CAAGTAAACC TAATCCTGGG ATCTTGAAAC CTGACATAAT TGGTCCTGGT 339 GTTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAAAAAAC CAAATCCACA 20189 |||||||||| | |||||||| |||||| || |||||||||| |||| | || |||||||||| GTTAATATCC TCGCTGCTTG GCCTACTTCT GTGGATGACA ACAAGGACAC CAAATCCACA 399 TTCAATATTA TATCAGGCAC CTCGATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 20129 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||| || |||||||||| TTCAATATTA TATCAGGCAC CTCGATGTCT TGCCCACACC TTAGTGGGGT AGCAGCTCTG 459 CTGAAGAGCA CACATCCTGA TTGGTCTCCT GCTGCTATTA AGTCTGCAAT CATGACAACC 20069 |||||||| | |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTGAAGAGAA CACATCCTGA TTGGTCTCCT GCTGTTATTA AGTCTGCAAT GATGACAACC 519 GCTTACACTT TAAACCTTGC CAGTAGTCCA ATACTAGATG AAAGGTTACT TCCTGCAGAC 20009 ||| |||| | |||||||||| |||||||||| ||||| || ||||| | | |||||| || GCTGACACAT TAAACCTTGC CAGTAGTCCA ATACTCGACC AAAGGCTCCG TCCTGCTGAT 579 ATCTTTGCAA TTGGTGCAGG ACACGTTAAT CCATCAAGTG CAAATGATCC AGGACTAGTT 19949 |||| ||||| | |||||||| ||| |||||| ||||| || | |||||||||| |||||||||| ATCTATGCAA TAGGTGCAGG ACATGTTAAT CCATCGAGGG CAAATGATCC AGGACTAGTT 639 TATGATACCC CCTCCGAGGA CTATTTCCCG TATTTATGTG GTTTGAGGTA CACAAATGCA 19889 |||||||||| | | ||||| ||| | || |||||||||| |||||| || ||||||| || TATGATACCC CATTTGAGGA TTATGTACCT TATTTATGTG GTTTGAACTA CACAAATCCA 699 CAG 19886 ||| CAG 702 hqPGS_C08HBa0165B06.1-_SGN-E212584+ (20548 19886) ******************************************************************************** EST sequence 241 +strand 592 n (File: SGN-E329031+) 1 ATTCTCATCA ATGAACAAGA AGAGGGTGTG ACTAAATCAG CTGAAGCTCA TGTCCTTCCT 61 GCATTGGATG TTTCAAATGC TGATGGAAAG AAAATTCTTG CCTATATGAA CTCATCTTCA 121 AATCCGGTTG CTTCAATCAC CTTCCATGGA ACTGTAATTG GAGACAAAAA TGCTCCTATA 181 GTTGCTTCAT TTTCCTCACG AGGACCAAGC GTAGCAAGTC CTGGCATCTT AAAACCTGAC 241 ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA CCTCCGTGGA TAACAACAAA 301 AACACAAAAT CAACATTCAA TATAGTATCC GGAACCTCAA TGTCTTGCCC TCACCTTAGT 361 GGTGTTGCAG CTCTGCTGAA GAGCGCACAT CCTGATTGGT CTCCTGCAGC TATTAAGTCA 421 GCAATGATGA CAACAGCTGA CACAGTAAAC CTCGCCAACA GTCCAATACT GGACGAAAGG 481 CTCATTTCTG CTGATCTCTT TGCAATGGGT GCAGGACATG TTAATCCATC GAGAGNCAGT 541 GATCCAGGAC TAGTTTATGA TACACCATTC GAAGACTACA TTCCTTATTT AT Predicted gene structure (within gDNA segment 23182 to 17637): Exon 1 20503 19912 ( 592 n); cDNA 1 592 ( 592 n); score: 0.829 MATCH C08HBa0165B06.1- SGN-E329031+ 0.829 592 1.000 C PGS_C08HBa0165B06.1-_SGN-E329031+ (20503 19912) Alignment (genomic DNA sequence = upper lines): ATTGCCATCA ACCTGCCAGA AGATGGTGTC ACAAAATCAG CTGATGCTCA TGTTCTTCCA 20444 ||| ||||| | | ||| ||| ||||| || ||||||| |||| ||||| ||| ||||| ATTCTCATCA ATGAACAAGA AGAGGGTGTG ACTAAATCAG CTGAAGCTCA TGTCCTTCCT 60 GCTTTGGAGG TTTCAGCTGC AGATGGAATC AGAATTCTTA CTTATACAAA CTCAATATCA 20384 || ||||| | ||||| ||| ||||||| | ||||||| | |||| || |||| ||| GCATTGGATG TTTCAAATGC TGATGGAAAG AAAATTCTTG CCTATATGAA CTCATCTTCA 120 AACCCTACAG CTAAAATCAC ATTCCAAGGA ACAATAATTG GAGATGAAAA CGCTCCCATA 20324 || || | || |||||| ||||| ||| || |||||| |||| |||| ||||| ||| AATCCGGTTG CTTCAATCAC CTTCCATGGA ACTGTAATTG GAGACAAAAA TGCTCCTATA 180 GTTGCTTCAT TTTCTTCTCG CGGACCAAAT AAACCTAGTC CTGGCATCTT GAAACCTGAC 20264 |||||||||| |||| || || ||||||| | | |||| |||||||||| ||||||||| GTTGCTTCAT TTTCCTCACG AGGACCAAGC GTAGCAAGTC CTGGCATCTT AAAACCTGAC 240 ATAATCGGTC CTGGTGTTAA TATCCTTGCT GCTTGGCCTA CCTCCGTGGA TGACAACAAA 20204 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| | |||||||| ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA CCTCCGTGGA TAACAACAAA 300 AAAACCAAAT CCACATTCAA TATTATATCA GGCACCTCGA TGTCTTGCCC TCACCTTAGT 20144 || || |||| | |||||||| ||| |||| || ||||| | |||||||||| |||||||||| AACACAAAAT CAACATTCAA TATAGTATCC GGAACCTCAA TGTCTTGCCC TCACCTTAGT 360 GGCGTAGCAG CTCTGCTGAA GAGCACACAT CCTGATTGGT CTCCTGCTGC TATTAAGTCT 20084 || || |||| |||||||||| |||| ||||| |||||||||| ||||||| || ||||||||| GGTGTTGCAG CTCTGCTGAA GAGCGCACAT CCTGATTGGT CTCCTGCAGC TATTAAGTCA 420 GCAATCATGA CAACCGCTTA CACTTTAAAC CTTGCCAGTA GTCCAATACT AGATGAAAGG 20024 ||||| |||| |||| ||| | ||| ||||| || |||| | |||||||||| || |||||| GCAATGATGA CAACAGCTGA CACAGTAAAC CTCGCCAACA GTCCAATACT GGACGAAAGG 480 TTACTTCCTG CAGACATCTT TGCAATTGGT GCAGGACACG TTAATCCATC AAGTGCAAAT 19964 | || ||| | || |||| |||||| ||| |||||||| | |||||||||| || | | | CTCATTTCTG CTGATCTCTT TGCAATGGGT GCAGGACATG TTAATCCATC GAGAGNCAGT 540 GATCCAGGAC TAGTTTATGA TACCCCCTCC GAGGACTATT TCCCGTATTT AT 19912 |||||||||| |||||||||| ||| || | | || ||||| | || ||||| || GATCCAGGAC TAGTTTATGA TACACCATTC GAAGACTACA TTCCTTATTT AT 592 hqPGS_C08HBa0165B06.1-_SGN-E329031+ (20503 19912) ******************************************************************************** EST sequence 411 +strand 409 n (File: SGN-E317658+) 1 GAGACAAAAA TGCTCCTATA GGTGCTTCAT TTACCTGAGG AGGACCAAGC GTAGCAGGTC 61 CTGGCATCTT AAAACCTGAC ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA 121 CCTCCGTGGA TAACAACAAA AACACAAAAT CAACATTCAA TATAGTATCC AGAACCTCAA 181 TGTGTTGCCC TCACCTTAGT GGTGTTGCAG CTCTGCTGAA AAGCGCACAT ACTGATTGGT 241 CTCCTGCAGC TATTAAGTGG GCAATGATGA CAACAGCTGA CACAGTAAAC CTCTCCGACA 301 GTCCAATACT GGACGAAAGG CTCATTTATG CTGATCTCTT TGCAATGGGT GCAGGACATG 361 TTAATCCATC GAGAGCAGGT GATCCAGGAC TAGTTTATGA TACACCATT Predicted gene structure (within gDNA segment 21582 to 16823): Exon 1 20343 19938 ( 406 n); cDNA 1 406 ( 406 n); score: 0.835 MATCH C08HBa0165B06.1- SGN-E317658+ 0.835 406 0.993 C PGS_C08HBa0165B06.1-_SGN-E317658+ (20343 19938) Alignment (genomic DNA sequence = upper lines): GAGATGAAAA CGCTCCCATA GTTGCTTCAT TTTCTTCTCG CGGACCAAAT AAACCTAGTC 20284 |||| |||| ||||| ||| | |||||||| || | | | ||||||| | | ||| GAGACAAAAA TGCTCCTATA GGTGCTTCAT TTACCTGAGG AGGACCAAGC GTAGCAGGTC 60 CTGGCATCTT GAAACCTGAC ATAATCGGTC CTGGTGTTAA TATCCTTGCT GCTTGGCCTA 20224 |||||||||| ||||||||| |||||||||| |||||||||| |||||||| |||||||||| CTGGCATCTT AAAACCTGAC ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA 120 CCTCCGTGGA TGACAACAAA AAAACCAAAT CCACATTCAA TATTATATCA GGCACCTCGA 20164 |||||||||| | |||||||| || || |||| | |||||||| ||| |||| | ||||| | CCTCCGTGGA TAACAACAAA AACACAAAAT CAACATTCAA TATAGTATCC AGAACCTCAA 180 TGTCTTGCCC TCACCTTAGT GGCGTAGCAG CTCTGCTGAA GAGCACACAT CCTGATTGGT 20104 ||| |||||| |||||||||| || || |||| |||||||||| ||| ||||| ||||||||| TGTGTTGCCC TCACCTTAGT GGTGTTGCAG CTCTGCTGAA AAGCGCACAT ACTGATTGGT 240 CTCCTGCTGC TATTAAGTCT GCAATCATGA CAACCGCTTA CACTTTAAAC CTTGCCAGTA 20044 ||||||| || |||||||| ||||| |||| |||| ||| | ||| ||||| || || | CTCCTGCAGC TATTAAGTGG GCAATGATGA CAACAGCTGA CACAGTAAAC CTCTCCGACA 300 GTCCAATACT AGATGAAAGG TTACTTCCTG CAGACATCTT TGCAATTGGT GCAGGACACG 19984 |||||||||| || |||||| | || || | || |||| |||||| ||| |||||||| | GTCCAATACT GGACGAAAGG CTCATTTATG CTGATCTCTT TGCAATGGGT GCAGGACATG 360 TTAATCCATC AAGTGCAAAT GATCCAGGAC TAGTTTATGA TACCCC 19938 |||||||||| || ||| | |||||||||| |||||||||| ||| || TTAATCCATC GAGAGCAGGT GATCCAGGAC TAGTTTATGA TACACC 406 hqPGS_C08HBa0165B06.1-_SGN-E317658+ (20343 19938) ******************************************************************************** EST sequence 284 +strand 605 n (File: SGN-E308535+) 1 GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 61 AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 121 GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 181 GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 241 TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 301 GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 361 ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 421 ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 481 AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 541 ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAAGT TACTTCCTGC AGACATCTTT 601 GCAAT Predicted gene structure (within gDNA segment 21202 to 19388): Exon 1 20602 19998 ( 605 n); cDNA 1 605 ( 605 n); score: 0.998 MATCH C08HBa0165B06.1- SGN-E308535+ 0.998 605 1.000 C PGS_C08HBa0165B06.1-_SGN-E308535+ (20602 19998) Alignment (genomic DNA sequence = upper lines): GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 20543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 60 AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 20483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 120 GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 20423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 180 GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 20363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 240 TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 20303 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 300 GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 20243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 360 ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 20183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 420 ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 20123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 480 AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 20063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 540 ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAGGT TACTTCCTGC AGACATCTTT 20003 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAAGT TACTTCCTGC AGACATCTTT 600 GCAAT 19998 ||||| GCAAT 605 hqPGS_C08HBa0165B06.1-_SGN-E308535+ (20602 19998) ******************************************************************************** EST sequence 359 +strand 663 n (File: SGN-E397025+) 1 TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 61 GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 121 ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 181 GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 241 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 301 GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 361 ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 421 TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGTCCTGGT 481 GCTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAGAACAC CAAATCCACA 541 TTCAATATCA TATCAGGCAC CTCAATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 601 CTGAAATGCA CACATCCTGA TTGGTCTCCT GCTGTTATTA AATCTGCAAT GATGACAACG 661 GCT Predicted gene structure (within gDNA segment 25459 to 18205): Exon 1 20725 20066 ( 660 n); cDNA 1 663 ( 663 n); score: 0.848 MATCH C08HBa0165B06.1- SGN-E397025+ 0.848 660 0.995 C PGS_C08HBa0165B06.1-_SGN-E397025+ (20725 20066) Alignment (genomic DNA sequence = upper lines): TTTGAAGGGG AAGCTTCTTA TCGTCCACAG ATTTCCGACT CAAAATTCTT CACTCTGTAT 20666 |||||||| | || || |||| ||||||| || |||||| || ||| |||||| |||||| | | TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 60 GATGCTTCAA AAGGTAAAGG TGATCCATCT AAAACCCCTT ACTGCAAACC AGGGTCACTC 20606 |||||| ||| || | | |||||||| ||||||||| | |||| || ||| |||||| GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 120 ACTGACCCTG CAATAAAAGG AAAGATAGTC ATATGTT-AT C-C-AGGTGT CGTTTCTAAG 20549 |||||||||| | |||| ||| ||||||||| |||||| | | | || || | || ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 180 GTTGTAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GTATGATTGC CATCAACCTG 20489 |||| |||| |||||||||| |||||||||| |||||||||| | |||||| |||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 240 CCAGAAGATG GTGTCACAAA ATCAGCTGAT GCTCATGTTC TTCCAGCTTT GGAGGTTTCA 20429 || || ||| ||||||| || |||||||||| |||||||||| ||||||| || || |||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 300 GCTGCAGATG GAATCAGAAT TCTTACTTAT ACAAACTCAA TATCAAACCC TACAGCTAAA 20369 |||||||| | ||| | ||| |||| |||| | ||||||| ||||| ||| | |||| | GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 360 ATCACATTCC AAGGAACAAT AATTGGAGAT GAAAACGCTC CCATAGTTGC TTCATTTTCT 20309 || |||||| |||||||||| ||||||||| |||| |||| | || ||||| | ||||||| ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 420 TCTCGCGGAC CAAATAAACC TAGTCCTGGC ATCTTGAAAC CTGACATAAT CGGTCCTGGT 20249 || | |||| ||| || | | ||||||||| |||||||| | |||||||||| |||||||||| TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGTCCTGGT 480 GTTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAAAAAAC CAAATCCACA 20189 | |||||||| |||||||||| |||||||||| |||||||||| |||| || || |||||||||| GCTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAGAACAC CAAATCCACA 540 TTCAATATTA TATCAGGCAC CTCGATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 20129 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| TTCAATATCA TATCAGGCAC CTCAATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 600 CTGAAGAGCA CACATCCTGA TTGGTCTCCT GCTGCTATTA AGTCTGCAAT CATGACAACC 20069 ||||| ||| |||||||||| |||||||||| |||| ||||| | |||||||| |||||||| CTGAAATGCA CACATCCTGA TTGGTCTCCT GCTGTTATTA AATCTGCAAT GATGACAACG 660 GCT 20066 ||| GCT 663 hqPGS_C08HBa0165B06.1-_SGN-E397025+ (20725 20066) ******************************************************************************** EST sequence 165 +strand 617 n (File: SGN-E306389+) 1 ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 61 GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 121 AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 181 GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAAGT TGTAAAAGGA 241 CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 301 GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 361 ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 421 GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 481 AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 541 GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 601 TCANGCACCT CGATGTC Predicted gene structure (within gDNA segment 21376 to 19424): Exon 1 20776 20160 ( 617 n); cDNA 1 617 ( 617 n); score: 0.997 MATCH C08HBa0165B06.1- SGN-E306389+ 0.997 617 1.000 C PGS_C08HBa0165B06.1-_SGN-E306389+ (20776 20160) Alignment (genomic DNA sequence = upper lines): ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 20717 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 60 GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 20657 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 120 AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 20597 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 180 GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAGGT TGTAAAAGGA 20537 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAAGT TGTAAAAGGA 240 CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 20477 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 300 GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 20417 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 360 ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 20357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 420 GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 20297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 480 AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 20237 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 540 GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 20177 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 600 TCAGGCACCT CGATGTC 20160 ||| |||||| ||||||| TCANGCACCT CGATGTC 617 hqPGS_C08HBa0165B06.1-_SGN-E306389+ (20776 20160) ******************************************************************************** EST sequence 266 +strand 362 n (File: SGN-E200689+) 1 GGAAAGATAG TATTATGTTT AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT 61 GTGAAGGATG CTGGAGGTGT TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT 121 AAATCAGCTG ATGCTCATGT TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA 181 ATTCGTGCCT ATACAAACTC AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA 241 GTAATTGGAG ATAAAAATGC TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA 301 CCTAATCCTG GGATCTTGAA ACCTGACATA ATTGGTCCTG GTGTTAATAT CCTCGCTGCT 361 TG Predicted gene structure (within gDNA segment 21622 to 19538): Exon 1 20548 20229 ( 320 n); cDNA 43 362 ( 320 n); score: 0.894 MATCH C08HBa0165B06.1- SGN-E200689+ 0.894 320 0.884 C PGS_C08HBa0165B06.1-_SGN-E200689+ (20548 20229) Alignment (genomic DNA sequence = upper lines): GTTGTAAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GTATGATTGC CATCAACCTG 20489 |||| |||| |||||||||| |||||||||| |||||||||| | ||||||| |||||||| GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAACCCA 102 CCAGAAGATG GTGTCACAAA ATCAGCTGAT GCTCATGTTC TTCCAGCTTT GGAGGTTTCA 20429 || || ||| ||||||| || |||||||||| |||||||||| ||||||| || || |||||| TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 162 GCTGCAGATG GAATCAGAAT TCTTACTTAT ACAAACTCAA TATCAAACCC TACAGCTAAA 20369 |||||||||| ||| || ||| || | | ||| |||||||||| |||| ||||| | |||| | GCTGCAGATG GAAGCAAAAT TCGTGCCTAT ACAAACTCAA TATCGAACCC TGTTGCTACA 222 ATCACATTCC AAGGAACAAT AATTGGAGAT GAAAACGCTC CCATAGTTGC TTCATTTTCT 20309 |||||| ||| |||||||| | |||||||||| |||| |||| | |||||||| | |||||||| ATCACAATCC AAGGAACAGT AATTGGAGAT AAAAATGCTC CAATAGTTGC TGCATTTTCT 282 TCTCGCGGAC CAAATAAACC TAGTCCTGGC ATCTTGAAAC CTGACATAAT CGGTCCTGGT 20249 |||||||||| ||| |||||| || |||||| |||||||||| |||||||||| ||||||||| TCTCGCGGAC CAAGTAAACC TAATCCTGGG ATCTTGAAAC CTGACATAAT TGGTCCTGGT 342 GTTAATATCC TTGCTGCTTG 20229 |||||||||| | |||||||| GTTAATATCC TCGCTGCTTG 362 hqPGS_C08HBa0165B06.1-_SGN-E200689+ (20548 20229) ******************************************************************************** EST sequence 371 +strand 494 n (File: SGN-E210009+) 1 TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 61 CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 121 TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 181 AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 241 TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 301 TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 361 AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 421 TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 481 ACCTGACATA ATTG Predicted gene structure (within gDNA segment 23870 to 18495): Exon 1 20747 20259 ( 489 n); cDNA 1 492 ( 492 n); score: 0.839 MATCH C08HBa0165B06.1- SGN-E210009+ 0.839 489 0.990 C PGS_C08HBa0165B06.1-_SGN-E210009+ (20747 20259) Alignment (genomic DNA sequence = upper lines): TACACTTGGA AATACAGAGG AATTTGAAGG GGAAGCTTCT TATCGTCCAC AGATTTCCGA 20688 || || ||| ||| ||||| |||||||||| ||| || || ||||||||| |||||||| | TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 60 CTCAAAATTC TTCACTCTGT ATGATGCTTC AAAAGGTAAA GGTGATCCAT CTAAAACCCC 20628 ||||| |||| |||||||| | ||||||| | |||| | | ||||||| || ||||||| CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 120 TTACTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG TCATATG-TT 20569 ||| |||| | | |||||||| |||||||||| ||| |||| | |||||||||| | |||| || TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 180 ATC--CAGGT GTCGTTTCTA AGGTTGTAAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 20511 | | || | || | | | |||| || |||||||||| |||||||||| |||||||||| AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 240 TGGTATGATT GCCATCAACC TGCCAGAAGA TGGTGTCACA AAATCAGCTG ATGCTCATGT 20451 ||| |||||| | |||||||| || || | ||||||||| |||||||||| |||||||||| TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 300 TCTTCCAGCT TTGGAGGTTT CAGCTGCAGA TGGAATCAGA ATTCTTACTT ATACAAACTC 20391 ||||||||| |||| |||| |||||||||| ||||| || | |||| | | | |||||||||| TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 360 AATATCAAAC CCTACAGCTA AAATCACATT CCAAGGAACA ATAATTGGAG ATGAAAACGC 20331 |||||| ||| ||| |||| ||||||| | |||||||||| ||||||||| || |||| || AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 420 TCCCATAGTT GCTTCATTTT CTTCTCGCGG ACCAAATAAA CCTAGTCCTG GCATCTTGAA 20271 ||| |||||| ||| |||||| |||||||||| ||||| |||| |||| ||||| | |||||||| TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 480 ACCTGACATA AT 20259 |||||||||| || ACCTGACATA AT 492 hqPGS_C08HBa0165B06.1-_SGN-E210009+ (20747 20259) ******************************************************************************** EST sequence 234 +strand 504 n (File: SGN-E301429+) 1 CGCCCCTTGG ATTCTTACGG TAGGCGCCAG CACTACTGAT AGAAAGATAA AAGTTACTGT 61 TACACTTGGA AATACAGAGG AATTTGAAGG GGAAGCTTCT TATCGTCCAC AGATTTCCGA 121 CTCAAAATTC TTCACTCTGT ATGATGCTTC AAAAGGTAAA GGTGATCCAT CTAAAACCCC 181 TTACTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG TCATATGTTA 241 TCCAGGTGTC GTTTCTAAGG TTGTAAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG 301 TATGATTGCC ATCAACCTGC CAGAAGATGG TGTCACAAAA TCAGCTGATG CTCATGTTCT 361 TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT CTTACTTATA CAAACTCAAT 421 ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA ATTGGAGATG AAAACGCTCC 481 CATAGTTGCT TCATTTTCTT CTCG Predicted gene structure (within gDNA segment 21407 to 19694): Exon 1 20807 20304 ( 504 n); cDNA 1 504 ( 504 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E301429+ 1.000 504 1.000 C PGS_C08HBa0165B06.1-_SGN-E301429+ (20807 20304) Alignment (genomic DNA sequence = upper lines): CGCCCCTTGG ATTCTTACGG TAGGCGCCAG CACTACTGAT AGAAAGATAA AAGTTACTGT 20748 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCCCTTGG ATTCTTACGG TAGGCGCCAG CACTACTGAT AGAAAGATAA AAGTTACTGT 60 TACACTTGGA AATACAGAGG AATTTGAAGG GGAAGCTTCT TATCGTCCAC AGATTTCCGA 20688 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACTTGGA AATACAGAGG AATTTGAAGG GGAAGCTTCT TATCGTCCAC AGATTTCCGA 120 CTCAAAATTC TTCACTCTGT ATGATGCTTC AAAAGGTAAA GGTGATCCAT CTAAAACCCC 20628 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAAATTC TTCACTCTGT ATGATGCTTC AAAAGGTAAA GGTGATCCAT CTAAAACCCC 180 TTACTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG TCATATGTTA 20568 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACTGCAAA CCAGGGTCAC TCACTGACCC TGCAATAAAA GGAAAGATAG TCATATGTTA 240 TCCAGGTGTC GTTTCTAAGG TTGTAAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG 20508 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAGGTGTC GTTTCTAAGG TTGTAAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG 300 TATGATTGCC ATCAACCTGC CAGAAGATGG TGTCACAAAA TCAGCTGATG CTCATGTTCT 20448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGATTGCC ATCAACCTGC CAGAAGATGG TGTCACAAAA TCAGCTGATG CTCATGTTCT 360 TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT CTTACTTATA CAAACTCAAT 20388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT CTTACTTATA CAAACTCAAT 420 ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA ATTGGAGATG AAAACGCTCC 20328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA ATTGGAGATG AAAACGCTCC 480 CATAGTTGCT TCATTTTCTT CTCG 20304 |||||||||| |||||||||| |||| CATAGTTGCT TCATTTTCTT CTCG 504 hqPGS_C08HBa0165B06.1-_SGN-E301429+ (20807 20304) ******************************************************************************** EST sequence 200 +strand 655 n (File: SGN-E335107+) 1 TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 61 GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 121 AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 181 TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 241 CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 301 TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 361 AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 421 TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 481 GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 541 CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 601 TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG Predicted gene structure (within gDNA segment 21594 to 18248): Exon 1 20994 20343 ( 652 n); cDNA 1 655 ( 655 n); score: 0.850 MATCH C08HBa0165B06.1- SGN-E335107+ 0.850 652 0.995 C PGS_C08HBa0165B06.1-_SGN-E335107+ (20994 20343) Alignment (genomic DNA sequence = upper lines): TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTATTTCA ATGTCCCTTG 20935 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 60 GTGGAGGTCC AGTCCCTTTC CATAGTGACA ATATTGCTCT CGGGGCATAC AGTGCAACAG 20875 |||||||||| | |||||||| ||||| |||| |||||||| | |||||| ||| |||||||| | GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 120 AAAGAGGGAT TCTTGTAAGT GCCTCTGCTG GAAATAGTGG TCCATCCCTT ATCACAGCAG 20815 ||||||| || |||||||||| ||||||| |||||||||| ||||||| || |||||||||| AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 180 GGAACACCGC CCCTTGGATT CTTACGGTAG GCGCCAGCAC TACTGATAGA AAGATAAAAG 20755 |||||||| |||||||||| |||||||||| | |||||||| ||| ||| |||||||||| TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 240 TTACTGTTAC ACTTGGAAAT ACAGAGGAAT TTGAAGGGGA AGCTTCTTAT CGTCCACAGA 20695 ||||||||| ||||||||| |||||||| ||||||| || | || ||||| |||||| ||| CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 300 TTTCCGACTC AAAATTCTTC ACTCTGTATG ATGCTTCAAA AGGTAAAGGT GATCCATCTA 20635 ||||| || | || ||||||| ||||| | || ||||| |||| | | | |||||||| TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 360 AAACCCCTTA CTGCAAACCA GGGTCACTCA CTGACCCTGC AATAAAAGGA AAGATAGTCA 20575 |||||||||| |||| || | || ||||||| |||||||||| |||| |||| |||||||| AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 420 TATGTT-ATC -C-AGGTGTC GTTTCTAAGG TTGTAAAAGG ACAAGCTGTG AAGGATGCTG 20518 |||||| | | | || || | || | ||| ||||| |||||||||| |||||||||| TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 480 GAGGTGTTGG TATGATTGCC ATCAACCTGC CAGAAGATGG TGTCACAAAA TCAGCTGATG 20458 |||||||||| |||||| | ||||||| || || |||| |||||| ||| |||||||||| GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 540 CTCATGTTCT TCCAGCTTTG GAGGTTTCAG CTGCAGATGG AATCAGAATT CTTACTTATA 20398 |||||||||| |||||| ||| | ||||||| ||||||| || || | |||| ||| |||| | CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 600 CAAACTCAAT ATCAAACCCT ACAGCTAAAA TCACATTCCA AGGAACAATA ATTGG 20343 ||||||| ||||| |||| |||| || | ||||||| |||||||||| ||||| TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG 655 hqPGS_C08HBa0165B06.1-_SGN-E335107+ (20994 20343) ******************************************************************************** EST sequence 387 +strand 556 n (File: SGN-E208913+) 1 AAGTATTGCT CTCGGGGCGT ACAGTGCAAC ACAAAGAGGC ATTCTTGTTA GTTGCTCAGC 61 AGGCAATAAT GGTCCTTCGC CTGCCTCAGT AGATAACTCA GCCCCTTGGA TTCTTACAGT 121 AGGTGCCAGC ACGCTTGATA GAAAGATAAA AGCTACTGCT AAGCTCGGAA ATGGAGAGGA 181 ATTTGAAGGA GAATCTGCTT ATCGTCCAAA GATTTCCAAC TCAACATTCT TCACTCTATT 241 TGATGCTGCA AAAAATGCAA AAGATCCATC TGAAACCCCT TATTGCAGAC GAGGGTCACT 301 CACTGACCCT GCTATAAGAG GAAAGATAGT ATTATGTTTA GCATTCGGCG GTGTAGCCAA 361 TGTTGATAAA GGACAAGCTG TGAAGGATGC TGGAGGTGTT GGCATGATTG TCATCAACCC 421 ATCACAATAT GGTGTCACTA AATCAGCTGA TGCTCATGTT CTTCCAGCAT TTCTGGTTGT 481 TTCAGCTGCA GATGGAAGCA AAATTCGTGC CTATACAAAC TCAATATCGA ACCCTGTTGC 541 TACAATCACA ATCCAA Predicted gene structure (within gDNA segment 25460 to 19495): Exon 1 20903 20357 ( 547 n); cDNA 4 556 ( 553 n); score: 0.808 MATCH C08HBa0165B06.1- SGN-E208913+ 0.808 547 0.984 C PGS_C08HBa0165B06.1-_SGN-E208913+ (20903 20357) Alignment (genomic DNA sequence = upper lines): TATTGCTCTC GGGGCATACA GTGCAACAGA AAGAGGGATT CTTGTAAGTG CCTCTGCTGG 20844 |||||||||| ||||| |||| |||||||| | |||||| ||| ||||| ||| ||| || || TATTGCTCTC GGGGCGTACA GTGCAACACA AAGAGGCATT CTTGTTAGTT GCTCAGCAGG 63 AAATAGTGGT CCATCCCTTA TCACAGCAGG GAACACCGCC CCTTGGATTC TTACGGTAGG 20784 |||| |||| || || | | | ||| || ||| | ||| |||||||||| |||| ||||| CAATAATGGT CCTTCGCCTG CCTCAGTAGA TAACTCAGCC CCTTGGATTC TTACAGTAGG 123 CGCCAGCACT ACTGATAGAA AGATAAAAGT TACTGTTACA CTTGGAAATA CAGAGGAATT 20724 |||||||| |||||||| ||||||||| ||||| || || |||||| ||||||||| TGCCAGCACG CTTGATAGAA AGATAAAAGC TACTGCTAAG CTCGGAAATG GAGAGGAATT 183 TGAAGGGGAA GCTTCTTATC GTCCACAGAT TTCCGACTCA AAATTCTTCA CTCTGTATGA 20664 |||||| ||| || |||||| ||||| |||| |||| ||||| | |||||||| |||| | ||| TGAAGGAGAA TCTGCTTATC GTCCAAAGAT TTCCAACTCA ACATTCTTCA CTCTATTTGA 243 TGCTTCAAAA GGTAAAGGTG ATCCATCTAA AACCCCTTAC TGCAAACCAG GGTCACTCAC 20604 |||| ||||| | | | |||||||| | ||||||||| |||| || || |||||||||| TGCTGCAAAA AATGCAAAAG ATCCATCTGA AACCCCTTAT TGCAGACGAG GGTCACTCAC 303 TGACCCTGCA ATAAAAGGAA AGATAGTCAT ATG-TTATC- -CAGGTGTCG TTTCTAAGGT 20547 ||||||||| |||| ||||| ||||||| | ||| ||| | || | | | | || || TGACCCTGCT ATAAGAGGAA AGATAGTATT ATGTTTAGCA TTCGGCGGTG TAGCCAATGT 363 TGTAAAAGGA CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC 20487 || |||||| |||||||||| |||||||||| ||||||||| ||||||| || |||||| | TGATAAAGGA CAAGCTGTGA AGGATGCTGG AGGTGTTGGC ATGATTGTCA TCAACCCATC 423 AGAAGATGGT GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGC--TT- TGGAGGTTTC 20430 | || ||||| ||||| |||| |||||||||| |||||||||| ||||| || ||| ||||| ACAATATGGT GTCACTAAAT CAGCTGATGC TCATGTTCTT CCAGCATTTC TGGTTGTTTC 483 AGCTGCAGAT GGAATCAGAA TTCTTACTTA TACAAACTCA ATATCAAACC CTACAGCTAA 20370 |||||||||| |||| || || ||| | | || |||||||||| ||||| |||| || |||| AGCTGCAGAT GGAAGCAAAA TTCGTGCCTA TACAAACTCA ATATCGAACC CTGTTGCTAC 543 AATCACATTC CAA 20357 ||||||| || ||| AATCACAATC CAA 556 hqPGS_C08HBa0165B06.1-_SGN-E208913+ (20903 20357) ******************************************************************************** EST sequence 297 +strand 578 n (File: SGN-E244401+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 541 AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT Predicted gene structure (within gDNA segment 21668 to 16875): Exon 1 21005 20431 ( 575 n); cDNA 1 578 ( 578 n); score: 0.806 MATCH C08HBa0165B06.1- SGN-E244401+ 0.806 575 0.995 C PGS_C08HBa0165B06.1-_SGN-E244401+ (21005 20431) Alignment (genomic DNA sequence = upper lines): TGACAGCGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTATTTC 20946 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATGTCCCTT GGTGGAGGTC CAGTCCCTTT CCATAGTGAC AATATTGCTC TCGGGGCATA 20886 || ||| || |||||| || | | |||| | || |||| |||||||| | |||||||| TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 CAGTGCAACA GAAAGAGGGA TTCTTGTAAG TGCCTCTGCT GGAAATAGTG GTCCATCCCT 20826 ||||||||| | |||||| || ||||||| | ||||| || ||||| | | || | || CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 TATCACAGCA GGGAACACCG CCCCTTGGAT TCTTACGGTA GGCGCCAGCA CTACTGATAG 20766 | | ||| || || | | |||||||||| |||||| ||| || ||||||| | |||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GTTACTGTTA CACTTGGAAA TACAGAGGAA TTTGAAGGGG AAGCTTCTTA 20706 |||||||||| | |||||||| |||||||| | ||||||| || ||||| | || || |||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCACAG ATTTCCGACT CAAAATTCTT CACTCTGTAT GATGCTTCAA AAGGTAAAGG 20646 |||||||||| |||||| ||| ||| |||||| |||||| | | |||||| ||| || | | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 TGATCCATCT AAAACCCCTT ACTGCAAACC AGGGTCACTC ACTGACCCTG CAATAAAAGG 20586 |||||||| ||||||||| | |||||||| |||||||||| | | ||||| |||| ||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGTC ATATGT-TAT C--CAGGTGT CGTTTCTAAG GTTGTAAAAG GACAAGCTGT 20529 ||||||||| ||||| || | |||| ||| || | |||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GTATGATTGC CATCAACCTG CCAGAAGATG GTGTCACAAA 20469 |||||||||| |||||||||| | ||||||| |||||| || || ||| ||||||| || GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 540 ATCAGCTGAT GCTCATGTTC TTCCAGCTTT GGAGGTTT 20431 | |||||||| |||||||||| ||||||| || ||| ||| AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT 578 hqPGS_C08HBa0165B06.1-_SGN-E244401+ (21005 20431) ******************************************************************************** EST sequence 306 +strand 560 n (File: SGN-E244422+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 541 AACAGCTGAT GCTCATGTTC Predicted gene structure (within gDNA segment 21668 to 17055): Exon 1 21005 20449 ( 557 n); cDNA 1 560 ( 560 n); score: 0.803 MATCH C08HBa0165B06.1- SGN-E244422+ 0.803 557 0.995 C PGS_C08HBa0165B06.1-_SGN-E244422+ (21005 20449) Alignment (genomic DNA sequence = upper lines): TGACAGCGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTATTTC 20946 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATGTCCCTT GGTGGAGGTC CAGTCCCTTT CCATAGTGAC AATATTGCTC TCGGGGCATA 20886 || ||| || |||||| || | | |||| | || |||| |||||||| | |||||||| TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 CAGTGCAACA GAAAGAGGGA TTCTTGTAAG TGCCTCTGCT GGAAATAGTG GTCCATCCCT 20826 ||||||||| | |||||| || ||||||| | ||||| || ||||| | | || | || CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 TATCACAGCA GGGAACACCG CCCCTTGGAT TCTTACGGTA GGCGCCAGCA CTACTGATAG 20766 | | ||| || || | | |||||||||| |||||| ||| || ||||||| | |||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GTTACTGTTA CACTTGGAAA TACAGAGGAA TTTGAAGGGG AAGCTTCTTA 20706 |||||||||| | |||||||| |||||||| | ||||||| || ||||| | || || |||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCACAG ATTTCCGACT CAAAATTCTT CACTCTGTAT GATGCTTCAA AAGGTAAAGG 20646 |||||||||| |||||| ||| ||| |||||| |||||| | | |||||| ||| || | | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 TGATCCATCT AAAACCCCTT ACTGCAAACC AGGGTCACTC ACTGACCCTG CAATAAAAGG 20586 |||||||| ||||||||| | |||||||| |||||||||| | | ||||| |||| ||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGTC ATATGT-TAT C--CAGGTGT CGTTTCTAAG GTTGTAAAAG GACAAGCTGT 20529 ||||||||| ||||| || | |||| ||| || | |||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GTATGATTGC CATCAACCTG CCAGAAGATG GTGTCACAAA 20469 |||||||||| |||||||||| | ||||||| |||||| || || ||| | ||||| || GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 540 ATCAGCTGAT GCTCATGTTC 20449 | |||||||| |||||||||| AACAGCTGAT GCTCATGTTC 560 hqPGS_C08HBa0165B06.1-_SGN-E244422+ (21005 20449) ******************************************************************************** EST sequence 183 +strand 779 n (File: SGN-E539488+) 1 TTGAAAATTC TTCTTATCTT CATATTTTGC TCTTTCCTAA GGCCTAGTAT TCAGAGTGAT 61 CTCGAGACTT ATATAGTCCA TGTTGAATCA CCTGAAAACC AAATTTCTAC TCAATCATCA 121 TTAACGGATT TAGAGAGCTA TTACCTTTCT TTTTTGCCTA AAACTACTAC CGCAATTAGC 181 TCGAGTGGAG ATGAAGAGGC TGCTAGCATG ATCTACTCCT ACCACAATGT GATGAAAGGT 241 TTTGCAGCAA GATTAACTGC AGCACAAGTG AAGGAAATGG AGAAAAAACA CGGCTTTGTC 301 TCTGCTCAGA AACAGAGGAT TTTCTCCTTG CATACTACTC ATACTCCAAG TTTTCTTGGT 361 TTGCAACAGA ACATGGGCTT GTGGAAAGAT TCCAATTTTG GAGTAGGTGT GATCATCGGA 421 GTTCTAGACA CTGGAATTCT TCCTGATCAT CCTTCATTTA GTGATGTTGG GATGCCTCCC 481 CCGCCTGCTA AGTGGAAAGG AGTTTGTGAG TCCAATTTCA CCACAAAGTG TAACAACAAG 541 CTCATTGGAG CCAGGTCTTA TCAACTTGGC AATGGTTCCC CGATAGATGA TAATGGACAT 601 GGTACACATA CAGCAGGCAC AGCTGCTGGA GCCTTTGTGA AAGGTGCTAA TATATTTGGG 661 AATGCTAATG GTACTGCTGT TGGTGTTGCC CCTCTAGCCC ACATAGCGGT ATATAAGGTA 721 TGTAGTTCTG ATGGCGGNTG TTCTGACAGC GATATTTTAG CTGCCATGGA TGCAGCTAT Predicted gene structure (within gDNA segment 25984 to 17525): Exon 1 21553 20970 ( 584 n); cDNA 196 779 ( 584 n); score: 0.825 MATCH C08HBa0165B06.1- SGN-E539488+ 0.825 584 0.750 C PGS_C08HBa0165B06.1-_SGN-E539488+ (21553 20970) Alignment (genomic DNA sequence = upper lines): GAGGCACCAC GTTTGATATA TTCCTATCGA AATGTCTTAA CAGGCTTTGC AGCTAAGTTA 21494 ||||| | | |||| || ||||| | ||||| | | ||| ||||| ||| | ||| GAGGCTGCTA GCATGATCTA CTCCTACCAC AATGTGATGA AAGGTTTTGC AGCAAGATTA 255 TCAGAAGAAG ATATAAAGGA AATGGAAAAA AAGGAAGGAT TTGTTTCTGC ACGCCCCCAG 21434 | | || | | | ||||| |||||| ||| || | || | |||| ||||| | ||| ACTGCAGCAC AAGTGAAGGA AATGGAGAAA AAACACGGCT TTGTCTCTGC TCAGAAACAG 315 CAGTTTGTTA GTTTACACAC CACACATAGT GTCAATTTCT TGGGATTGCA ACAGAACATG 21374 | || | || || || || |||| | | ||| | || ||||| |||||||||| AGGATTTTCT CCTTGCATAC TACTCATACT CCAAGTTTTC TTGGTTTGCA ACAGAACATG 375 GGGTTCTGGA AAGACTCTAA TTATGGGAAA GGTGTGATCA TCGGAGTTCT AGACACTGGA 21314 || || |||| |||| || || || ||| | |||||||||| |||||||||| |||||||||| GGCTTGTGGA AAGATTCCAA TTTTGGAGTA GGTGTGATCA TCGGAGTTCT AGACACTGGA 435 ATTCTTCCTG ACCATCCTTC ATTTAGTGAC GTTGGGATGC CTACCCCACC TGCTAAGTGG 21254 |||||||||| | |||||||| ||||||||| |||||||||| || |||| || |||||||||| ATTCTTCCTG ATCATCCTTC ATTTAGTGAT GTTGGGATGC CTCCCCCGCC TGCTAAGTGG 495 AAAGGAGTTT GTGAGTCAAA TTTTATGAAC AAGTGTAACA AAAAGCTCAT TGGAGCGAGG 21194 |||||||||| ||||||| || ||| | | |||||||||| | |||||||| |||||| ||| AAAGGAGTTT GTGAGTCCAA TTTCACCACA AAGTGTAACA ACAAGCTCAT TGGAGCCAGG 555 TCTTACCAAC TTGGCAATGG TTCCCCGATA GATGGTAATG GACACGGTAC ACACACAGCA 21134 ||||| |||| |||||||||| |||||||||| |||| ||||| |||| ||||| ||| |||||| TCTTATCAAC TTGGCAATGG TTCCCCGATA GATGATAATG GACATGGTAC ACATACAGCA 615 AGCACAGCTG CAGGAGCCTT TGTGAAAGGT GCTAATGTAT ATGGCAATGC TAATGGAACT 21074 ||||||||| | |||||||| |||||||||| |||||| ||| ||| ||||| |||||| ||| GGCACAGCTG CTGGAGCCTT TGTGAAAGGT GCTAATATAT TTGGGAATGC TAATGGTACT 675 GCAGTTGGTG TTGCACCTCT TGCCCATATA GCCATATATA AGGTATGTGG TTCCGATGGC 21014 || ||||||| |||| ||||| ||||| ||| || |||||| |||||||| | ||| |||||| GCTGTTGGTG TTGCCCCTCT AGCCCACATA GCGGTATATA AGGTATGTAG TTCTGATGGC 735 AAGTGTTCTG ACAGCGATAT TTTAGCTGCC ATGGATTCAG CTAT 20970 ||||||| |||||||||| |||||||||| |||||| ||| |||| GGNTGTTCTG ACAGCGATAT TTTAGCTGCC ATGGATGCAG CTAT 779 hqPGS_C08HBa0165B06.1-_SGN-E539488+ (21553 20970) ******************************************************************************** EST sequence 43 -strand 799 n (File: SGN-E548357-) 1 GAAGCTCATG TCCTTCCTGC ATTGGATGTT TCAAATGCTG ATGGAAAGAA AATTCTTGCC 61 TATATGAACT CATCTTCAAA TCCGGTTGCT TCAATCACCT TCCATGGAAC TGTAATTGGA 121 GACAAAAATG CTCCTATAGT TGCTTCATTT TCCTCACGAG GACCAAGCGT AGCAAGTCCT 181 GGCATCTTAA AACCTGACAT AATCGGTCCT GGTGTTAACG TCCTTGCTGC TTGGCCTACC 241 TCCGTGGATA ACAACAAAAA CACAAAATCA ACATTCCTTA TTTATGTGGT TTGAACTACA 301 CAAATCGGGA GGTAGGTAAA GTGTTACAAC GCAAGGTGAA TTGCTCGGAG GTAAAACGTA 361 TCCCTGAAGG GCAACTAAAT TATCCTTCAT TTTCCATCAG ACTTGGATCA ACTCCTCAGA 421 CATATACCAG AACCGTAACC AATGTTGGTG ATGCTAAATC ATCTTACAAA GTGGAGATAG 481 TTTCACCAAA AGGAGTTGTC GTGAAAGTTG AACCCTCCGC GCTAAATTTC TCAACGTTGA 541 ACCAGAAGTT GACATATCAA GTGATATTTA CCAAGACAAC TAATATCTCA ACTACCAGTG 601 ATGTTGAGGG ATTTTTGAAG TGGAATTCTA ATAGGCACTC TGTAAGAAGT CCAATTGCAG 661 TTAGAGTGTC TGCTGAATAA AACTAAAATG CTTTCAATCT AAAATGTAAA AATAAGTGCA 721 GAAATTATTC ACAATTAATC ATATTGGATT GCTGTTTTTT TTTCCAGTAA AAAAAAAAAA 781 AAAAAACTCG AGGGGGGCC Predicted gene structure (within gDNA segment 29887 to 24677): Exon 1 27576 27301 ( 276 n); cDNA 1 276 ( 276 n); score: 0.841 Intron 1 27300 27036 ( 265 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.86) Exon 2 27035 26612 ( 424 n); cDNA 277 692 ( 416 n); score: 0.827 Intron 2 26611 25713 ( 899 n); Pd: 0.709 (s: 0.70), Pa: 0.000 (s: 0) Exon 3 25712 25693 ( 20 n); cDNA 693 712 ( 20 n); score: 0.700 PPA cDNA 769 787 MATCH C08HBa0165B06.1- SGN-E548357- 0.832 720 0.901 C PGS_C08HBa0165B06.1-_SGN-E548357- (27576 27301,27035 26612,25712 25693) Alignment (genomic DNA sequence = upper lines): GATGCTCATG TTCTTCCAGC AATGGATGTT TCAGCTGCAG ATGGAACAAA AATCATTTCC 27517 || ||||||| | ||||| || | |||||||| ||| ||| | |||||| || ||| || || GAAGCTCATG TCCTTCCTGC ATTGGATGTT TCAAATGCTG ATGGAAAGAA AATTCTTGCC 60 TATATGCACT CAACATCAAA CCCTATTGCT AGAATCACAT TCCATGGAAC AGTAATTGGA 27457 |||||| ||| || | ||||| || ||||| |||||| | |||||||||| ||||||||| TATATGAACT CATCTTCAAA TCCGGTTGCT TCAATCACCT TCCATGGAAC TGTAATTGGA 120 GATAAATATG CTCCCATTGT AGCTGCATTT TCTTCTCGCG GACCAAGTGA AGCTAGTCCT 27397 || ||| ||| |||| || || ||| ||||| || || || | ||||||| | ||| |||||| GACAAAAATG CTCCTATAGT TGCTTCATTT TCCTCACGAG GACCAAGCGT AGCAAGTCCT 180 GGAATCTTGA AACCTGACAT AATCGGTCCT GGTGTTAATA TCCTTGCTGC TTGGCCTACC 27337 || ||||| | |||||||||| |||||||||| |||||||| |||||||||| |||||||||| GGCATCTTAA AACCTGACAT AATCGGTCCT GGTGTTAACG TCCTTGCTGC TTGGCCTACC 240 TCTATGGATG GCAACAAAAA CACCAAATCC ACATTCAATA TTATATCAGG CACCTCAATG 27277 || ||||| ||||||||| ||| ||||| |||||| TCCGTGGATA ACAACAAAAA CACAAAATCA ACATTC.... .......... .......... 276 TCTTGCCCTC ACCTTAGTGG CGTAGCAGCT CTGCTGAAAA GCACACATCC TGATTGGTCT 27217 .......... .......... .......... .......... .......... .......... 276 CCTGCTGCTA TAAAGTCTGC AATCATGACA ACCGCTGACA CGTTAAACCT TGCCAATAGT 27157 .......... .......... .......... .......... .......... .......... 276 CCAATACTAG ACGAAAGACT CCTTTTTGCT GACATCTATG CAATTGGTGC AGGACATGTT 27097 .......... .......... .......... .......... .......... .......... 276 AATCCATCGA GGGCAAATGA TCCAGGACTA GTTTATGATA CTCCATTTGA GGACTATGTA 27037 .......... .......... .......... .......... .......... .......... 276 GCTTATTTGT GTGGTTTGAA CTACACAAAT CCACAGGTAA GTAAACTCTT ACAACGCAAA 26977 ||||||| | |||||||||| |||||||||| | ||||| ||||| | || ||||||||| .CTTATTTAT GTGGTTTGAA CTACACAAAT CGGGAGGTAG GTAAAGTGTT ACAACGCAAG 335 GTGAATTGCT GGGAGGTTGA AAGTATCCCT GAAGCACAAT TAAACTATCC TTCATTTTCC 26917 |||||||||| |||||| | | |||||||| |||| ||| |||| ||||| |||||||||| GTGAATTGCT CGGAGGTAAA ACGTATCCCT GAAGGGCAAC TAAATTATCC TTCATTTTCC 395 ATATCCGGAC TTGGATCAAC TCCTCAGACA TATACCAGAA CAGTTACCAA CGTTGGTGAC 26857 || | ||| |||||||||| |||||||||| |||||||||| | || ||||| |||||||| --AT-CAGAC TTGGATCAAC TCCTCAGACA TATACCAGAA CCGTAACCAA TGTTGGTGAT 452 GCCGAATCAT CTTACAAAGT GGAGATAGCT TCACCAAAAG GTGTTGTCGT GGAAGTTGAA 26797 || |||||| |||||||||| |||||||| | |||||||||| | |||||||| | |||||||| GCTAAATCAT CTTACAAAGT GGAGATAGTT TCACCAAAAG GAGTTGTCGT GAAAGTTGAA 512 CCCTCCGAGC TGAATTTCTC CGAGTTGAAC CAGAAGTTAA CATACCAGGT AACGTTTTCC 26737 ||||||| || | |||||||| ||||||| |||||||| | |||| || || | ||| || CCCTCCGCGC TAAATTTCTC AACGTTGAAC CAGAAGTTGA CATATCAAGT GATATTTACC 572 AAGACAATCA GCAGCTC-AC AGCCTGAGGT TGTTGAGGGA TTCTTGAAGT GGAATTCTAA 26678 ||||||| | | ||| || || | | |||||||||| || ||||||| |||||||||| AAGACAACTA ATATCTCAAC TACCAG-TGA TGTTGAGGGA TTTTTGAAGT GGAATTCTAA 631 TACGTACTCT GTGAGAAGTC CAATTGCAGT TGTGTTAGTA TTGACTACAT AAGTGCAGAA 26618 || | ||||| || ||||||| |||||||||| | | ||| | || || || | || TAGGCACTCT GTAAGAAGTC CAATTGCAGT T-AG--AGTG TCTGCTGAAT AA-AAC-TAA 686 AATGCTGTTT GTTTTCACTG TATACTTTAT TTTACTTTTT CAATCTTTTA TTACTATTTT 26558 |||||| AATGCT.... .......... .......... .......... .......... .......... 692 GATTTTCACT GGTCTTTAAT AATTTTATCA TTATGAAATA TTGTTTCAAT GTTTGTTCAC 26498 .......... .......... .......... .......... .......... .......... 692 AGCTGATTAA ATAATATGAA ACCATTGCTT TTCCTTTATC ATTACATTTT ATATATTTAT 26438 .......... .......... .......... .......... .......... .......... 692 TTTCTTTTCT TTCTTGATTT CATTATGTTC ATAGAAAAAA AAACGACTTT TTGAGATAAT 26378 .......... .......... .......... .......... .......... .......... 692 AAACATAAGG TGAGTGACCA TGTGAGAATT TTTGTTATTA CTCGAATCTG AGAAATTTGT 26318 .......... .......... .......... .......... .......... .......... 692 TGTTAGTTAC CTAATAATGT AGCCTTTAAT CATGACTCCG AATCTTGATT GTGACATACT 26258 .......... .......... .......... .......... .......... .......... 692 TACTTCTATT TTTCTTATAT GAATAACTTG ATTAAAATGT AATTATCTTC GAGAATAAAA 26198 .......... .......... .......... .......... .......... .......... 692 AGTTTGTTAT GTTTAATACC TTTAGTTTGA CCGGTATCGA TCTTAATTGT AGTTTCTTTT 26138 .......... .......... .......... .......... .......... .......... 692 CATTAGCAAA TTGCCTAACG CTCTTTTTTT TTTTTTTTTT TTTGTGAACA ATGTATCTTA 26078 .......... .......... .......... .......... .......... .......... 692 TTGTTGTGAT ATTATTAACC ATGTGATTTA TTTGAAGTGT TTTATTGATC CCTGGTAAAG 26018 .......... .......... .......... .......... .......... .......... 692 ATTAGTTGTT TTATTTTATT TATTATAATA AAGTTTCTAA TTGATTAAGT TATTATGTTT 25958 .......... .......... .......... .......... .......... .......... 692 ATATGTGACT CCTTTGTTTA GTAAATGATT TTGTGTATGA AGTTATTTAA TTCATACACA 25898 .......... .......... .......... .......... .......... .......... 692 GAATATTAAA ATTGTCGGTT CTTGTAAGTT ACTATCATTG TTCACAATCA AAGATGAGGT 25838 .......... .......... .......... .......... .......... .......... 692 AGGACAGAAT ATTGATGCTT GTATCACAAG ATTAAAAATA ATTCGATCTT AATTATGAGT 25778 .......... .......... .......... .......... .......... .......... 692 AATTCTAACT TCTTGTATTA GTACATTTTT TTATGTATTA AATGAACCAA ATAGTGATAT 25718 .......... .......... .......... .......... .......... .......... 692 TATTTTTTAT TCTAATATTA ATAAA 25693 || | ||||| || | ||| .....TTCAA TCTAAAATGT AAAAA 712 hqPGS_C08HBa0165B06.1-_SGN-E548357- (27576 27301,27035 26612) ******************************************************************************** EST sequence 136 -strand 450 n (File: SGN-E237320-) 1 GGTAAAACGT ATCCCTAAGG GCAACTAAAT TATCCTTCAT TTTCCATCAG ACTTGGATCA 61 ACTCCTCAGA CATATACCAG AACCGTAACC AATGTTGGTG ATGCTAAATC ATCTTACAAA 121 GTGGAGATAG TTTCACCAAA AGGAGTTGTC GTGAAAGTTG AACCCTCCGC GCTAAATTTC 181 TCAACGTTGA ACCAGAAGTT GACATATCAA GTGATATTTA CCAAGACAAC TAATATCTCA 241 ACTACCAGTG ATGTTGAGGG ATTTTTGAAG TGGAATTCTA ATAGGCACTC TGTAAGAAGT 301 CCAATTGCAG TTAGAGTGTC TGCTGAATAA AACTAAAATG CTTTCAATCT AAAATGTAAA 361 AATAAGTGCA GAAATTATTC ACAATTAATC ATATTGGATT GCTGTTTTTT TTTTCCAGTA 421 TATGTTTTAT GTCAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 28009 to 24667): Exon 1 26962 26612 ( 351 n); cDNA 1 342 ( 342 n); score: 0.813 Intron 1 26611 25713 ( 899 n); Pd: 0.709 (s: 0.70), Pa: 0.000 (s: 0) Exon 2 25712 25693 ( 20 n); cDNA 343 362 ( 20 n); score: 0.700 PPA cDNA 434 450 MATCH C08HBa0165B06.1- SGN-E237320- 0.813 371 0.824 C PGS_C08HBa0165B06.1-_SGN-E237320- (26962 26612,25712 25693) Alignment (genomic DNA sequence = upper lines): GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTCA TTTTCCATAT CCGGACTTGG 26903 ||| || || |||||| ||| ||| |||| ||||||||| ||||||| | | ||||||| GGTAAAACGT ATCCCT-AAG GGCAACTAAA TTATCCTTCA TTTTCCA--T -CAGACTTGG 56 ATCAACTCCT CAGACATATA CCAGAACAGT TACCAACGTT GGTGACGCCG AATCATCTTA 26843 |||||||||| |||||||||| ||||||| || ||||| ||| ||||| || |||||||||| ATCAACTCCT CAGACATATA CCAGAACCGT AACCAATGTT GGTGATGCTA AATCATCTTA 116 CAAAGTGGAG ATAGCTTCAC CAAAAGGTGT TGTCGTGGAA GTTGAACCCT CCGAGCTGAA 26783 |||||||||| |||| ||||| ||||||| || ||||||| || |||||||||| ||| ||| || CAAAGTGGAG ATAGTTTCAC CAAAAGGAGT TGTCGTGAAA GTTGAACCCT CCGCGCTAAA 176 TTTCTCCGAG TTGAACCAGA AGTTAACATA CCAGGTAACG TTTTCCAAGA CAATCAGCAG 26723 |||||| | |||||||||| |||| ||||| || || | ||| |||||| ||| | | TTTCTCAACG TTGAACCAGA AGTTGACATA TCAAGTGATA TTTACCAAGA CAACTAATAT 236 CTC-ACAGCC TGAGGTTGTT GAGGGATTCT TGAAGTGGAA TTCTAATACG TACTCTGTGA 26664 ||| || || | | |||| |||||||| | |||||||||| |||||||| | ||||||| | CTCAACTACC AG-TGATGTT GAGGGATTTT TGAAGTGGAA TTCTAATAGG CACTCTGTAA 295 GAAGTCCAAT TGCAGTTGTG TTAGTATTGA CTACATAAGT GCAGAAAATG CTGTTTGTTT 26604 |||||||||| ||||||| | ||| | || |||| | |||||| || GAAGTCCAAT TGCAGTT-AG --AGTGTCTG CTGAATAA-A AC-TAAAATG CT........ 342 TCACTGTATA CTTTATTTTA CTTTTTCAAT CTTTTATTAC TATTTTGATT TTCACTGGTC 26544 .......... .......... .......... .......... .......... .......... 342 TTTAATAATT TTATCATTAT GAAATATTGT TTCAATGTTT GTTCACAGCT GATTAAATAA 26484 .......... .......... .......... .......... .......... .......... 342 TATGAAACCA TTGCTTTTCC TTTATCATTA CATTTTATAT ATTTATTTTC TTTTCTTTCT 26424 .......... .......... .......... .......... .......... .......... 342 TGATTTCATT ATGTTCATAG AAAAAAAAAC GACTTTTTGA GATAATAAAC ATAAGGTGAG 26364 .......... .......... .......... .......... .......... .......... 342 TGACCATGTG AGAATTTTTG TTATTACTCG AATCTGAGAA ATTTGTTGTT AGTTACCTAA 26304 .......... .......... .......... .......... .......... .......... 342 TAATGTAGCC TTTAATCATG ACTCCGAATC TTGATTGTGA CATACTTACT TCTATTTTTC 26244 .......... .......... .......... .......... .......... .......... 342 TTATATGAAT AACTTGATTA AAATGTAATT ATCTTCGAGA ATAAAAAGTT TGTTATGTTT 26184 .......... .......... .......... .......... .......... .......... 342 AATACCTTTA GTTTGACCGG TATCGATCTT AATTGTAGTT TCTTTTCATT AGCAAATTGC 26124 .......... .......... .......... .......... .......... .......... 342 CTAACGCTCT TTTTTTTTTT TTTTTTTTTG TGAACAATGT ATCTTATTGT TGTGATATTA 26064 .......... .......... .......... .......... .......... .......... 342 TTAACCATGT GATTTATTTG AAGTGTTTTA TTGATCCCTG GTAAAGATTA GTTGTTTTAT 26004 .......... .......... .......... .......... .......... .......... 342 TTTATTTATT ATAATAAAGT TTCTAATTGA TTAAGTTATT ATGTTTATAT GTGACTCCTT 25944 .......... .......... .......... .......... .......... .......... 342 TGTTTAGTAA ATGATTTTGT GTATGAAGTT ATTTAATTCA TACACAGAAT ATTAAAATTG 25884 .......... .......... .......... .......... .......... .......... 342 TCGGTTCTTG TAAGTTACTA TCATTGTTCA CAATCAAAGA TGAGGTAGGA CAGAATATTG 25824 .......... .......... .......... .......... .......... .......... 342 ATGCTTGTAT CACAAGATTA AAAATAATTC GATCTTAATT ATGAGTAATT CTAACTTCTT 25764 .......... .......... .......... .......... .......... .......... 342 GTATTAGTAC ATTTTTTTAT GTATTAAATG AACCAAATAG TGATATTATT TTTTATTCTA 25704 || | |||| .......... .......... .......... .......... .......... .TTCAATCTA 351 ATATTAATAA A 25693 | || | || | AAATGTAAAA A 362 hqPGS_C08HBa0165B06.1-_SGN-E237320- (26962 26612) ******************************************************************************** EST sequence 3 -strand 709 n (File: SGN-E376168-) 1 AGTGACATTT TCCAAGACAA TTAACAGCTC AATGTCTGGG GTTGTTGAGG GATTCTTGAA 61 GTGGAATTCT AACAGGCACT CTGTGAGAAG TCCAATTGCA GTTGTGTTGG CATTGGCTAA 121 GTAAGTGCAC AAAGTATTCA AACATTTGAA AATGCTGTTT GATTACACAA TAAACGTTCT 181 GTTACTTTTT TCATTGTTAA AACAATAAAA CAAAAAAAAA AAAAAAAAAA AGAAAAAGCT 241 TGTACCTCGG CCCCGAGGTA CTATTTGAAC CCGAGACAGC CCGGAGAGTG GGGACTTCCA 301 AAGCATGGCA AGAAAAAGCA TCCTATGGTT TCACTCAGTA TATACTCTAC AAATTAAGTT 361 TCCGTCTCTT CCTCTTGGCA ATTTGCATAT ATCTAGCCTT CAATGTATCG TTGTAGGATA 421 ATAATCATAA CTCATCATGA TCCGAGTTTT CATCTGCAGA TGGCTTCTCT GCCTCTGAAG 481 CTGTTTGTTC TTTCTGGGAG GTACCCTCCT CAGAAGAGGA TTTGGTAGTG TCTGCTTTCT 541 CCTTGCTGTT TTCAGTTTCA TTTTTCAAAG GCTTCTCAAC CTTAGGCTTT GGCTTTGGTA 601 TTTTATTTAC CTTGTTAACC TTGTCTTGAA GATCAAAAAC CTTTACATAT ACTTCTTCAG 661 AAGTAAATGC AGGCTTGTCG GATCCAGGAG TGTTTTTCTG ACCTGCCCG Predicted gene structure (within gDNA segment 27710 to 20032): Exon 1 26748 26612 ( 137 n); cDNA 2 137 ( 136 n); score: 0.854 Intron 1 26611 26337 ( 275 n); Pd: 0.709 (s: 0.82), Pa: 0.000 (s: 0) Exon 2 26336 26300 ( 37 n); cDNA 138 174 ( 37 n); score: 0.608 Intron 2 26299 24147 (2153 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.64) Exon 3 24146 24072 ( 75 n); cDNA 175 246 ( 72 n); score: 0.627 MATCH C08HBa0165B06.1- SGN-E376168- 0.774 249 0.351 C PGS_C08HBa0165B06.1-_SGN-E376168- (26748 26612,26336 26300,24146 24072) Alignment (genomic DNA sequence = upper lines): GTAACGTTTT CCAAGACAAT CAGCAGCTCA CAGCCTGAGG TTGTTGAGGG ATTCTTGAAG 26689 || || |||| |||||||||| | ||||||| | ||| || |||||||||| |||||||||| GTGACATTTT CCAAGACAAT TAACAGCTCA ATGTCTGGGG TTGTTGAGGG ATTCTTGAAG 61 TGGAATTCTA ATACGTACTC TGTGAGAAGT CCAATTGCAG TTGTGTTAGT ATTGACTACA 26629 |||||||||| | | | |||| |||||||||| |||||||||| ||||||| | |||| ||| TGGAATTCTA ACAGGCACTC TGTGAGAAGT CCAATTGCAG TTGTGTTGGC ATTGGCTAAG 121 TAAGTGCAGA AAATGCTGTT TGTTTTCACT GTATACTTTA TTTTACTTTT TCAATCTTTT 26569 |||||||| | || | | TAAGTGCACA AAGT-AT... .......... .......... .......... .......... 137 ATTACTATTT TGATTTTCAC TGGTCTTTAA TAATTTTATC ATTATGAAAT ATTGTTTCAA 26509 .......... .......... .......... .......... .......... .......... 137 TGTTTGTTCA CAGCTGATTA AATAATATGA AACCATTGCT TTTCCTTTAT CATTACATTT 26449 .......... .......... .......... .......... .......... .......... 137 TATATATTTA TTTTCTTTTC TTTCTTGATT TCATTATGTT CATAGAAAAA AAAACGACTT 26389 .......... .......... .......... .......... .......... .......... 137 TTTGAGATAA TAAACATAAG GTGAGTGACC ATGTGAGAAT TTTTGTTATT ACTCGAATCT 26329 || || | .......... .......... .......... .......... .......... ..TCAAACAT 145 GAGAAATTTG TTGTTAG-TT ACCTAATAAT GTAGCCTTTA ATCATGACTC CGAATCTTGA 26270 |||| || |||| | || || ||||| TTGAAA-ATG CTGTTTGATT ACACAATAAA .......... .......... .......... 174 TTGTGACATA CTTACTTCTA TTTTTCTTAT ATGAATAACT TGATTAAAAT GTAATTATCT 26210 .......... .......... .......... .......... .......... .......... 174 TCGAGAATAA AAAGTTTGTT ATGTTTAATA CCTTTAGTTT GACCGGTATC GATCTTAATT 26150 .......... .......... .......... .......... .......... .......... 174 GTAGTTTCTT TTCATTAGCA AATTGCCTAA CGCTCTTTTT TTTTTTTTTT TTTTTGTGAA 26090 .......... .......... .......... .......... .......... .......... 174 CAATGTATCT TATTGTTGTG ATATTATTAA CCATGTGATT TATTTGAAGT GTTTTATTGA 26030 .......... .......... .......... .......... .......... .......... 174 TCCCTGGTAA AGATTAGTTG TTTTATTTTA TTTATTATAA TAAAGTTTCT AATTGATTAA 25970 .......... .......... .......... .......... .......... .......... 174 GTTATTATGT TTATATGTGA CTCCTTTGTT TAGTAAATGA TTTTGTGTAT GAAGTTATTT 25910 .......... .......... .......... .......... .......... .......... 174 AATTCATACA CAGAATATTA AAATTGTCGG TTCTTGTAAG TTACTATCAT TGTTCACAAT 25850 .......... .......... .......... .......... .......... .......... 174 CAAAGATGAG GTAGGACAGA ATATTGATGC TTGTATCACA AGATTAAAAA TAATTCGATC 25790 .......... .......... .......... .......... .......... .......... 174 TTAATTATGA GTAATTCTAA CTTCTTGTAT TAGTACATTT TTTTATGTAT TAAATGAACC 25730 .......... .......... .......... .......... .......... .......... 174 AAATAGTGAT ATTATTTTTT ATTCTAATAT TAATAAACAA TATCTTTAGT CCATTACATG 25670 .......... .......... .......... .......... .......... .......... 174 AACTGATATT CTTAATTTAA TATAATTATT ATGATCTATG TAGTTTAATT TATTATTTTA 25610 .......... .......... .......... .......... .......... .......... 174 ATCTATTAAA ATGTGAGACT CTATTACGAG TCAATATATT TTTAATAGAT TGAATAATGA 25550 .......... .......... .......... .......... .......... .......... 174 AAAATCACAT AAATAAATAA TAATTGATTA ATATAACCAT GTCTCAAATT TGAGATAGAA 25490 .......... .......... .......... .......... .......... .......... 174 GATACCCCAT TATAATTACT TATAAGTTTT TCATATCAGA CCCAGGATTC GATTTTCATG 25430 .......... .......... .......... .......... .......... .......... 174 TGAGACCCAG GATTCGAGAT AAGAGATAAG TTAAGTATAA AATAGAGGGT TAAACTAGTT 25370 .......... .......... .......... .......... .......... .......... 174 AGTTAATTAA AATTTTTTCT GAAGTTTATT TTAATTGATT AGTATCGATA AATTTAATGT 25310 .......... .......... .......... .......... .......... .......... 174 GGAAAATTAA ATAAATTGTA GTAGTAAATT TCGAAATTAA ATTGCGAAGT ATAATTACAA 25250 .......... .......... .......... .......... .......... .......... 174 ATTTTATTGG TACAAACTGC AATATGTAAT TTTATTAAAA TATGGTTAAT TCATGTTTTT 25190 .......... .......... .......... .......... .......... .......... 174 ATGAACTAAT ATTATAATGG AAATTTACGA TACTAAAATT GTGATTTATG TTGTATTTGA 25130 .......... .......... .......... .......... .......... .......... 174 CTAATTGATA AGTTCAACAA CCATTATGGA ACAAGTATTT CTTTTATTTT TGTCATGAAT 25070 .......... .......... .......... .......... .......... .......... 174 GAATTAATAA CTTTATTTTG TTCAGTGCCG AGTTAACTGA CACAGAAGAT TAATGACAGA 25010 .......... .......... .......... .......... .......... .......... 174 ATCATTTTTT CTTTTCCGAC CTTTTAATTT TTGCCTTGTT CATTCGAATG AAAATCCACG 24950 .......... .......... .......... .......... .......... .......... 174 AAAAATTATA AATTTTCTAA AAACATTTTT ACCAAATCAA CTAGGGAAAC AAAAAAATGG 24890 .......... .......... .......... .......... .......... .......... 174 AGTATGGAGC CTAAAGGGTA CAAAATATTA ATAAAAATTT CAAAATGGTA TATAAAATTT 24830 .......... .......... .......... .......... .......... .......... 174 TATATTAACC AAAACAGTAA AATCGCTGTA TCAACAGCTA TTTACTTCCC CGGAAAAAGC 24770 .......... .......... .......... .......... .......... .......... 174 AAAATCGCTG CTTTTTTTTT TAAAAAAAAA TGAAATCGCT ACCTAGGCAG CGATTTTTAA 24710 .......... .......... .......... .......... .......... .......... 174 AAAAAGATTT TTTTTTTAAA TGGGGAAGTC GCTGCCTGGG CAGCGACTTT TATAAAAAAA 24650 .......... .......... .......... .......... .......... .......... 174 AATATTTTGA AATGTGCAAG TCGCTGCCCA GGCAGAGACT TGTATAATTT TTTTTAAAAA 24590 .......... .......... .......... .......... .......... .......... 174 AATTTTAATT TTTTTTCTTA AAATAAATGT GGAATTTTTT TTAAAAAAAA ATTCTTTTTA 24530 .......... .......... .......... .......... .......... .......... 174 AAGCAGCAAT TTTATAAGAT AAAAAAAAAG TTATAATATC TTTTTTTATA AAATTGCTAC 24470 .......... .......... .......... .......... .......... .......... 174 TTTAAATTTT ATTTTTTTAA AATAATTATT TATGGAAAAT CGCAGCGATT TTCATATTTT 24410 .......... .......... .......... .......... .......... .......... 174 AAAAAAAAAT TATAAATTCG CTAACTGATT TACATATTTT TTAAAAAAAA TTATAAATCG 24350 .......... .......... .......... .......... .......... .......... 174 CTGCGTAGGC AGCGATTTAA AAAATTTATA ATTTTTTTTA AAATATGAAA ATCGCTGTGA 24290 .......... .......... .......... .......... .......... .......... 174 TTTTCCAAAA ATATTACCCA ATTTATAAAT TTATAAATTT TTTAAATCGC TGCGATTTTC 24230 .......... .......... .......... .......... .......... .......... 174 CACAAATATT TTTTTTAAAA AAATAAAATT TAAAGTAAAA TTATAAAATT ATTGCTTTAA 24170 .......... .......... .......... .......... .......... .......... 174 AAAGTCTTTT TTTTTAATTT CCACATTGTT TCCACATTTT TTTAAAGAAA AAAAATTAAA 24110 | || | | || |||| || | | | ||| | |||| .......... .......... ...CGTTCTG T-TAC-TTTT TTCATTGTTA AAACAATAAA 209 AATTTCAAAA AAAATAAAAA ATTATACAAG TCGCTGCC 24072 | |||| |||| ||||| | | | ||| | || ACAAAAAAAA AAAAAAAAAA AAGA-AAAAG CTTGTACC 246 hqPGS_C08HBa0165B06.1-_SGN-E376168- (26748 26612) ******************************************************************************** EST sequence 315 +strand 441 n (File: SGN-E307529+) 1 TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 61 AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 121 TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 181 TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 241 AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 301 CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 361 GAGAAGTCCA ATTGCAGTTG TATTGGTCTA GTGAAAAATT GGCTATATAT ATAAGTGCAT 421 AAAGTACTCG AAAAAAAAAA A Predicted gene structure (within gDNA segment 28399 to 25435): Exon 1 27025 26645 ( 381 n); cDNA 1 381 ( 381 n); score: 0.869 PPA cDNA 431 441 MATCH C08HBa0165B06.1- SGN-E307529+ 0.869 381 0.864 C PGS_C08HBa0165B06.1-_SGN-E307529+ (27025 26645) Alignment (genomic DNA sequence = upper lines): TGGTTTGAAC TACACAAATC CACAGGTAAG TAAACTCTTA CAACGCAAAG TGAATTGCTG 26966 |||||||| ||||||||| |||||||||| |||||| ||| |||||||| | | ||||||| TGGTTTGAGG TACACAAATG CACAGGTAAG TAAACTGTTA CAACGCAAGG TAAATTGCTT 60 GGAGGTTGAA AGTATCCCTG AAGCACAATT AAACTATCCT TCATTTTCCA TATCCGGACT 26906 || || | |||||||||| ||||| |||| |||||||||| || ||||||| ||| ||||| AGAAGTAAAG AGTATCCCTG AAGCAGAATT AAACTATCCT TCGTTTTCCA TATTTGGACT 120 TGGATCAACT CCTCAGACAT ATACCAGAAC AGTTACCAAC GTTGGTGACG CCGAATCATC 26846 |||||||||| |||||||||| | || ||||| || |||||| |||||||| | | |||||| TGGATCAACT CCTCAGACAT ACACAAGAAC TGTGACCAAC GTTGGTGATG TTGCATCATC 180 TTACAAAGTG GAGATAGCTT CACCAAAAGG TGTTGTCGTG GAAGTTGAAC CCTCCGAGCT 26786 |||||||||| |||||||||| |||| | ||| |||| | | ||||||| || || | || || TTACAAAGTG GAGATAGCTT CACCTATAGG AGTTGCCATA GAAGTTGTAC CCACAGAACT 240 GAATTTCTCC GAGTTGAACC AGAAGTTAAC ATACCAGGTA ACGTTTTCCA AGACAATCAG 26726 ||||||||| ||||||||| |||||||||| |||||| || || ||||||| |||||| ||| AAATTTCTCC AAGTTGAACC AGAAGTTAAC ATACCAAGTG ACATTTTCCA AGACAACCAG 300 CAGCTCACAG CCTGAGGTTG TTGAGGGATT CTTGAAGTGG AATTCTAATA CGTACTCTGT 26666 ||| ||| | || ||||| |||||||||| |||||||||| | ||||| || | ||||||| CAGTTCAGAA GTTGTGGTTG TTGAGGGATT CTTGAAGTGG ACTTCTACTA GGCACTCTGT 360 GAGAAGTCCA ATTGCAGTTG T 26645 |||||||||| |||||||||| | GAGAAGTCCA ATTGCAGTTG T 381 hqPGS_C08HBa0165B06.1-_SGN-E307529+ (27025 26645) ******************************************************************************** EST sequence 339 +strand 574 n (File: SGN-E207413+) 1 GAGAACACAT CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA 61 CACATTAAAC CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA 121 TGCAATAGGT GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA 181 TACCCCATTT GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT 241 AGGTAAATTG TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA 301 ATTAAACTAT CCTTCATTTT GCATATCGAG ACTTGGATCA ACTCCTCAGA CATACACCAG 361 AACTGTGACC AATGTTGGTG ATGCCAAATC ATCTTACACG GTGCAGATAG CTTCACCTAA 421 AGGCGTTGTC GTGAAAGTTA AGCCCAGCAA GCTAAATTTC TCGGAGTTGA ACCAGAAGCT 481 AACATACCAA GTGACATTTT CCAAGACAAT TAACAGCTCA ATGTCTGGGG TTGTTGAGGG 541 ATTCTTGAAG TGGAATTCTA ACAGGCACTC TGTG Predicted gene structure (within gDNA segment 27874 to 25938): Exon 1 27237 26665 ( 573 n); cDNA 2 574 ( 573 n); score: 0.895 MATCH C08HBa0165B06.1- SGN-E207413+ 0.895 573 0.998 C PGS_C08HBa0165B06.1-_SGN-E207413+ (27237 26665) Alignment (genomic DNA sequence = upper lines): AGCACACATC CTGATTGGTC TCCTGCTGCT ATAAAGTCTG CAATCATGAC AACCGCTGAC 27178 || ||||||| |||||||||| |||||||| | || ||||||| |||| ||||| |||||||||| AGAACACATC CTGATTGGTC TCCTGCTGTT ATTAAGTCTG CAATGATGAC AACCGCTGAC 61 ACGTTAAACC TTGCCAATAG TCCAATACTA GACGAAAGAC TCCTTTTTGC TGACATCTAT 27118 || ||||||| |||||| ||| ||||||||| ||| |||| | ||| | ||| ||| |||||| ACATTAAACC TTGCCAGTAG TCCAATACTC GACCAAAGGC TCCGTCCTGC TGATATCTAT 121 GCAATTGGTG CAGGACATGT TAATCCATCG AGGGCAAATG ATCCAGGACT AGTTTATGAT 27058 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATAGGTG CAGGACATGT TAATCCATCG AGGGCAAATG ATCCAGGACT AGTTTATGAT 181 ACTCCATTTG AGGACTATGT AGCTTATTTG TGTGGTTTGA ACTACACAAA TCCACAGGTA 26998 || ||||||| |||| ||||| | ||||||| |||||||||| |||||||||| |||||||||| ACCCCATTTG AGGATTATGT ACCTTATTTA TGTGGTTTGA ACTACACAAA TCCACAGGTA 241 AGTAAACTCT TACAACGCAA AGTGAATTGC TGGGAGGTTG AAAGTATCCC TGAAGCACAA 26938 ||||| | | ||| ||||| ||||||||| | |||||||| |||||||||| |||||||||| GGTAAATTGT TACGACGCAG GGTGAATTGC TCGGAGGTTG AAAGTATCCC TGAAGCACAA 301 TTAAACTATC CTTCATTTTC CATATCCGGA CTTGGATCAA CTCCTCAGAC ATATACCAGA 26878 |||||||||| ||||||||| |||||| || |||||||||| |||||||||| ||| |||||| TTAAACTATC CTTCATTTTG CATATCGAGA CTTGGATCAA CTCCTCAGAC ATACACCAGA 361 ACAGTTACCA ACGTTGGTGA CGCCGAATCA TCTTACAAAG TGGAGATAGC TTCACCAAAA 26818 || || |||| | |||||||| ||| ||||| ||||||| | || ||||||| |||||| ||| ACTGTGACCA ATGTTGGTGA TGCCAAATCA TCTTACACGG TGCAGATAGC TTCACCTAAA 421 GGTGTTGTCG TGGAAGTTGA ACCCTCCGAG CTGAATTTCT CCGAGTTGAA CCAGAAGTTA 26758 || ||||||| || ||||| | ||| | || || ||||||| | |||||||| ||||||| || GGCGTTGTCG TGAAAGTTAA GCCCAGCAAG CTAAATTTCT CGGAGTTGAA CCAGAAGCTA 481 ACATACCAGG TAACGTTTTC CAAGACAATC AGCAGCTCAC AGCCTGAGGT TGTTGAGGGA 26698 |||||||| | | || ||||| ||||||||| | ||||||| | ||| ||| |||||||||| ACATACCAAG TGACATTTTC CAAGACAATT AACAGCTCAA TGTCTGGGGT TGTTGAGGGA 541 TTCTTGAAGT GGAATTCTAA TACGTACTCT GTG 26665 |||||||||| |||||||||| | | ||||| ||| TTCTTGAAGT GGAATTCTAA CAGGCACTCT GTG 574 hqPGS_C08HBa0165B06.1-_SGN-E207413+ (27237 26665) ******************************************************************************** EST sequence 214 +strand 708 n (File: SGN-E213673+) 1 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 61 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 121 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 181 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 241 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 301 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 361 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 421 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 481 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 541 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 601 CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 661 ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAACT Predicted gene structure (within gDNA segment 28182 to 26175): Exon 1 27582 26876 ( 707 n); cDNA 1 707 ( 707 n); score: 0.904 MATCH C08HBa0165B06.1- SGN-E213673+ 0.904 707 0.999 C PGS_C08HBa0165B06.1-_SGN-E213673+ (27582 26876) Alignment (genomic DNA sequence = upper lines): TCAGCTGATG CTCATGTTCT TCCAGCAATG GATGTTTCAG CTGCAGATGG AACAAAAATC 27523 |||||||||| |||||||||| ||||||| || | |||||||| |||||||||| || ||||| TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 60 ATTTCCTATA TGCACTCAAC ATCAAACCCT ATTGCTAGAA TCACATTCCA TGGAACAGTA 27463 | |||||| |||||| ||| |||||| |||||| || ||||| |||| ||||||||| CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 120 ATTGGAGATA AATATGCTCC CATTGTAGCT GCATTTTCTT CTCGCGGACC AAGTGAAGCT 27403 |||||||||| || ||||||| || || ||| |||||||||| |||||||||| |||| || || ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 180 AGTCCTGGAA TCTTGAAACC TGACATAATC GGTCCTGGTG TTAATATCCT TGCTGCTTGG 27343 | |||||| | |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 240 CCTACCTCTA TGGATGGCAA CAAAAACACC AAATCCACAT TCAATATTAT ATCAGGCACC 27283 ||||| ||| |||||| ||| ||| ||||| |||||||||| |||||||||| |||||||||| CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 300 TCAATGTCTT GCCCTCACCT TAGTGGCGTA GCAGCTCTGC TGAAAAGCAC ACATCCTGAT 27223 || ||||||| |||| ||||| |||||| ||| |||||||||| |||| || || |||||||||| TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 360 TGGTCTCCTG CTGCTATAAA GTCTGCAATC ATGACAACCG CTGACACGTT AAACCTTGCC 27163 |||||||||| ||| ||| || ||||||||| |||||||||| ||||||| || |||||||||| TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 420 AATAGTCCAA TACTAGACGA AAGACTCCTT TTTGCTGACA TCTATGCAAT TGGTGCAGGA 27103 | |||||||| |||| ||| | ||| |||| | |||||| | |||||||||| ||||||||| AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 480 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACTCC ATTTGAGGAC 27043 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||||| CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 540 TATGTAGCTT ATTTGTGTGG TTTGAACTAC ACAAATCCAC AGGTAAGTAA ACTCTTACAA 26983 |||||| ||| |||| ||||| |||||||||| |||||||||| ||||| |||| | | |||| | TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGTAGGTAA ATTGTTACGA 600 CGCAAAGTGA ATTGCTGGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTCA 26923 |||| |||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||| CGCAGGGTGA ATTGCTCGGA GGTTGAAAGT ATCCCTGAAG CACAATTAAA CTATCCTTTC 660 TTTTCCATAT CCGGACTTGG ATCAACTCCT CAGACATATA CCAGAAC 26876 ||| ||||| | ||||||| |||||||||| |||||||| | ||||||| ATTTGCATAT CGAGACTTGG ATCAACTCCT CAGACATACA CCAGAAC 707 hqPGS_C08HBa0165B06.1-_SGN-E213673+ (27582 26876) ******************************************************************************** EST sequence 175 +strand 634 n (File: SGN-E213088+) 1 AAAATTCGTG CCTATACAAA CTCAATATCG AACCCTGTTG CTACAATCAC AATCCAAGGA 61 ACAGTAATTG GAGATAAAAA TGCTCCAATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 121 AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 181 GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 241 GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGGGTAGCAG CTCTGCTGAA GAGAACACAT 301 CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA CACATTAAAC 361 CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA TGCAATAGGT 421 GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACCCCATTT 481 GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT AGGTAAATTG 541 TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 601 CCTTCATTTT GCATATCGAG ACTTGGATCA ACTC Predicted gene structure (within gDNA segment 28641 to 26069): Exon 1 27528 26895 ( 634 n); cDNA 1 634 ( 634 n); score: 0.905 MATCH C08HBa0165B06.1- SGN-E213088+ 0.905 634 1.000 C PGS_C08HBa0165B06.1-_SGN-E213088+ (27528 26895) Alignment (genomic DNA sequence = upper lines): AAAATCATTT CCTATATGCA CTCAACATCA AACCCTATTG CTAGAATCAC ATTCCATGGA 27469 ||||| | |||||| | ||||| ||| |||||| ||| ||| |||||| | |||| ||| AAAATTCGTG CCTATACAAA CTCAATATCG AACCCTGTTG CTACAATCAC AATCCAAGGA 60 ACAGTAATTG GAGATAAATA TGCTCCCATT GTAGCTGCAT TTTCTTCTCG CGGACCAAGT 27409 |||||||||| |||||||| | |||||| || || ||||||| |||||||||| |||||||||| ACAGTAATTG GAGATAAAAA TGCTCCAATA GTTGCTGCAT TTTCTTCTCG CGGACCAAGT 120 GAAGCTAGTC CTGGAATCTT GAAACCTGAC ATAATCGGTC CTGGTGTTAA TATCCTTGCT 27349 || ||| || |||| ||||| |||||||||| ||||| |||| |||||||||| |||||| ||| AAACCTAATC CTGGGATCTT GAAACCTGAC ATAATTGGTC CTGGTGTTAA TATCCTCGCT 180 GCTTGGCCTA CCTCTATGGA TGGCAACAAA AACACCAAAT CCACATTCAA TATTATATCA 27289 |||||||||| | ||| |||| || |||||| ||||||||| |||||||||| |||||||||| GCTTGGCCTA CTTCTGTGGA TGACAACAAG GACACCAAAT CCACATTCAA TATTATATCA 240 GGCACCTCAA TGTCTTGCCC TCACCTTAGT GGCGTAGCAG CTCTGCTGAA AAGCACACAT 27229 |||||||| | |||||||||| ||||||||| || ||||||| |||||||||| || |||||| GGCACCTCGA TGTCTTGCCC ACACCTTAGT GGGGTAGCAG CTCTGCTGAA GAGAACACAT 300 CCTGATTGGT CTCCTGCTGC TATAAAGTCT GCAATCATGA CAACCGCTGA CACGTTAAAC 27169 |||||||||| ||||||||| ||| |||||| ||||| |||| |||||||||| ||| |||||| CCTGATTGGT CTCCTGCTGT TATTAAGTCT GCAATGATGA CAACCGCTGA CACATTAAAC 360 CTTGCCAATA GTCCAATACT AGACGAAAGA CTCCTTTTTG CTGACATCTA TGCAATTGGT 27109 ||||||| || |||||||||| ||| |||| |||| | || |||| ||||| |||||| ||| CTTGCCAGTA GTCCAATACT CGACCAAAGG CTCCGTCCTG CTGATATCTA TGCAATAGGT 420 GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACTCCATTT 27049 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GCAGGACATG TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACCCCATTT 480 GAGGACTATG TAGCTTATTT GTGTGGTTTG AACTACACAA ATCCACAGGT AAGTAAACTC 26989 ||||| |||| || ||||||| ||||||||| |||||||||| |||||||||| | ||||| | GAGGATTATG TACCTTATTT ATGTGGTTTG AACTACACAA ATCCACAGGT AGGTAAATTG 540 TTACAACGCA AAGTGAATTG CTGGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 26929 |||| ||||| |||||||| || ||||||| |||||||||| |||||||||| |||||||||| TTACGACGCA GGGTGAATTG CTCGGAGGTT GAAAGTATCC CTGAAGCACA ATTAAACTAT 600 CCTTCATTTT CCATATCCGG ACTTGGATCA ACTC 26895 |||||||||| |||||| | |||||||||| |||| CCTTCATTTT GCATATCGAG ACTTGGATCA ACTC 634 hqPGS_C08HBa0165B06.1-_SGN-E213088+ (27528 26895) ******************************************************************************** EST sequence 193 +strand 704 n (File: SGN-E212584+) 1 AAGATAGTAT TATGTTTAGC ATTCGGCGGT GTAGCCAATG TTGATAAAGG ACAAGCTGTG 61 AAGGATGCTG GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA 121 TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 181 CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 241 ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 301 AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 361 CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 421 TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 481 TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 541 AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 601 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 661 TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGT Predicted gene structure (within gDNA segment 28707 to 25876): Exon 1 27702 26999 ( 704 n); cDNA 1 704 ( 704 n); score: 0.891 MATCH C08HBa0165B06.1- SGN-E212584+ 0.891 704 1.000 C PGS_C08HBa0165B06.1-_SGN-E212584+ (27702 26999) Alignment (genomic DNA sequence = upper lines): AAGATAGTAT TATGTCTACA AGATGATATT GTTTCCAATA TTGAAAAAGG ACAAGCTGTG 27643 |||||||||| ||||| || | | | || ||||| |||| ||||| |||||||||| AAGATAGTAT TATGTTTAGC ATTCGGCGGT GTAGCCAATG TTGATAAAGG ACAAGCTGTG 60 AAGGATGCTG GAGGTGTTGG CATGATTATC ATCAACCAGC CAAGTTACGG TGCCACTAAA 27583 |||||||||| |||||||||| ||||||| || ||||||| || || || || ||||||| AAGGATGCTG GAGGTGTTGG CATGATTGTC ATCAACCCAT CACAATATGG TGTCACTAAA 120 TCAGCTGATG CTCATGTTCT TCCAGCAATG GATGTTTCAG CTGCAGATGG AACAAAAATC 27523 |||||||||| |||||||||| ||||||| || | |||||||| |||||||||| || ||||| TCAGCTGATG CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGATGG AAGCAAAATT 180 ATTTCCTATA TGCACTCAAC ATCAAACCCT ATTGCTAGAA TCACATTCCA TGGAACAGTA 27463 | |||||| |||||| ||| |||||| |||||| || ||||| |||| ||||||||| CGTGCCTATA CAAACTCAAT ATCGAACCCT GTTGCTACAA TCACAATCCA AGGAACAGTA 240 ATTGGAGATA AATATGCTCC CATTGTAGCT GCATTTTCTT CTCGCGGACC AAGTGAAGCT 27403 |||||||||| || ||||||| || || ||| |||||||||| |||||||||| |||| || || ATTGGAGATA AAAATGCTCC AATAGTTGCT GCATTTTCTT CTCGCGGACC AAGTAAACCT 300 AGTCCTGGAA TCTTGAAACC TGACATAATC GGTCCTGGTG TTAATATCCT TGCTGCTTGG 27343 | |||||| | |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| AATCCTGGGA TCTTGAAACC TGACATAATT GGTCCTGGTG TTAATATCCT CGCTGCTTGG 360 CCTACCTCTA TGGATGGCAA CAAAAACACC AAATCCACAT TCAATATTAT ATCAGGCACC 27283 ||||| ||| |||||| ||| ||| ||||| |||||||||| |||||||||| |||||||||| CCTACTTCTG TGGATGACAA CAAGGACACC AAATCCACAT TCAATATTAT ATCAGGCACC 420 TCAATGTCTT GCCCTCACCT TAGTGGCGTA GCAGCTCTGC TGAAAAGCAC ACATCCTGAT 27223 || ||||||| |||| ||||| |||||| ||| |||||||||| |||| || || |||||||||| TCGATGTCTT GCCCACACCT TAGTGGGGTA GCAGCTCTGC TGAAGAGAAC ACATCCTGAT 480 TGGTCTCCTG CTGCTATAAA GTCTGCAATC ATGACAACCG CTGACACGTT AAACCTTGCC 27163 |||||||||| ||| ||| || ||||||||| |||||||||| ||||||| || |||||||||| TGGTCTCCTG CTGTTATTAA GTCTGCAATG ATGACAACCG CTGACACATT AAACCTTGCC 540 AATAGTCCAA TACTAGACGA AAGACTCCTT TTTGCTGACA TCTATGCAAT TGGTGCAGGA 27103 | |||||||| |||| ||| | ||| |||| | |||||| | |||||||||| ||||||||| AGTAGTCCAA TACTCGACCA AAGGCTCCGT CCTGCTGATA TCTATGCAAT AGGTGCAGGA 600 CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACTCC ATTTGAGGAC 27043 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||||| CATGTTAATC CATCGAGGGC AAATGATCCA GGACTAGTTT ATGATACCCC ATTTGAGGAT 660 TATGTAGCTT ATTTGTGTGG TTTGAACTAC ACAAATCCAC AGGT 26999 |||||| ||| |||| ||||| |||||||||| |||||||||| |||| TATGTACCTT ATTTATGTGG TTTGAACTAC ACAAATCCAC AGGT 704 hqPGS_C08HBa0165B06.1-_SGN-E212584+ (27702 26999) ******************************************************************************** EST sequence 242 +strand 592 n (File: SGN-E329031+) 1 ATTCTCATCA ATGAACAAGA AGAGGGTGTG ACTAAATCAG CTGAAGCTCA TGTCCTTCCT 61 GCATTGGATG TTTCAAATGC TGATGGAAAG AAAATTCTTG CCTATATGAA CTCATCTTCA 121 AATCCGGTTG CTTCAATCAC CTTCCATGGA ACTGTAATTG GAGACAAAAA TGCTCCTATA 181 GTTGCTTCAT TTTCCTCACG AGGACCAAGC GTAGCAAGTC CTGGCATCTT AAAACCTGAC 241 ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA CCTCCGTGGA TAACAACAAA 301 AACACAAAAT CAACATTCAA TATAGTATCC GGAACCTCAA TGTCTTGCCC TCACCTTAGT 361 GGTGTTGCAG CTCTGCTGAA GAGCGCACAT CCTGATTGGT CTCCTGCAGC TATTAAGTCA 421 GCAATGATGA CAACAGCTGA CACAGTAAAC CTCGCCAACA GTCCAATACT GGACGAAAGG 481 CTCATTTCTG CTGATCTCTT TGCAATGGGT GCAGGACATG TTAATCCATC GAGAGNCAGT 541 GATCCAGGAC TAGTTTATGA TACACCATTC GAAGACTACA TTCCTTATTT AT Predicted gene structure (within gDNA segment 30297 to 26156): Exon 1 27618 27029 ( 590 n); cDNA 1 590 ( 590 n); score: 0.844 MATCH C08HBa0165B06.1- SGN-E329031+ 0.844 590 0.997 C PGS_C08HBa0165B06.1-_SGN-E329031+ (27618 27029) Alignment (genomic DNA sequence = upper lines): ATTATCATCA ACCAGCCAAG TTACGGTGCC ACTAAATCAG CTGATGCTCA TGTTCTTCCA 27559 ||| |||||| | | | | | |||| |||||||||| |||| ||||| ||| ||||| ATTCTCATCA ATGAACAAGA AGAGGGTGTG ACTAAATCAG CTGAAGCTCA TGTCCTTCCT 60 GCAATGGATG TTTCAGCTGC AGATGGAACA AAAATCATTT CCTATATGCA CTCAACATCA 27499 ||| |||||| ||||| ||| ||||||| ||||| || |||||||| | |||| | ||| GCATTGGATG TTTCAAATGC TGATGGAAAG AAAATTCTTG CCTATATGAA CTCATCTTCA 120 AACCCTATTG CTAGAATCAC ATTCCATGGA ACAGTAATTG GAGATAAATA TGCTCCCATT 27439 || || ||| || |||||| ||||||||| || ||||||| |||| ||| | |||||| || AATCCGGTTG CTTCAATCAC CTTCCATGGA ACTGTAATTG GAGACAAAAA TGCTCCTATA 180 GTAGCTGCAT TTTCTTCTCG CGGACCAAGT GAAGCTAGTC CTGGAATCTT GAAACCTGAC 27379 || ||| ||| |||| || || |||||||| | ||| |||| |||| ||||| ||||||||| GTTGCTTCAT TTTCCTCACG AGGACCAAGC GTAGCAAGTC CTGGCATCTT AAAACCTGAC 240 ATAATCGGTC CTGGTGTTAA TATCCTTGCT GCTTGGCCTA CCTCTATGGA TGGCAACAAA 27319 |||||||||| |||||||||| |||||||| |||||||||| |||| |||| | ||||||| ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA CCTCCGTGGA TAACAACAAA 300 AACACCAAAT CCACATTCAA TATTATATCA GGCACCTCAA TGTCTTGCCC TCACCTTAGT 27259 ||||| |||| | |||||||| ||| |||| || ||||||| |||||||||| |||||||||| AACACAAAAT CAACATTCAA TATAGTATCC GGAACCTCAA TGTCTTGCCC TCACCTTAGT 360 GGCGTAGCAG CTCTGCTGAA AAGCACACAT CCTGATTGGT CTCCTGCTGC TATAAAGTCT 27199 || || |||| |||||||||| ||| ||||| |||||||||| ||||||| || ||| ||||| GGTGTTGCAG CTCTGCTGAA GAGCGCACAT CCTGATTGGT CTCCTGCAGC TATTAAGTCA 420 GCAATCATGA CAACCGCTGA CACGTTAAAC CTTGCCAATA GTCCAATACT AGACGAAAGA 27139 ||||| |||| |||| ||||| ||| ||||| || ||||| | |||||||||| |||||||| GCAATGATGA CAACAGCTGA CACAGTAAAC CTCGCCAACA GTCCAATACT GGACGAAAGG 480 CTCCTTTTTG CTGACATCTA TGCAATTGGT GCAGGACATG TTAATCCATC GAGGGCAAAT 27079 ||| ||| || |||| ||| |||||| ||| |||||||||| |||||||||| ||| | | | CTCATTTCTG CTGATCTCTT TGCAATGGGT GCAGGACATG TTAATCCATC GAGAGNCAGT 540 GATCCAGGAC TAGTTTATGA TACTCCATTT GAGGACTATG TAGCTTATTT 27029 |||||||||| |||||||||| ||| ||||| || ||||| | ||||||| GATCCAGGAC TAGTTTATGA TACACCATTC GAAGACTACA TTCCTTATTT 590 hqPGS_C08HBa0165B06.1-_SGN-E329031+ (27618 27029) ******************************************************************************** EST sequence 412 +strand 409 n (File: SGN-E317658+) 1 GAGACAAAAA TGCTCCTATA GGTGCTTCAT TTACCTGAGG AGGACCAAGC GTAGCAGGTC 61 CTGGCATCTT AAAACCTGAC ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA 121 CCTCCGTGGA TAACAACAAA AACACAAAAT CAACATTCAA TATAGTATCC AGAACCTCAA 181 TGTGTTGCCC TCACCTTAGT GGTGTTGCAG CTCTGCTGAA AAGCGCACAT ACTGATTGGT 241 CTCCTGCAGC TATTAAGTGG GCAATGATGA CAACAGCTGA CACAGTAAAC CTCTCCGACA 301 GTCCAATACT GGACGAAAGG CTCATTTATG CTGATCTCTT TGCAATGGGT GCAGGACATG 361 TTAATCCATC GAGAGCAGGT GATCCAGGAC TAGTTTATGA TACACCATT Predicted gene structure (within gDNA segment 28697 to 26386): Exon 1 27458 27050 ( 409 n); cDNA 1 409 ( 409 n); score: 0.851 MATCH C08HBa0165B06.1- SGN-E317658+ 0.851 409 1.000 C PGS_C08HBa0165B06.1-_SGN-E317658+ (27458 27050) Alignment (genomic DNA sequence = upper lines): GAGATAAATA TGCTCCCATT GTAGCTGCAT TTTCTTCTCG CGGACCAAGT GAAGCTAGTC 27399 |||| ||| | |||||| || | ||| ||| || | | | |||||||| | ||| ||| GAGACAAAAA TGCTCCTATA GGTGCTTCAT TTACCTGAGG AGGACCAAGC GTAGCAGGTC 60 CTGGAATCTT GAAACCTGAC ATAATCGGTC CTGGTGTTAA TATCCTTGCT GCTTGGCCTA 27339 |||| ||||| ||||||||| |||||||||| |||||||||| |||||||| |||||||||| CTGGCATCTT AAAACCTGAC ATAATCGGTC CTGGTGTTAA CGTCCTTGCT GCTTGGCCTA 120 CCTCTATGGA TGGCAACAAA AACACCAAAT CCACATTCAA TATTATATCA GGCACCTCAA 27279 |||| |||| | ||||||| ||||| |||| | |||||||| ||| |||| | ||||||| CCTCCGTGGA TAACAACAAA AACACAAAAT CAACATTCAA TATAGTATCC AGAACCTCAA 180 TGTCTTGCCC TCACCTTAGT GGCGTAGCAG CTCTGCTGAA AAGCACACAT CCTGATTGGT 27219 ||| |||||| |||||||||| || || |||| |||||||||| |||| ||||| ||||||||| TGTGTTGCCC TCACCTTAGT GGTGTTGCAG CTCTGCTGAA AAGCGCACAT ACTGATTGGT 240 CTCCTGCTGC TATAAAGTCT GCAATCATGA CAACCGCTGA CACGTTAAAC CTTGCCAATA 27159 ||||||| || ||| |||| ||||| |||| |||| ||||| ||| ||||| || || | | CTCCTGCAGC TATTAAGTGG GCAATGATGA CAACAGCTGA CACAGTAAAC CTCTCCGACA 300 GTCCAATACT AGACGAAAGA CTCCTTTTTG CTGACATCTA TGCAATTGGT GCAGGACATG 27099 |||||||||| |||||||| ||| ||| || |||| ||| |||||| ||| |||||||||| GTCCAATACT GGACGAAAGG CTCATTTATG CTGATCTCTT TGCAATGGGT GCAGGACATG 360 TTAATCCATC GAGGGCAAAT GATCCAGGAC TAGTTTATGA TACTCCATT 27050 |||||||||| ||| ||| | |||||||||| |||||||||| ||| ||||| TTAATCCATC GAGAGCAGGT GATCCAGGAC TAGTTTATGA TACACCATT 409 hqPGS_C08HBa0165B06.1-_SGN-E317658+ (27458 27050) ******************************************************************************** EST sequence 285 +strand 605 n (File: SGN-E308535+) 1 GACCCTGCAA TAAAAGGAAA GATAGTCATA TGTTATCCAG GTGTCGTTTC TAAGGTTGTA 61 AAAGGACAAG CTGTGAAGGA TGCTGGAGGT GTTGGTATGA TTGCCATCAA CCTGCCAGAA 121 GATGGTGTCA CAAAATCAGC TGATGCTCAT GTTCTTCCAG CTTTGGAGGT TTCAGCTGCA 181 GATGGAATCA GAATTCTTAC TTATACAAAC TCAATATCAA ACCCTACAGC TAAAATCACA 241 TTCCAAGGAA CAATAATTGG AGATGAAAAC GCTCCCATAG TTGCTTCATT TTCTTCTCGC 301 GGACCAAATA AACCTAGTCC TGGCATCTTG AAACCTGACA TAATCGGTCC TGGTGTTAAT 361 ATCCTTGCTG CTTGGCCTAC CTCCGTGGAT GACAACAAAA AAACCAAATC CACATTCAAT 421 ATTATATCAG GCACCTCGAT GTCTTGCCCT CACCTTAGTG GCGTAGCAGC TCTGCTGAAG 481 AGCACACATC CTGATTGGTC TCCTGCTGCT ATTAAGTCTG CAATCATGAC AACCGCTTAC 541 ACTTTAAACC TTGCCAGTAG TCCAATACTA GATGAAAAGT TACTTCCTGC AGACATCTTT 601 GCAAT Predicted gene structure (within gDNA segment 28848 to 25891): Exon 1 27720 27113 ( 608 n); cDNA 1 605 ( 605 n); score: 0.873 MATCH C08HBa0165B06.1- SGN-E308535+ 0.873 608 1.005 C PGS_C08HBa0165B06.1-_SGN-E308535+ (27720 27113) Alignment (genomic DNA sequence = upper lines): GACCCTGCTG TAAGAGGAAA GATAGTATTA TGTCTACAAG ATGATATTGT TTCCAATATT 27661 |||||||| ||| |||||| |||||| || ||| || | | | | || ||| || || GACCCTGCAA TAAAAGGAAA GATAGTCATA TGT-TA-TCC A-GGTGTCGT TTCTAAGGTT 57 GAAAAAGGAC AAGCTGTGAA GGATGCTGGA GGTGTTGGCA TGATTATCAT CAACCAGCCA 27601 | |||||||| |||||||||| |||||||||| |||||||| | ||||| ||| ||||| |||| GTAAAAGGAC AAGCTGTGAA GGATGCTGGA GGTGTTGGTA TGATTGCCAT CAACCTGCCA 117 AGTTACGGTG CCACTAAATC AGCTGATGCT CATGTTCTTC CAGCAATGGA TGTTTCAGCT 27541 | |||| ||| ||||| |||||||||| |||||||||| |||| |||| ||||||||| GAAGATGGTG TCACAAAATC AGCTGATGCT CATGTTCTTC CAGCTTTGGA GGTTTCAGCT 177 GCAGATGGAA CAAAAATCAT TTCCTATATG CACTCAACAT CAAACCCTAT TGCTAGAATC 27481 |||||||||| | ||| | | | |||| |||||| || ||||||||| |||| |||| GCAGATGGAA TCAGAATTCT TACTTATACA AACTCAATAT CAAACCCTAC AGCTAAAATC 237 ACATTCCATG GAACAGTAAT TGGAGATAAA TATGCTCCCA TTGTAGCTGC ATTTTCTTCT 27421 |||||||| | ||||| |||| ||||||| || | ||||||| | || ||| | |||||||||| ACATTCCAAG GAACAATAAT TGGAGATGAA AACGCTCCCA TAGTTGCTTC ATTTTCTTCT 297 CGCGGACCAA GTGAAGCTAG TCCTGGAATC TTGAAACCTG ACATAATCGG TCCTGGTGTT 27361 |||||||||| | || |||| |||||| ||| |||||||||| |||||||||| |||||||||| CGCGGACCAA ATAAACCTAG TCCTGGCATC TTGAAACCTG ACATAATCGG TCCTGGTGTT 357 AATATCCTTG CTGCTTGGCC TACCTCTATG GATGGCAACA AAAACACCAA ATCCACATTC 27301 |||||||||| |||||||||| |||||| || |||| ||||| |||| ||||| |||||||||| AATATCCTTG CTGCTTGGCC TACCTCCGTG GATGACAACA AAAAAACCAA ATCCACATTC 417 AATATTATAT CAGGCACCTC AATGTCTTGC CCTCACCTTA GTGGCGTAGC AGCTCTGCTG 27241 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATATTATAT CAGGCACCTC GATGTCTTGC CCTCACCTTA GTGGCGTAGC AGCTCTGCTG 477 AAAAGCACAC ATCCTGATTG GTCTCCTGCT GCTATAAAGT CTGCAATCAT GACAACCGCT 27181 || ||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| AAGAGCACAC ATCCTGATTG GTCTCCTGCT GCTATTAAGT CTGCAATCAT GACAACCGCT 537 GACACGTTAA ACCTTGCCAA TAGTCCAATA CTAGACGAAA GACTCCTTTT TGCTGACATC 27121 |||| |||| ||||||||| |||||||||| ||||| |||| | ||| ||| |||||| TACACTTTAA ACCTTGCCAG TAGTCCAATA CTAGATGAAA AGTTACTTCC TGCAGACATC 597 TATGCAAT 27113 | |||||| TTTGCAAT 605 hqPGS_C08HBa0165B06.1-_SGN-E308535+ (27720 27113) ******************************************************************************** EST sequence 360 +strand 663 n (File: SGN-E397025+) 1 TTTGAAGGAG AATCTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 61 GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 121 ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 181 GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 241 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 301 GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 361 ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 421 TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGTCCTGGT 481 GCTAATATCC TTGCTGCTTG GCCTACCTCC GTGGATGACA ACAAGAACAC CAAATCCACA 541 TTCAATATCA TATCAGGCAC CTCAATGTCT TGCCCTCACC TTAGTGGCGT AGCAGCTCTG 601 CTGAAATGCA CACATCCTGA TTGGTCTCCT GCTGTTATTA AATCTGCAAT GATGACAACG 661 GCT Predicted gene structure (within gDNA segment 28578 to 19195): Exon 1 27769 27181 ( 589 n); cDNA 75 663 ( 589 n); score: 0.876 MATCH C08HBa0165B06.1- SGN-E397025+ 0.876 589 0.888 C PGS_C08HBa0165B06.1-_SGN-E397025+ (27769 27181) Alignment (genomic DNA sequence = upper lines): TGCAAAAAAT GCAAGTGAAA CTCCTTATTG CAGACCAGGA TCACTAACTG ACCCTGCTGT 27710 ||||||| || || |||| | |||||||| ||||| ||| ||||| |||| |||||||| | TGCAAAAGAT CCATCCGAAA CCCCTTATTG CAGACGAGGT TCACTCACTG ACCCTGCTAT 134 AAGAGGAAAG ATAGTATTAT GTCTACAAGA TGATATTGTT TCCAATATTG AAAAAGGACA 27650 |||||||||| |||||||||| || | | | ||| ||||| ||| | |||||||| AAGAGGAAAG ATAGTATTAT GTTCAGCACT CGGCCATGTA GCCAATGTTG ATAAAGGACA 194 AGCTGTGAAG GATGCTGGAG GTGTTGGCAT GATTATCATC AACCAGCCAA GTTACGGTGC 27590 |||||||||| |||||||||| |||||||||| |||||||||| |||| || || |||| AGCTGTGAAG GATGCTGGAG GTGTTGGCAT GATTATCATC AACCCATCAC AATATGGTGT 254 CACTAAATCA GCTGATGCTC ATGTTCTTCC AGCAATGGAT GTTTCAGCTG CAGATGGAAC 27530 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| |||| ||||| CACTAAATCA GCTGATGCTC ATGTTCTTCC AGCATTGGTT GTTTCAGCTG CAGACGGAAC 314 AAAAATCATT TCCTATATGC ACTCAACATC AAACCCTATT GCTAGAATCA CATTCCATGG 27470 |||||| || | || ||| |||||||||| || |||| || |||| ||| ||||||| || AAAAATTCTT GCTTACATGA ACTCAACATC AAGCCCTGTT GCTACAATTG CATTCCAAGG 374 AACAGTAATT GGAGATAAAT ATGCTCCCAT TGTAGCTGCA TTTTCTTCTC GCGGACCAAG 27410 |||| ||||| ||||| ||| ||||||| || || |||||| ||||| || | |||||||| AACAATAATT GGAGACAAAA ATGCTCCTAT GGTTGCTGCA TTTTCCTCAA GAGGACCAAG 434 TGAAGCTAGT CCTGGAATCT TGAAACCTGA CATAATCGGT CCTGGTGTTA ATATCCTTGC 27350 | ||||||| |||||||||| |||| ||||| |||||||||| ||||||| || |||||||||| TAGAGCTAGT CCTGGAATCT TGAAGCCTGA CATAATCGGT CCTGGTGCTA ATATCCTTGC 494 TGCTTGGCCT ACCTCTATGG ATGGCAACAA AAACACCAAA TCCACATTCA ATATTATATC 27290 |||||||||| ||||| ||| ||| |||||| ||||||||| |||||||||| |||| ||||| TGCTTGGCCT ACCTCCGTGG ATGACAACAA GAACACCAAA TCCACATTCA ATATCATATC 554 AGGCACCTCA ATGTCTTGCC CTCACCTTAG TGGCGTAGCA GCTCTGCTGA AAAGCACACA 27230 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AGGCACCTCA ATGTCTTGCC CTCACCTTAG TGGCGTAGCA GCTCTGCTGA AATGCACACA 614 TCCTGATTGG TCTCCTGCTG CTATAAAGTC TGCAATCATG ACAACCGCT 27181 |||||||||| |||||||||| ||| || || |||||| ||| ||||| ||| TCCTGATTGG TCTCCTGCTG TTATTAAATC TGCAATGATG ACAACGGCT 663 hqPGS_C08HBa0165B06.1-_SGN-E397025+ (27769 27181) ******************************************************************************** EST sequence 166 +strand 617 n (File: SGN-E306389+) 1 ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 61 GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 121 AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 181 GCAATAAAAG GAAAGATAGT CATATGTTAT CCAGGTGTCG TTTCTAAAGT TGTAAAAGGA 241 CAAGCTGTGA AGGATGCTGG AGGTGTTGGT ATGATTGCCA TCAACCTGCC AGAAGATGGT 301 GTCACAAAAT CAGCTGATGC TCATGTTCTT CCAGCTTTGG AGGTTTCAGC TGCAGATGGA 361 ATCAGAATTC TTACTTATAC AAACTCAATA TCAAACCCTA CAGCTAAAAT CACATTCCAA 421 GGAACAATAA TTGGAGATGA AAACGCTCCC ATAGTTGCTT CATTTTCTTC TCGCGGACCA 481 AATAAACCTA GTCCTGGCAT CTTGAAACCT GACATAATCG GTCCTGGTGT TAATATCCTT 541 GCTGCTTGGC CTACCTCCGT GGATGACAAC AAAAAAACCA AATCCACATT CAATATTATA 601 TCANGCACCT CGATGTC Predicted gene structure (within gDNA segment 30588 to 26125): Exon 1 27885 27275 ( 611 n); cDNA 1 617 ( 617 n); score: 0.811 MATCH C08HBa0165B06.1- SGN-E306389+ 0.811 611 0.990 C PGS_C08HBa0165B06.1-_SGN-E306389+ (27885 27275) Alignment (genomic DNA sequence = upper lines): ACACTTGATA GAAAGATAAA AGCTACTGTT AATCTCGGAA ATAGAAAGAA ATATGAAGGA 27826 || ||||| |||||||||| || ||||||| | || |||| ||| | || | || |||||| ACTACTGATA GAAAGATAAA AGTTACTGTT ACACTTGGAA ATACAGAGGA ATTTGAAGGG 60 GAATCAACTT ATCGTCCAAA GATTTCCAGC TCAACATTCT TCACTCTATA TGATGCTGCA 27766 ||| | ||| |||||||| | ||||||| | |||| ||||| ||||||| || ||||||| || GAAGCTTCTT ATCGTCCACA GATTTCCGAC TCAAAATTCT TCACTCTGTA TGATGCTTCA 120 AAA---A-A- -TG---CAAG TGAAACTCCT TATTGCAGAC CAGGATCACT AACTGACCCT 27715 ||| | | || || | |||| ||| || |||| || |||| ||||| ||||||||| AAAGGTAAAG GTGATCCATC TAAAACCCCT TACTGCAAAC CAGGGTCACT CACTGACCCT 180 GCTGTAAGAG GAAAGATAGT ATTATGTCTA CAAGATGATA TTGTTTCCAA TATTGAAAAA 27655 || ||| || |||||||||| ||||| || | | | | ||||| || ||| |||| GCAATAAAAG GAAAGATAGT CATATGT-TA -TCCA-GGTG TCGTTTCTAA AGTTGTAAAA 237 GGACAAGCTG TGAAGGATGC TGGAGGTGTT GGCATGATTA TCATCAACCA GCCAAGTTAC 27595 |||||||||| |||||||||| |||||||||| || |||||| |||||||| |||| | GGACAAGCTG TGAAGGATGC TGGAGGTGTT GGTATGATTG CCATCAACCT GCCAGAAGAT 297 GGTGCCACTA AATCAGCTGA TGCTCATGTT CTTCCAGCAA TGGATGTTTC AGCTGCAGAT 27535 |||| ||| | |||||||||| |||||||||| |||||||| |||| ||||| |||||||||| GGTGTCACAA AATCAGCTGA TGCTCATGTT CTTCCAGCTT TGGAGGTTTC AGCTGCAGAT 357 GGAACAAAAA TCATTTCCTA TATGCACTCA ACATCAAACC CTATTGCTAG AATCACATTC 27475 |||| | || | || | || || ||||| | |||||||| ||| |||| |||||||||| GGAATCAGAA TTCTTACTTA TACAAACTCA ATATCAAACC CTACAGCTAA AATCACATTC 417 CATGGAACAG TAATTGGAGA TAAATATGCT CCCATTGTAG CTGCATTTTC TTCTCGCGGA 27415 || |||||| |||||||||| | || | ||| ||||| || | || ||||||| |||||||||| CAAGGAACAA TAATTGGAGA TGAAAACGCT CCCATAGTTG CTTCATTTTC TTCTCGCGGA 477 CCAAGTGAAG CTAGTCCTGG AATCTTGAAA CCTGACATAA TCGGTCCTGG TGTTAATATC 27355 |||| | || |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CCAAATAAAC CTAGTCCTGG CATCTTGAAA CCTGACATAA TCGGTCCTGG TGTTAATATC 537 CTTGCTGCTT GGCCTACCTC TATGGATGGC AACAAAAACA CCAAATCCAC ATTCAATATT 27295 |||||||||| |||||||||| |||||| | |||||||| | |||||||||| |||||||||| CTTGCTGCTT GGCCTACCTC CGTGGATGAC AACAAAAAAA CCAAATCCAC ATTCAATATT 597 ATATCAGGCA CCTCAATGTC 27275 |||||| ||| |||| ||||| ATATCANGCA CCTCGATGTC 617 hqPGS_C08HBa0165B06.1-_SGN-E306389+ (27885 27275) ******************************************************************************** EST sequence 267 +strand 362 n (File: SGN-E200689+) 1 GGAAAGATAG TATTATGTTT AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT 61 GTGAAGGATG CTGGAGGTGT TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT 121 AAATCAGCTG ATGCTCATGT TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA 181 ATTCGTGCCT ATACAAACTC AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA 241 GTAATTGGAG ATAAAAATGC TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA 301 CCTAATCCTG GGATCTTGAA ACCTGACATA ATTGGTCCTG GTGTTAATAT CCTCGCTGCT 361 TG Predicted gene structure (within gDNA segment 28737 to 26653): Exon 1 27705 27344 ( 362 n); cDNA 1 362 ( 362 n); score: 0.862 MATCH C08HBa0165B06.1- SGN-E200689+ 0.862 362 1.000 C PGS_C08HBa0165B06.1-_SGN-E200689+ (27705 27344) Alignment (genomic DNA sequence = upper lines): GGAAAGATAG TATTATGTCT ACAAGATGAT ATTGTTTCCA ATATTGAAAA AGGACAAGCT 27646 |||||||||| |||||||| | | | | ||| ||| || |||| || |||||||||| GGAAAGATAG TATTATGTTT AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT 60 GTGAAGGATG CTGGAGGTGT TGGCATGATT ATCATCAACC AGCCAAGTTA CGGTGCCACT 27586 |||||||||| |||||||||| |||||||||| ||||||||| || || |||| |||| GTGAAGGATG CTGGAGGTGT TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT 120 AAATCAGCTG ATGCTCATGT TCTTCCAGCA ATGGATGTTT CAGCTGCAGA TGGAACAAAA 27526 |||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| ||||| ||| AAATCAGCTG ATGCTCATGT TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA 180 ATCATTTCCT ATATGCACTC AACATCAAAC CCTATTGCTA GAATCACATT CCATGGAACA 27466 || | ||| ||| |||| || ||| ||| ||| |||||| ||||||| | ||| |||||| ATTCGTGCCT ATACAAACTC AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA 240 GTAATTGGAG ATAAATATGC TCCCATTGTA GCTGCATTTT CTTCTCGCGG ACCAAGTGAA 27406 |||||||||| ||||| |||| ||| || || |||||||||| |||||||||| ||||||| || GTAATTGGAG ATAAAAATGC TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA 300 GCTAGTCCTG GAATCTTGAA ACCTGACATA ATCGGTCCTG GTGTTAATAT CCTTGCTGCT 27346 ||| ||||| | |||||||| |||||||||| || ||||||| |||||||||| ||| |||||| CCTAATCCTG GGATCTTGAA ACCTGACATA ATTGGTCCTG GTGTTAATAT CCTCGCTGCT 360 TG 27344 || TG 362 hqPGS_C08HBa0165B06.1-_SGN-E200689+ (27705 27344) ******************************************************************************** EST sequence 151 +strand 490 n (File: SGN-E282432+) 1 TTTGAAGGAT TTTTTGCTTA TCGTCCAAAG ATTTCCAACG CAACATTCTT CACTCTATTT 61 GATGCTGCAA AAAATGCAAA AGATCCATCC GAAACCCCTT ATTGCAGACG AGGTTCACTC 121 ACTGACCCTG CTATAAGAGG AAAGATAGTA TTATGTTCAG CACTCGGCCA TGTAGCCAAT 181 GTTGATAAAG GACAAGCTGT GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCCA 241 TCACAATATG GTGTCACTAA ATCAGCTGAT GCTCATGTTC TTCCAGCATT GGTTGTTTCA 301 GCTGCAGACG GAACAAAAAT TCTTGCTTAC ATGAACTCAA CATCAAGCCC TGTTGCTACA 361 ATTGCATTCC AAGGAACAAT AATTGGAGAC AAAAATGCTC CTATGGTTGC TGCATTTTCC 421 TCAAGAGGAC CAAGTAGAGC TAGTCCTGGA ATCTTGAAGC CTGACATAAT CGGGCCTGGT 481 GCTAATATCC Predicted gene structure (within gDNA segment 28578 to 24926): Exon 1 27769 27354 ( 416 n); cDNA 75 490 ( 416 n); score: 0.849 MATCH C08HBa0165B06.1- SGN-E282432+ 0.849 416 0.849 C PGS_C08HBa0165B06.1-_SGN-E282432+ (27769 27354) Alignment (genomic DNA sequence = upper lines): TGCAAAAAAT GCAAGTGAAA CTCCTTATTG CAGACCAGGA TCACTAACTG ACCCTGCTGT 27710 ||||||| || || |||| | |||||||| ||||| ||| ||||| |||| |||||||| | TGCAAAAGAT CCATCCGAAA CCCCTTATTG CAGACGAGGT TCACTCACTG ACCCTGCTAT 134 AAGAGGAAAG ATAGTATTAT GTCTACAAGA TGATATTGTT TCCAATATTG AAAAAGGACA 27650 |||||||||| |||||||||| || | | | ||| ||||| ||| | |||||||| AAGAGGAAAG ATAGTATTAT GTTCAGCACT CGGCCATGTA GCCAATGTTG ATAAAGGACA 194 AGCTGTGAAG GATGCTGGAG GTGTTGGCAT GATTATCATC AACCAGCCAA GTTACGGTGC 27590 |||||||||| |||||||||| |||||||||| |||||||||| |||| || || |||| AGCTGTGAAG GATGCTGGAG GTGTTGGCAT GATTATCATC AACCCATCAC AATATGGTGT 254 CACTAAATCA GCTGATGCTC ATGTTCTTCC AGCAATGGAT GTTTCAGCTG CAGATGGAAC 27530 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| |||| ||||| CACTAAATCA GCTGATGCTC ATGTTCTTCC AGCATTGGTT GTTTCAGCTG CAGACGGAAC 314 AAAAATCATT TCCTATATGC ACTCAACATC AAACCCTATT GCTAGAATCA CATTCCATGG 27470 |||||| || | || ||| |||||||||| || |||| || |||| ||| ||||||| || AAAAATTCTT GCTTACATGA ACTCAACATC AAGCCCTGTT GCTACAATTG CATTCCAAGG 374 AACAGTAATT GGAGATAAAT ATGCTCCCAT TGTAGCTGCA TTTTCTTCTC GCGGACCAAG 27410 |||| ||||| ||||| ||| ||||||| || || |||||| ||||| || | |||||||| AACAATAATT GGAGACAAAA ATGCTCCTAT GGTTGCTGCA TTTTCCTCAA GAGGACCAAG 434 TGAAGCTAGT CCTGGAATCT TGAAACCTGA CATAATCGGT CCTGGTGTTA ATATCC 27354 | ||||||| |||||||||| |||| ||||| ||||||||| ||||||| || |||||| TAGAGCTAGT CCTGGAATCT TGAAGCCTGA CATAATCGGG CCTGGTGCTA ATATCC 490 hqPGS_C08HBa0165B06.1-_SGN-E282432+ (27769 27354) ******************************************************************************** EST sequence 372 +strand 494 n (File: SGN-E210009+) 1 TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 61 CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 121 TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 181 AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 241 TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 301 TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 361 AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 421 TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 481 ACCTGACATA ATTG Predicted gene structure (within gDNA segment 28798 to 26744): Exon 1 27856 27374 ( 483 n); cDNA 1 492 ( 492 n); score: 0.825 MATCH C08HBa0165B06.1- SGN-E210009+ 0.825 483 0.978 C PGS_C08HBa0165B06.1-_SGN-E210009+ (27856 27374) Alignment (genomic DNA sequence = upper lines): TAATCTCGGA AATAGAAAGA AATATGAAGG AGAATCAACT TATCGTCCAA AGATTTCCAG 27797 ||| |||||| ||| || || ||| |||||| |||||| || |||||||||| ||||||||| TAAGCTCGGA AATGGAGAGG AATTTGAAGG AGAATCTGCT TATCGTCCAA AGATTTCCAA 60 CTCAACATTC TTCACTCTAT ATGATGCTGC AAAAAATGC- -AAG-T---- --GAAACTCC 27746 |||||||||| |||||||||| ||||||||| ||||||||| ||| | ||||| || CTCAACATTC TTCACTCTAT TTGATGCTGC AAAAAATGCA AAAGATCCAT CTGAAACCCC 120 TTATTGCAGA CCAGGATCAC TAACTGACCC TGCTGTAAGA GGAAAGATAG TATTATGTCT 27686 |||||||||| | ||| |||| | |||||||| |||| ||||| |||||||||| |||||||| | TTATTGCAGA CGAGGGTCAC TCACTGACCC TGCTATAAGA GGAAAGATAG TATTATGTTT 180 ACAAGATGAT ATTGTTTCCA ATATTGAAAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 27626 | | | ||| ||| || |||| || |||||||||| |||||||||| |||||||||| AGCATTCGGC GGTGTAGCCA ATGTTGATAA AGGACAAGCT GTGAAGGATG CTGGAGGTGT 240 TGGCATGATT ATCATCAACC AGCCAAGTTA CGGTGCCACT AAATCAGCTG ATGCTCATGT 27566 |||||||||| ||||||||| || || |||| |||| |||||||||| |||||||||| TGGCATGATT GTCATCAACC CATCACAATA TGGTGTCACT AAATCAGCTG ATGCTCATGT 300 TCTTCCAGCA ATGGATGTTT CAGCTGCAGA TGGAACAAAA ATCATTTCCT ATATGCACTC 27506 |||||||||| ||| ||||| |||||||||| ||||| ||| || | ||| ||| |||| TCTTCCAGCA TTGGTTGTTT CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC 360 AACATCAAAC CCTATTGCTA GAATCACATT CCATGGAACA GTAATTGGAG ATAAATATGC 27446 || ||| ||| ||| |||||| ||||||| | ||| |||||| |||||||||| ||||| |||| AATATCGAAC CCTGTTGCTA CAATCACAAT CCAAGGAACA GTAATTGGAG ATAAAAATGC 420 TCCCATTGTA GCTGCATTTT CTTCTCGCGG ACCAAGTGAA GCTAGTCCTG GAATCTTGAA 27386 ||| || || |||||||||| |||||||||| ||||||| || ||| ||||| | |||||||| TCCAATAGTT GCTGCATTTT CTTCTCGCGG ACCAAGTAAA CCTAATCCTG GGATCTTGAA 480 ACCTGACATA AT 27374 |||||||||| || ACCTGACATA AT 492 hqPGS_C08HBa0165B06.1-_SGN-E210009+ (27856 27374) ******************************************************************************** EST sequence 201 +strand 655 n (File: SGN-E335107+) 1 TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 61 GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 121 AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 181 TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 241 CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 301 TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 361 AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 421 TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 481 GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 541 CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 601 TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG Predicted gene structure (within gDNA segment 28829 to 25966): Exon 1 28103 27458 ( 646 n); cDNA 1 655 ( 655 n); score: 0.812 MATCH C08HBa0165B06.1- SGN-E335107+ 0.812 646 0.986 C PGS_C08HBa0165B06.1-_SGN-E335107+ (28103 27458) Alignment (genomic DNA sequence = upper lines): TTTTAGCTGC CATAGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATATCCTTGG 28044 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| || ||| | TTTTAGCTGC CATGGATTCA GCTATAGATG ATGGAGTAGA TATTCTTTCA ATGTCCCTTA 60 GTGGATCTCC GAGCCCTTTC TATGATGACT GTATCGCTCT TGGGGCATAC AGTGCAACAG 27984 ||||| ||| | ||||||| || ||| ||| ||| | ||||| ||| |||||||| | GTGGAGGTCC AATCCCTTTC CATAGAGACA ATATTGCTAT CGGGGCGTAC AGTGCAACGG 120 AAAGAGGCAT TCTTGTAAGT TCTTCTGCAG GCAATGAAGG TCCTTCTGTT GCCTCAGTGG 27924 ||||||| || |||||||||| | |||||| | | ||| || ||| || || | ||| | AAAGAGGAAT TCTTGTAAGT TGTTCTGCTG GAAATAGTGG TCCATCCTTT ATCACAGCAG 180 AAAAAGCAGC CCCGTGGATT CTTACAGTAG GTGCCAGCAC ACTTGATAGA AAGATAAAAG 27864 ||| | || ||| |||||| ||||| |||| |||||||||| ||||| ||| |||||||||| TAAACACCGC CCCTTGGATT CTTACGGTAG GTGCCAGCAC GCTTGACAGA AAGATAAAAG 240 CTACTGTTAA TCTCGGAAAT AGAAAGAAAT ATGAAGGAGA ATCAACTTAT CGTCCAAAGA 27804 ||||||||| || |||||| || || ||| ||||||||| ||| ||||| |||||||||| CTACTGTTAC GCTTGGAAAT GGAGAGGAAT TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA 300 TTTCCAGCTC AACATTCTTC ACTCTATATG ATGCTGCAAA AAATGC--AA G-----T--G 27753 |||||| | | |||||||||| ||||||| || |||||||||| |||||| || | | | TTTCCAACGC AACATTCTTC ACTCTATTTG ATGCTGCAAA AAATGCAAAA GATCCATCCG 360 AAACTCCTTA TTGCAGACCA GGATCACTAA CTGACCCTGC TGTAAGAGGA AAGATAGTAT 27693 |||| ||||| |||||||| | || ||||| | |||||||||| | |||||||| |||||||||| AAACCCCTTA TTGCAGACGA GGTTCACTCA CTGACCCTGC TATAAGAGGA AAGATAGTAT 420 TATGTCTACA AGATGATATT GTTTCCAATA TTGAAAAAGG ACAAGCTGTG AAGGATGCTG 27633 ||||| | | | | || ||||| |||| ||||| |||||||||| |||||||||| TATGTTCAGC ACTCGGCCAT GTAGCCAATG TTGATAAAGG ACAAGCTGTG AAGGATGCTG 480 GAGGTGTTGG CATGATTATC ATCAACCAGC CAAGTTACGG TGCCACTAAA TCAGCTGATG 27573 |||||||||| |||||||||| ||||||| || || || || ||||||| |||||||||| GAGGTGTTGG CATGATTATC ATCAACCCAT CACAATATGG TGTCACTAAA TCAGCTGATG 540 CTCATGTTCT TCCAGCAATG GATGTTTCAG CTGCAGATGG AACAAAAATC ATTTCCTATA 27513 |||||||||| ||||||| || | |||||||| ||||||| || ||||||||| || | || | CTCATGTTCT TCCAGCATTG GTTGTTTCAG CTGCAGACGG AACAAAAATT CTTGCTTACA 600 TGCACTCAAC ATCAAACCCT ATTGCTAGAA TCACATTCCA TGGAACAGTA ATTGG 27458 || ||||||| ||||| |||| |||||| || | ||||||| |||||| || ||||| TGAACTCAAC ATCAAGCCCT GTTGCTACAA TTGCATTCCA AGGAACAATA ATTGG 655 hqPGS_C08HBa0165B06.1-_SGN-E335107+ (28103 27458) ******************************************************************************** EST sequence 388 +strand 556 n (File: SGN-E208913+) 1 AAGTATTGCT CTCGGGGCGT ACAGTGCAAC ACAAAGAGGC ATTCTTGTTA GTTGCTCAGC 61 AGGCAATAAT GGTCCTTCGC CTGCCTCAGT AGATAACTCA GCCCCTTGGA TTCTTACAGT 121 AGGTGCCAGC ACGCTTGATA GAAAGATAAA AGCTACTGCT AAGCTCGGAA ATGGAGAGGA 181 ATTTGAAGGA GAATCTGCTT ATCGTCCAAA GATTTCCAAC TCAACATTCT TCACTCTATT 241 TGATGCTGCA AAAAATGCAA AAGATCCATC TGAAACCCCT TATTGCAGAC GAGGGTCACT 301 CACTGACCCT GCTATAAGAG GAAAGATAGT ATTATGTTTA GCATTCGGCG GTGTAGCCAA 361 TGTTGATAAA GGACAAGCTG TGAAGGATGC TGGAGGTGTT GGCATGATTG TCATCAACCC 421 ATCACAATAT GGTGTCACTA AATCAGCTGA TGCTCATGTT CTTCCAGCAT TTCTGGTTGT 481 TTCAGCTGCA GATGGAAGCA AAATTCGTGC CTATACAAAC TCAATATCGA ACCCTGTTGC 541 TACAATCACA ATCCAA Predicted gene structure (within gDNA segment 29569 to 26331): Exon 1 28013 27473 ( 541 n); cDNA 3 555 ( 553 n); score: 0.810 MATCH C08HBa0165B06.1- SGN-E208913+ 0.810 541 0.973 C PGS_C08HBa0165B06.1-_SGN-E208913+ (28013 27473) Alignment (genomic DNA sequence = upper lines): GTATCGCTCT TGGGGCATAC AGTGCAACAG AAAGAGGCAT TCTTGTAAGT TCTTCTGCAG 27954 |||| ||||| ||||| ||| ||||||||| |||||||||| |||||| ||| | || |||| GTATTGCTCT CGGGGCGTAC AGTGCAACAC AAAGAGGCAT TCTTGTTAGT TGCTCAGCAG 62 GCAATGAAGG TCCTTCTGTT GCCTCAGTGG AAAAAGCAGC CCCGTGGATT CTTACAGTAG 27894 ||||| | || |||||| | |||||||| | | || |||| ||| |||||| |||||||||| GCAATAATGG TCCTTCGCCT GCCTCAGTAG ATAACTCAGC CCCTTGGATT CTTACAGTAG 122 GTGCCAGCAC ACTTGATAGA AAGATAAAAG CTACTGTTAA TCTCGGAAAT AGAAAGAAAT 27834 |||||||||| ||||||||| |||||||||| |||||| ||| ||||||||| || || ||| GTGCCAGCAC GCTTGATAGA AAGATAAAAG CTACTGCTAA GCTCGGAAAT GGAGAGGAAT 182 ATGAAGGAGA ATCAACTTAT CGTCCAAAGA TTTCCAGCTC AACATTCTTC ACTCTATATG 27774 ||||||||| ||| ||||| |||||||||| |||||| ||| |||||||||| ||||||| || TTGAAGGAGA ATCTGCTTAT CGTCCAAAGA TTTCCAACTC AACATTCTTC ACTCTATTTG 242 ATGCTGCAAA AAATGC--AA G-------TG AAACTCCTTA TTGCAGACCA GGATCACTAA 27723 |||||||||| |||||| || | || |||| ||||| |||||||| | || ||||| | ATGCTGCAAA AAATGCAAAA GATCCATCTG AAACCCCTTA TTGCAGACGA GGGTCACTCA 302 CTGACCCTGC TGTAAGAGGA AAGATAGTAT TATGTCTACA AGATGATATT GTTTCCAATA 27663 |||||||||| | |||||||| |||||||||| ||||| || | | | || ||||| CTGACCCTGC TATAAGAGGA AAGATAGTAT TATGTTTAGC ATTCGGCGGT GTAGCCAATG 362 TTGAAAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG CATGATTATC ATCAACCAGC 27603 |||| ||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||| TTGATAAAGG ACAAGCTGTG AAGGATGCTG GAGGTGTTGG CATGATTGTC ATCAACCCAT 422 CAAGTTACGG TGCCACTAAA TCAGCTGATG CTCATGTTCT TCCAGCA-A- -TGGATGTTT 27546 || || || || ||||||| |||||||||| |||||||||| ||||||| ||| ||||| CACAATATGG TGTCACTAAA TCAGCTGATG CTCATGTTCT TCCAGCATTT CTGGTTGTTT 482 CAGCTGCAGA TGGAACAAAA ATCATTTCCT ATATGCACTC AACATCAAAC CCTATTGCTA 27486 |||||||||| ||||| ||| || | ||| ||| |||| || ||| ||| ||| |||||| CAGCTGCAGA TGGAAGCAAA ATTCGTGCCT ATACAAACTC AATATCGAAC CCTGTTGCTA 542 GAATCACATT CCA 27473 ||||||| | ||| CAATCACAAT CCA 555 hqPGS_C08HBa0165B06.1-_SGN-E208913+ (28013 27473) ******************************************************************************** EST sequence 298 +strand 578 n (File: SGN-E244401+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 541 AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT Predicted gene structure (within gDNA segment 28759 to 24074): Exon 1 28114 27546 ( 569 n); cDNA 1 578 ( 578 n); score: 0.820 MATCH C08HBa0165B06.1- SGN-E244401+ 0.820 569 0.984 C PGS_C08HBa0165B06.1-_SGN-E244401+ (28114 27546) Alignment (genomic DNA sequence = upper lines): TGACTGTGAT ATTTTAGCTG CCATAGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 28055 |||| ||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATATCCTTG GGTGGATCTC CGAGCCCTTT CTATGATGAC TGTATCGCTC TTGGGGCATA 27995 |||||| | |||||||||| | | | |||| |||||||||| ||| |||| |||||||||| TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 CAGTGCAACA GAAAGAGGCA TTCTTGTAAG TTCTTCTGCA GGCAATGAAG GTCCTTCTGT 27935 ||||||||| | |||||| || ||||||| || ||||||| || ||| || | |||| | CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 TGCCTCAGTG GAAAAAGCAG CCCCGTGGAT TCTTACAGTA GGTGCCAGCA CACTTGATAG 27875 ||||||||| | ||| |||| |||| ||||| |||||||||| |||||||||| | |||||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GCTACTGTTA ATCTCGGAAA TAGAAAGAAA TATGAAGGAG AATCAACTTA 27815 |||||||||| |||||||||| | || ||||| | || || || | ||||||| |||| |||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCAAAG ATTTCCAGCT CAACATTCTT CACTCTATAT GATGCTGCAA AAAATGC--A 27757 ||||||| || ||||||| || |||||||||| |||||||| | |||||||||| || |||| | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 AG-----T-- GAAACTCCTT ATTGCAGACC AGGATCACTA ACTGACCCTG CTGTAAGAGG 27704 || | ||||| |||| |||||| ||| ||| ||||| | | ||||| | ||||||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGTA TTATGTCTAC AAGATGATAT TGTTTCCAAT ATTGAAAAAG GACAAGCTGT 27644 |||||||||| ||||||||| || | | || |||| | ||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCAG CCAAGTTACG GTGCCACTAA 27584 |||||||||| |||||||||| |||||||| | |||||| || || | ||| |||||| GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GTGTCACTAA 540 ATCAGCTGAT GCTCATGTTC TTCCAGCAAT GGATGTTT 27546 | |||||||| |||||||||| |||||||| | |||| ||| AACAGCTGAT GCTCATGTTC TTCCAGCATT GGATATTT 578 hqPGS_C08HBa0165B06.1-_SGN-E244401+ (28114 27546) ******************************************************************************** EST sequence 307 +strand 560 n (File: SGN-E244422+) 1 TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 61 TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 121 CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 181 TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 241 AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 301 TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 361 AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 421 AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 481 GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 541 AACAGCTGAT GCTCATGTTC Predicted gene structure (within gDNA segment 28759 to 24254): Exon 1 28114 27564 ( 551 n); cDNA 1 560 ( 560 n); score: 0.816 MATCH C08HBa0165B06.1- SGN-E244422+ 0.816 551 0.984 C PGS_C08HBa0165B06.1-_SGN-E244422+ (28114 27564) Alignment (genomic DNA sequence = upper lines): TGACTGTGAT ATTTTAGCTG CCATAGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 28055 |||| ||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TGACAGTGAT ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC 60 AATATCCTTG GGTGGATCTC CGAGCCCTTT CTATGATGAC TGTATCGCTC TTGGGGCATA 27995 |||||| | |||||||||| | | | |||| |||||||||| ||| |||| |||||||||| TATATCCATT GGTGGATCTC CCAACTCTTT CTATGATGAC CCTATTGCTC TTGGGGCATA 120 CAGTGCAACA GAAAGAGGCA TTCTTGTAAG TTCTTCTGCA GGCAATGAAG GTCCTTCTGT 27935 ||||||||| | |||||| || ||||||| || ||||||| || ||| || | |||| | CAGTGCAACG GCAAGAGGTG TTTTTGTAAG TTGTTCTGCA GGTAATAGAG GCCCTTTGCT 180 TGCCTCAGTG GAAAAAGCAG CCCCGTGGAT TCTTACAGTA GGTGCCAGCA CACTTGATAG 27875 ||||||||| | ||| |||| |||| ||||| |||||||||| |||||||||| | |||||||| TGCCTCAGTT GGAAATGCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG 240 AAAGATAAAA GCTACTGTTA ATCTCGGAAA TAGAAAGAAA TATGAAGGAG AATCAACTTA 27815 |||||||||| |||||||||| | || ||||| | || || || | ||||||| |||| |||| AAAGATAAAA GCTACTGTTA AGCTTGGAAA TGGAGAGGAA TTCGAAGGAG AATCTGCTTA 300 TCGTCCAAAG ATTTCCAGCT CAACATTCTT CACTCTATAT GATGCTGCAA AAAATGC--A 27757 ||||||| || ||||||| || |||||||||| |||||||| | |||||||||| || |||| | TCGTCCACAG ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AACATGCAAA 360 AG-----T-- GAAACTCCTT ATTGCAGACC AGGATCACTA ACTGACCCTG CTGTAAGAGG 27704 || | ||||| |||| |||||| ||| ||| ||||| | | ||||| | ||||||| AGATCCATCG GAAACCCCTT ATTGCAAACC AGGGTCACTC AAGGGCCCTG TTATAAGAGG 420 AAAGATAGTA TTATGTCTAC AAGATGATAT TGTTTCCAAT ATTGAAAAAG GACAAGCTGT 27644 |||||||||| ||||||||| || | | || |||| | ||| |||| || ||| ||| AAAGATAGTA TTATGTCTAG CAGGCGGTGG CGTCTCCAGT GTTGCTAAAG GAAAAGTTGT 480 GAAGGATGCT GGAGGTGTTG GCATGATTAT CATCAACCAG CCAAGTTACG GTGCCACTAA 27584 |||||||||| |||||||||| |||||||| | |||||| || || | | | |||||| GAAGGATGCT GGAGGTGTTG GCATGATTGT CATCAAAACA TCACAATATG GGGTCACTAA 540 ATCAGCTGAT GCTCATGTTC 27564 | |||||||| |||||||||| AACAGCTGAT GCTCATGTTC 560 hqPGS_C08HBa0165B06.1-_SGN-E244422+ (28114 27564) ******************************************************************************** EST sequence 395 +strand 435 n (File: SGN-E208810+) 1 AAGTATTGCT CTCGGGGCGT ACAGTGCAAC ACAAAGAGGC ATTCTTGTTA GTTGCTCAGC 61 AGGCAATAAT GGTCCTTCGC CTGCCTCACT AGATAACTCA GCCCCTTGGA TTCTTACAGT 121 AGGTGCCAGC ACGCTTGATA GAAAGATAAA AGCTACTGCT AAGCTCGGAA ATGGAGAGGA 181 ATTTGAAGGA CAATCTGCTT ATCGTCCAAA GATTTCCAAC TCAACATTCT TCACTCTATT 241 TGATGCTGCA AAAAATGCAA AAGATCCATC TGAAACCCCT TATTGCAGAC GAGGGTCACT 301 CACTGACCCT GCTATAATAG GAAAGATAGT ATTATGTTTA GCCATTCGGC GGTGTAGCCA 361 ATGTTGATAA AGGACAACCC TGTTAAGGAT GCTGCAGGTG TTGGGCATGA TTGTCATCAA 421 CCCATCACAA TATGG Predicted gene structure (within gDNA segment 29569 to 25396): Exon 1 28013 27593 ( 421 n); cDNA 3 435 ( 433 n); score: 0.784 MATCH C08HBa0165B06.1- SGN-E208810+ 0.784 421 0.968 C PGS_C08HBa0165B06.1-_SGN-E208810+ (28013 27593) Alignment (genomic DNA sequence = upper lines): GTATCGCTCT TGGGGCATAC AGTGCAACAG AAAGAGGCAT TCTTGTAAGT TCTTCTGCAG 27954 |||| ||||| ||||| ||| ||||||||| |||||||||| |||||| ||| | || |||| GTATTGCTCT CGGGGCGTAC AGTGCAACAC AAAGAGGCAT TCTTGTTAGT TGCTCAGCAG 62 GCAATGAAGG TCCTTCTGTT GCCTCAGTGG AAAAAGCAGC CCCGTGGATT CTTACAGTAG 27894 ||||| | || |||||| | |||||| | | | || |||| ||| |||||| |||||||||| GCAATAATGG TCCTTCGCCT GCCTCACTAG ATAACTCAGC CCCTTGGATT CTTACAGTAG 122 GTGCCAGCAC ACTTGATAGA AAGATAAAAG CTACTGTTAA TCTCGGAAAT AGAAAGAAAT 27834 |||||||||| ||||||||| |||||||||| |||||| ||| ||||||||| || || ||| GTGCCAGCAC GCTTGATAGA AAGATAAAAG CTACTGCTAA GCTCGGAAAT GGAGAGGAAT 182 ATGAAGGAGA ATCAACTTAT CGTCCAAAGA TTTCCAGCTC AACATTCTTC ACTCTATATG 27774 ||||||| | ||| ||||| |||||||||| |||||| ||| |||||||||| ||||||| || TTGAAGGACA ATCTGCTTAT CGTCCAAAGA TTTCCAACTC AACATTCTTC ACTCTATTTG 242 ATGCTGCAAA AAATGC--AA G-------TG AAACTCCTTA TTGCAGACCA GGATCACTAA 27723 |||||||||| |||||| || | || |||| ||||| |||||||| | || ||||| | ATGCTGCAAA AAATGCAAAA GATCCATCTG AAACCCCTTA TTGCAGACGA GGGTCACTCA 302 CTGACCCTGC TGTAAGAGGA AAGATAGTAT TATGTCTA-C AAGATGATAT TGTTTCCAAT 27664 |||||||||| | ||| |||| |||||||||| ||||| || | | | ||| ||||| CTGACCCTGC TATAATAGGA AAGATAGTAT TATGTTTAGC CATTCGGCGG TGTAGCCAAT 362 ATTGAAAAAG GACAA-GCTG TGAAGGATGC TGGAGGTGTT -GGCATGATT ATCATCAACC 27606 |||| |||| ||||| ||| | |||||||| || ||||||| ||||||||| ||||||||| GTTGATAAAG GACAACCCTG TTAAGGATGC TGCAGGTGTT GGGCATGATT GTCATCAACC 422 AGCCAAGTTA CGG 27593 || || || CATCACAATA TGG 435 hqPGS_C08HBa0165B06.1-_SGN-E208810+ (28013 27593) ******************************************************************************** EST sequence 256 +strand 465 n (File: SGN-E202140+) 1 TTTTGTGAAA GGTGCTAATG TATATGAAAA TGCTAATGGA ACTGCAGTTG GTGTTGCTCC 61 TCTTGCCCAT ATAGCCATAT ATAAGGTGTG TAACTCTGTT GGTTGTTCTG ACAGTGATAT 121 TTTAGCTGCC ATGGATTCAG CTATAGATGA TGGAGTAGAT ATTCTTTCTA TATCCATTGG 181 TGGATCTCTG AGACCTCTTT ATGATGAAAG TATTGCTCTC GGGGCGTACA GTGCAACACA 241 AAGAGGCATT CTTGTTAGTT GCTCAGCAGG CAATAATGGT CCTTCGCCTG CCTCAGTAGA 301 TAACTCAGCC CCTTGGATTC TTACAGTAGG TGCCAGCACG CTTGATAGAA AGATAAAAGC 361 TACTGCTAAG CTCGGAAATG GAGAGGAATT TGAAGGAGAA TCTGCTTATC GTCCAAAGAT 421 TTCCAACTCA ACATTCTTCA CTCTATTTGA TGCTGCAAAA AATGC Predicted gene structure (within gDNA segment 29839 to 27148): Exon 1 28224 27758 ( 467 n); cDNA 2 465 ( 464 n); score: 0.874 MATCH C08HBa0165B06.1- SGN-E202140+ 0.874 467 1.004 C PGS_C08HBa0165B06.1-_SGN-E202140+ (28224 27758) Alignment (genomic DNA sequence = upper lines): TTTGCAAAAG GTGCTAATGT ATTTGGGAAT GCTAATGGCA CTGCTGTTGG TGTTGCCCCT 28165 |||| |||| |||||||||| || || ||| |||||||| | |||| ||||| |||||| ||| TTTGTGAAAG GTGCTAATGT ATATGAAAAT GCTAATGGAA CTGCAGTTGG TGTTGCTCCT 61 CTTGCCCACC TAGCCATATA TAAGGTTTGC AATTCTGATG GCGAGTGTCC TGACTGTGAT 28105 |||||||| |||||||||| |||||| || || |||| || | || | | |||| ||||| CTTGCCCATA TAGCCATATA TAAGGTGTGT AACTCTGTTG GTT-GT-T-C TGACAGTGAT 118 ATTTTAGCTG CCATAGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC AATATCCTTG 28045 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||| | ATTTTAGCTG CCATGGATTC AGCTATAGAT GATGGAGTAG ATATTCTTTC TATATCCATT 178 GGTGGATCTC CGAGCCCTTT CTATGATGAC TGTATCGCTC TTGGGGCATA CAGTGCAACA 27985 |||||||||| ||| ||| | |||||||| |||| |||| | ||||| || |||||||||| GGTGGATCTC TGAGACCTCT TTATGATGAA AGTATTGCTC TCGGGGCGTA CAGTGCAACA 238 GAAAGAGGCA TTCTTGTAAG TTCTTCTGCA GGCAATGAAG GTCCTTCTGT TGCCTCAGTG 27925 ||||||||| ||||||| || || || ||| |||||| | | ||||||| ||||||||| CAAAGAGGCA TTCTTGTTAG TTGCTCAGCA GGCAATAATG GTCCTTCGCC TGCCTCAGTA 298 GAAAAAGCAG CCCCGTGGAT TCTTACAGTA GGTGCCAGCA CACTTGATAG AAAGATAAAA 27865 || || ||| |||| ||||| |||||||||| |||||||||| | |||||||| |||||||||| GATAACTCAG CCCCTTGGAT TCTTACAGTA GGTGCCAGCA CGCTTGATAG AAAGATAAAA 358 GCTACTGTTA ATCTCGGAAA TAGAAAGAAA TATGAAGGAG AATCAACTTA TCGTCCAAAG 27805 ||||||| || | |||||||| | || || || | |||||||| |||| |||| |||||||||| GCTACTGCTA AGCTCGGAAA TGGAGAGGAA TTTGAAGGAG AATCTGCTTA TCGTCCAAAG 418 ATTTCCAGCT CAACATTCTT CACTCTATAT GATGCTGCAA AAAATGC 27758 ||||||| || |||||||||| |||||||| | |||||||||| ||||||| ATTTCCAACT CAACATTCTT CACTCTATTT GATGCTGCAA AAAATGC 465 hqPGS_C08HBa0165B06.1-_SGN-E202140+ (28224 27758) ******************************************************************************** EST sequence 184 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 25417 to 29958): Exon 1 28079 28854 ( 776 n); cDNA 1 779 ( 779 n); score: 0.882 MATCH C08HBa0165B06.1+ SGN-E539488- 0.882 776 0.996 C PGS_C08HBa0165B06.1+_SGN-E539488- (28079 28854) Alignment (genomic DNA sequence = upper lines): ATAGCTGAAT CTATGGCAGC TAAAATATCA CAGTCAGGAC ACTCGCCATC AGAATTGCAA 28138 ||||||| || | |||||||| ||||||||| | ||||| || | ||||||| |||| | || ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA TGGCTAGGTG GGCAAGAGGG GCAACACCAA CAGCAGTGCC ATTAGCATTC 28198 |||||||||| |||| ||| ||| |||||| |||||||||| ||||||| || |||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCAAATACAT TAGCACCTTT TGCAAAGGCT CCTGCAGCTG TGCCTGCTGT GTGTGTACCA 28258 ||||||| || |||||||||| |||||||| || ||||||| |||||||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCAGTAT CATCTATCAA GGAACCGTTA GCAATTTGGT AAGACCTCGC TCCAATGAGC 28318 |||||| ||| |||||||| |||||| || ||| ||| | ||||||| || |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGGTTTT GAAATTAGAC TCACAAACTC CTTTCCACTT AGCAGGCGGA 28378 |||||||||| |||| || | |||||| ||| |||||||||| |||||||||| ||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATCC CAAAGTCGCT AAATGAAGGA TGGTCAGGAT AAATTCCAGT GTCTATAACT 28438 |||||||||| ||| || || |||||||||| || |||||| ||||||||| ||||| |||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CGCCTTTCCC ATAGTTGGAA TCCTTCCACA AGCCCATGTT CTGTTGCAAA 28498 |||||||||| | ||| || | | |||||| || ||||||| |||||||||| |||||||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCGAGAAAGT TCGGAGTATG AGTAGTATGC AAGGTGAAAA TCCTCTGTTT CTGAGCAGAG 28558 || ||||| | |||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTATTCTC CATTTCCTTC ACTTGTGCTG CTGTTAATCT TGCTGCAAAC 28618 |||||||||| |||| ||||| |||||||||| |||||||||| | |||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTTTCATCA CATTGTGATA GGAATAGAGC ATGCTAGCAG CCTCTTCATT TTCACTTGAG 28678 |||||||||| ||||||| || ||| |||| | |||||||||| ||||||||| | |||| ||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTGATT---G TTGTAGTTTT AGGCAAAAAA GATAGATAAT AGTTATCTAA ATCCGTTACC 28735 || ||| | | |||||||| |||||||||| || || |||| || | ||||| |||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTGTG TAGAAATTAC GCTTTCAGGA GATTCAACAT GGACTATATA AGTCTCGAGA 28795 |||||||| | |||||||| | ||||||| |||||||||| |||||||||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TCATTCTGAA TAGTAGGCCT TGGGAAAGAA CAAAAGATGA AAACAAGAAA TATTTTCAA 28854 ||| |||||| || ||||||| | ||||||| ||||| |||| | | ||||| |||||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1+_SGN-E539488- (28079 28854) ******************************************************************************** EST sequence 326 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 27698 to 29699): Exon 1 28348 28890 ( 543 n); cDNA 5 550 ( 546 n); score: 0.883 MATCH C08HBa0165B06.1+ SGN-E207645- 0.883 543 0.984 C PGS_C08HBa0165B06.1+_SGN-E207645- (28348 28890) Alignment (genomic DNA sequence = upper lines): CTCACAAACT CCTTTCCACT TAGCAGGCGG AGGAGGCATC CCAAAGTCGC TAAATGAAGG 28407 |||||||||| |||||||||| |||||||||| ||||||||| |||| |||| |||||||||| CTCACAAACT CCTTTCCACT TAGCAGGCGG GGGAGGCATC CCAACATCGC TAAATGAAGG 64 ATGGTCAGGA TAAATTCCAG TGTCTATAAC TCCGATGATC ACGCCTTTCC CATAGTTGGA 28467 ||| |||||| |||||||| |||||| ||| |||||||||| ||||||| | || | ||||| ATGATCAGGA AGAATTCCAG TGTCTAGAAC TCCGATGATC ACGCCTTCTC CAAAATTGGA 124 ATCCTTCCAC AAGCCCATGT TCTGTTGCAA ACCGAGAAAG TTCGGAGTAT GAGTAGTATG 28527 ||| |||||| |||||||||| |||| ||||| ||| ||||| | ||||||| ||||||| || ATCTTTCCAC AAGCCCATGT TCTGCTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTGTG 184 CAAGGTGAAA ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTATTCT CCATTTCCTT 28587 ||| | ||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CAAAGACAAA ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT 244 CACTTGTGCT GCTGTTAATC TTGCTGCAAA CCCTTTCATC ACATTGTGAT AGGAATAGAG 28647 ||||||| || || ||||||| |||||||||| |||| ||||| |||||||||| | ||||||| CACTTGTTCT GCAGTTAATC TTGCTGCAAA CCCTGTCATC ACATTGTGAT AAGAATAGAT 304 CATGCTAGCA GCCTCTTCAT TTTCACTTGA GCTGATT--- GTTGTAGTTT TAGGCAAAAA 28704 ||| ||||| |||||||||| || |||| || ||| ||| || ||||||| |||||||||| CATTGTAGCA GCCTCTTCAT TTCCACTAGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA 364 AGATAGATAA TAGTTATCTA AATCCGTTAC CGATGATTGT GTAGAAATTA CGCTTTCAGG 28764 ||| || ||| ||| |||||| ||||| ||| ||||||||| | || ||||| ||||||||| AGAAAGGTAA TAGCTATCTA AATCCATTAA CGATGATTGA GCAGTAATTA GGCTTTCAGG 424 AGATTCAACA TGGACTATAT AAGTCTCGAG ATCATTCTGA ATAGTAGGCC TTGGGAAAGA 28824 ||||||||| ||||| |||| |||||||||| || | ||||| |||||||||| |||||| || GGATTCAACA TGGACGATAT AAGTCTCGAG ATTACTCTGA ATAGTAGGCC ATGGGAATGA 484 ACAAAAGATG AAAACAAGAA ATATTTTCAA GAATCCCATG GCTGCTAATA CAAGAACTGA 28884 |||||||||| ||||||| || |||||||| |||||||||| ||||| |||| ||||| || ACAAAAGATG AAAACAAAAA GGATTTTCAA GAATCCCATG GCTGCAAATA TAAGAAGTGC 544 TTATGT 28890 | |||| TGATGT 550 hqPGS_C08HBa0165B06.1+_SGN-E207645- (28348 28890) ******************************************************************************** EST sequence 405 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 26105 to 31429): Exon 1 28353 28880 ( 528 n); cDNA 1 532 ( 532 n); score: 0.884 MATCH C08HBa0165B06.1+ SGN-E330205- 0.884 528 0.991 C PGS_C08HBa0165B06.1+_SGN-E330205- (28353 28880) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCA GGCGGAGGAG GCATCCCAAA GTCGCTAAAT GAAGGATGGT 28412 |||||||||| |||||||||| ||||| |||| ||||||||| |||||||| |||||||||| AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGATAAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 28472 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCACAAGCC CATGTTCTGT TGCAAACCGA GAAAGTTCGG AGTATGAGTA GTATGCAAGG 28532 |||| | || ||||||||| |||||||| | |||| | || |||||||||| || ||||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 TGAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT ATTCTCCATT TCCTTCACTT 28592 |||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTGCTGCTGT TAATCTTGCT GCAAACCCTT TCATCACATT GTGATAGGAA TAGAGCATGC 28652 || |||| || |||||||||| ||||||||| |||||||||| |||||||||| |||| |||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTTCA CTTGAGCTGA TTGT--T-GT AGTTTTAGGC AAAAAAGATA 28709 |||||||||| ||||||| || || || || | |||| | | |||||||||| |||||||| | TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GATAATAGTT ATCTAAATCC GTTACCGATG ATTGTGTAGA AATTACGCTT TCAGGAGATT 28769 | |||||| | | |||||||| |||| | ||| |||| |||| || || |||| ||||| |||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC TATATAAGTC TCGAGATCAT TCTGAATAGT AGGCCTTGGG AAAGAACAAA 28829 |||||||||| ||||||||| ||||||| | |||||||||| ||||| | || |||||||| | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAGAAATATT TTCAAGAATC CCATGGCT-G CTAATACAAG AA 28880 |||||||||| |||| ||| ||||| |||| |||||||| | ||||||||| || AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AA 532 hqPGS_C08HBa0165B06.1+_SGN-E330205- (28353 28880) ******************************************************************************** EST sequence 345 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 26695 to 31379): Exon 1 28412 28876 ( 465 n); cDNA 1 469 ( 469 n); score: 0.882 MATCH C08HBa0165B06.1+ SGN-E207387- 0.882 465 0.991 C PGS_C08HBa0165B06.1+_SGN-E207387- (28412 28876) Alignment (genomic DNA sequence = upper lines): TCAGGATAAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 28471 |||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCACAAGC CCATGTTCTG TTGCAAACCG AGAAAGTTCG GAGTATGAGT AGTATGCAAG 28531 ||||| | | |||||||||| |||||||| ||||| | | |||||||||| ||| ||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GTGAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TATTCTCCAT TTCCTTCACT 28591 | ||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTGCTGCTG TTAATCTTGC TGCAAACCCT TTCATCACAT TGTGATAGGA ATAGAGCATG 28651 ||| |||| | |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 CTAGCAGCCT CTTCATTTTC ACTTGAGCTG ATTGT--T-G TAGTTTTAGG CAAAAAAGAT 28708 ||||||||| |||||||| | ||| || || ||||| | | ||||||||| ||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGATAATAGT TATCTAAATC CGTTACCGAT GATTGTGTAG AAATTACGCT TTCAGGAGAT 28768 || |||||| || ||||||| ||||| | || ||||| |||| || || ||| |||||| ||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CTATATAAGT CTCGAGATCA TTCTGAATAG TAGGCCTTGG GAAAGAACAA 28828 |||||||||| | |||||||| |||||||| | ||||||||| |||||| | | ||||||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAGAAATAT TTTCAAGAAT CCCATGGCT- GCTAATACA 28876 |||||||||| |||||| || |||||| ||| ||||||||| ||||||||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA 469 hqPGS_C08HBa0165B06.1+_SGN-E207387- (28412 28876) ******************************************************************************** EST sequence 144 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 27322 to 29948): Exon 1 28420 28853 ( 434 n); cDNA 3 439 ( 437 n); score: 0.881 MATCH C08HBa0165B06.1+ SGN-E282403- 0.881 434 0.989 C PGS_C08HBa0165B06.1+_SGN-E282403- (28420 28853) Alignment (genomic DNA sequence = upper lines): AATTCCAGTG TCTATAACTC CGATGATCAC GCCTTTCCCA TAGTTGGAAT CCTTCCACAA 28479 |||||||||| |||| ||||| |||||||||| ||| ||| | ||||||| | |||||||| AATTCCAGTG TCTAGAACTC CGATGATCAC ACCTACTCCA AAATTGGAAT CTTTCCACAA 62 GCCCATGTTC TGTTGCAAAC CGAGAAAGTT CGGAGTATGA GTAGTATGCA AGGTGAAAAT 28539 |||||||||| |||||||||| | ||||| | ||||||||| |||||||||| ||| |||||| GCCCATGTTC TGTTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTATGCA AGGAGAAAAT 122 CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTATTCTCC ATTTCCTTCA CTTGTGCTGC 28599 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTGCTGC 182 TGTTAATCTT GCTGCAAACC CTTTCATCAC ATTGTGATAG GAATAGAGCA TGCTAGCAGC 28659 ||||||||| |||||||| | |||||||||| |||||| ||| || |||| || |||||||||| AGTTAATCTT GCTGCAAAAC CTTTCATCAC ATTGTGGTAG GAGTAGATCA TGCTAGCAGC 242 CTCTTCATTT TCACTTGAGC TGATT---GT TGTAGTTTTA GGCAAAAAAG ATAGATAATA 28716 |||||||| | |||| |||| | ||| || ||||||||| |||||||||| | || ||||| CTCTTCATCT CCACTCGAGC TAATTGCGGT AGTAGTTTTA GGCAAAAAAG AAAGGTAATA 302 GTTATCTAAA TCCGTTACCG ATGATTGTGT AGAAATTACG CTTTCAGGAG ATTCAACATG 28776 | | |||||| ||||||| | ||||||| || ||||||| | ||||||| | |||||||||| GCTCTCTAAA TCCGTTAATG ATGATTGAGT AGAAATTTGG TTTTCAGGTG ATTCAACATG 362 GACTATATAA GTCTCGAGAT CATTCTGAAT AGTAGGCCTT GGGAAAGAAC AAAAGATGAA 28836 |||||||||| |||||||||| || ||||||| | |||||||| ||||||| | |||| ||||| GACTATATAA GTCTCGAGAT CACTCTGAAT ACTAGGCCTT AGGAAAGAGC AAAATATGAA 422 AACAAGAAAT ATTTTCA 28853 | ||||| ||||||| GATAAGAAGA ATTTTCA 439 hqPGS_C08HBa0165B06.1+_SGN-E282403- (28420 28853) ******************************************************************************** EST sequence 2 +strand 709 n (File: SGN-E376168+) 1 CGGGCAGGTC AGAAAAACAC TCCTGGATCC GACAAGCCTG CATTTACTTC TGAAGAAGTA 61 TATGTAAAGG TTTTTGATCT TCAAGACAAG GTTAACAAGG TAAATAAAAT ACCAAAGCCA 121 AAGCCTAAGG TTGAGAAGCC TTTGAAAAAT GAAACTGAAA ACAGCAAGGA GAAAGCAGAC 181 ACTACCAAAT CCTCTTCTGA GGAGGGTACC TCCCAGAAAG AACAAACAGC TTCAGAGGCA 241 GAGAAGCCAT CTGCAGATGA AAACTCGGAT CATGATGAGT TATGATTATT ATCCTACAAC 301 GATACATTGA AGGCTAGATA TATGCAAATT GCCAAGAGGA AGAGACGGAA ACTTAATTTG 361 TAGAGTATAT ACTGAGTGAA ACCATAGGAT GCTTTTTCTT GCCATGCTTT GGAAGTCCCC 421 ACTCTCCGGG CTGTCTCGGG TTCAAATAGT ACCTCGGGGC CGAGGTACAA GCTTTTTCTT 481 TTTTTTTTTT TTTTTTTTGT TTTATTGTTT TAACAATGAA AAAAGTAACA GAACGTTTAT 541 TGTGTAATCA AACAGCATTT TCAAATGTTT GAATACTTTG TGCACTTACT TAGCCAATGC 601 CAACACAACT GCAATTGGAC TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC 661 CTCAACAACC CCAGACATTG AGCTGTTAAT TGTCTTGGAA AATGTCACT Predicted gene structure (within gDNA segment 24660 to 31078): Exon 1 29767 29787 ( 21 n); cDNA 480 500 ( 21 n); score: 0.857 Intron 1 29788 30259 ( 472 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 30260 30468 ( 209 n); cDNA 501 709 ( 209 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E376168+ 1.000 230 0.324 C PGS_C08HBa0165B06.1+_SGN-E376168+ (29767 29787,30260 30468) Alignment (genomic DNA sequence = upper lines): TTCTTTTTTT TCTTTTTTTG AAAATTATAA CAAAACAAAA TATGTATTGG TTAATTTCAT 29826 || ||||||| | |||||||| TTTTTTTTTT TTTTTTTTTG T......... .......... .......... .......... 500 TTCTTTGCAA GACAATATGT ACCATGGATG ATGTACATTA GTCCCCTTCA ATAATATGTT 29886 .......... .......... .......... .......... .......... .......... 500 AAAAAATAAA AGTTCAATCG ATTTCTAGGA AATTCATAGG ATATGTCTCC ATTATTTTAA 29946 .......... .......... .......... .......... .......... .......... 500 TTGTCCTATT AATAATTTTA GCATTGACGT CACAATTACT TTTTGAAGTC ACCAAAGACT 30006 .......... .......... .......... .......... .......... .......... 500 AAGACTTTAT ATTTGAAGTC ACTGTCAATA TTCTGGATCA AAGGGTGTGT TATTATGTAG 30066 .......... .......... .......... .......... .......... .......... 500 GTGACAACAA ATTTCCCAAA TTTAAGTATG AACTGAGATT CTTACTCGGT CACTTAACTA 30126 .......... .......... .......... .......... .......... .......... 500 ATATTTATTA TCTCGAGAAG TCACTTTATT TGTCGAACAA AAATGAAATC AAGAAGAAAA 30186 .......... .......... .......... .......... .......... .......... 500 GTTAAGCAGA GCAAGGACAC TAATATCAAA GAGGATATGC TTTTGCTTTC TTCAATCAGC 30246 .......... .......... .......... .......... .......... .......... 500 TGTGAACATA AAGTTTATTG TTTTAACAAT GAAAAAAGTA ACAGAACGTT TATTGTGTAA 30306 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ...TTTATTG TTTTAACAAT GAAAAAAGTA ACAGAACGTT TATTGTGTAA 547 TCAAACAGCA TTTTCAAATG TTTGAATACT TTGTGCACTT ACTTAGCCAA TGCCAACACA 30366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAACAGCA TTTTCAAATG TTTGAATACT TTGTGCACTT ACTTAGCCAA TGCCAACACA 607 ACTGCAATTG GACTTCTCAC AGAGTGCCTG TTAGAATTCC ACTTCAAGAA TCCCTCAACA 30426 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGCAATTG GACTTCTCAC AGAGTGCCTG TTAGAATTCC ACTTCAAGAA TCCCTCAACA 667 ACCCCAGACA TTGAGCTGTT AATTGTCTTG GAAAATGTCA CT 30468 |||||||||| |||||||||| |||||||||| |||||||||| || ACCCCAGACA TTGAGCTGTT AATTGTCTTG GAAAATGTCA CT 709 hqPGS_C08HBa0165B06.1+_SGN-E376168+ (29767 29787,30260 30468) ******************************************************************************** EST sequence 42 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 28396 to 34115): Exon 1 30360 30754 ( 395 n); cDNA 132 523 ( 392 n); score: 0.853 Intron 1 30755 31019 ( 265 n); Pd: 0.293 (s: 0.92), Pa: 0.000 (s: 0.86) Exon 2 31020 31295 ( 276 n); cDNA 524 799 ( 276 n); score: 0.826 PPA cDNA 31 13 MATCH C08HBa0165B06.1+ SGN-E548357+ 0.842 671 0.840 C PGS_C08HBa0165B06.1+_SGN-E548357+ (30360 30754,31020 31295) Alignment (genomic DNA sequence = upper lines): CAACACAACT GCAATTGGAC TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC 30419 || |||| |||||||||| |||| ||||| |||||| ||| |||||||||| |||| ||||| CACTCTAACT GCAATTGGAC TTCTTACAGA GTGCCTATTA GAATTCCACT TCAAAAATCC 191 CTCAACAACC CCAGACATTG AGCTGTTAAT TGTCTTGGAA AATGTCACTT GGTATGTTAG 30479 ||||||| | | | ||| || | ||| | |||||||| | ||| |||||| | ||||| | CTCAACATCA CTGGTAGTTG AGATATTAGT TGTCTTGGTA AATATCACTT GATATGTCAA 251 CTTCTGGTTC AACTCCGAGA AATTTAGCTT GCTGGGCTTA ACTTTCACGA CAACGCCTTT 30539 |||||||||| ||| |||| |||||||| | ||| | | |||||||||| |||| ||||| CTTCTGGTTC AACGTTGAGA AATTTAGCGC GGAGGGTTCA ACTTTCACGA CAACTCCTTT 311 AGGTGAAGCT ATCTGCACCG TGTAAGATGA TTTGGCATCA CCAACATTGG TCACAGTTCT 30599 |||||| || |||| ||| |||||||||| ||| |||||| |||||||||| | || ||||| TGGTGAAACT ATCTCCACTT TGTAAGATGA TTTAGCATCA CCAACATTGG TTACGGTTCT 371 GGTGTATGTC TGAGGAGTTG ATCCAAGTCT CGATATGCAA AATGAAGGAT AGTTTAATTG 30659 ||| |||||| |||||||||| |||||||||| | ||| || |||||||||| | |||| ||| GGTATATGTC TGAGGAGTTG ATCCAAGTCT -G--ATGGAA AATGAAGGAT AATTTAGTTG 428 TGCTTCAGGG ATACTTTCAA CCTCCGAGCA ATTCACCCTG CGTCGTAACA ATTTACCTAC 30719 |||||||| |||| || | |||||||||| ||||||| || ||| |||||| ||||||||| CCCTTCAGGG ATACGTTTTA CCTCCGAGCA ATTCACCTTG CGTTGTAACA CTTTACCTAC 488 CTGTGGATTT GTGTAGTTCA AACCACATAA ATAAGGTACA TAATCCTCAA ATGGGGTATC 30779 || ||||| |||||||||| |||||||||| ||||| CTCCCGATTT GTGTAGTTCA AACCACATAA ATAAG..... .......... .......... 523 ATAAACTAGT CCTGGATCAT TTGCCCTCGA TGGATTAACA TGTCCTGCAC CTATTGCATA 30839 .......... .......... .......... .......... .......... .......... 523 GATATCAGCA GGACGGAGCC TTTGGTCGAG TATTGGACTA CTGGCAAGGT TTAATGTGTC 30899 .......... .......... .......... .......... .......... .......... 523 AGCGGTTGTC ATCATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTTCTCTT 30959 .......... .......... .......... .......... .......... .......... 523 CAGCAGAGCT GCTACCCCAC TAAGGTGTGG GCAAGACATC GAGGTGCCTG ATATAATATT 31019 .......... .......... .......... .......... .......... .......... 523 GAATGTGGAT TTGGTGTCCT TGTTGTCATC CACAGAAGTA GGCCAAGCAG CGAGGATATT 31079 |||||| ||| || |||| | |||||| ||| ||| || ||| |||||||||| | |||| || GAATGTTGAT TTTGTGTTTT TGTTGTTATC CACGGAGGTA GGCCAAGCAG CAAGGACGTT 583 AACACCAGGA CCAATTATGT CAGGTTTCAA GATCCCAGGA TTAGGTTTAC TTGGTCCGCG 31139 |||||||||| || ||||||| ||||||| || ||| |||||| | | | | ||||||| || AACACCAGGA CCGATTATGT CAGGTTTTAA GATGCCAGGA CTTGCTACGC TTGGTCCTCG 643 AGAAGAAAAT GCAGCAACTA TTGGAGCATT TTTATCTCCA ATTACTGTTC CTTGGATTGT 31199 || |||||| | |||||||| | |||||||| ||| |||||| ||||| |||| | |||| || TGAGGAAAAT GAAGCAACTA TAGGAGCATT TTTGTCTCCA ATTACAGTTC CATGGAAGGT 703 GATTGTAGCA ACAGGGTTCG ATATTGAGTT TGTATAGGCA CGAATTTTGC TTCCATCTGC 31259 ||||| |||| || || || | | |||||| |||||||| ||||||| ||||||| || GATTGAAGCA ACCGGATTTG AAGATGAGTT CATATAGGCA AGAATTTTCT TTCCATCAGC 763 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATC 31295 | ||||||| ||||||| | |||| ||||| ||| || ATTTGAAACA TCCAATGCAG GAAGGACATG AGCTTC 799 hqPGS_C08HBa0165B06.1+_SGN-E548357+ (30360 30754,31020 31295) ******************************************************************************** EST sequence 316 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 29154 to 32118): Exon 1 30359 30744 ( 386 n); cDNA 56 441 ( 386 n); score: 0.848 PPA cDNA 11 1 MATCH C08HBa0165B06.1+ SGN-E307529- 0.848 386 0.875 C PGS_C08HBa0165B06.1+_SGN-E307529- (30359 30744) Alignment (genomic DNA sequence = upper lines): CCAACACAAC TGCAATTGGA CTTCTCACAG AGTGCCTGTT AGAATTCCAC TTCAAGAATC 30418 |||| ||||| |||||||||| |||||||||| ||||||| | |||| ||||| |||||||||| CCAATACAAC TGCAATTGGA CTTCTCACAG AGTGCCTAGT AGAAGTCCAC TTCAAGAATC 115 CCTCAACAAC CCCAGACAT- TGAGCTGTTA ATTGTCTTGG AAAATGTCAC TTGGTATGTT 30477 |||||||||| | || || | ||| ||| | ||||||||| |||||||||| |||||||||| CCTCAACAAC CACA-ACTTC TGAACTGCTG GTTGTCTTGG AAAATGTCAC TTGGTATGTT 174 AGCTTCTGGT TCAACTCCGA GAAATTTAGC TTGCTGGGCT TAACTTTCAC GACAACGCCT 30537 | |||||||| |||||| || ||||||||| | |||| ||||| | | |||| ||| AACTTCTGGT TCAACTTGGA GAAATTTAGT TCTGTGGGTA CAACTTCTAT GGCAACTCCT 234 TTAGGTGAAG CTATCTGCAC CGTGTAAGAT GATTTGGCAT CACCAACATT GGTCACAGTT 30597 ||||||||| |||||| ||| |||||||| ||| ||| ||||||| || |||||||||| ATAGGTGAAG CTATCTCCAC TTTGTAAGAT GATGCAACAT CACCAACGTT GGTCACAGTT 294 CTGGTGTATG TCTGAGGAGT TGATCCAAGT CTCGATATGC AAAATGAAGG ATAGTTTAAT 30657 || ||||||| |||||||||| |||||||||| | ||||| |||| ||||| |||||||||| CTTGTGTATG TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT 354 TGTGCTTCAG GGATACTTTC AACCTCCGAG CAATTCACCC TGCGTCGTAA CAATTTACCT 30717 | |||||||| ||||||| | || || || ||||| ||| ||||| |||| || ||||| | TCTGCTTCAG GGATACTCTT TACTTCTAAG CAATTTACCT TGCGTTGTAA CAGTTTACTT 414 ACCTGTGGAT TTGTGTAGTT CAAACCA 30744 ||||||| || ||||||| | ||||||| ACCTGTGCAT TTGTGTACCT CAAACCA 441 hqPGS_C08HBa0165B06.1+_SGN-E307529- (30359 30744) ******************************************************************************** EST sequence 135 +strand 450 n (File: SGN-E237320+) 1 TTTTTTTTTT TTTTTTTGAC ATAAAACATA TACTGGAAAA AAAAAACAGC AATCCAATAT 61 GATTAATTGT GAATAATTTC TGCACTTATT TTTACATTTT AGATTGAAAG CATTTTAGTT 121 TTATTCAGCA GACACTCTAA CTGCAATTGG ACTTCTTACA GAGTGCCTAT TAGAATTCCA 181 CTTCAAAAAT CCCTCAACAT CACTGGTAGT TGAGATATTA GTTGTCTTGG TAAATATCAC 241 TTGATATGTC AACTTCTGGT TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC 301 GACAACTCCT TTTGGTGAAA CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT 361 GGTTACGGTT CTGGTATATG TCTGAGGAGT TGATCCAAGT CTGATGGAAA ATGAAGGATA 421 ATTTAGTTGC CCTTAGGGAT ACGTTTTACC Predicted gene structure (within gDNA segment 28386 to 31719): Exon 1 30360 30681 ( 322 n); cDNA 133 450 ( 318 n); score: 0.835 PPA cDNA 17 1 MATCH C08HBa0165B06.1+ SGN-E237320+ 0.835 322 0.716 C PGS_C08HBa0165B06.1+_SGN-E237320+ (30360 30681) Alignment (genomic DNA sequence = upper lines): CAACACAACT GCAATTGGAC TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC 30419 || |||| |||||||||| |||| ||||| |||||| ||| |||||||||| |||| ||||| CACTCTAACT GCAATTGGAC TTCTTACAGA GTGCCTATTA GAATTCCACT TCAAAAATCC 192 CTCAACAACC CCAGACATTG AGCTGTTAAT TGTCTTGGAA AATGTCACTT GGTATGTTAG 30479 ||||||| | | | ||| || | ||| | |||||||| | ||| |||||| | ||||| | CTCAACATCA CTGGTAGTTG AGATATTAGT TGTCTTGGTA AATATCACTT GATATGTCAA 252 CTTCTGGTTC AACTCCGAGA AATTTAGCTT GCTGGGCTTA ACTTTCACGA CAACGCCTTT 30539 |||||||||| ||| |||| |||||||| | ||| | | |||||||||| |||| ||||| CTTCTGGTTC AACGTTGAGA AATTTAGCGC GGAGGGTTCA ACTTTCACGA CAACTCCTTT 312 AGGTGAAGCT ATCTGCACCG TGTAAGATGA TTTGGCATCA CCAACATTGG TCACAGTTCT 30599 |||||| || |||| ||| |||||||||| ||| |||||| |||||||||| | || ||||| TGGTGAAACT ATCTCCACTT TGTAAGATGA TTTAGCATCA CCAACATTGG TTACGGTTCT 372 GGTGTATGTC TGAGGAGTTG ATCCAAGTCT CGATATGCAA AATGAAGGAT AGTTTAATTG 30659 ||| |||||| |||||||||| |||||||||| | ||| || |||||||||| | |||| ||| GGTATATGTC TGAGGAGTTG ATCCAAGTCT -G--ATGGAA AATGAAGGAT AATTTAGTTG 429 TGCTTCAGGG ATACTTTCAA CC 30681 ||| |||| |||| || | || CCCTT-AGGG ATACGTTTTA CC 450 hqPGS_C08HBa0165B06.1+_SGN-E237320+ (30360 30681) ******************************************************************************** EST sequence 340 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 29774 to 31557): Exon 1 30384 30957 ( 574 n); cDNA 1 574 ( 574 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E207413- 1.000 574 1.000 C PGS_C08HBa0165B06.1+_SGN-E207413- (30384 30957) Alignment (genomic DNA sequence = upper lines): CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 30443 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 30503 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 30563 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 30623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 30683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 300 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 30743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 360 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 30803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 420 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 30863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 480 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 30923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 540 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC 30957 |||||||||| |||||||||| |||||||||| |||| AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC 574 hqPGS_C08HBa0165B06.1+_SGN-E207413- (30384 30957) ******************************************************************************** EST sequence 107 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 29114 to 34092): Exon 1 30488 30930 ( 443 n); cDNA 1 443 ( 443 n); score: 0.892 MATCH C08HBa0165B06.1+ SGN-E287935+ 0.892 443 0.899 C PGS_C08HBa0165B06.1+_SGN-E287935+ (30488 30930) Alignment (genomic DNA sequence = upper lines): TCAACTCCGA GAAATTTAGC TTGCTGGGCT TAACTTTCAC GACAACGCCT TTAGGTGAAG 30547 ||||||| || |||||||||| | | ||| | ||||| | | |||||||| | ||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTATCTGCAC CGTGTAAGAT GATTTGGCAT CACCAACATT GGTCACAGTT CTGGTGTATG 30607 ||| || ||| |||||||| ||| | |||| |||||||||| ||| |||||| ||||| |||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGT CTCGATATGC AAAATGAAGG ATAGTTTAAT TGTGCTTCAG 30667 |||||||||| |||||||||| | ||||| |||| ||||| |||||||||| ||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATACTTTC AACCTCCGAG CAATTCACCC TGCGTCGTAA CAATTTACCT ACCTGTGGAT 30727 ||||||||| ||||||||| |||||||||| ||||| ||| || |||||| |||||| ||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA TCATAAACTA 30787 |||||| || |||||||||| |||||||||| |||| ||||| ||||| ||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA TAGATATCAG 30847 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| ||||| |||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG TCAGCGGTTG 30907 ||||| |||| ||||| ||| |||||||||| || | ||||| |||||| ||| ||||| |||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATCATTGC AGACTTAATA ACA 30930 |||||||||| |||||||||| ||| TCATCATTGC AGACTTAATA ACA 443 hqPGS_C08HBa0165B06.1+_SGN-E287935+ (30488 30930) ******************************************************************************** EST sequence 413 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 30105 to 34900): Exon 1 30769 31177 ( 409 n); cDNA 1 409 ( 409 n); score: 0.834 MATCH C08HBa0165B06.1+ SGN-E317658- 0.834 409 1.000 C PGS_C08HBa0165B06.1+_SGN-E317658- (30769 31177) Alignment (genomic DNA sequence = upper lines): AATGGGGTAT CATAAACTAG TCCTGGATCA TTTGCCCTCG ATGGATTAAC ATGTCCTGCA 30828 ||||| |||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCTATTGCAT AGATATCAGC AGGACGGAGC CTTTGGTCGA GTATTGGACT ACTGGCAAGG 30888 || |||||| ||| |||||| | | |||| |||| ||| | |||||||||| || ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAATGTGT CAGCGGTTGT CATCATTGCA GACTTAATAA CAGCAGGAGA CCAATCAGGA 30948 |||| ||||| |||| ||||| ||||||||| |||||||| | |||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGTTCTCT TCAGCAGAGC TGCTACCCCA CTAAGGTGTG GGCAAGACAT CGAGGTGCCT 31008 |||| || | |||||||||| ||| || ||| |||||||| | ||||| |||| ||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATAATAT TGAATGTGGA TTTGGTGTCC TTGTTGTCAT CCACAGAAGT AGGCCAAGCA 31068 |||| |||| ||||||| || ||| |||| ||||||| || |||| || || |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCGAGGATAT TAACACCAGG ACCAATTATG TCAGGTTTCA AGATCCCAGG ATTAGGTTTA 31128 || |||| | |||||||||| ||| |||||| |||||||| | |||| ||||| | | | GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCGC GAGAAGAAAA TGCAGCAACT ATTGGAGCAT TTTTATCTC 31177 |||||||| | | | ||| || |||| || || ||||||| |||| |||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1+_SGN-E317658- (30769 31177) ******************************************************************************** EST sequence 403 -strand 575 n (File: SGN-E301194-) 1 CATTCATAGA AAACTAAATT AAGAAGTCTA ACAGAGTGAA AAAAAAGACT AAAAGAAACA 61 GAATATTTAA GAAAAAAATA CAATATAGAC ATTATTCTTA TAAGATTGAT GTATATATAG 121 ATGAAAAAAT AAGTAAAAAT TAGTACATAA CTCTCTGAGT TTTTATCGAC TCCTTTCATA 181 TCCTATCAAA ATTCAAGAGT TTTCAGCATC TATTTTTACT ATAGAATAAA AATAATAATC 241 TTGATAGGGG TTTCATGAGA TAAAGAAGTT GAATTTATAC AAATAGAATA GAAGGAATAC 301 CAAAAGATTT CTTAAAGTTT AATTTAAATA TTTGGAGGTT ATGAATATGA AAAGATGATA 361 GTTATGAATA TTAAGAGTGT TGTGCGAAAT TTGAGATAAT ACGAGAAAAT ATATAAACGC 421 GAAAAACAAG ACAACAGATT TACGTGGTTC ACCAATAAAT TGGCTACGTC CACGGGAAGA 481 GAGGGAGCAA TTTTATTATG GAGAGGCAAA AACAGAATTA CAGAATAGGG TTTGCCATAG 541 CGTCTATATA TAGTGCTAAG CTACGCCCTA AAAGG Predicted gene structure (within gDNA segment 28925 to 35735): Exon 1 30071 30091 ( 21 n); cDNA 301 322 ( 22 n); score: 0.690 Intron 1 30092 31524 (1433 n); Pd: 0.147 (s: 0), Pa: 0.000 (s: 0) Exon 2 31525 31545 ( 21 n); cDNA 323 342 ( 20 n); score: 0.714 Intron 2 31546 33542 (1997 n); Pd: 0.000 (s: 0), Pa: 0.794 (s: 0) Exon 3 33543 33556 ( 14 n); cDNA 343 354 ( 12 n); score: 0.786 Intron 3 33557 34015 ( 459 n); Pd: 0.995 (s: 0), Pa: 0.000 (s: 0.74) Exon 4 34016 34072 ( 57 n); cDNA 355 410 ( 56 n); score: 0.781 Intron 4 34073 34634 ( 562 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.98) Exon 5 34635 34798 ( 164 n); cDNA 411 575 ( 165 n); score: 0.942 MATCH C08HBa0165B06.1+ SGN-E301194- 0.900 277 0.482 C PGS_C08HBa0165B06.1+_SGN-E301194- (30071 30091,31525 31545,33543 33556,34016 34072,34635 34798) Alignment (genomic DNA sequence = upper lines): CAACAAATTT CCCAAA-TTT AAGTATGAAC TGAGATTCTT ACTCGGTCAC TTAACTAATA 30129 ||| | |||| | ||| ||| || CAAAAGATTT CTTAAAGTTT AA........ .......... .......... .......... 322 TTTATTATCT CGAGAAGTCA CTTTATTTGT CGAACAAAAA TGAAATCAAG AAGAAAAGTT 30189 .......... .......... .......... .......... .......... .......... 322 AAGCAGAGCA AGGACACTAA TATCAAAGAG GATATGCTTT TGCTTTCTTC AATCAGCTGT 30249 .......... .......... .......... .......... .......... .......... 322 GAACATAAAG TTTATTGTTT TAACAATGAA AAAAGTAACA GAACGTTTAT TGTGTAATCA 30309 .......... .......... .......... .......... .......... .......... 322 AACAGCATTT TCAAATGTTT GAATACTTTG TGCACTTACT TAGCCAATGC CAACACAACT 30369 .......... .......... .......... .......... .......... .......... 322 GCAATTGGAC TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC CTCAACAACC 30429 .......... .......... .......... .......... .......... .......... 322 CCAGACATTG AGCTGTTAAT TGTCTTGGAA AATGTCACTT GGTATGTTAG CTTCTGGTTC 30489 .......... .......... .......... .......... .......... .......... 322 AACTCCGAGA AATTTAGCTT GCTGGGCTTA ACTTTCACGA CAACGCCTTT AGGTGAAGCT 30549 .......... .......... .......... .......... .......... .......... 322 ATCTGCACCG TGTAAGATGA TTTGGCATCA CCAACATTGG TCACAGTTCT GGTGTATGTC 30609 .......... .......... .......... .......... .......... .......... 322 TGAGGAGTTG ATCCAAGTCT CGATATGCAA AATGAAGGAT AGTTTAATTG TGCTTCAGGG 30669 .......... .......... .......... .......... .......... .......... 322 ATACTTTCAA CCTCCGAGCA ATTCACCCTG CGTCGTAACA ATTTACCTAC CTGTGGATTT 30729 .......... .......... .......... .......... .......... .......... 322 GTGTAGTTCA AACCACATAA ATAAGGTACA TAATCCTCAA ATGGGGTATC ATAAACTAGT 30789 .......... .......... .......... .......... .......... .......... 322 CCTGGATCAT TTGCCCTCGA TGGATTAACA TGTCCTGCAC CTATTGCATA GATATCAGCA 30849 .......... .......... .......... .......... .......... .......... 322 GGACGGAGCC TTTGGTCGAG TATTGGACTA CTGGCAAGGT TTAATGTGTC AGCGGTTGTC 30909 .......... .......... .......... .......... .......... .......... 322 ATCATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTTCTCTT CAGCAGAGCT 30969 .......... .......... .......... .......... .......... .......... 322 GCTACCCCAC TAAGGTGTGG GCAAGACATC GAGGTGCCTG ATATAATATT GAATGTGGAT 31029 .......... .......... .......... .......... .......... .......... 322 TTGGTGTCCT TGTTGTCATC CACAGAAGTA GGCCAAGCAG CGAGGATATT AACACCAGGA 31089 .......... .......... .......... .......... .......... .......... 322 CCAATTATGT CAGGTTTCAA GATCCCAGGA TTAGGTTTAC TTGGTCCGCG AGAAGAAAAT 31149 .......... .......... .......... .......... .......... .......... 322 GCAGCAACTA TTGGAGCATT TTTATCTCCA ATTACTGTTC CTTGGATTGT GATTGTAGCA 31209 .......... .......... .......... .......... .......... .......... 322 ACAGGGTTCG ATATTGAGTT TGTATAGGCA CGAATTTTGC TTCCATCTGC AGCTGAAACA 31269 .......... .......... .......... .......... .......... .......... 322 ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG TGATGGGTTG 31329 .......... .......... .......... .......... .......... .......... 322 ATGACAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC AACATTGGCT 31389 .......... .......... .......... .......... .......... .......... 322 ACACCGCCGA ATGCTAAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC AGTGAGTGAC 31449 .......... .......... .......... .......... .......... .......... 322 CCTCGTCTGC AATAAGGGGT TTCAGATGGA TCTTTTGCAT TTTTTGCAGC ATCAAATAGA 31509 .......... .......... .......... .......... .......... .......... 322 GTGAAGAATG TTGAGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC AAATTCCTCT 31569 || | ||| |||||| | || .......... .....TT-TA AATATTTGGA GGTTAT.... .......... .......... 342 CCATTTCCGA GCTTAGCAGT AGCTTTTATC TTTCTATCAA GCGTGCTGGC ACCTACTGTA 31629 .......... .......... .......... .......... .......... .......... 342 AGAATCCAAG GGGCTGAGTT ATCTACTGAG GCAGGCGAAG GACCATTATT GCCTGCTGAG 31689 .......... .......... .......... .......... .......... .......... 342 CAACTAACAA GAATGCCTCT TTGTGTTGCA CTGTACGCCC CGAGAGCAAT ACTTTCATCA 31749 .......... .......... .......... .......... .......... .......... 342 TAAAGAGGTC TCAGAGATCC ACCAATGGAT ATAGAAAGAA TATCTACTCC ATCATCTATA 31809 .......... .......... .......... .......... .......... .......... 342 GCTGAATCCA TGGCAGCTAA AATATCACTG TCAGAACAAC CAACAGAGTT ACACACCTTA 31869 .......... .......... .......... .......... .......... .......... 342 TATATGGCTA TATGGGCAAG AGGAGCAACA CCAACTGCAG TTCCATTAGC ATTTTCATAT 31929 .......... .......... .......... .......... .......... .......... 342 ACATTAGCAC CTTTCACAAA AGCCCCCGCA GCTGTGCTTG CTGTGTGTGT ACCATGTCCA 31989 .......... .......... .......... .......... .......... .......... 342 TCATCGTCTA TCGGGGAACC ATTGCCAAGT TTGTAAGACC TGGCTCCAAT GAGCTTGTTG 32049 .......... .......... .......... .......... .......... .......... 342 TTACACTTGT TGGTGAAATT GGGCTCACAA ACTCCTTTCC ACTTAGCAGG CGGGGGAGGC 32109 .......... .......... .......... .......... .......... .......... 342 ATCCCAACAT CGCTAAATGA AGGATGATCA GGAAGAATTC CAGTGTCTAG AACTCCGATG 32169 .......... .......... .......... .......... .......... .......... 342 ATCACGCCTT CTCCAAAATT GGAATCTTTC CACAAGCCCA TGTTCTGCTG CAAACCAAGA 32229 .......... .......... .......... .......... .......... .......... 342 AAACTTGGAG TATGAGTAGT GTGCAAAGAC AAAATCCTCT GTTTCTGAGC AGAGACAAAG 32289 .......... .......... .......... .......... .......... .......... 342 CCGTGTTTTT TCTCCATTTC CTTCACTTGT TCTGCAGTTA ATCTTGCTGC AAACCCTGTC 32349 .......... .......... .......... .......... .......... .......... 342 ATCACATTGT GATAAGAATA GATCATTGTA GCAGCCTCTT CATTTCCACT AGAGCTAATT 32409 .......... .......... .......... .......... .......... .......... 342 GCGGTAGTAG TTTTAGGCAA AAAAGAAAGG TAATAGCTAT CTAAATCCAT TAACGATGAT 32469 .......... .......... .......... .......... .......... .......... 342 TGAGCAGTAA TTAGGCTTTC AGGGGATTCA ACATGGACGA TATAAGTCTC GAGATTACTC 32529 .......... .......... .......... .......... .......... .......... 342 TGAATAGTAG GCCATGGGAA TGAACAAAAG ATGAAAACAA AAAGGATTTT CAAGAATCCC 32589 .......... .......... .......... .......... .......... .......... 342 ATGGCTGCAA ATATAAGAAG TGCTGATGTA TTTGGACAGT GTATTTGATG AATTTTTCTG 32649 .......... .......... .......... .......... .......... .......... 342 CTTTTGAAGC AACTCTCTAT TTATAGTGTT TTATTATTGA CCTATTCAAC TTCTAGAAAA 32709 .......... .......... .......... .......... .......... .......... 342 ATTATTGTGG AAAAAAGACC ATGTGTATGA ACAAAATTAT CACTTCTAGT GTCAGAAAAT 32769 .......... .......... .......... .......... .......... .......... 342 TATATTCTAT AGTTTTATTT TCCAAATGAC ATCCACTATA ATATATTTAA TGTTAAACAA 32829 .......... .......... .......... .......... .......... .......... 342 TCACTTTGTT ATAAAAAAAG TTGCAAGTGT TCGAAAACAT GCAGCTATTT CGGATCCTTC 32889 .......... .......... .......... .......... .......... .......... 342 TTGGAAGAGT AAACATCCAT TCAAGGATTT AAAACTAAAA TTTGCAGATA TATAATATAT 32949 .......... .......... .......... .......... .......... .......... 342 GTACCTAGTC TATGAATAAT AAGTGTAAAA TAGTGAAAAG TATTAGTATT ATTCTTCTTT 33009 .......... .......... .......... .......... .......... .......... 342 AATTTCTTTT ATCCCTAAAA GGAAAATCGC TCAAATTTGT TAATGAACTT TAGGAAAAAA 33069 .......... .......... .......... .......... .......... .......... 342 GCTCATTTTA TAACATCTGT TAAAAGTTTG AATTATCTAT GTCATTTTCG ATTGAGAAAA 33129 .......... .......... .......... .......... .......... .......... 342 GGCACATCGA TGCACTTGAA TGTGATAAAA GAACATTAGA AACATGCCAC ATTCAATAGA 33189 .......... .......... .......... .......... .......... .......... 342 GGTATACCAA GGTGAAAGTA GGTACTTTCT AATGCGAGAA CCATCCGAGA AATAAAACTG 33249 .......... .......... .......... .......... .......... .......... 342 AAATTATCTA ATTACATAAA TATTTCTATA ATATTTACTA GTTTTCTTTA TAGTTTGAAA 33309 .......... .......... .......... .......... .......... .......... 342 TAATTATGTA TATATAGTTT CACTAATTTA CAGTTTCATT ACAGATATTA AGTCAGATAC 33369 .......... .......... .......... .......... .......... .......... 342 ACTAATCTAT ATATATATAT ATATATATAT ATATATATAT GTATTTTTGC TACCAAATAA 33429 .......... .......... .......... .......... .......... .......... 342 AAAAAATAGT GAGAAATACG AGCGAAAAAA AGAAAGAGGC GACCGAAATA CCCAAATATA 33489 .......... .......... .......... .......... .......... .......... 342 TGTGACTCAT CCCCATAAAC ATCATGAAAA TCGTATTAAC TACATGTCTA CAGGAGATAA 33549 || ||| .......... .......... .......... .......... .......... ...GA-ATAT 348 GAAAGAGGCG AGTGAGATAA TCACATACAT GTCAATCGAT AGAAAATTAC ACTTAATTTA 33609 |||| || GAAA-AG... .......... .......... .......... .......... .......... 354 AATTTTAACT TCATATATTA TTTGAACTTC TAAACTATTA TTATCATAAT AATTTCTCGT 33669 .......... .......... .......... .......... .......... .......... 354 ATAATTGGCG TATACTAATC ATCAAACTCA TTTACCTAAC AAAAGTTGAC CCAAGACTTA 33729 .......... .......... .......... .......... .......... .......... 354 ATATCCCAAC ACAACTTAAA CTTTTATTTA TTTTGTGTTG TGTTTTTATA TGTGGAAATC 33789 .......... .......... .......... .......... .......... .......... 354 CATATTTATC TATTTATTCC TTTGAATTAC TGCAGAAATT CCTAGAGAAA ATTGGCACTA 33849 .......... .......... .......... .......... .......... .......... 354 CATTTCAGTC CACTTGATTA CTTGTGGGGG CACCAAAGGA CCAACAGGGG CTGCTAGAAA 33909 .......... .......... .......... .......... .......... .......... 354 AAAATATTGT CTTTACATGT GGAAATCCAA GGAATAAAAC TGATAGTGGA TAGATATATA 33969 .......... .......... .......... .......... .......... .......... 354 ATATACTCAC ATTCGTCCCA TTTTATATGA CATTATTTGA CCTGACA-CA TAGTTCAAAA 34028 | | ||||| || .......... .......... .......... .......... ......ATGA TAGTTATGAA 368 AATAAATGAA ATGTTGTGCG AAATTCGAGA TAATACGAGA AAATATAAAC GCGAAAAACA 34088 || || | | ||||||||| ||||| |||| |||||||||| |||| TATTAA-G-A GTGTTGTGCG AAATTTGAGA TAATACGAGA AAAT...... .......... 410 AGACAATAGA TTTACGTGGT TCACCAATAA GTTGGCTACG TCCACGGAAA GAGGGGAGCA 34148 .......... .......... .......... .......... .......... .......... 410 GTTTTATTAT GGAAAGGCAA AAATAGAATT ACAGAATAGG GTTTGTCATA GCGTCTATAT 34208 .......... .......... .......... .......... .......... .......... 410 ATAGTGCTAA GCTATGCCCT AACAGGCTTG GGCCCAAAAT ACATAATTGA CAGATAACTA 34268 .......... .......... .......... .......... .......... .......... 410 AGGGCTCAAT TCAAGGCATT CAACAAATCT CCACCTTGAC TTGAATTCTC CAAACAGATT 34328 .......... .......... .......... .......... .......... .......... 410 CTTCAGACGC ACTATGATAG TGCCAGGCCT CCCCCTCTTC CTCAGAATTG CCCCGCAGGG 34388 .......... .......... .......... .......... .......... .......... 410 CAATTAACAG CTTCTGATGT TGAGCAAGTC CAAACAGTGT TGAAACTTGC TCTGTGGAAC 34448 .......... .......... .......... .......... .......... .......... 410 CGGCTTTGTG AACATATCAG CAAGATTATC AGCAGTTCCT ACTTTCTTCA CCTTGATTCT 34508 .......... .......... .......... .......... .......... .......... 410 CTTCTCACTT CTCAGAAAAT GATACCTCAC GTTCAAAGCA GACATCTCGA AATTCTCCAA 34568 .......... .......... .......... .......... .......... .......... 410 GAACACCGAT TAACCGGGAG GCTCTGATAC CAATTTATTA TGCGGAATTC GAGATAATAC 34628 .......... .......... .......... .......... .......... .......... 410 GAGAAAATAT AAACGCGAAA AACAAGACAA CAGATTTACG TGGTTCACCA ATAAGTTGGC 34688 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ......ATAT AAACGCGAAA AACAAGACAA CAGATTTACG TGGTTCACCA ATAAATTGGC 464 TACGTCCACG GAAAGAG-GG GAGCAGTTTT ATTACGGAAA GGCAAAAACA GAATTACAGA 34747 |||||||||| | ||||| || ||||| |||| |||| ||| | |||||||||| |||||||||| TACGTCCACG GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA 524 ATAGGGTTTG TCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAACAG G 34798 |||||||||| ||||||||| |||||||||| |||||||||| ||||||| || | ATAGGGTTTG CCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAAAAG G 575 hqPGS_C08HBa0165B06.1+_SGN-E301194- (31525 31545,33543 33556,34016 34072,34635 34798) ******************************************************************************** EST sequence 176 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 30004 to 31847): Exon 1 30614 31247 ( 634 n); cDNA 1 634 ( 634 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E213088- 1.000 634 1.000 C PGS_C08HBa0165B06.1+_SGN-E213088- (30614 31247) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 30673 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 30733 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 30793 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 30853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 30913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 30973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 31033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 31093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 31153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 31213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 31247 |||||||||| |||||||||| |||||||||| |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1+_SGN-E213088- (30614 31247) ******************************************************************************** EST sequence 276 -strand 504 n (File: SGN-E288988-) 1 TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 61 GCACCTACTG TATTTTTTTT TTTTTTTTTT TGTGCTATTG TGCAAAGCTG CATCTTCTGA 121 ATCATACATT TCATTCTGTA CTCATACAAA CTGTGACAAA GACTCATGCT TTCAGTAACA 181 CAATTTACAA ACAAAAAAAG ACAACAATGG CAGAAACACA GTTTAGAAAA TGTGCCTGCA 241 AATGTGTTCC CAAGTAGCTA CTAGCAATAA CCAAAACGAC AACAGAATGT TTGAAAAATC 301 GAAAGACCAT TATCAGCAAG TGGTGATGGG ATTATCTTCA GAGGATTCAG CAGCAGAAGC 361 AACTATCAAC TGAGGCTCAG GGATGACACC TTCTCTTCGT GCCTTTCTAC GTTCACGTTG 421 TAATCTGAAG GACTCTCTCT TTCGGTTTCT ATAGCTGTTG GGGTTTTCAG GTTGCACCTC 481 GCGTGGATAA ACACTTATCT TTTT Predicted gene structure (within gDNA segment 30948 to 37749): Exon 1 31558 31629 ( 72 n); cDNA 1 72 ( 72 n); score: 1.000 Intron 1 31630 36472 (4843 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 0.68) Exon 2 36473 36540 ( 68 n); cDNA 73 135 ( 63 n); score: 0.706 MATCH C08HBa0165B06.1+ SGN-E288988- 0.857 140 0.278 C PGS_C08HBa0165B06.1+_SGN-E288988- (31558 31629,36473 36540) Alignment (genomic DNA sequence = upper lines): TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 31617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 60 GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA AGGACCATTA 31677 |||||||||| || GCACCTACTG TA........ .......... .......... .......... .......... 72 TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC CCCGAGAGCA 31737 .......... .......... .......... .......... .......... .......... 72 ATACTTTCAT CATAAAGAGG TCTCAGAGAT CCACCAATGG ATATAGAAAG AATATCTACT 31797 .......... .......... .......... .......... .......... .......... 72 CCATCATCTA TAGCTGAATC CATGGCAGCT AAAATATCAC TGTCAGAACA ACCAACAGAG 31857 .......... .......... .......... .......... .......... .......... 72 TTACACACCT TATATATGGC TATATGGGCA AGAGGAGCAA CACCAACTGC AGTTCCATTA 31917 .......... .......... .......... .......... .......... .......... 72 GCATTTTCAT ATACATTAGC ACCTTTCACA AAAGCCCCCG CAGCTGTGCT TGCTGTGTGT 31977 .......... .......... .......... .......... .......... .......... 72 GTACCATGTC CATCATCGTC TATCGGGGAA CCATTGCCAA GTTTGTAAGA CCTGGCTCCA 32037 .......... .......... .......... .......... .......... .......... 72 ATGAGCTTGT TGTTACACTT GTTGGTGAAA TTGGGCTCAC AAACTCCTTT CCACTTAGCA 32097 .......... .......... .......... .......... .......... .......... 72 GGCGGGGGAG GCATCCCAAC ATCGCTAAAT GAAGGATGAT CAGGAAGAAT TCCAGTGTCT 32157 .......... .......... .......... .......... .......... .......... 72 AGAACTCCGA TGATCACGCC TTCTCCAAAA TTGGAATCTT TCCACAAGCC CATGTTCTGC 32217 .......... .......... .......... .......... .......... .......... 72 TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG ACAAAATCCT CTGTTTCTGA 32277 .......... .......... .......... .......... .......... .......... 72 GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT GTTCTGCAGT TAATCTTGCT 32337 .......... .......... .......... .......... .......... .......... 72 GCAAACCCTG TCATCACATT GTGATAAGAA TAGATCATTG TAGCAGCCTC TTCATTTCCA 32397 .......... .......... .......... .......... .......... .......... 72 CTAGAGCTAA TTGCGGTAGT AGTTTTAGGC AAAAAAGAAA GGTAATAGCT ATCTAAATCC 32457 .......... .......... .......... .......... .......... .......... 72 ATTAACGATG ATTGAGCAGT AATTAGGCTT TCAGGGGATT CAACATGGAC GATATAAGTC 32517 .......... .......... .......... .......... .......... .......... 72 TCGAGATTAC TCTGAATAGT AGGCCATGGG AATGAACAAA AGATGAAAAC AAAAAGGATT 32577 .......... .......... .......... .......... .......... .......... 72 TTCAAGAATC CCATGGCTGC AAATATAAGA AGTGCTGATG TATTTGGACA GTGTATTTGA 32637 .......... .......... .......... .......... .......... .......... 72 TGAATTTTTC TGCTTTTGAA GCAACTCTCT ATTTATAGTG TTTTATTATT GACCTATTCA 32697 .......... .......... .......... .......... .......... .......... 72 ACTTCTAGAA AAATTATTGT GGAAAAAAGA CCATGTGTAT GAACAAAATT ATCACTTCTA 32757 .......... .......... .......... .......... .......... .......... 72 GTGTCAGAAA ATTATATTCT ATAGTTTTAT TTTCCAAATG ACATCCACTA TAATATATTT 32817 .......... .......... .......... .......... .......... .......... 72 AATGTTAAAC AATCACTTTG TTATAAAAAA AGTTGCAAGT GTTCGAAAAC ATGCAGCTAT 32877 .......... .......... .......... .......... .......... .......... 72 TTCGGATCCT TCTTGGAAGA GTAAACATCC ATTCAAGGAT TTAAAACTAA AATTTGCAGA 32937 .......... .......... .......... .......... .......... .......... 72 TATATAATAT ATGTACCTAG TCTATGAATA ATAAGTGTAA AATAGTGAAA AGTATTAGTA 32997 .......... .......... .......... .......... .......... .......... 72 TTATTCTTCT TTAATTTCTT TTATCCCTAA AAGGAAAATC GCTCAAATTT GTTAATGAAC 33057 .......... .......... .......... .......... .......... .......... 72 TTTAGGAAAA AAGCTCATTT TATAACATCT GTTAAAAGTT TGAATTATCT ATGTCATTTT 33117 .......... .......... .......... .......... .......... .......... 72 CGATTGAGAA AAGGCACATC GATGCACTTG AATGTGATAA AAGAACATTA GAAACATGCC 33177 .......... .......... .......... .......... .......... .......... 72 ACATTCAATA GAGGTATACC AAGGTGAAAG TAGGTACTTT CTAATGCGAG AACCATCCGA 33237 .......... .......... .......... .......... .......... .......... 72 GAAATAAAAC TGAAATTATC TAATTACATA AATATTTCTA TAATATTTAC TAGTTTTCTT 33297 .......... .......... .......... .......... .......... .......... 72 TATAGTTTGA AATAATTATG TATATATAGT TTCACTAATT TACAGTTTCA TTACAGATAT 33357 .......... .......... .......... .......... .......... .......... 72 TAAGTCAGAT ACACTAATCT ATATATATAT ATATATATAT ATATATATAT ATGTATTTTT 33417 .......... .......... .......... .......... .......... .......... 72 GCTACCAAAT AAAAAAAATA GTGAGAAATA CGAGCGAAAA AAAGAAAGAG GCGACCGAAA 33477 .......... .......... .......... .......... .......... .......... 72 TACCCAAATA TATGTGACTC ATCCCCATAA ACATCATGAA AATCGTATTA ACTACATGTC 33537 .......... .......... .......... .......... .......... .......... 72 TACAGGAGAT AAGAAAGAGG CGAGTGAGAT AATCACATAC ATGTCAATCG ATAGAAAATT 33597 .......... .......... .......... .......... .......... .......... 72 ACACTTAATT TAAATTTTAA CTTCATATAT TATTTGAACT TCTAAACTAT TATTATCATA 33657 .......... .......... .......... .......... .......... .......... 72 ATAATTTCTC GTATAATTGG CGTATACTAA TCATCAAACT CATTTACCTA ACAAAAGTTG 33717 .......... .......... .......... .......... .......... .......... 72 ACCCAAGACT TAATATCCCA ACACAACTTA AACTTTTATT TATTTTGTGT TGTGTTTTTA 33777 .......... .......... .......... .......... .......... .......... 72 TATGTGGAAA TCCATATTTA TCTATTTATT CCTTTGAATT ACTGCAGAAA TTCCTAGAGA 33837 .......... .......... .......... .......... .......... .......... 72 AAATTGGCAC TACATTTCAG TCCACTTGAT TACTTGTGGG GGCACCAAAG GACCAACAGG 33897 .......... .......... .......... .......... .......... .......... 72 GGCTGCTAGA AAAAAATATT GTCTTTACAT GTGGAAATCC AAGGAATAAA ACTGATAGTG 33957 .......... .......... .......... .......... .......... .......... 72 GATAGATATA TAATATACTC ACATTCGTCC CATTTTATAT GACATTATTT GACCTGACAC 34017 .......... .......... .......... .......... .......... .......... 72 ATAGTTCAAA AAATAAATGA AATGTTGTGC GAAATTCGAG ATAATACGAG AAAATATAAA 34077 .......... .......... .......... .......... .......... .......... 72 CGCGAAAAAC AAGACAATAG ATTTACGTGG TTCACCAATA AGTTGGCTAC GTCCACGGAA 34137 .......... .......... .......... .......... .......... .......... 72 AGAGGGGAGC AGTTTTATTA TGGAAAGGCA AAAATAGAAT TACAGAATAG GGTTTGTCAT 34197 .......... .......... .......... .......... .......... .......... 72 AGCGTCTATA TATAGTGCTA AGCTATGCCC TAACAGGCTT GGGCCCAAAA TACATAATTG 34257 .......... .......... .......... .......... .......... .......... 72 ACAGATAACT AAGGGCTCAA TTCAAGGCAT TCAACAAATC TCCACCTTGA CTTGAATTCT 34317 .......... .......... .......... .......... .......... .......... 72 CCAAACAGAT TCTTCAGACG CACTATGATA GTGCCAGGCC TCCCCCTCTT CCTCAGAATT 34377 .......... .......... .......... .......... .......... .......... 72 GCCCCGCAGG GCAATTAACA GCTTCTGATG TTGAGCAAGT CCAAACAGTG TTGAAACTTG 34437 .......... .......... .......... .......... .......... .......... 72 CTCTGTGGAA CCGGCTTTGT GAACATATCA GCAAGATTAT CAGCAGTTCC TACTTTCTTC 34497 .......... .......... .......... .......... .......... .......... 72 ACCTTGATTC TCTTCTCACT TCTCAGAAAA TGATACCTCA CGTTCAAAGC AGACATCTCG 34557 .......... .......... .......... .......... .......... .......... 72 AAATTCTCCA AGAACACCGA TTAACCGGGA GGCTCTGATA CCAATTTATT ATGCGGAATT 34617 .......... .......... .......... .......... .......... .......... 72 CGAGATAATA CGAGAAAATA TAAACGCGAA AAACAAGACA ACAGATTTAC GTGGTTCACC 34677 .......... .......... .......... .......... .......... .......... 72 AATAAGTTGG CTACGTCCAC GGAAAGAGGG GAGCAGTTTT ATTACGGAAA GGCAAAAACA 34737 .......... .......... .......... .......... .......... .......... 72 GAATTACAGA ATAGGGTTTG TCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAACAG 34797 .......... .......... .......... .......... .......... .......... 72 GCTTGGGCCC AAAATACATA ATTGACAGAT AACTAAGGCT CAATTCAAGG CATTCAACAT 34857 .......... .......... .......... .......... .......... .......... 72 GAAGACTTTT TGAATTGTTT ACCATATTGT CCTTCAAAAG TGAATTGACG TTTCTGTCTC 34917 .......... .......... .......... .......... .......... .......... 72 TTCATAAATG TATTAGAGTA TTATTTAAAA TTAAGCAGGA CCAATAAAGA TAAAAGAGAA 34977 .......... .......... .......... .......... .......... .......... 72 ATTGTACCTT TAAATACTTG TCGTATCATA TAAGGAAATG TGACATTCTT TTTGACACTG 35037 .......... .......... .......... .......... .......... .......... 72 ACTAAAAAGG AAACAATGTC ACATAAATTA GGACGAAGTG AGTATGTATT TAATTCATGA 35097 .......... .......... .......... .......... .......... .......... 72 ATAATAAGTG TATAATTAAT ATATAATCTA TGTATATCAA AAAAGGAAAG TACACAACGA 35157 .......... .......... .......... .......... .......... .......... 72 ATTCAATCAA TTCTTTGTGT TAAAAATAAT TATTTGTTTT TCCTTTCTTT GGGGCACGTA 35217 .......... .......... .......... .......... .......... .......... 72 GGGGTGTACA TGATTGTGTT GGTTCGGGTT TTTCAAATAC CAAACTAAAT CATTTGTATA 35277 .......... .......... .......... .......... .......... .......... 72 AAAATTTTAA ATTTATAAAC CAAACCAAAC TTATAAAATT TGAATATTTT GAGTTTTTCA 35337 .......... .......... .......... .......... .......... .......... 72 ACCTCGGATT GGTTCGGCTT TTACAAATAT CAAACGAAAT CATTGTGGCG AATTTTTAAA 35397 .......... .......... .......... .......... .......... .......... 72 TTTATAAATC AGACCAAATA ATAAACCTTG AACTTTTTTC AGTTTTTTGA ATTTTTCGGT 35457 .......... .......... .......... .......... .......... .......... 72 AAAGTTTACA TACAAACATA TAATTAACTT GTGCTTCAGA TTTTTCTTTA GTCCAACCAA 35517 .......... .......... .......... .......... .......... .......... 72 AGTACTATTA TCTAAGGTGT TTCTTAAAAA AAATATACAA AACATGAGAG GAGTATTGAT 35577 .......... .......... .......... .......... .......... .......... 72 GACTCAAAAA TATTACATTA AATAATAATG AAATCATCAT ACAAAATAAA TATTGTAAAG 35637 .......... .......... .......... .......... .......... .......... 72 TCATAATGAA AATGATCGTA ATTTGAAAGT ATTAAATCAT GTTAAAATAA GTTTAATAAG 35697 .......... .......... .......... .......... .......... .......... 72 TATTAGTTAC ATTACTAACT ATTTAAGAAA AATTAGAATT AACTATGTAT GTTAATTATC 35757 .......... .......... .......... .......... .......... .......... 72 TAAACTAATG TAAAACTAAA GAACAAATTT TCAATATTAT TGTCATTCTT AGTGTTGAAT 35817 .......... .......... .......... .......... .......... .......... 72 TGATTTTCTT TTTGCATTAT TATAAATTTA ATTATGATTT AAGTATTATT ATAATTATCA 35877 .......... .......... .......... .......... .......... .......... 72 ACATCTATGA ACTATAATAG TTGTTGGACA TTTCAAATTC TAAGTATATT AAATTTATAA 35937 .......... .......... .......... .......... .......... .......... 72 AATTATGAAA AAATACAAAA AATATTTTAA AATCATATCA AAGTAAATAT TTTTATACAT 35997 .......... .......... .......... .......... .......... .......... 72 AAAATAAATT TAAAATAACA TATATAATGT CGAGTTGATT TTTTCTAGTT AAAACCAAAT 36057 .......... .......... .......... .......... .......... .......... 72 ACAGTCAATT TTTTTTTTCA ATTCCAAACC ACTAATCGGG TTTTTTTGGG GGGTTAACTC 36117 .......... .......... .......... .......... .......... .......... 72 GATTTGCGAT TTGGTTCGGT TTTCTGTTCG TTTTTGTATA CCGTAGAGGC ACGATATGCA 36177 .......... .......... .......... .......... .......... .......... 72 TAAAATTATG CACGTTCATA AAGTGTTGAG TCATATTTAG AGAAGATTTG AATTGGTTGA 36237 .......... .......... .......... .......... .......... .......... 72 GATTCAAGAA AACACATTGT TGAGGAAGAT GAACTACAAT GCATAAACAT TGTACAAACA 36297 .......... .......... .......... .......... .......... .......... 72 GAGTATATGG ATGTATATAC ATCTCTGATA CATAGTTATA CATCATATAT ACATAATTAT 36357 .......... .......... .......... .......... .......... .......... 72 ACAAGATTGA TACATTGCAT GAAGCCCTCC CTTACGATCT TGGGCAGTGA CTCTTAATGA 36417 .......... .......... .......... .......... .......... .......... 72 GCTATTTTGA GGTCGATTTA GGACTAAGTT AAGTTTTTAT TATTATTATT ATTATTATTA 36477 | || .......... .......... .......... .......... .......... .....TTTTT 77 TTATTATTAT TATTATGATA TTGAGTCAAA TCCATTCATA CTTTTTATTC ATTCAATTTC 36537 || || || | | || || || ||| | |||| | | ||| ||| | | || || | ||||| TTTTTTTTTT TTTTGTGCTA TTGTG-CAAA -GC-TGCAT- CTTCTGAATC ATAC-ATTTC 132 ATT 36540 ||| ATT 135 hqPGS_C08HBa0165B06.1+_SGN-E288988- (31558 31629,36473 36540) ******************************************************************************** EST sequence 215 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 29984 to 31901): Exon 1 30594 31301 ( 708 n); cDNA 1 708 ( 708 n); score: 0.996 MATCH C08HBa0165B06.1+ SGN-E213673- 0.996 708 1.000 C PGS_C08HBa0165B06.1+_SGN-E213673- (30594 31301) Alignment (genomic DNA sequence = upper lines): AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT 30653 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 30713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 30773 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 30833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 30893 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 30953 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 31013 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 31073 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 31133 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 31193 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 31253 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 31301 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 708 hqPGS_C08HBa0165B06.1+_SGN-E213673- (30594 31301) ******************************************************************************** EST sequence 194 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 30108 to 32021): Exon 1 30718 31421 ( 704 n); cDNA 1 704 ( 704 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E212584- 1.000 704 1.000 C PGS_C08HBa0165B06.1+_SGN-E212584- (30718 31421) Alignment (genomic DNA sequence = upper lines): ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 30777 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 30837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 30897 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 30957 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 31017 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 31077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 31137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 31197 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 31257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 31317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 31377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 31421 |||||||||| |||||||||| |||||||||| |||||||||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1+_SGN-E212584- (30718 31421) ******************************************************************************** EST sequence 243 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 29875 to 36500): Exon 1 30746 31337 ( 592 n); cDNA 1 592 ( 592 n); score: 0.840 MATCH C08HBa0165B06.1+ SGN-E329031- 0.840 592 1.000 C PGS_C08HBa0165B06.1+_SGN-E329031- (30746 31337) Alignment (genomic DNA sequence = upper lines): ATAAATAAGG TACATAATCC TCAAATGGGG TATCATAAAC TAGTCCTGGA TCATTTGCCC 30805 |||||||||| | || || || ||||| | |||||||||| |||||||||| ||| | | | ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 60 TCGATGGATT AACATGTCCT GCACCTATTG CATAGATATC AGCAGGACGG AGCCTTTGGT 30865 |||||||||| |||||||||| ||||| |||| || ||| ||| ||||| | | ||||||| || TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 120 CGAGTATTGG ACTACTGGCA AGGTTTAATG TGTCAGCGGT TGTCATCATT GCAGACTTAA 30925 | |||||||| ||| |||| ||||||| || ||||||| || |||||||||| || ||||||| CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 180 TAACAGCAGG AGACCAATCA GGATGTGTTC TCTTCAGCAG AGCTGCTACC CCACTAAGGT 30985 || | ||||| |||||||||| ||||||| | |||||||||| |||||| || |||||||||| TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 240 GTGGGCAAGA CATCGAGGTG CCTGATATAA TATTGAATGT GGATTTGGTG TCCTTGTTGT 31045 | |||||||| ||| ||||| || |||| | |||||||||| ||||| ||| | ||||||| GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 300 CATCCACAGA AGTAGGCCAA GCAGCGAGGA TATTAACACC AGGACCAATT ATGTCAGGTT 31105 |||||| || ||||||||| ||||| |||| |||||||| |||||| ||| |||||||||| TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 360 TCAAGATCCC AGGATTAGGT TTACTTGGTC CGCGAGAAGA AAATGCAGCA ACTATTGGAG 31165 | ||||| || |||| | | | ||||||| | || || || ||||| |||| ||||| |||| TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 420 CATTTTTATC TCCAATTACT GTTCCTTGGA TTGTGATTGT AGCAACAGGG TTCGATATTG 31225 ||||||| || ||||||||| ||||| |||| ||||||| |||||| || || || || CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 480 AGTTTGTATA GGCACGAATT TTGCTTCCAT CTGCAGCTGA AACAACCAAT GCTGGAAGAA 31285 |||| |||| |||| ||||| || |||||| | ||| ||| |||| ||||| || ||||| | AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 540 CATGAGCATC AGCTGATTTA GTGACACCAT ATTGTGATGG GTTGATGACA AT 31337 ||||||| || |||||||||| || ||||| | || | | ||||||| | || CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 592 hqPGS_C08HBa0165B06.1+_SGN-E329031- (30746 31337) ******************************************************************************** EST sequence 286 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 29349 to 32576): Exon 1 30832 31439 ( 608 n); cDNA 1 605 ( 605 n); score: 0.880 MATCH C08HBa0165B06.1+ SGN-E308535- 0.880 608 1.005 C PGS_C08HBa0165B06.1+_SGN-E308535- (30832 31439) Alignment (genomic DNA sequence = upper lines): ATTGCATAGA TATCAGCAGG ACGGAGCCTT TGGTCGAGTA TTGGACTACT GGCAAGGTTT 30891 |||||| ||| | || ||||| | | | | || | || |||| |||||||||| |||||||||| ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 60 AATGTGTCAG CGGTTGTCAT CATTGCAGAC TTAATAACAG CAGGAGACCA ATCAGGATGT 30951 || |||| || |||||||||| ||||||||| |||||| ||| |||||||||| |||||||||| AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 120 GTTCTCTTCA GCAGAGCTGC TACCCCACTA AGGTGTGGGC AAGACATCGA GGTGCCTGAT 31011 || ||||||| |||||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 180 ATAATATTGA ATGTGGATTT GGTGTCCTTG TTGTCATCCA CAGAAGTAGG CCAAGCAGCG 31071 |||||||||| |||||||||| ||| | ||| |||||||||| | || ||||| ||||||||| ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 240 AGGATATTAA CACCAGGACC AATTATGTCA GGTTTCAAGA TCCCAGGATT AGGTTTACTT 31131 |||||||||| |||||||||| ||||||||| |||||||||| | |||||| | ||||||| || AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 300 GGTCCGCGAG AAGAAAATGC AGCAACTATT GGAGCATTTT TATCTCCAAT TACTGTTCCT 31191 |||||||||| ||||||||| ||||||||| ||||| |||| ||||||||| || ||||||| GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 360 TGGATTGTGA TTGTAGCAAC AGGGTTCGAT ATTGAGTTTG TATAGGCACG AATTTTGCTT 31251 |||| ||||| || |||| |||||| ||| |||||||||| |||| | | | |||| || || TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 420 CCATCTGCAG CTGAAACAAC CAATGCTGGA AGAACATGAG CATCAGCTGA TTTAGTGACA 31311 |||||||||| ||||||| | ||| |||||| |||||||||| |||||||||| ||| |||||| CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 480 CCATATTGTG ATGGGTTGAT GACAATCATG CCAACACCTC CAGCATCCTT CACAGCTTGT 31371 |||| || || ||||||| | ||||||| |||||||||| |||||||||| |||||||||| CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 540 CCTTTATCAA CATTGGCTAC ACCGCCGAAT GCTAAACATA ATACTATCTT TCCTCTTATA 31431 ||||| ||| | || | | | || | | | |||||| |||||||| |||| |||| CCTTTTACAA CCTTAG--A- AACGACACCT GGATAACATA TGACTATCTT TCCTTTTATT 597 GCAGGGTC 31439 |||||||| GCAGGGTC 605 hqPGS_C08HBa0165B06.1+_SGN-E308535- (30832 31439) ******************************************************************************** EST sequence 361 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 26310 to 32162): Exon 1 30900 31562 ( 663 n); cDNA 1 663 ( 663 n); score: 0.925 MATCH C08HBa0165B06.1+ SGN-E397025- 0.925 663 1.000 C PGS_C08HBa0165B06.1+_SGN-E397025- (30900 31562) Alignment (genomic DNA sequence = upper lines): AGCGGTTGTC ATCATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTTCTCTT 30959 ||| |||||| |||||||||| | |||||||| |||||||||| |||||||||| |||| | || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCTACCCCAC TAAGGTGTGG GCAAGACATC GAGGTGCCTG ATATAATATT 31019 |||||||||| ||||| |||| ||||||| || ||||||||| |||||||||| |||| ||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTCCT TGTTGTCATC CACAGAAGTA GGCCAAGCAG CGAGGATATT 31079 |||||||||| ||||||| || |||||||||| ||| || ||| |||||||||| | |||||||| GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCAATTATGT CAGGTTTCAA GATCCCAGGA TTAGGTTTAC TTGGTCCGCG 31139 | |||||||| || ||||||| |||| ||||| ||| |||||| ||| | ||| ||||||| | AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 AGAAGAAAAT GCAGCAACTA TTGGAGCATT TTTATCTCCA ATTACTGTTC CTTGGATTGT 31199 || |||||| |||||||| | | |||||||| ||| |||||| |||| ||||| |||||| || TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGTAGCA ACAGGGTTCG ATATTGAGTT TGTATAGGCA CGAATTTTGC TTCCATCTGC 31259 ||||||||| |||||| | | || ||||||| | || ||| ||||||| |||| ||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 31319 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TGATGGGTTG ATGACAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 31379 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACATTGGCT ACACCGCCGA ATGCTAAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 31439 |||||||||| ||| ||||| |||| |||| |||||||||| |||||||||| |||||||||| AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 AGTGAGTGAC CCTCGTCTGC AATAAGGGGT TTCAGATGGA TCTTTTGCAT TTTTTGCAGC 31499 ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCAAATAGA GTGAAGAATG TTGAGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 31559 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 AAA 31562 ||| AAA 663 hqPGS_C08HBa0165B06.1+_SGN-E397025- (30900 31562) ******************************************************************************** EST sequence 167 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 29682 to 34316): Exon 1 30994 31613 ( 620 n); cDNA 1 617 ( 617 n); score: 0.860 MATCH C08HBa0165B06.1+ SGN-E306389- 0.860 620 1.005 C PGS_C08HBa0165B06.1+_SGN-E306389- (30994 31613) Alignment (genomic DNA sequence = upper lines): GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA 31053 |||||||||| ||| |||||| |||||||||| |||||||||| | | ||||| ||||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC 31113 || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| ||||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA 31173 |||||| ||| ||||| |||| |||||||||| ||||||| || ||||||| || ||| |||| | CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA 31233 |||||||||| ||||||||| || ||||||| |||| || |||| ||||| |||||||||| TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAGGCACGAA TTTTGCTTCC ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA 31293 || | | ||| || || |||| |||||||||| ||||| ||| | |||||||| |||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGATT TAGTGACACC ATATTGTGAT GGGTTGATGA CAATCATGCC AACACCTCCA 31353 |||||||||| | |||||||| || || || |||||||| ||||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTCA CAGCTTGTCC TTTATCAACA TTGGCTACAC CGCCGAATGC TAAACATAAT 31413 |||||||||| |||||||||| ||| |||| || | | | || | || |||||| GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAG--A-AA CGACACCTGG ATAACATATG 417 ACTATCTTTC CTCTTATAGC AGGGTCAGTG AGTGACCCTC GTCTGCAATA AGGGGTTTCA 31473 |||||||||| || |||| || |||||||||| ||||||||| || |||| || |||||||| | ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 GATGGATCTT TTGCATTTTT TGCAGCATCA AATAGAGTGA AGAATGTTGA GTTGGAAATC 31533 |||||||| | | ||| || ||||||| | ||||||| ||||| |||| || ||||||| GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TTTGGACGAT AAGCAGATTC TCCTTCAAAT TCCTCTCCAT TTCCGAGCTT AGCAGTAGCT 31593 | |||||||| ||| || ||| ||||||||| |||||| || |||| || | | ||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTATCTTTC TATCAAGCGT 31613 |||||||||| ||||| || TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1+_SGN-E306389- (30994 31613) ******************************************************************************** EST sequence 222 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 26392 to 32431): Exon 1 31061 31831 ( 771 n); cDNA 1 771 ( 771 n); score: 0.805 MATCH C08HBa0165B06.1+ SGN-E540271- 0.805 771 1.000 C PGS_C08HBa0165B06.1+_SGN-E540271- (31061 31831) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC GAGGATATTA ACACCAGGAC CAATTATGTC AGGTTTCAAG ATCCCAGGAT 31120 |||||||||| |||| ||| |||||||||| | |||||||| |||||| ||| || |||||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGGTTTACT TGGTCCGCGA GAAGAAAATG CAGCAACTAT TGGAGCATTT TTATCTCCAA 31180 | | | || |||||| || || ||||||| ||||||||| ||||||||| || ||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTACTGTTCC TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC 31240 |||| ||||| |||| ||| |||| ||||| | || || || |||||| |||||||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GAATTTTGCT TCCATCTGCA GCTGAAACAA CCAATGCTGG AAGAACATGA GCATCAGCTG 31300 ||||||| | |||||| ||| ||||||| ||||||| || ||| |||||| || ||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTGAC ACCATATTGT GATGGGTTGA TGACAATCAT GCCAACACCT CCAGCATCCT 31360 ||||||| || ||| | || | | |||| ||| |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TCACAGCTTG TCCTTTATCA ACATTGGCTA CACCGCCGAA TGCTAAACAT AATACTATCT 31420 | || | ||| ||||| | || || || | || | ||||| || ||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TTCCTCTTAT AGCAGGGTCA GTGAGTGACC CTCGTCTGCA ATAAGGGGTT TCAGATGGAT 31480 | ||| | || |||||||||| | ||||| | || | || || | |||| | | || ||| TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CTTTTGCATT TTTTGCAGCA TCAAATAGAG TGAAGAATGT TGAGTTGGAA ATCTTTGGAC 31540 | || |||| ||| ||||| ||| |||||| ||||||||| |||||||||| |||||||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTCA AATTCCTCTC CATTTCCGAG CTTAGCAGTA GCTTTTATCT 31600 |||||||||| |||||||||| |||||||| | |||||| || |||| ||||| | || | | GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTATCAAG CGTGCTGGCA CCTACTGTAA GAATCCAAGG GGCTGAGTTA TCTACTGAGG 31660 |||||||| | || |||||| || || || | ||||||| || |||| ||| |||| | | TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 CAGGCGAAGG ACCATTATTG CCTGCTGAGC AACTAACAAG AATGCCTCTT TGTGTTGCAC 31720 || |||| || ||| ||||| ||||||||| ||| |||| ||| |||||| | |||||||| CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TGTACGCCCC GAGAGCAATA CTTTCATCAT AAAGAGGTCT CAGAGATCCA CCAATGGATA 31780 |||||| ||| |||||||||| | ||||||| | |||| | | |||| |||| ||| | TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 720 TAGAAAGAAT ATCTACTCCA TCATCTATAG CTGAATCCAT GGCAGCTAAA A 31831 | |||||||| |||||| ||| |||||||||| ||| |||||| |||||||||| | TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 771 hqPGS_C08HBa0165B06.1+_SGN-E540271- (31061 31831) ******************************************************************************** EST sequence 268 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 30453 to 32024): Exon 1 31063 31424 ( 362 n); cDNA 1 362 ( 362 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E200689- 1.000 362 1.000 C PGS_C08HBa0165B06.1+_SGN-E200689- (31063 31424) Alignment (genomic DNA sequence = upper lines): CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 31122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 31182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 31242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 31302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 31362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 300 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 31422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 360 CC 31424 || CC 362 hqPGS_C08HBa0165B06.1+_SGN-E200689- (31063 31424) ******************************************************************************** EST sequence 152 -strand 490 n (File: SGN-E282432-) 1 GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 61 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 121 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 181 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 241 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 301 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 361 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 421 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 481 ATCCTTCAAA Predicted gene structure (within gDNA segment 28825 to 32288): Exon 1 31073 31562 ( 490 n); cDNA 1 490 ( 490 n); score: 0.914 MATCH C08HBa0165B06.1+ SGN-E282432- 0.914 490 1.000 C PGS_C08HBa0165B06.1+_SGN-E282432- (31073 31562) Alignment (genomic DNA sequence = upper lines): GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG 31132 |||||||| | |||||| || |||||||||| | |||||||| |||||| || | | |||||| GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 60 GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT 31192 |||| | || ||||||||| ||||| || | |||||||||| ||||||||| | |||||||| GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 120 GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC 31252 ||| || || |||||||||| ||| | ||| ||||||| | || ||| || ||||| ||| GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 180 CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 31312 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 240 CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 31372 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 300 CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT CCTCTTATAG 31432 |||||||||| |||||||||| ||||| || || ||||||| |||||||||| |||||||||| CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 360 CAGGGTCAGT GAGTGACCCT CGTCTGCAAT AAGGGGTTTC AGATGGATCT TTTGCATTTT 31492 |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| |||||||||| CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 420 TTGCAGCATC AAATAGAGTG AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT 31552 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||| | TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 480 CTCCTTCAAA 31562 ||||||||| ATCCTTCAAA 490 hqPGS_C08HBa0165B06.1+_SGN-E282432- (31073 31562) ******************************************************************************** EST sequence 373 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 30481 to 32184): Exon 1 31091 31584 ( 494 n); cDNA 1 494 ( 494 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E210009- 1.000 494 1.000 C PGS_C08HBa0165B06.1+_SGN-E210009- (31091 31584) Alignment (genomic DNA sequence = upper lines): CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 31150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 60 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 31210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 120 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 31270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 180 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 31330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 240 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 31390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 300 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 31450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 360 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 31510 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 420 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 31570 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 480 CATTTCCGAG CTTA 31584 |||||||||| |||| CATTTCCGAG CTTA 494 hqPGS_C08HBa0165B06.1+_SGN-E210009- (31091 31584) ******************************************************************************** EST sequence 235 -strand 504 n (File: SGN-E301429-) 1 CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 61 GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 121 GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 181 TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 241 ACAACCTTAG AAACGACACC TGGATAACAT ATGACTATCT TTCCTTTTAT TGCAGGGTCA 301 GTGAGTGACC CTGGTTTGCA GTAAGGGGTT TTAGATGGAT CACCTTTACC TTTTGAAGCA 361 TCATACAGAG TGAAGAATTT TGAGTCGGAA ATCTGTGGAC GATAAGAAGC TTCCCCTTCA 421 AATTCCTCTG TATTTCCAAG TGTAACAGTA ACTTTTATCT TTCTATCAGT AGTGCTGGCG 481 CCTACCGTAA GAATCCAAGG GGCG Predicted gene structure (within gDNA segment 29799 to 32253): Exon 1 31138 31643 ( 506 n); cDNA 1 503 ( 503 n); score: 0.846 MATCH C08HBa0165B06.1+ SGN-E301429- 0.846 506 1.004 C PGS_C08HBa0165B06.1+_SGN-E301429- (31138 31643) Alignment (genomic DNA sequence = upper lines): CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 31197 |||||||||| ||| |||||| ||| ||||| |||| ||||| |||||| ||| |||||||| | CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 60 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 31257 |||||| ||| | |||||| ||||||||| |||||||| | | ||||| | | |||||||| GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 120 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 31317 |||||||||| | |||| || |||||||||| |||||||||| ||||||| || |||||||| | GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 180 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 31377 | || ||| ||||| |||| ||| |||||| |||||||||| |||||||||| ||||||||| TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 240 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT TATAGCAGGG 31437 |||| || | | | || | || || |||| |||| |||||||| | ||| |||||| ACAACCTTAG --A-AACGAC ACCTGGATAA CATATGACTA TCTTTCCTTT TATTGCAGGG 297 TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC ATTTTTTGCA 31497 |||||||||| ||||| || | ||| |||||| |||| ||||| |||| | | ||||| | TCAGTGAGTG ACCCTGGTTT GCAGTAAGGG GTTTTAGATG GATCACCTTT ACCTTTTGAA 357 GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC AGATTCTCCT 31557 |||||| | | |||||||||| | |||||| | ||||||| || ||||||||| || ||| ||| GCATCATACA GAGTGAAGAA TTTTGAGTCG GAAATCTGTG GACGATAAGA AGCTTCCCCT 417 TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 31617 |||||||||| || |||||| || || || ||| |||||| |||||||||| | |||||| TCAAATTCCT CTGTATTTCC AAGTGTAACA GTAACTTTTA TCTTTCTATC AGTAGTGCTG 477 GCACCTACTG TAAGAATCCA AGGGGC 31643 || ||||| | |||||||||| |||||| GCGCCTACCG TAAGAATCCA AGGGGC 503 hqPGS_C08HBa0165B06.1+_SGN-E301429- (31138 31643) ******************************************************************************** EST sequence 202 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 29865 to 32431): Exon 1 31177 31831 ( 655 n); cDNA 1 655 ( 655 n); score: 0.896 MATCH C08HBa0165B06.1+ SGN-E335107- 0.896 655 1.000 C PGS_C08HBa0165B06.1+_SGN-E335107- (31177 31831) Alignment (genomic DNA sequence = upper lines): CCAATTACTG TTCCTTGGAT TGTGATTGTA GCAACAGGGT TCGATATTGA GTTTGTATAG 31236 ||||||| || ||||||||| || |||||| ||||||||| | ||| |||| ||| | || CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCACGAATTT TGCTTCCATC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 31296 ||| |||||| | |||| || |||||||||| |||||||||| |||||||||| |||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGACAA TCATGCCAAC ACCTCCAGCA 31356 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 180 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACACCGC CGAATGCTAA ACATAATACT 31416 |||||||||| |||||||||| |||||||||| |||||| || ||| |||| | |||||||||| TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 240 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GACCCTCGTC TGCAATAAGG GGTTTCAGAT 31476 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||| ||| ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 300 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGAGTT GGAAATCTTT 31536 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 360 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CGAGCTTAGC AGTAGCTTTT 31596 |||||||||| |||||||||| |||||||||| |||||||||| | ||| || | |||||||||| GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 420 ATCTTTCTAT CAAGCGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGA GTTATCTACT 31656 |||||||| | |||||||||| ||||||||| |||||||||| ||||||| | ||| || || ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 480 GAGGCAGGCG AAGGACCATT ATTGCCTGCT GAGCAACTAA CAAGAATGCC TCTTTGTGTT 31716 | | | | | |||||| | ||| || || || ||||| | ||||||| || ||||| ||| GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 540 GCACTGTACG CCCCGAGAGC AATACTTTCA TCATAAAGAG GTCTCAGAGA TCCACCAATG 31776 |||||||||| |||||| ||| |||| | || || | || | | || ||||| || | GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 600 GATATAGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 31831 || || |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 655 hqPGS_C08HBa0165B06.1+_SGN-E335107- (31177 31831) ******************************************************************************** EST sequence 389 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 30581 to 32343): Exon 1 31191 31743 ( 553 n); cDNA 1 556 ( 556 n); score: 0.986 MATCH C08HBa0165B06.1+ SGN-E208913- 0.986 553 0.995 C PGS_C08HBa0165B06.1+_SGN-E208913- (31191 31743) Alignment (genomic DNA sequence = upper lines): TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 31250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCATCTGCA GCTGAAACAA CC--A-ATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 31307 |||||||||| |||||||||| || | |||| |||||||||| |||||||||| |||||||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 31367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 180 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 31427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 240 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 31487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 300 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 31547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 360 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 31607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 420 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 31667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 480 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 31727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 540 CCCGAGAGCA ATACTT 31743 |||||||||| |||||| CCCGAGAGCA ATACTT 556 hqPGS_C08HBa0165B06.1+_SGN-E208913- (31191 31743) ******************************************************************************** EST sequence 299 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 30601 to 32442): Exon 1 31265 31842 ( 578 n); cDNA 1 578 ( 578 n); score: 0.896 MATCH C08HBa0165B06.1+ SGN-E244401- 0.896 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E244401- (31265 31842) Alignment (genomic DNA sequence = upper lines): AAACAACCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTGACACCA TATTGTGATG 31324 ||| | |||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 60 GGTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT TTATCAACAT 31384 |||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||| ||||| TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 120 TGGCTACACC GCCGAATGCT AAACATAATA CTATCTTTCC TCTTATAGCA GGGTCAGTGA 31444 ||| || || ||| |||| | |||||||| |||||||||| ||||||| || ||| | ||| TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 180 GTGACCCTCG TCTGCAATAA GGGGTTTCAG ATGGATCTTT TGCATTTTTT GCAGCATCAA 31504 |||||||| | | |||||||| |||||||| | |||||||||| ||||| |||| |||||||||| GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 240 ATAGAGTGAA GAATGTTGAG TTGGAAATCT TTGGACGATA AGCAGATTCT CCTTCAAATT 31564 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 300 CCTCTCCATT TCCGAGCTTA GCAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 31624 |||||||||| ||| |||||| ||||||||| |||||||||| |||||||||| |||||||||| CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 360 CTGTAAGAAT CCAAGGGGCT GAGTTATCTA CTGAGGCAGG CGAAGGACCA TTATTGCCTG 31684 |||||||||| |||||||||| | || | | |||||||| | | |||| || |||| |||| CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 420 CTGAGCAACT AACAAGAATG CCTCTTTGTG TTGCACTGTA CGCCCCGAGA GCAATACTTT 31744 | || ||||| |||| || |||||| | |||||||||| ||||| ||| |||||| | CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 480 CATCATAAAG AGGTCTCAGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 31804 ||||||| | || | || |||||||||| |||||||||| |||||||||| |||||||||| CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 540 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 31842 |||||||||| |||||||||| |||||||||| |||||||| CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 578 hqPGS_C08HBa0165B06.1+_SGN-E244401- (31265 31842) ******************************************************************************** EST sequence 308 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 30277 to 32442): Exon 1 31283 31842 ( 560 n); cDNA 1 560 ( 560 n); score: 0.895 MATCH C08HBa0165B06.1+ SGN-E244422- 0.895 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E244422- (31283 31842) Alignment (genomic DNA sequence = upper lines): GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC 31342 |||||||||| |||||||| | |||||||| | |||||||||| || |||||| |||||||||| GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 60 CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG 31402 |||||||||| |||||||||| ||| ||| || ||||| |||| | ||| || || ||| || CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 120 CTAAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT CGTCTGCAAT 31462 ||| |||||| |||||||||| ||||||||| ||||| | | |||||||||| || |||||| CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 180 AAGGGGTTTC AGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 31522 |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 240 AGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA TTTCCGAGCT 31582 |||||||||| || ||||||| |||||||||| ||||||| || |||||||||| ||||| |||| AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 300 TAGCAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 31642 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 360 CTGAGTTATC TACTGAGGCA GGCGAAGGAC CATTATTGCC TGCTGAGCAA CTAACAAGAA 31702 ||| || | ||||||||| || |||| | | |||| || ||| || ||| || |||| || CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 420 TGCCTCTTTG TGTTGCACTG TACGCCCCGA GAGCAATACT TTCATCATAA AGAGGTCTCA 31762 |||||| ||||||||| || ||||| | |||||||| |||||||| | || | CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 480 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 31822 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 540 CAGCTAAAAT ATCACTGTCA 31842 |||||||||| |||||||||| CAGCTAAAAT ATCACTGTCA 560 hqPGS_C08HBa0165B06.1+_SGN-E244422- (31283 31842) ******************************************************************************** EST sequence 396 -strand 435 n (File: SGN-E208810-) 1 CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 61 GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 121 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 181 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 241 GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 301 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 361 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 421 CCGAGAGCAA TACTT Predicted gene structure (within gDNA segment 30702 to 32343): Exon 1 31312 31743 ( 432 n); cDNA 1 435 ( 435 n); score: 0.969 MATCH C08HBa0165B06.1+ SGN-E208810- 0.969 432 0.993 C PGS_C08HBa0165B06.1+_SGN-E208810- (31312 31743) Alignment (genomic DNA sequence = upper lines): CCATATTGTG ATGGGTTGAT GACAATCATG -CCAACACCT CCAGCATCCT TCACA-GCTT 31369 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| | ||| | || CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 60 GTCCTTTATC AACATTGGCT ACACCGCCGA AT-GCTAAAC ATAATACTAT CTTTCCTCTT 31428 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ||||||| || GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 120 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 31488 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 180 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 31548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 240 GATTCTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 31608 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 300 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTACTGA GGCAGGCGAA 31668 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 360 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 31728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 420 CCGAGAGCAA TACTT 31743 |||||||||| ||||| CCGAGAGCAA TACTT 435 hqPGS_C08HBa0165B06.1+_SGN-E208810- (31312 31743) ******************************************************************************** EST sequence 257 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 30876 to 32550): Exon 1 31486 31950 ( 465 n); cDNA 1 465 ( 465 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E202140- 1.000 465 1.000 C PGS_C08HBa0165B06.1+_SGN-E202140- (31486 31950) Alignment (genomic DNA sequence = upper lines): GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 31545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 31605 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 31665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 31725 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 31785 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 300 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 31845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 360 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 31905 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 420 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA 31950 |||||||||| |||||||||| |||||||||| |||||||||| ||||| GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA 465 hqPGS_C08HBa0165B06.1+_SGN-E202140- (31486 31950) ******************************************************************************** EST sequence 185 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 29655 to 34397): Exon 1 31807 32582 ( 776 n); cDNA 1 779 ( 779 n); score: 0.904 MATCH C08HBa0165B06.1+ SGN-E539488- 0.904 776 0.996 C PGS_C08HBa0165B06.1+_SGN-E539488- (31807 32582) Alignment (genomic DNA sequence = upper lines): ATAGCTGAAT CCATGGCAGC TAAAATATCA CTGTCAGAAC AA---CCAAC AGAGTTACAC 31863 ||||||| || |||||||||| ||||||||| |||||||||| | ||| | ||| |||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA TGGCTATATG GGCAAGAGGA GCAACACCAA CTGCAGTTCC ATTAGCATTT 31923 |||||||||| ||||| || ||| ||||| |||||||||| | ||||| || ||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 TCATATACAT TAGCACCTTT CACAAAAGCC CCCGCAGCTG TGCTTGCTGT GTGTGTACCA 31983 || ||| || |||||||||| |||||| || || ||||||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCATCAT CGTCTATCGG GGAACCATTG CCAAGTTTGT AAGACCTGGC TCCAATGAGC 32043 ||||||| || | |||||||| |||||||||| ||||||| | |||||||||| |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGTTGGT GAAATTGGGC TCACAAACTC CTTTCCACTT AGCAGGCGGG 32103 |||||||||| |||| |||| |||||||| | |||||||||| |||||||||| |||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATCC CAACATCGCT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 32163 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CGCCTTCTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGCTGCAAA 32223 |||||||||| | ||| |||| |||||||||| |||||||||| |||||||||| ||| |||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTGTGC AAAGACAAAA TCCTCTGTTT CTGAGCAGAG 32283 |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTTCTG CAGTTAATCT TGCTGCAAAC 32343 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTGTCATCA CATTGTGATA AGAATAGATC ATTGTAGCAG CCTCTTCATT TCCACTAGAG 32403 ||| |||||| ||||||| || || |||||| || |||||| ||||||||| |||||| ||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTATCTAA ATCCATTAAC 32463 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||| |||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTGAG CAGTAATTAG GCTTTCAGGG GATTCAACAT GGACGATATA AGTCTCGAGA 32523 |||||||||| || |||| | | ||||||| |||||||||| |||| ||||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TTACTCTGAA TAGTAGGCCA TGGGAATGAA CAAAAGATGA AAACAAAAAG GATTTTCAA 32582 | |||||||| || |||||| | |||| || ||||| |||| | | || ||| |||||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1+_SGN-E539488- (31807 32582) ******************************************************************************** EST sequence 327 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 31459 to 33220): Exon 1 32069 32620 ( 552 n); cDNA 1 552 ( 552 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E207645- 1.000 552 1.000 C PGS_C08HBa0165B06.1+_SGN-E207645- (32069 32620) Alignment (genomic DNA sequence = upper lines): TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 32128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 32188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 32248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 32308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 32368 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 32428 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 32488 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 32548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 32608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 540 GTGCTGATGT AT 32620 |||||||||| || GTGCTGATGT AT 552 hqPGS_C08HBa0165B06.1+_SGN-E207645- (32069 32620) ******************************************************************************** EST sequence 404 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 27140 to 33166): Exon 1 32078 32609 ( 532 n); cDNA 1 533 ( 533 n); score: 0.933 MATCH C08HBa0165B06.1+ SGN-E330205- 0.933 532 0.998 C PGS_C08HBa0165B06.1+_SGN-E330205- (32078 32609) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAT GAAGGATGAT 32137 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||| | AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAAGAAT TCCAGTGTCT AGAACTCCGA TGATCACGCC TTCTCCAAAA TTGGAATCTT 32197 |||||| ||| |||||||||| | |||||||| |||||||||| || ||| | |||||||| | CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCACAAGCC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 32257 |||| | || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 32317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAAGAA TAGATCATTG 32377 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| | GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTCCA CTAGAGCTAA TTGCGGTAGT AGTTTTAGGC AAAAAAGAAA 32437 |||||||||| |||||||||| || || |||| ||| ||||| |||||||||| |||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT ATCTAAATCC ATTAACGATG ATTGAGCAGT AATTAGGCTT TCAGGGGATT 32497 |||||||||| | |||||||| ||||| ||| |||||| ||| || ||||||| |||||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATGGG AATGAACAAA 32557 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || || ||||| | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAAAAGGATT TTCAAGAATC CCATGGCT-G CAAATATAAG AAG 32609 |||||||||| || | |||| ||||| |||| |||||||| | | |||| || ||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG 533 hqPGS_C08HBa0165B06.1+_SGN-E330205- (32078 32609) ******************************************************************************** EST sequence 346 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 27730 to 33754): Exon 1 32137 32602 ( 466 n); cDNA 1 467 ( 467 n); score: 0.937 MATCH C08HBa0165B06.1+ SGN-E207387- 0.937 466 0.994 C PGS_C08HBa0165B06.1+_SGN-E207387- (32137 32602) Alignment (genomic DNA sequence = upper lines): TCAGGAAGAA TTCCAGTGTC TAGAACTCCG ATGATCACGC CTTCTCCAAA ATTGGAATCT 32196 ||||||| || |||||||||| || ||||||| |||||||||| ||| ||| | |||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCACAAGC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 32256 ||||| | | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 32316 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAAGA ATAGATCATT 32376 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 GTAGCAGCCT CTTCATTTCC ACTAGAGCTA ATTGCGGTAG TAGTTTTAGG CAAAAAAGAA 32436 |||||||||| |||||||||| ||| || ||| |||| ||||| ||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TATCTAAATC CATTAACGAT GATTGAGCAG TAATTAGGCT TTCAGGGGAT 32496 |||||||||| || ||||||| | ||||| || ||||||| || ||| |||||| |||||||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATGG GAATGAACAA 32556 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ||| ||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAAAAGGAT TTTCAAGAAT CCCATGGCT- GCAAATA 32602 |||||||||| ||| |||||| |||||| ||| ||||||||| || |||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATA 467 hqPGS_C08HBa0165B06.1+_SGN-E207387- (32137 32602) ******************************************************************************** EST sequence 145 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 31533 to 34387): Exon 1 32143 32581 ( 439 n); cDNA 1 439 ( 439 n); score: 0.918 MATCH C08HBa0165B06.1+ SGN-E282403- 0.918 439 1.000 C PGS_C08HBa0165B06.1+_SGN-E282403- (32143 32581) Alignment (genomic DNA sequence = upper lines): AGAATTCCAG TGTCTAGAAC TCCGATGATC ACGCCTTCTC CAAAATTGGA ATCTTTCCAC 32202 |||||||||| |||||||||| |||||||||| || ||| ||| |||||||||| |||||||||| AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 60 AAGCCCATGT TCTGCTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTGTG CAAAGACAAA 32262 |||||||||| |||| ||||| |||||||||| |||||||||| ||||||| || ||| || ||| AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 120 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTTCT 32322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 180 GCAGTTAATC TTGCTGCAAA CCCTGTCATC ACATTGTGAT AAGAATAGAT CATTGTAGCA 32382 |||||||||| |||||||||| ||| ||||| |||||||| | | || ||||| ||| ||||| GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 240 GCCTCTTCAT TTCCACTAGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 32442 |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||||| GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 300 TAGCTATCTA AATCCATTAA CGATGATTGA GCAGTAATTA GGCTTTCAGG GGATTCAACA 32502 ||||| |||| ||||| |||| ||||||||| | || |||| || ||||||| ||||||||| TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 360 TGGACGATAT AAGTCTCGAG ATTACTCTGA ATAGTAGGCC ATGGGAATGA ACAAAAGATG 32562 ||||| |||| |||||||||| || ||||||| ||| |||||| | |||| || ||||| ||| TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 420 AAAACAAAAA GGATTTTCA 32581 || | || || | ||||||| AAGATAAGAA GAATTTTCA 439 hqPGS_C08HBa0165B06.1+_SGN-E282403- (32143 32581) ******************************************************************************** EST sequence 401 -strand 641 n (File: SGN-E301078-) 1 ATATGTAAAT TGTAATGAAT AATAAAATGT AACAATTACA AAATTCAAAG ACATACGACA 61 ATAAATCATT CATAGAAAAC TAAATTAAGA AGTCTAACAG AGTGAAAAAA AAGACTAAAA 121 GAAACAGAAT ATTTAAGAAA AAAATACAAT ATAGACATTA TTCTTATAAG ATTGATGTAT 181 ATATAGATGA AAAAATAAGT AAAAATTAGT ACATAACTCT CTGAGTTTTT ATCGACTCCT 241 TTCATATCCT ATCAAAATTC AAGAGTTTTC AGCATCTATT TTTACTATAG AATAAAAATA 301 ATAATCTTGA TAGGGGTTTC ATGAGATAAA GAAGTTGAAT TTATACAAAT AGAATAGAAG 361 GAATACCAAA AGATATCTTA AAGTTTAATT TAAATATTTG GAGGTTATGA ATATGAAAAG 421 ATGATAGTTA TGAATATTAA GAGTGTTGTG CGAAATTTGA GATAATACGA GAAAATATAT 481 AAACGCGAAA ACCAAGACAC CAGTTTTACG TGGTTCACCA ATAAATTGGC TACGTCCACG 541 GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA ATAGGGTTTG 601 CCATAGCGTC TATATATAGT GCTAAGCTAC ACCCTAAAAG G Predicted gene structure (within gDNA segment 27813 to 35497): Exon 1 28640 28648 ( 9 n); cDNA 352 360 ( 9 n); score: 0.778 Intron 1 28649 29195 ( 547 n); Pd: 0.000 (s: 0), Pa: 0.334 (s: 0) Exon 2 29196 29230 ( 35 n); cDNA 361 394 ( 34 n); score: 0.629 Intron 2 29231 29505 ( 275 n); Pd: 0.709 (s: 0), Pa: 0.000 (s: 0) Exon 3 29506 29519 ( 14 n); cDNA 395 408 ( 14 n); score: 0.571 Intron 3 29520 33542 (4023 n); Pd: 0.978 (s: 0), Pa: 0.794 (s: 0) Exon 4 33543 33556 ( 14 n); cDNA 409 420 ( 12 n); score: 0.786 Intron 4 33557 34015 ( 459 n); Pd: 0.995 (s: 0), Pa: 0.000 (s: 0.74) Exon 5 34016 34072 ( 57 n); cDNA 421 476 ( 56 n); score: 0.781 Intron 5 34073 34634 ( 562 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.92) Exon 6 34635 34798 ( 164 n); cDNA 477 641 ( 165 n); score: 0.918 MATCH C08HBa0165B06.1+ SGN-E301078- 0.882 293 0.457 C PGS_C08HBa0165B06.1+_SGN-E301078- (28640 28648,29196 29230,29506 29519,33543 33556,34016 34072,34635 34798) Alignment (genomic DNA sequence = upper lines): GAATAGAGCA TGCTAGCAGC CTCTTCATTT TCACTTGAGC TGATTGTTGT AGTTTTAGGC 28699 ||||||| GAATAGAAG. .......... .......... .......... .......... .......... 360 AAAAAAGATA GATAATAGTT ATCTAAATCC GTTACCGATG ATTGTGTAGA AATTACGCTT 28759 .......... .......... .......... .......... .......... .......... 360 TCAGGAGATT CAACATGGAC TATATAAGTC TCGAGATCAT TCTGAATAGT AGGCCTTGGG 28819 .......... .......... .......... .......... .......... .......... 360 AAAGAACAAA AGATGAAAAC AAGAAATATT TTCAAGAATC CCATGGCTGC TAATACAAGA 28879 .......... .......... .......... .......... .......... .......... 360 ACTGATTATG TTTTTAGAAA GTTTATTTGA TGAATTTATC TGCTTTGAAG CAACTCTATT 28939 .......... .......... .......... .......... .......... .......... 360 TATAGTGTTT TGTTAGTGAC CTATTCAATT TCTAGAAAAA AAACTATTAT ATTGTGGCAA 28999 .......... .......... .......... .......... .......... .......... 360 AAAGACCATG TGGAGAAGAA AAGAAAGGTT AGTAGTGTGA ATGAGACTAG CTAAATTGAA 29059 .......... .......... .......... .......... .......... .......... 360 CTATATTCTA TAGTTTTATT CTTCTTTATT TTCTTTTCTT CCCTAAAAGG GAAAAGAGTC 29119 .......... .......... .......... .......... .......... .......... 360 AAATATGTCA TCGAGCTTTA ATTAATGGCT CATCTATGAC ATCCGTTAAA AATAATTTAT 29179 .......... .......... .......... .......... .......... .......... 360 TTTTTTTCCT TAAAAGGAAA AGCCTTAAAA TATCGCCAAG CTTTATGAAA GGTCTTATAC 29239 ||| | || || | |||| ||| || || || .......... ......GAAT A-CCAAAAGA TATCTTAAAG TTTAATTTAA A......... 394 ATGATATTCG TTAAAAGTTT GACTTATCTA TGTTATTTAC AGTTGAGAAA AGGCTCATCC 29299 .......... .......... .......... .......... .......... .......... 394 ATGCACTTCA ATGCGATAAG AACATTAGAA AAATGACTTA TTCAATCAAA GTGGACCAAG 29359 .......... .......... .......... .......... .......... .......... 394 GTAAAAAAAG TTGGTACTTT TTAAAGCGAG ATAAATTCAT CTAATTTTTT ATTTAATTCA 29419 .......... .......... .......... .......... .......... .......... 394 ATTTCATTGG GCGTGCATAA AGGGGTTGAT TAAGAATGAG AATATCTATT TATGTAGATT 29479 .......... .......... .......... .......... .......... .......... 394 TCAACGATCC TTACTCTATT AACTAGTTTT AAGGGTTTAG GTACGAAAAA ATCATTTCTA 29539 | || | | ||| .......... .......... ......TATT TGGAGGTTAT .......... .......... 408 ATTATATTAG AGTTATATTC ATCCTAATTC TTGATTCATT TCATTTCACT TGGCGAGTAG 29599 .......... .......... .......... .......... .......... .......... 408 AAAAATTATT AAGAATGAGA ACATCTCTTT ATATGAATTT AAACAACCCT TACTCTAATA 29659 .......... .......... .......... .......... .......... .......... 408 ACTAGTTGTA AGGGTTTAGG TAGGGAAAAT TCATTTCTTA GTATAATAAT GCCACCAATA 29719 .......... .......... .......... .......... .......... .......... 408 CATGATGGGC CACACGCAAA TAGCAACAAT GCATTCTATA ATTCTAGTTC TTTTTTTTCT 29779 .......... .......... .......... .......... .......... .......... 408 TTTTTTGAAA ATTATAACAA AACAAAATAT GTATTGGTTA ATTTCATTTC TTTGCAAGAC 29839 .......... .......... .......... .......... .......... .......... 408 AATATGTACC ATGGATGATG TACATTAGTC CCCTTCAATA ATATGTTAAA AAATAAAAGT 29899 .......... .......... .......... .......... .......... .......... 408 TCAATCGATT TCTAGGAAAT TCATAGGATA TGTCTCCATT ATTTTAATTG TCCTATTAAT 29959 .......... .......... .......... .......... .......... .......... 408 AATTTTAGCA TTGACGTCAC AATTACTTTT TGAAGTCACC AAAGACTAAG ACTTTATATT 30019 .......... .......... .......... .......... .......... .......... 408 TGAAGTCACT GTCAATATTC TGGATCAAAG GGTGTGTTAT TATGTAGGTG ACAACAAATT 30079 .......... .......... .......... .......... .......... .......... 408 TCCCAAATTT AAGTATGAAC TGAGATTCTT ACTCGGTCAC TTAACTAATA TTTATTATCT 30139 .......... .......... .......... .......... .......... .......... 408 CGAGAAGTCA CTTTATTTGT CGAACAAAAA TGAAATCAAG AAGAAAAGTT AAGCAGAGCA 30199 .......... .......... .......... .......... .......... .......... 408 AGGACACTAA TATCAAAGAG GATATGCTTT TGCTTTCTTC AATCAGCTGT GAACATAAAG 30259 .......... .......... .......... .......... .......... .......... 408 TTTATTGTTT TAACAATGAA AAAAGTAACA GAACGTTTAT TGTGTAATCA AACAGCATTT 30319 .......... .......... .......... .......... .......... .......... 408 TCAAATGTTT GAATACTTTG TGCACTTACT TAGCCAATGC CAACACAACT GCAATTGGAC 30379 .......... .......... .......... .......... .......... .......... 408 TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC CTCAACAACC CCAGACATTG 30439 .......... .......... .......... .......... .......... .......... 408 AGCTGTTAAT TGTCTTGGAA AATGTCACTT GGTATGTTAG CTTCTGGTTC AACTCCGAGA 30499 .......... .......... .......... .......... .......... .......... 408 AATTTAGCTT GCTGGGCTTA ACTTTCACGA CAACGCCTTT AGGTGAAGCT ATCTGCACCG 30559 .......... .......... .......... .......... .......... .......... 408 TGTAAGATGA TTTGGCATCA CCAACATTGG TCACAGTTCT GGTGTATGTC TGAGGAGTTG 30619 .......... .......... .......... .......... .......... .......... 408 ATCCAAGTCT CGATATGCAA AATGAAGGAT AGTTTAATTG TGCTTCAGGG ATACTTTCAA 30679 .......... .......... .......... .......... .......... .......... 408 CCTCCGAGCA ATTCACCCTG CGTCGTAACA ATTTACCTAC CTGTGGATTT GTGTAGTTCA 30739 .......... .......... .......... .......... .......... .......... 408 AACCACATAA ATAAGGTACA TAATCCTCAA ATGGGGTATC ATAAACTAGT CCTGGATCAT 30799 .......... .......... .......... .......... .......... .......... 408 TTGCCCTCGA TGGATTAACA TGTCCTGCAC CTATTGCATA GATATCAGCA GGACGGAGCC 30859 .......... .......... .......... .......... .......... .......... 408 TTTGGTCGAG TATTGGACTA CTGGCAAGGT TTAATGTGTC AGCGGTTGTC ATCATTGCAG 30919 .......... .......... .......... .......... .......... .......... 408 ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTTCTCTT CAGCAGAGCT GCTACCCCAC 30979 .......... .......... .......... .......... .......... .......... 408 TAAGGTGTGG GCAAGACATC GAGGTGCCTG ATATAATATT GAATGTGGAT TTGGTGTCCT 31039 .......... .......... .......... .......... .......... .......... 408 TGTTGTCATC CACAGAAGTA GGCCAAGCAG CGAGGATATT AACACCAGGA CCAATTATGT 31099 .......... .......... .......... .......... .......... .......... 408 CAGGTTTCAA GATCCCAGGA TTAGGTTTAC TTGGTCCGCG AGAAGAAAAT GCAGCAACTA 31159 .......... .......... .......... .......... .......... .......... 408 TTGGAGCATT TTTATCTCCA ATTACTGTTC CTTGGATTGT GATTGTAGCA ACAGGGTTCG 31219 .......... .......... .......... .......... .......... .......... 408 ATATTGAGTT TGTATAGGCA CGAATTTTGC TTCCATCTGC AGCTGAAACA ACCAATGCTG 31279 .......... .......... .......... .......... .......... .......... 408 GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG TGATGGGTTG ATGACAATCA 31339 .......... .......... .......... .......... .......... .......... 408 TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC AACATTGGCT ACACCGCCGA 31399 .......... .......... .......... .......... .......... .......... 408 ATGCTAAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC AGTGAGTGAC CCTCGTCTGC 31459 .......... .......... .......... .......... .......... .......... 408 AATAAGGGGT TTCAGATGGA TCTTTTGCAT TTTTTGCAGC ATCAAATAGA GTGAAGAATG 31519 .......... .......... .......... .......... .......... .......... 408 TTGAGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC AAATTCCTCT CCATTTCCGA 31579 .......... .......... .......... .......... .......... .......... 408 GCTTAGCAGT AGCTTTTATC TTTCTATCAA GCGTGCTGGC ACCTACTGTA AGAATCCAAG 31639 .......... .......... .......... .......... .......... .......... 408 GGGCTGAGTT ATCTACTGAG GCAGGCGAAG GACCATTATT GCCTGCTGAG CAACTAACAA 31699 .......... .......... .......... .......... .......... .......... 408 GAATGCCTCT TTGTGTTGCA CTGTACGCCC CGAGAGCAAT ACTTTCATCA TAAAGAGGTC 31759 .......... .......... .......... .......... .......... .......... 408 TCAGAGATCC ACCAATGGAT ATAGAAAGAA TATCTACTCC ATCATCTATA GCTGAATCCA 31819 .......... .......... .......... .......... .......... .......... 408 TGGCAGCTAA AATATCACTG TCAGAACAAC CAACAGAGTT ACACACCTTA TATATGGCTA 31879 .......... .......... .......... .......... .......... .......... 408 TATGGGCAAG AGGAGCAACA CCAACTGCAG TTCCATTAGC ATTTTCATAT ACATTAGCAC 31939 .......... .......... .......... .......... .......... .......... 408 CTTTCACAAA AGCCCCCGCA GCTGTGCTTG CTGTGTGTGT ACCATGTCCA TCATCGTCTA 31999 .......... .......... .......... .......... .......... .......... 408 TCGGGGAACC ATTGCCAAGT TTGTAAGACC TGGCTCCAAT GAGCTTGTTG TTACACTTGT 32059 .......... .......... .......... .......... .......... .......... 408 TGGTGAAATT GGGCTCACAA ACTCCTTTCC ACTTAGCAGG CGGGGGAGGC ATCCCAACAT 32119 .......... .......... .......... .......... .......... .......... 408 CGCTAAATGA AGGATGATCA GGAAGAATTC CAGTGTCTAG AACTCCGATG ATCACGCCTT 32179 .......... .......... .......... .......... .......... .......... 408 CTCCAAAATT GGAATCTTTC CACAAGCCCA TGTTCTGCTG CAAACCAAGA AAACTTGGAG 32239 .......... .......... .......... .......... .......... .......... 408 TATGAGTAGT GTGCAAAGAC AAAATCCTCT GTTTCTGAGC AGAGACAAAG CCGTGTTTTT 32299 .......... .......... .......... .......... .......... .......... 408 TCTCCATTTC CTTCACTTGT TCTGCAGTTA ATCTTGCTGC AAACCCTGTC ATCACATTGT 32359 .......... .......... .......... .......... .......... .......... 408 GATAAGAATA GATCATTGTA GCAGCCTCTT CATTTCCACT AGAGCTAATT GCGGTAGTAG 32419 .......... .......... .......... .......... .......... .......... 408 TTTTAGGCAA AAAAGAAAGG TAATAGCTAT CTAAATCCAT TAACGATGAT TGAGCAGTAA 32479 .......... .......... .......... .......... .......... .......... 408 TTAGGCTTTC AGGGGATTCA ACATGGACGA TATAAGTCTC GAGATTACTC TGAATAGTAG 32539 .......... .......... .......... .......... .......... .......... 408 GCCATGGGAA TGAACAAAAG ATGAAAACAA AAAGGATTTT CAAGAATCCC ATGGCTGCAA 32599 .......... .......... .......... .......... .......... .......... 408 ATATAAGAAG TGCTGATGTA TTTGGACAGT GTATTTGATG AATTTTTCTG CTTTTGAAGC 32659 .......... .......... .......... .......... .......... .......... 408 AACTCTCTAT TTATAGTGTT TTATTATTGA CCTATTCAAC TTCTAGAAAA ATTATTGTGG 32719 .......... .......... .......... .......... .......... .......... 408 AAAAAAGACC ATGTGTATGA ACAAAATTAT CACTTCTAGT GTCAGAAAAT TATATTCTAT 32779 .......... .......... .......... .......... .......... .......... 408 AGTTTTATTT TCCAAATGAC ATCCACTATA ATATATTTAA TGTTAAACAA TCACTTTGTT 32839 .......... .......... .......... .......... .......... .......... 408 ATAAAAAAAG TTGCAAGTGT TCGAAAACAT GCAGCTATTT CGGATCCTTC TTGGAAGAGT 32899 .......... .......... .......... .......... .......... .......... 408 AAACATCCAT TCAAGGATTT AAAACTAAAA TTTGCAGATA TATAATATAT GTACCTAGTC 32959 .......... .......... .......... .......... .......... .......... 408 TATGAATAAT AAGTGTAAAA TAGTGAAAAG TATTAGTATT ATTCTTCTTT AATTTCTTTT 33019 .......... .......... .......... .......... .......... .......... 408 ATCCCTAAAA GGAAAATCGC TCAAATTTGT TAATGAACTT TAGGAAAAAA GCTCATTTTA 33079 .......... .......... .......... .......... .......... .......... 408 TAACATCTGT TAAAAGTTTG AATTATCTAT GTCATTTTCG ATTGAGAAAA GGCACATCGA 33139 .......... .......... .......... .......... .......... .......... 408 TGCACTTGAA TGTGATAAAA GAACATTAGA AACATGCCAC ATTCAATAGA GGTATACCAA 33199 .......... .......... .......... .......... .......... .......... 408 GGTGAAAGTA GGTACTTTCT AATGCGAGAA CCATCCGAGA AATAAAACTG AAATTATCTA 33259 .......... .......... .......... .......... .......... .......... 408 ATTACATAAA TATTTCTATA ATATTTACTA GTTTTCTTTA TAGTTTGAAA TAATTATGTA 33319 .......... .......... .......... .......... .......... .......... 408 TATATAGTTT CACTAATTTA CAGTTTCATT ACAGATATTA AGTCAGATAC ACTAATCTAT 33379 .......... .......... .......... .......... .......... .......... 408 ATATATATAT ATATATATAT ATATATATAT GTATTTTTGC TACCAAATAA AAAAAATAGT 33439 .......... .......... .......... .......... .......... .......... 408 GAGAAATACG AGCGAAAAAA AGAAAGAGGC GACCGAAATA CCCAAATATA TGTGACTCAT 33499 .......... .......... .......... .......... .......... .......... 408 CCCCATAAAC ATCATGAAAA TCGTATTAAC TACATGTCTA CAGGAGATAA GAAAGAGGCG 33559 || ||| |||| || .......... .......... .......... .......... ...GA-ATAT GAAA-AG... 420 AGTGAGATAA TCACATACAT GTCAATCGAT AGAAAATTAC ACTTAATTTA AATTTTAACT 33619 .......... .......... .......... .......... .......... .......... 420 TCATATATTA TTTGAACTTC TAAACTATTA TTATCATAAT AATTTCTCGT ATAATTGGCG 33679 .......... .......... .......... .......... .......... .......... 420 TATACTAATC ATCAAACTCA TTTACCTAAC AAAAGTTGAC CCAAGACTTA ATATCCCAAC 33739 .......... .......... .......... .......... .......... .......... 420 ACAACTTAAA CTTTTATTTA TTTTGTGTTG TGTTTTTATA TGTGGAAATC CATATTTATC 33799 .......... .......... .......... .......... .......... .......... 420 TATTTATTCC TTTGAATTAC TGCAGAAATT CCTAGAGAAA ATTGGCACTA CATTTCAGTC 33859 .......... .......... .......... .......... .......... .......... 420 CACTTGATTA CTTGTGGGGG CACCAAAGGA CCAACAGGGG CTGCTAGAAA AAAATATTGT 33919 .......... .......... .......... .......... .......... .......... 420 CTTTACATGT GGAAATCCAA GGAATAAAAC TGATAGTGGA TAGATATATA ATATACTCAC 33979 .......... .......... .......... .......... .......... .......... 420 ATTCGTCCCA TTTTATATGA CATTATTTGA CCTGACA-CA TAGTTCAAAA AATAAATGAA 34038 | | ||||| || || || | | .......... .......... .......... ......ATGA TAGTTATGAA TATTAA-G-A 442 ATGTTGTGCG AAATTCGAGA TAATACGAGA AAATATAAAC GCGAAAAACA AGACAATAGA 34098 ||||||||| ||||| |||| |||||||||| |||| GTGTTGTGCG AAATTTGAGA TAATACGAGA AAAT...... .......... .......... 476 TTTACGTGGT TCACCAATAA GTTGGCTACG TCCACGGAAA GAGGGGAGCA GTTTTATTAT 34158 .......... .......... .......... .......... .......... .......... 476 GGAAAGGCAA AAATAGAATT ACAGAATAGG GTTTGTCATA GCGTCTATAT ATAGTGCTAA 34218 .......... .......... .......... .......... .......... .......... 476 GCTATGCCCT AACAGGCTTG GGCCCAAAAT ACATAATTGA CAGATAACTA AGGGCTCAAT 34278 .......... .......... .......... .......... .......... .......... 476 TCAAGGCATT CAACAAATCT CCACCTTGAC TTGAATTCTC CAAACAGATT CTTCAGACGC 34338 .......... .......... .......... .......... .......... .......... 476 ACTATGATAG TGCCAGGCCT CCCCCTCTTC CTCAGAATTG CCCCGCAGGG CAATTAACAG 34398 .......... .......... .......... .......... .......... .......... 476 CTTCTGATGT TGAGCAAGTC CAAACAGTGT TGAAACTTGC TCTGTGGAAC CGGCTTTGTG 34458 .......... .......... .......... .......... .......... .......... 476 AACATATCAG CAAGATTATC AGCAGTTCCT ACTTTCTTCA CCTTGATTCT CTTCTCACTT 34518 .......... .......... .......... .......... .......... .......... 476 CTCAGAAAAT GATACCTCAC GTTCAAAGCA GACATCTCGA AATTCTCCAA GAACACCGAT 34578 .......... .......... .......... .......... .......... .......... 476 TAACCGGGAG GCTCTGATAC CAATTTATTA TGCGGAATTC GAGATAATAC GAGAAAATAT 34638 |||| .......... .......... .......... .......... .......... ......ATAT 480 AAACGCGAAA AACAAGACAA CAGATTTACG TGGTTCACCA ATAAGTTGGC TACGTCCACG 34698 |||||||||| | ||||||| ||| |||||| |||||||||| |||| ||||| |||||||||| AAACGCGAAA ACCAAGACAC CAGTTTTACG TGGTTCACCA ATAAATTGGC TACGTCCACG 540 GAAAGAG-GG GAGCAGTTTT ATTACGGAAA GGCAAAAACA GAATTACAGA ATAGGGTTTG 34757 | ||||| || ||||| |||| |||| ||| | |||||||||| |||||||||| |||||||||| GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA ATAGGGTTTG 600 TCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAACAG G 34798 ||||||||| |||||||||| |||||||||| |||||| || | CCATAGCGTC TATATATAGT GCTAAGCTAC ACCCTAAAAG G 641 hqPGS_C08HBa0165B06.1+_SGN-E301078- (34016 34072,34635 34798) ******************************************************************************** EST sequence 1 +strand 709 n (File: SGN-E376168+) 1 CGGGCAGGTC AGAAAAACAC TCCTGGATCC GACAAGCCTG CATTTACTTC TGAAGAAGTA 61 TATGTAAAGG TTTTTGATCT TCAAGACAAG GTTAACAAGG TAAATAAAAT ACCAAAGCCA 121 AAGCCTAAGG TTGAGAAGCC TTTGAAAAAT GAAACTGAAA ACAGCAAGGA GAAAGCAGAC 181 ACTACCAAAT CCTCTTCTGA GGAGGGTACC TCCCAGAAAG AACAAACAGC TTCAGAGGCA 241 GAGAAGCCAT CTGCAGATGA AAACTCGGAT CATGATGAGT TATGATTATT ATCCTACAAC 301 GATACATTGA AGGCTAGATA TATGCAAATT GCCAAGAGGA AGAGACGGAA ACTTAATTTG 361 TAGAGTATAT ACTGAGTGAA ACCATAGGAT GCTTTTTCTT GCCATGCTTT GGAAGTCCCC 421 ACTCTCCGGG CTGTCTCGGG TTCAAATAGT ACCTCGGGGC CGAGGTACAA GCTTTTTCTT 481 TTTTTTTTTT TTTTTTTTGT TTTATTGTTT TAACAATGAA AAAAGTAACA GAACGTTTAT 541 TGTGTAATCA AACAGCATTT TCAAATGTTT GAATACTTTG TGCACTTACT TAGCCAATGC 601 CAACACAACT GCAATTGGAC TTCTCACAGA GTGCCTGTTA GAATTCCACT TCAAGAATCC 661 CTCAACAACC CCAGACATTG AGCTGTTAAT TGTCTTGGAA AATGTCACT Predicted gene structure (within gDNA segment 35470 to 44429): Exon 1 36451 36488 ( 38 n); cDNA 473 509 ( 37 n); score: 0.737 Intron 1 36489 38104 (1616 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.79) Exon 2 38105 38167 ( 63 n); cDNA 510 572 ( 63 n); score: 0.722 Intron 2 38168 38343 ( 176 n); Pd: 0.900 (s: 0.74), Pa: 0.982 (s: 0) Exon 3 38344 38357 ( 14 n); cDNA 573 586 ( 14 n); score: 0.643 Intron 3 38358 42722 (4365 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 4 42723 42729 ( 7 n); cDNA 587 593 ( 7 n); score: 0.714 Intron 4 42730 43307 ( 578 n); Pd: 0.796 (s: 0), Pa: 0.873 (s: 0.92) Exon 5 43308 43423 ( 116 n); cDNA 594 709 ( 116 n); score: 0.914 MATCH C08HBa0165B06.1+ SGN-E376168+ 0.846 238 0.336 C PGS_C08HBa0165B06.1+_SGN-E376168+ (36451 36488,38105 38167,38344 38357,42723 42729,43308 43423) Alignment (genomic DNA sequence = upper lines): TTTTTATTAT TATTATTATT ATTATTATTA TTATTATTAT TATGATATTG AGTCAAATCC 36510 ||||| || | | || || || || || || ||||| || TTTTTCTTTT TTTTTTTTTT TTTTTTGTT- TTATTGTT.. .......... .......... 509 ATTCATACTT TTTATTCATT CAATTTCATT TAGCGTGCAG AAAGGAGTTA ATTAAGAAAA 36570 .......... .......... .......... .......... .......... .......... 509 AAAATATTTT TTTATGCGAA TTTGAACTAT CCTTACTCTA TCAATTATTG TAAGGGTTTA 36630 .......... .......... .......... .......... .......... .......... 509 GGTAGGGAAA ATTCCAAAAT TCATTTCTTA TTACATTAGA ATCATATTCG TCCTAATTCT 36690 .......... .......... .......... .......... .......... .......... 509 TGATTCATTC CATTTCACTG ATCGTACAAA AAAAGGATAA TTAAGAATAA GAATATTTAT 36750 .......... .......... .......... .......... .......... .......... 509 TATACGCATT TGAACAATCC TTCTCTATTA AGTAGTAGTA AGGGTTTAGG CAGTGCAAAT 36810 .......... .......... .......... .......... .......... .......... 509 TTATTTCTAA AAGTATAAAA TAATGCCACT AGTACATGAG GGGCAACACA CGAATAGCAA 36870 .......... .......... .......... .......... .......... .......... 509 CATTTCATTT GAATTATTAC AAATGTTTTT CCTAGGAAAA TTCATAGGAT ATTGTCTCTA 36930 .......... .......... .......... .......... .......... .......... 509 TTATTTTTCC TGTCTTATTG ATAAAGTTAA GCATTAATGT TCTAATTAAT TTTCGAAGTC 36990 .......... .......... .......... .......... .......... .......... 509 ACCAAAGACT AAGAACTTTA TTTGTTGAAA ATAATGAAAT TTACTATAAT AGAAGAGTGA 37050 .......... .......... .......... .......... .......... .......... 509 GTTTAAATTT GAGGTATCAA AATGTGTGCT TTGTCATTTC ATGATTAGTT GTTATATTTT 37110 .......... .......... .......... .......... .......... .......... 509 AAAACTTTTT TTTTTTTGGT TTATTCCATA TGTGCATAAT ATTAAGAGAG AAATTATCTG 37170 .......... .......... .......... .......... .......... .......... 509 TGCACAATTA TTAATGAATC TATTCCTTCA TATTATTAGT TTATATTTTA TTTACACACT 37230 .......... .......... .......... .......... .......... .......... 509 TTTAAAAAAA TCCTAAACAA AAAGAGTGTA TTTATTAATT TAAATCTTTT AACTCTTTTA 37290 .......... .......... .......... .......... .......... .......... 509 ATACTTTTTA GTTTAATCTA CTTTTCATTT ATCACATTTG AACTTGACAT ATCTATTAAG 37350 .......... .......... .......... .......... .......... .......... 509 AAAACAATGC TTGATATGAC TATTGAAGAT TATTTTTTCT AATACTATTT TACCACATTA 37410 .......... .......... .......... .......... .......... .......... 509 ATAATCCTAA TAATTGATGT TAGTATTGTT GAATTTTTTG TAATGTAGAA TTTTTATATT 37470 .......... .......... .......... .......... .......... .......... 509 AAATTGACAC ATCATGAAAG AACATGATTC TTATGAAAAT CATCTGATCA TGAAAGGACA 37530 .......... .......... .......... .......... .......... .......... 509 TGACTATTAT GAAAAGTCAT ATATTCATGA AAAAACATGA CTCTTATGAA AAGTCATCTC 37590 .......... .......... .......... .......... .......... .......... 509 TTAAATTCTA CAAATATAAT AAAGACTCTC TATAAGTAGT ATAAGAAAAA ATTGCATGTA 37650 .......... .......... .......... .......... .......... .......... 509 TAAATATAGG ATTTTATTGT ATCGAAGAGG GATTTGTTTG TATTTTCCAA TATGTATACG 37710 .......... .......... .......... .......... .......... .......... 509 ATGAATGTCT CTTCTTCGTC AATCACATTT CCAATTATTG TTTCTAACAA GTATTAATTC 37770 .......... .......... .......... .......... .......... .......... 509 TTGGAAAATA ATTTAGAAGT AATTAATGTT AAGAATAAAA CGCTACTAAA ATTTGAACCC 37830 .......... .......... .......... .......... .......... .......... 509 TTCATTTTAT GAAAGATTAA GCACTCATCA ACCCATTGAC TTAAATTCAA ATTATAGAAC 37890 .......... .......... .......... .......... .......... .......... 509 TATAACAAAT CATATTCAAA TTAAATGAAT TCAATTTAAT AATTATTATT TAAATTAATT 37950 .......... .......... .......... .......... .......... .......... 509 GAATTATAAT CATATTTATT TACCTAAGGC TCGTGCTTGC TATTGTCTAG TTGAAGAAGA 38010 .......... .......... .......... .......... .......... .......... 509 AAAGTTGAGC AGGGCATGGC CACTAATAGA AATTAATGTG CATTAATCAA AGAGGATATT 38070 .......... .......... .......... .......... .......... .......... 509 CTTTTGTATT TTTCAATCAG CTGTAAATAT ACAATTAATA ATGTAAA-AG TAACATAAAA 38129 |||| | ||| ||| || ||||| || .......... .......... .......... ....TTAACA ATGAAAAAAG TAACAGAACG 535 TATATTGTGA AAACAAACAG CATTTTCACT ACAATCAAAT GTCCTTATGC ACTTATAAAG 38189 | ||||||| || ||||||| |||||||| | | | TTTATTGTGT AATCAAACAG CATTTTCA-A ATGTTTGA.. .......... .......... 572 CCAATTTTTG ATTAGGCTAA CACAACTGCA ATTGGACTTC TCACTGAGTG CCTATTAGAA 38249 .......... .......... .......... .......... .......... .......... 572 GTCCATTTCA AGAATCCATC AACAATCACA AAGTTTGAGC TGTTGGTTCT TTTGGAAAAT 38309 .......... .......... .......... .......... .......... .......... 572 GTCACTTGGT ATGTTAACTT CTGGTTCAAC TCAGAGAAAT TGAGCTCTGT GGGCTTAACT 38369 | | | || || || .......... .......... .......... ....ATACTT TGTGCACT.. .......... 586 TCCACGGCAA CGCCTTTTGG TGAAGCTACC TCCACTTTGT AAGATGATGT TGCGTCACCA 38429 .......... .......... .......... .......... .......... .......... 586 ACGTTGGTCA CAGTTCTGGT ATATGTTTGA GGAGTTGATC CAAGTCTGAA TATGGAAAAT 38489 .......... .......... .......... .......... .......... .......... 586 GAAGGATAGT TTAATTGTGC TTCAGGGATA CTTTTCACCT TCAAACAATT CACCTGACGT 38549 .......... .......... .......... .......... .......... .......... 586 TGTAACATTT TACCTACCTC TCGATTGGTA TAGTTTAAAC CACAAAAATA AGGTACATAG 38609 .......... .......... .......... .......... .......... .......... 586 TCCTCAAATG GGGTATCATA AACTAGTCCT GGATCATTTG CCCTCGATGG ATTAACATGT 38669 .......... .......... .......... .......... .......... .......... 586 CCTGCACCAG TGGTAAAAAT GTCAGCAGGA AGGAGCCTTT CGTCTAGTAT TGGACTATTG 38729 .......... .......... .......... .......... .......... .......... 586 GCAAGGTTTA ACGTGTCAGC CGTTGTCATG ATTGCAGACT TAATAACAGC AGGAGACCAA 38789 .......... .......... .......... .......... .......... .......... 586 TCAGGATGTG CGCTCTTCAG CAGAGCTGCT ACACCACTAA GGTGAGGGCA AGACATTGAG 38849 .......... .......... .......... .......... .......... .......... 586 GTGCCTGATA TAATATTGAA TGTGGATTTG GTGTTTTTGT CGTCATCCAC GGGTGTAGGC 38909 .......... .......... .......... .......... .......... .......... 586 CAAGCAGCAA GGATGTTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT TCCAGGACTA 38969 .......... .......... .......... .......... .......... .......... 586 GCTCTACTTG GTCCCCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTC ATCTCCAATT 39029 .......... .......... .......... .......... .......... .......... 586 GTTGTTCCTT GGAATGTGAT TGTAGCAACA GGGTTTAATA TTGAGTTTGT ATAGGCACGA 39089 .......... .......... .......... .......... .......... .......... 586 ATTCTTAATC CATCTGCATC TGAAATATCC AATGCTGGAA GAACATGAGC ATCAGCTGTT 39149 .......... .......... .......... .......... .......... .......... 586 TTAGTGACAC CATATTGTGA TGTTTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 39209 .......... .......... .......... .......... .......... .......... 586 ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG CTAGACATAA TACTATCTTT 39269 .......... .......... .......... .......... .......... .......... 586 CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT AAGGGGTTTC CGATGGATCT 39329 .......... .......... .......... .......... .......... .......... 586 TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG AGTTGGAAAT CTGTGGACGA 39389 .......... .......... .......... .......... .......... .......... 586 TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT TAACAGTAGC TTTTATCTTT 39449 .......... .......... .......... .......... .......... .......... 586 CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG CTGCATTTCC AACTGAGGCA 39509 .......... .......... .......... .......... .......... .......... 586 AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA CACCTCTTGC CGTTGCACTG 39569 .......... .......... .......... .......... .......... .......... 586 TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG GAGATCCACC AATGGATATA 39629 .......... .......... .......... .......... .......... .......... 586 GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG CAGCTAAAAT ATCACTGTCA 39689 .......... .......... .......... .......... .......... .......... 586 GAACAACCGC CATCAGAACT ACATACCTTA TATACAGCTA TGTGGGCAAG AGGGGCAACA 39749 .......... .......... .......... .......... .......... .......... 586 CCAACTGCAG TTCCATTAGC ATTGCCATAT ACATTAGCAC CTTTCACAAA AGCTCCCGCA 39809 .......... .......... .......... .......... .......... .......... 586 GCTGTGCTTG CTGTGTGTGT ACCATGCCCA TTACCATCTA TCGGGGAACC ATTGCCAAGA 39869 .......... .......... .......... .......... .......... .......... 586 TGGTAAGACC TCGCTCCTAT GAGCTTGTTG TTACACTTGT TGATGAAGTT GGACTCACAA 39929 .......... .......... .......... .......... .......... .......... 586 ACTCCTTTCC ATTTAGCAGG CGGAGGAGGC ATTCCAACAT CACTAAACGA AGGATGGTCA 39989 .......... .......... .......... .......... .......... .......... 586 GGAAGAATTC CAGTGTCTAT AACTCCGATG ATCACGCCTT CTCCATAGTT GGAATCCTTC 40049 .......... .......... .......... .......... .......... .......... 586 CATACACCCA TGTTCTGCTG CAAACCAAGA AAACTTGGAG TATGAGTAGT ATCCAAGGAC 40109 .......... .......... .......... .......... .......... .......... 586 AAAATCCTCT GTTTCTGAGC GGAAACAAAG CCTCGTTTCT TCTCCATTTC CTTCACATGA 40169 .......... .......... .......... .......... .......... .......... 586 GATTCTGTTA ATCTTGCTGC AAATCCTTTC ATCACATTGT GATAGGAATA GATCATGGTA 40229 .......... .......... .......... .......... .......... .......... 586 GCAGCCTCTT CATTTCCACT CGAGCTAATT GCGGTAGTAG TTTTAGGCAA AAAAGAATGG 40289 .......... .......... .......... .......... .......... .......... 586 TAATAGCTGT CTAGATCCGT TAACGATGAT TTAGTAGAAA TCAGGCTTTC AGGGGATTCA 40349 .......... .......... .......... .......... .......... .......... 586 ACATGGACTA TATAAATCTC GAGACCACTC TGAATAGTCG GCCATGGGAA AGAACAAAAG 40409 .......... .......... .......... .......... .......... .......... 586 ATGAGAACAA GAAGGACTTT GAAGAATCCC ATGGCTGAAG CGATAATGTA TTTGATGAAT 40469 .......... .......... .......... .......... .......... .......... 586 TTTTCTGCTT TGATGCAACT GTCTATTTAT ACTTCATCTT TGCTCATGAC ATTATTTTAT 40529 .......... .......... .......... .......... .......... .......... 586 TCCAAGTGGA AAAAAAGAAT AATGTGGACA AGAAAATTAA AATTAATACT TAAAGGAAAA 40589 .......... .......... .......... .......... .......... .......... 586 GAAAAGAAAG GCCACTAAGA GTGAATGAAA CTAAAGTTAC ATTGAACTTT ATTCTATGAA 40649 .......... .......... .......... .......... .......... .......... 586 TTTGTAGATT TTCCAAAAGA CTTTCCACTG TAAATTTGCT TAATTATATG AACATCTTTT 40709 .......... .......... .......... .......... .......... .......... 586 TACCATACAA ATTTTAACTG TTAAATCACT TTGTAATAAA AAGTTGCAAA TATTATGTCT 40769 .......... .......... .......... .......... .......... .......... 586 AAATAAAGTT GCAATGCATG AACATGTAAC TATTCAAGAT CCTTTTCCGA GAATTAATTT 40829 .......... .......... .......... .......... .......... .......... 586 CAATAGTCAT CAATTATTTT GAACGAATAA TATATTAATA GTCTTGAAAT ATTGAGAGGA 40889 .......... .......... .......... .......... .......... .......... 586 GCTCAAATTT AAAATTCGAG GTGCTCATAG GAGATTTCAG TTGGTCGAGA TTAAAAATAT 40949 .......... .......... .......... .......... .......... .......... 586 TAATTATAAA ACTAAAATTG GTTAATTTTA AATACTAAAA TAAAAATTGG TTAATTTAAT 41009 .......... .......... .......... .......... .......... .......... 586 TTATTTGCAA GACAAAACGT GAATGATGGA TGATGTACAT TGCTCTCCTT CAATTGGACT 41069 .......... .......... .......... .......... .......... .......... 586 TGCGTGGACA TTTGACATAT ATAGTTGGTA TAACGTGAAG GGTAGAGCTA GTAACCTGCA 41129 .......... .......... .......... .......... .......... .......... 586 CGCAGATTTG ATCGAATTTA GTAGATTTTG CTCGCATACC TTAAAATCTC ATTAAATTAA 41189 .......... .......... .......... .......... .......... .......... 586 TATATGTGAG ATCATAAAAT ATTGTTATTC TACAAAGGTA TTATTTAATT CATAAATTAA 41249 .......... .......... .......... .......... .......... .......... 586 TATTTATTAA TTAAAGAGTG TTTTTGAGAT TCAATGAAGG TCAACTTTGA TTACATTAAA 41309 .......... .......... .......... .......... .......... .......... 586 ATAATTATAT CTTATTAATT TATGTATCAT ATTTATTGAA TTCACATAAG AAATAAATTT 41369 .......... .......... .......... .......... .......... .......... 586 ATTATATATA GTAAGTACAG TGAATATATC AAAATCATTA TATCTTACTA AATTATACAT 41429 .......... .......... .......... .......... .......... .......... 586 TATATTTATT GAACTTATAT TTAAAAAAAA ATCATTATAC ACAAAGTACA ATGTATATGT 41489 .......... .......... .......... .......... .......... .......... 586 ATGAATCACG GTAATATATA TATTTTTTTT TAATGATTCA TTATAAAATA AATTCAAAAA 41549 .......... .......... .......... .......... .......... .......... 586 TTCAGTGATT CATCGTAAAA ACAAATTCAC TATATATAAT GGTCATTGTT TCTTAATAAC 41609 .......... .......... .......... .......... .......... .......... 586 AAAATATTAT TCAATGTATC TTCACAAGAA ATATTCAATG TACGATGATG AGAGAATAAA 41669 .......... .......... .......... .......... .......... .......... 586 TTATATAAGC AACATAGGAA ATTTTTGTAA CCATATGCAT AAATGGTTTC TCATTTAAAA 41729 .......... .......... .......... .......... .......... .......... 586 TGTGTCAACA TAGGAGGCGC ACTCAGGAAG ATAATTTGTA GTCGTGACAA CACTAGAATT 41789 .......... .......... .......... .......... .......... .......... 586 TTTGGATGCA ATAAAAAAAT TAGACATGAA TTTAACTAGA TTTAAATTTG TAAGAAAGAT 41849 .......... .......... .......... .......... .......... .......... 586 AATAAAATCA CATTTCACTT AAATTATCTT AGATATATTC ATATTTTTAA AGATAATATT 41909 .......... .......... .......... .......... .......... .......... 586 AGTGGGATAG TATATTTATA TAGGGTCTTC TGAAAATATA TTGTCATATT ATCATATTGA 41969 .......... .......... .......... .......... .......... .......... 586 AATGAGTGAT TTTTTTCATT GACACAAATC AAGACATGAA AAAACCTATT GTCTTGGATA 42029 .......... .......... .......... .......... .......... .......... 586 AACTATTAAT ATACCGAATA TTAATTTAGT ACTATTATAT TATATTTGTG TTAGTAAGTC 42089 .......... .......... .......... .......... .......... .......... 586 TATTTGGCCA CAATATGTTA ATAAAAAATA TCCATGTGAA TTAATTACAA CGTCTTTTGC 42149 .......... .......... .......... .......... .......... .......... 586 AGGAAATTCG AAGTTTTTTT TTTTTTTTGG TCATCATATG AATAAGCTAA GCATCAACAA 42209 .......... .......... .......... .......... .......... .......... 586 GTTAATGTTA TTCTTCGATC AATCCTCTTT AATTTGATTT TATAATTTAT CCTTTTGCTT 42269 .......... .......... .......... .......... .......... .......... 586 AAAGAAAGTG TCACTATTTC ATATTTTTAG AGAATCAAAT GAACATCAAC TCTTAAAGTG 42329 .......... .......... .......... .......... .......... .......... 586 TTGAGTCCCT ATATCATAAT CAAATCTTTT CTATATATAT ATATATATAC AAAAGATATA 42389 .......... .......... .......... .......... .......... .......... 586 CAATTCAATA AGAGCTAGCG AACAACAAAA CTGTTTGGAA TGATTAGAGA AGATTTGAGT 42449 .......... .......... .......... .......... .......... .......... 586 TGGTTAAGAA TTTAAGATTC AAGAAAACAC ATTATTGAGG AAGATGAATT GATACAATGT 42509 .......... .......... .......... .......... .......... .......... 586 ATAAATACTA TATATACATA ATTATACATT ATTCATACAA ATATCGATAT ATTACATATA 42569 .......... .......... .......... .......... .......... .......... 586 CTACGACCAT TTTAGTAAGA AAGTTTTTTT TGTCGGGTGT ACATTTACAT AAGAAGCCCC 42629 .......... .......... .......... .......... .......... .......... 586 TCCTCCTCGT GAGTTATTTT GAGGCCGAGT ATTAAGAATG AATTCTTCTT CATATGGATT 42689 .......... .......... .......... .......... .......... .......... 586 TGAACAATCC TTACTCTATT AACTAATCGT AAGGATTTAG GTAGGGCAAA TTCATTTCTT 42749 | |||| .......... .......... .......... ...TACTTAG .......... .......... 593 ATTATATTAG TCATATTTGT CTTTAATTCT TGATTCATTC CATTTCATTG GGGGTGCAGA 42809 .......... .......... .......... .......... .......... .......... 593 AAGGGGCTAA TTGAGAATGA GAATCTTTTT TTTTATATAA GGATTTGAAC GAACCTTACT 42869 .......... .......... .......... .......... .......... .......... 593 CTATTAACTA GTTGTAAGGG TTTACGTAAC ATTACAACGT AACAGTTTTT CCAGGAAATT 42929 .......... .......... .......... .......... .......... .......... 593 CATAGGATAT GTCTCTATTA TTTTTCTTGT CTTATTAATA AGTTTGAAGT CACCAAAGAC 42989 .......... .......... .......... .......... .......... .......... 593 TAAGACTTTA TTTTTGAAGT CACTGTCAAG ATTCTGGATC AAAGGGTGCT TAATTATGAA 43049 .......... .......... .......... .......... .......... .......... 593 CTGAGATTCT TTTACGGTCA CTCAACTAAT ATTTATTATC TCGAGAAGTC ATTTTATTTG 43109 .......... .......... .......... .......... .......... .......... 593 TTGAAAAAAA TGAAATCAAG AAGAAAGGTT GAGCAGGGCA TGGTCACTAA TATCAAAGAG 43169 .......... .......... .......... .......... .......... .......... 593 GATATGCTTT TGCATTCTTC AATCAGCTGA GAACGTAAAG TTTATTGAAA CAATACATTT 43229 .......... .......... .......... .......... .......... .......... 593 AATAATATAT ATGAAAAAAG TAACATAAAG TTAATTGTGT AAACAAACAG CATTTTCAAA 43289 .......... .......... .......... .......... .......... .......... 593 TGTCTGAATA CTTTGTAGCC AATGCAAACT CAACTGCAAT TGGACTTCTC ACAGAGTACT 43349 || ||||| ||| |||||||||| |||||||||| ||||||| | .......... ........CC AATGCCAACA CAACTGCAAT TGGACTTCTC ACAGAGTGCC 635 TGTTAGAATT CCACTTCAAG AATCCCTCAA AGACCCCAGA CTTTGAGCTG TTGGTTCTCT 43409 |||||||||| |||||||||| |||||||||| |||||||| | |||||||| || || ||| TGTTAGAATT CCACTTCAAG AATCCCTCAA CAACCCCAGA CATTGAGCTG TTAATTGTCT 695 TGGAAAATGT CACT 43423 |||||||||| |||| TGGAAAATGT CACT 709 hqPGS_C08HBa0165B06.1+_SGN-E376168+ (36451 36488,38105 38167,38344 38357,42723 42729,43308 43423) ******************************************************************************** EST sequence 317 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 36191 to 39965): Exon 1 38208 38591 ( 384 n); cDNA 58 441 ( 384 n); score: 0.854 PPA cDNA 11 1 MATCH C08HBa0165B06.1+ SGN-E307529- 0.854 384 0.871 C PGS_C08HBa0165B06.1+_SGN-E307529- (38208 38591) Alignment (genomic DNA sequence = upper lines): AACACAACTG CAATTGGACT TCTCACTGAG TGCCTATTAG AAGTCCATTT CAAGAATCCA 38267 || ||||||| |||||||||| |||||| ||| |||||| ||| ||||||| || ||||||||| AATACAACTG CAATTGGACT TCTCACAGAG TGCCTAGTAG AAGTCCACTT CAAGAATCCC 117 TCAACAATCA CAAAGTTTGA GCTGTTGGTT CTTTTGGAAA ATGTCACTTG GTATGTTAAC 38327 ||||||| || ||| | ||| ||| ||||| | ||||||| |||||||||| |||||||||| TCAACAACCA CAACTTCTGA ACTGCTGGTT GTCTTGGAAA ATGTCACTTG GTATGTTAAC 177 TTCTGGTTCA ACTCAGAGAA ATTGAGCTCT GTGGGCTTAA CTTCCACGGC AACGCCTTTT 38387 |||||||||| ||| ||||| ||| || ||| ||||| || |||| | ||| ||| ||| | TTCTGGTTCA ACTTGGAGAA ATTTAGTTCT GTGGGTACAA CTTCTATGGC AACTCCTATA 237 GGTGAAGCTA CCTCCACTTT GTAAGATGAT GTTGCGTCAC CAACGTTGGT CACAGTTCTG 38447 |||||||||| ||||||||| |||||||||| | | |||| |||||||||| ||||||||| GGTGAAGCTA TCTCCACTTT GTAAGATGAT GCAACATCAC CAACGTTGGT CACAGTTCTT 297 GTATATGTTT GAGGAGTTGA TCCAAGTCTG AATATGGAAA ATGAAGGATA GTTTAATTGT 38507 || ||||| | |||||||||| |||||||| |||||||||| | |||||||| |||||||| | GTGTATGTCT GAGGAGTTGA TCCAAGTCCA AATATGGAAA ACGAAGGATA GTTTAATTCT 357 GCTTCAGGGA TACTTTTCAC CTTCAAACAA TTCACCTGAC GTTGTAACAT TTTACCTACC 38567 |||||||||| |||| || || | || ||| || |||| | ||||||||| ||||| |||| GCTTCAGGGA TACTCTTTAC TTCTAAGCAA TTTACCTTGC GTTGTAACAG TTTACTTACC 417 TCTCGATTGG TATAGTTTAA ACCA 38591 | | ||| | | || | || |||| TGTGCATTTG TGTACCTCAA ACCA 441 hqPGS_C08HBa0165B06.1+_SGN-E307529- (38208 38591) ******************************************************************************** EST sequence 341 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 35803 to 39449): Exon 1 38231 38804 ( 574 n); cDNA 1 574 ( 574 n); score: 0.880 MATCH C08HBa0165B06.1+ SGN-E207413- 0.880 574 1.000 C PGS_C08HBa0165B06.1+_SGN-E207413- (38231 38804) Alignment (genomic DNA sequence = upper lines): CACTGAGTGC CTATTAGAAG TCCATTTCAA GAATCCATCA ACAATCACAA AGTTTGAGCT 38290 ||| |||||| || |||||| |||| ||||| |||||| ||| |||| | || | ||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 GTTGGTTCTT TTGGAAAATG TCACTTGGTA TGTTAACTTC TGGTTCAACT CAGAGAAATT 38350 ||| || | |||||||||| |||||||||| ||||| |||| |||||||||| | |||||||| GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 GAGCTCTGTG GGCTTAACTT CCACGGCAAC GCCTTTTGGT GAAGCTACCT CCACTTTGTA 38410 |||| || |||||||||| |||| |||| |||||| ||| ||||||| || ||| |||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATGTT GCGTCACCAA CGTTGGTCAC AGTTCTGGTA TATGTTTGAG GAGTTGATCC 38470 ||||||| | || ||||||| | |||||||| ||||||||| ||||| |||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAGTCTGAAT ATGGAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTTCACCTT 38530 |||||| || ||| |||||| |||||||||| |||||||||| |||||||||| ||| |||| AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 300 CAAACAATTC ACCTGACGTT GTAACATTTT ACCTACCTCT CGATTGGTAT AGTTTAAACC 38590 | | |||||| ||| ||| |||||| ||| |||||||| | |||| || | |||| ||||| CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 360 ACAAAAATAA GGTACATAGT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 38650 ||| |||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 420 CCTCGATGGA TTAACATGTC CTGCACCAGT GGTAAAAATG TCAGCAGGAA GGAGCCTTTC 38710 |||||||||| |||||||||| ||||||| | | | | || ||||||||| ||||||||| CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 480 GTCTAGTATT GGACTATTGG CAAGGTTTAA CGTGTCAGCC GTTGTCATGA TTGCAGACTT 38770 ||| |||||| |||||| ||| |||||||||| |||||||| |||||||| | |||||||||| GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 540 AATAACAGCA GGAGACCAAT CAGGATGTGC GCTC 38804 |||||||||| |||||||||| ||||||||| ||| AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC 574 hqPGS_C08HBa0165B06.1+_SGN-E207413- (38231 38804) ******************************************************************************** EST sequence 106 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 37267 to 39878): Exon 1 38335 38777 ( 443 n); cDNA 1 443 ( 443 n); score: 0.894 MATCH C08HBa0165B06.1+ SGN-E287935+ 0.894 443 0.899 C PGS_C08HBa0165B06.1+_SGN-E287935+ (38335 38777) Alignment (genomic DNA sequence = upper lines): TCAACTCAGA GAAATTGAGC TCTGTGGGCT TAACTTCCAC GGCAACGCCT TTTGGTGAAG 38394 ||||||| || |||||| ||| || | ||| | |||||| | |||||||||| | |||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTACCTCCAC TTTGTAAGAT GATGTTGCGT CACCAACGTT GGTCACAGTT CTGGTATATG 38454 |||||||||| |||||||||| ||||| || | ||||||| || ||| |||||| |||||||||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TTTGAGGAGT TGATCCAAGT CTGAATATGG AAAATGAAGG ATAGTTTAAT TGTGCTTCAG 38514 | |||||||| |||||||||| | ||||||| |||| ||||| |||||||||| ||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATACTTTT CACCTTCAAA CAATTCACCT GACGTTGTAA CATTTTACCT ACCTCTCGAT 38574 |||||||||| ||||| | | ||||||||| ||||||| || |||||| |||| | ||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TGGTATAGTT TAAACCACAA AAATAAGGTA CATAGTCCTC AAATGGGGTA TCATAAACTA 38634 || || || |||||||| |||||||||| |||||||||| ||||| ||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCAGTGGTA AAAATGTCAG 38694 |||||||||| ||||||||| |||||||||| |||||||||| |||| | | | | ||||||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TATTGGCAAG GTTTAACGTG TCAGCCGTTG 38754 |||||||||| |||||| || |||||||||| |||| ||||| |||||||||| |||||||||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATGATTGC AGACTTAATA ACA 38777 |||| ||||| |||||||||| ||| TCATCATTGC AGACTTAATA ACA 443 hqPGS_C08HBa0165B06.1+_SGN-E287935+ (38335 38777) ******************************************************************************** EST sequence 177 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 37851 to 39712): Exon 1 38461 39092 ( 632 n); cDNA 1 632 ( 632 n); score: 0.907 MATCH C08HBa0165B06.1+ SGN-E213088- 0.907 632 0.997 C PGS_C08HBa0165B06.1+_SGN-E213088- (38461 39092) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTCTGAAT ATGGAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 38520 |||||||||| |||||| || ||| |||||| |||||||||| |||||||||| |||||||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTTCACCTT CAAACAATTC ACCTGACGTT GTAACATTTT ACCTACCTCT CGATTGGTAT 38580 ||| |||| | | |||||| ||| ||| |||||| ||| |||||||| | |||| || | TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTTAAACC ACAAAAATAA GGTACATAGT CCTCAAATGG GGTATCATAA ACTAGTCCTG 38640 |||| ||||| ||| |||||| |||||||| | |||||||||| |||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCAGT GGTAAAAATG TCAGCAGGAA 38700 |||||||||| |||||||||| |||||||||| ||||||| | | | | || ||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 GGAGCCTTTC GTCTAGTATT GGACTATTGG CAAGGTTTAA CGTGTCAGCC GTTGTCATGA 38760 ||||||||| ||| |||||| |||||| ||| |||||||||| |||||||| |||||||| | GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGC GCTCTTCAGC AGAGCTGCTA 38820 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CACCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 38880 | |||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTTTTTGTC GTCATCCACG GGTGTAGGCC AAGCAGCAAG GATGTTAACA CCAGGACCGA 38940 ||| |||| ||||||||| | ||||||| ||||||| || ||| |||||| |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTCAAGATT CCAGGACTAG CTCTACTTGG TCCCCGAGAA GAAAATGCAG 39000 |||||||||| ||||||||| |||||| ||| | ||||||| ||| |||||| |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACTATTGG AGCATTTTCA TCTCCAATTG TTGTTCCTTG GAATGTGATT GTAGCAACAG 39060 |||||||||| |||||||| | ||||||||| ||||||||| || ||||||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGTTTAATAT TGAGTTTGTA TAGGCACGAA TT 39092 |||| |||| |||||||||| |||||||||| || GGTTCGATAT TGAGTTTGTA TAGGCACGAA TT 632 hqPGS_C08HBa0165B06.1+_SGN-E213088- (38461 39092) ******************************************************************************** EST sequence 414 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 37952 to 40263): Exon 1 38616 39024 ( 409 n); cDNA 1 409 ( 409 n); score: 0.851 MATCH C08HBa0165B06.1+ SGN-E317658- 0.851 409 1.000 C PGS_C08HBa0165B06.1+_SGN-E317658- (38616 39024) Alignment (genomic DNA sequence = upper lines): AATGGGGTAT CATAAACTAG TCCTGGATCA TTTGCCCTCG ATGGATTAAC ATGTCCTGCA 38675 ||||| |||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCAGTGGTAA AAATGTCAGC AGGAAGGAGC CTTTCGTCTA GTATTGGACT ATTGGCAAGG 38735 || | | || | | ||||| | || |||| |||||||| | |||||||||| | || ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAACGTGT CAGCCGTTGT CATGATTGCA GACTTAATAA CAGCAGGAGA CCAATCAGGA 38795 |||| |||| |||| ||||| ||| ||||| |||||||| | |||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGCGCTCT TCAGCAGAGC TGCTACACCA CTAAGGTGAG GGCAAGACAT TGAGGTGCCT 38855 |||||||| | |||||||||| ||| |||||| |||||||||| ||||| |||| |||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATAATAT TGAATGTGGA TTTGGTGTTT TTGTCGTCAT CCACGGGTGT AGGCCAAGCA 38915 |||| |||| ||||||| || ||| |||||| |||| || || |||||| || |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGATGT TAACACCAGG ACCGATTATG TCAGGTTTCA AGATTCCAGG ACTAGCTCTA 38975 ||||||| || |||||||||| |||||||||| |||||||| | |||| ||||| || ||| GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCCC GAGAAGAAAA TGCAGCAACT ATTGGAGCAT TTTCATCTC 39024 |||||||| | | | ||| || |||| || || ||||||| ||| |||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1+_SGN-E317658- (38616 39024) ******************************************************************************** EST sequence 277 -strand 504 n (File: SGN-E288988-) 1 TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 61 GCACCTACTG TATTTTTTTT TTTTTTTTTT TGTGCTATTG TGCAAAGCTG CATCTTCTGA 121 ATCATACATT TCATTCTGTA CTCATACAAA CTGTGACAAA GACTCATGCT TTCAGTAACA 181 CAATTTACAA ACAAAAAAAG ACAACAATGG CAGAAACACA GTTTAGAAAA TGTGCCTGCA 241 AATGTGTTCC CAAGTAGCTA CTAGCAATAA CCAAAACGAC AACAGAATGT TTGAAAAATC 301 GAAAGACCAT TATCAGCAAG TGGTGATGGG ATTATCTTCA GAGGATTCAG CAGCAGAAGC 361 AACTATCAAC TGAGGCTCAG GGATGACACC TTCTCTTCGT GCCTTTCTAC GTTCACGTTG 421 TAATCTGAAG GACTCTCTCT TTCGGTTTCT ATAGCTGTTG GGGTTTTCAG GTTGCACCTC 481 GCGTGGATAA ACACTTATCT TTTT Predicted gene structure (within gDNA segment 38768 to 44396): Exon 1 39405 39479 ( 75 n); cDNA 1 75 ( 75 n); score: 0.920 Intron 1 39480 42162 (2683 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0.70) Exon 2 42163 42209 ( 47 n); cDNA 76 119 ( 44 n); score: 0.702 Intron 2 42210 43249 (1040 n); Pd: 0.135 (s: 0.70), Pa: 0.000 (s: 0.58) Exon 3 43250 43303 ( 54 n); cDNA 120 172 ( 53 n); score: 0.611 MATCH C08HBa0165B06.1+ SGN-E288988- 0.791 176 0.349 C PGS_C08HBa0165B06.1+_SGN-E288988- (39405 39479,42163 42209,43250 43303) Alignment (genomic DNA sequence = upper lines): TCGAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 39464 || ||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 60 GCACCTACTG TAAGAATCCA AGGGGCTGCA TTTCCAACTG AGGCAAGCAA AGGGCCTCTA 39524 |||||||||| || GCACCTACTG TATTT..... .......... .......... .......... .......... 75 TTACCTGCAG AACAACTTAC AAAAACACCT CTTGCCGTTG CACTGTATGC CCCAAGAGCA 39584 .......... .......... .......... .......... .......... .......... 75 ATAGGGTCAT CATAGAAAGA GTTGGGAGAT CCACCAATGG ATATAGAAAG AATATCTACT 39644 .......... .......... .......... .......... .......... .......... 75 CCATCATCTA TAGCTGAATC CATGGCAGCT AAAATATCAC TGTCAGAACA ACCGCCATCA 39704 .......... .......... .......... .......... .......... .......... 75 GAACTACATA CCTTATATAC AGCTATGTGG GCAAGAGGGG CAACACCAAC TGCAGTTCCA 39764 .......... .......... .......... .......... .......... .......... 75 TTAGCATTGC CATATACATT AGCACCTTTC ACAAAAGCTC CCGCAGCTGT GCTTGCTGTG 39824 .......... .......... .......... .......... .......... .......... 75 TGTGTACCAT GCCCATTACC ATCTATCGGG GAACCATTGC CAAGATGGTA AGACCTCGCT 39884 .......... .......... .......... .......... .......... .......... 75 CCTATGAGCT TGTTGTTACA CTTGTTGATG AAGTTGGACT CACAAACTCC TTTCCATTTA 39944 .......... .......... .......... .......... .......... .......... 75 GCAGGCGGAG GAGGCATTCC AACATCACTA AACGAAGGAT GGTCAGGAAG AATTCCAGTG 40004 .......... .......... .......... .......... .......... .......... 75 TCTATAACTC CGATGATCAC GCCTTCTCCA TAGTTGGAAT CCTTCCATAC ACCCATGTTC 40064 .......... .......... .......... .......... .......... .......... 75 TGCTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTATCCA AGGACAAAAT CCTCTGTTTC 40124 .......... .......... .......... .......... .......... .......... 75 TGAGCGGAAA CAAAGCCTCG TTTCTTCTCC ATTTCCTTCA CATGAGATTC TGTTAATCTT 40184 .......... .......... .......... .......... .......... .......... 75 GCTGCAAATC CTTTCATCAC ATTGTGATAG GAATAGATCA TGGTAGCAGC CTCTTCATTT 40244 .......... .......... .......... .......... .......... .......... 75 CCACTCGAGC TAATTGCGGT AGTAGTTTTA GGCAAAAAAG AATGGTAATA GCTGTCTAGA 40304 .......... .......... .......... .......... .......... .......... 75 TCCGTTAACG ATGATTTAGT AGAAATCAGG CTTTCAGGGG ATTCAACATG GACTATATAA 40364 .......... .......... .......... .......... .......... .......... 75 ATCTCGAGAC CACTCTGAAT AGTCGGCCAT GGGAAAGAAC AAAAGATGAG AACAAGAAGG 40424 .......... .......... .......... .......... .......... .......... 75 ACTTTGAAGA ATCCCATGGC TGAAGCGATA ATGTATTTGA TGAATTTTTC TGCTTTGATG 40484 .......... .......... .......... .......... .......... .......... 75 CAACTGTCTA TTTATACTTC ATCTTTGCTC ATGACATTAT TTTATTCCAA GTGGAAAAAA 40544 .......... .......... .......... .......... .......... .......... 75 AGAATAATGT GGACAAGAAA ATTAAAATTA ATACTTAAAG GAAAAGAAAA GAAAGGCCAC 40604 .......... .......... .......... .......... .......... .......... 75 TAAGAGTGAA TGAAACTAAA GTTACATTGA ACTTTATTCT ATGAATTTGT AGATTTTCCA 40664 .......... .......... .......... .......... .......... .......... 75 AAAGACTTTC CACTGTAAAT TTGCTTAATT ATATGAACAT CTTTTTACCA TACAAATTTT 40724 .......... .......... .......... .......... .......... .......... 75 AACTGTTAAA TCACTTTGTA ATAAAAAGTT GCAAATATTA TGTCTAAATA AAGTTGCAAT 40784 .......... .......... .......... .......... .......... .......... 75 GCATGAACAT GTAACTATTC AAGATCCTTT TCCGAGAATT AATTTCAATA GTCATCAATT 40844 .......... .......... .......... .......... .......... .......... 75 ATTTTGAACG AATAATATAT TAATAGTCTT GAAATATTGA GAGGAGCTCA AATTTAAAAT 40904 .......... .......... .......... .......... .......... .......... 75 TCGAGGTGCT CATAGGAGAT TTCAGTTGGT CGAGATTAAA AATATTAATT ATAAAACTAA 40964 .......... .......... .......... .......... .......... .......... 75 AATTGGTTAA TTTTAAATAC TAAAATAAAA ATTGGTTAAT TTAATTTATT TGCAAGACAA 41024 .......... .......... .......... .......... .......... .......... 75 AACGTGAATG ATGGATGATG TACATTGCTC TCCTTCAATT GGACTTGCGT GGACATTTGA 41084 .......... .......... .......... .......... .......... .......... 75 CATATATAGT TGGTATAACG TGAAGGGTAG AGCTAGTAAC CTGCACGCAG ATTTGATCGA 41144 .......... .......... .......... .......... .......... .......... 75 ATTTAGTAGA TTTTGCTCGC ATACCTTAAA ATCTCATTAA ATTAATATAT GTGAGATCAT 41204 .......... .......... .......... .......... .......... .......... 75 AAAATATTGT TATTCTACAA AGGTATTATT TAATTCATAA ATTAATATTT ATTAATTAAA 41264 .......... .......... .......... .......... .......... .......... 75 GAGTGTTTTT GAGATTCAAT GAAGGTCAAC TTTGATTACA TTAAAATAAT TATATCTTAT 41324 .......... .......... .......... .......... .......... .......... 75 TAATTTATGT ATCATATTTA TTGAATTCAC ATAAGAAATA AATTTATTAT ATATAGTAAG 41384 .......... .......... .......... .......... .......... .......... 75 TACAGTGAAT ATATCAAAAT CATTATATCT TACTAAATTA TACATTATAT TTATTGAACT 41444 .......... .......... .......... .......... .......... .......... 75 TATATTTAAA AAAAAATCAT TATACACAAA GTACAATGTA TATGTATGAA TCACGGTAAT 41504 .......... .......... .......... .......... .......... .......... 75 ATATATATTT TTTTTTAATG ATTCATTATA AAATAAATTC AAAAATTCAG TGATTCATCG 41564 .......... .......... .......... .......... .......... .......... 75 TAAAAACAAA TTCACTATAT ATAATGGTCA TTGTTTCTTA ATAACAAAAT ATTATTCAAT 41624 .......... .......... .......... .......... .......... .......... 75 GTATCTTCAC AAGAAATATT CAATGTACGA TGATGAGAGA ATAAATTATA TAAGCAACAT 41684 .......... .......... .......... .......... .......... .......... 75 AGGAAATTTT TGTAACCATA TGCATAAATG GTTTCTCATT TAAAATGTGT CAACATAGGA 41744 .......... .......... .......... .......... .......... .......... 75 GGCGCACTCA GGAAGATAAT TTGTAGTCGT GACAACACTA GAATTTTTGG ATGCAATAAA 41804 .......... .......... .......... .......... .......... .......... 75 AAAATTAGAC ATGAATTTAA CTAGATTTAA ATTTGTAAGA AAGATAATAA AATCACATTT 41864 .......... .......... .......... .......... .......... .......... 75 CACTTAAATT ATCTTAGATA TATTCATATT TTTAAAGATA ATATTAGTGG GATAGTATAT 41924 .......... .......... .......... .......... .......... .......... 75 TTATATAGGG TCTTCTGAAA ATATATTGTC ATATTATCAT ATTGAAATGA GTGATTTTTT 41984 .......... .......... .......... .......... .......... .......... 75 TCATTGACAC AAATCAAGAC ATGAAAAAAC CTATTGTCTT GGATAAACTA TTAATATACC 42044 .......... .......... .......... .......... .......... .......... 75 GAATATTAAT TTAGTACTAT TATATTATAT TTGTGTTAGT AAGTCTATTT GGCCACAATA 42104 .......... .......... .......... .......... .......... .......... 75 TGTTAATAAA AAATATCCAT GTGAATTAAT TACAACGTCT TTTGCAGGAA ATTCGAAGTT 42164 || .......... .......... .......... .......... .......... ........TT 77 TTTTTTTTTT TTTGGTCATC ATATGAATAA GCTAAGCATC AACAAGTTAA TGTTATTCTT 42224 |||||||||| ||| || | | || | || ||| ||||| | TTTTTTTTTT TTTTGTGCTA TTGTGCA-AA GCT--GCATC TTCTG..... .......... 119 CGATCAATCC TCTTTAATTT GATTTTATAA TTTATCCTTT TGCTTAAAGA AAGTGTCACT 42284 .......... .......... .......... .......... .......... .......... 119 ATTTCATATT TTTAGAGAAT CAAATGAACA TCAACTCTTA AAGTGTTGAG TCCCTATATC 42344 .......... .......... .......... .......... .......... .......... 119 ATAATCAAAT CTTTTCTATA TATATATATA TATACAAAAG ATATACAATT CAATAAGAGC 42404 .......... .......... .......... .......... .......... .......... 119 TAGCGAACAA CAAAACTGTT TGGAATGATT AGAGAAGATT TGAGTTGGTT AAGAATTTAA 42464 .......... .......... .......... .......... .......... .......... 119 GATTCAAGAA AACACATTAT TGAGGAAGAT GAATTGATAC AATGTATAAA TACTATATAT 42524 .......... .......... .......... .......... .......... .......... 119 ACATAATTAT ACATTATTCA TACAAATATC GATATATTAC ATATACTACG ACCATTTTAG 42584 .......... .......... .......... .......... .......... .......... 119 TAAGAAAGTT TTTTTTGTCG GGTGTACATT TACATAAGAA GCCCCTCCTC CTCGTGAGTT 42644 .......... .......... .......... .......... .......... .......... 119 ATTTTGAGGC CGAGTATTAA GAATGAATTC TTCTTCATAT GGATTTGAAC AATCCTTACT 42704 .......... .......... .......... .......... .......... .......... 119 CTATTAACTA ATCGTAAGGA TTTAGGTAGG GCAAATTCAT TTCTTATTAT ATTAGTCATA 42764 .......... .......... .......... .......... .......... .......... 119 TTTGTCTTTA ATTCTTGATT CATTCCATTT CATTGGGGGT GCAGAAAGGG GCTAATTGAG 42824 .......... .......... .......... .......... .......... .......... 119 AATGAGAATC TTTTTTTTTA TATAAGGATT TGAACGAACC TTACTCTATT AACTAGTTGT 42884 .......... .......... .......... .......... .......... .......... 119 AAGGGTTTAC GTAACATTAC AACGTAACAG TTTTTCCAGG AAATTCATAG GATATGTCTC 42944 .......... .......... .......... .......... .......... .......... 119 TATTATTTTT CTTGTCTTAT TAATAAGTTT GAAGTCACCA AAGACTAAGA CTTTATTTTT 43004 .......... .......... .......... .......... .......... .......... 119 GAAGTCACTG TCAAGATTCT GGATCAAAGG GTGCTTAATT ATGAACTGAG ATTCTTTTAC 43064 .......... .......... .......... .......... .......... .......... 119 GGTCACTCAA CTAATATTTA TTATCTCGAG AAGTCATTTT ATTTGTTGAA AAAAATGAAA 43124 .......... .......... .......... .......... .......... .......... 119 TCAAGAAGAA AGGTTGAGCA GGGCATGGTC ACTAATATCA AAGAGGATAT GCTTTTGCAT 43184 .......... .......... .......... .......... .......... .......... 119 TCTTCAATCA GCTGAGAACG TAAAGTTTAT TGAAACAATA CATTTAATAA TATATATGAA 43244 .......... .......... .......... .......... .......... .......... 119 AAAAGTAACA TAAAGTTAAT TGTGTAAACA AACAGCATTT TCAAATGTCT GAATACTTT 43303 | || || | || || | |||| || ||| | | || | || || |||| .....AATCA TACATTTCAT TCTGTACTCA TACAAACTGT GACAAAGACT -CATGCTTT 172 hqPGS_C08HBa0165B06.1+_SGN-E288988- (39405 39479,42163 42209) ******************************************************************************** EST sequence 217 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 36310 to 43987): Exon 1 38441 39147 ( 707 n); cDNA 1 707 ( 707 n); score: 0.900 MATCH C08HBa0165B06.1+ SGN-E213673- 0.900 707 0.999 C PGS_C08HBa0165B06.1+_SGN-E213673- (38441 39147) Alignment (genomic DNA sequence = upper lines): AGTTCTGGTA TATGTTTGAG GAGTTGATCC AAGTCTGAAT ATGGAAAATG AAGGATAGTT 38500 ||||||||| ||||| |||| |||||||||| |||||| || ||| ||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAGGGATAC TTTTCACCTT CAAACAATTC ACCTGACGTT GTAACATTTT 38560 |||||||||| |||||||||| ||| |||| | | |||||| ||| ||| |||||| ||| TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTCT CGATTGGTAT AGTTTAAACC ACAAAAATAA GGTACATAGT CCTCAAATGG 38620 |||||||| | |||| || | |||| ||||| ||| |||||| |||||||| | |||||||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCAGT 38680 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 GGTAAAAATG TCAGCAGGAA GGAGCCTTTC GTCTAGTATT GGACTATTGG CAAGGTTTAA 38740 | | | || ||||||||| ||||||||| ||| |||||| |||||| ||| |||||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 CGTGTCAGCC GTTGTCATGA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGC 38800 |||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 GCTCTTCAGC AGAGCTGCTA CACCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT 38860 ||||||||| |||||||||| | |||||||| ||| |||||| ||||| |||| |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 AATATTGAAT GTGGATTTGG TGTTTTTGTC GTCATCCACG GGTGTAGGCC AAGCAGCAAG 38920 |||||||||| |||||||||| ||| |||| ||||||||| | ||||||| ||||||| || AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATGTTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATT CCAGGACTAG CTCTACTTGG 38980 ||| |||||| |||||||| | |||||||||| ||||||||| |||||| ||| | ||||||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCCCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTCA TCTCCAATTG TTGTTCCTTG 39040 ||| |||||| |||||||||| |||||||||| |||||||| | ||||||||| ||||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GAATGTGATT GTAGCAACAG GGTTTAATAT TGAGTTTGTA TAGGCACGAA TTCTTAATCC 39100 || ||||||| |||||||||| |||| |||| |||||||||| |||||||||| || | ||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 ATCTGCATCT GAAATATCCA ATGCTGGAAG AACATGAGCA TCAGCTG 39147 ||||||| || |||| | ||| |||||||||| |||||||||| ||||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTG 707 hqPGS_C08HBa0165B06.1+_SGN-E213673- (38441 39147) ******************************************************************************** EST sequence 196 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 36200 to 43891): Exon 1 38565 39268 ( 704 n); cDNA 1 704 ( 704 n); score: 0.905 MATCH C08HBa0165B06.1+ SGN-E212584- 0.905 704 1.000 C PGS_C08HBa0165B06.1+_SGN-E212584- (38565 39268) Alignment (genomic DNA sequence = upper lines): ACCTCTCGAT TGGTATAGTT TAAACCACAA AAATAAGGTA CATAGTCCTC AAATGGGGTA 38624 |||| | ||| | || ||||| |||||||| |||||||||| |||| ||||| |||||||||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCAGTGGTA 38684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| | | | TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 AAAATGTCAG CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TATTGGCAAG GTTTAACGTG 38744 | || |||| ||||| |||| ||||| ||| |||||||||| || ||||||| |||||| ||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCCGTTG TCATGATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGCGCTC 38804 ||||| |||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||| ||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCTACACC ACTAAGGTGA GGGCAAGACA TTGAGGTGCC TGATATAATA 38864 |||||||||| ||||||| || ||||||||| |||||||||| | |||||||| |||||||||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTT TTTGTCGTCA TCCACGGGTG TAGGCCAAGC AGCAAGGATG 38924 |||||||||| ||||||||| |||| |||| ||||| | | |||||||||| ||| ||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCGATTAT GTCAGGTTTC AAGATTCCAG GACTAGCTCT ACTTGGTCCC 38984 |||||||||| |||| ||||| |||||||||| ||||| |||| || ||| | | ||||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTCATCTC CAATTGTTGT TCCTTGGAAT 39044 |||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||| |||||||| | CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GTGATTGTAG CAACAGGGTT TAATATTGAG TTTGTATAGG CACGAATTCT TAATCCATCT 39104 |||||||||| |||||||||| |||||||| |||||||||| |||||||| | ||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCATCTGAAA TATCCAATGC TGGAAGAACA TGAGCATCAG CTGTTTTAGT GACACCATAT 39164 ||| |||||| | ||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TGTGATGTTT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAAC TTTTCCTTTA 39224 ||||||| | |||||||||| |||||||||| |||||||||| |||||||| | || ||||||| TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 GCAACACTGG AGACGCCACC GCCTGCTAGA CATAATACTA TCTT 39268 ||||| ||| || || || | ||||| | |||||||||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1+_SGN-E212584- (38565 39268) ******************************************************************************** EST sequence 244 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 37722 to 41863): Exon 1 38595 39184 ( 590 n); cDNA 3 592 ( 590 n); score: 0.847 MATCH C08HBa0165B06.1+ SGN-E329031- 0.847 590 0.997 C PGS_C08HBa0165B06.1+_SGN-E329031- (38595 39184) Alignment (genomic DNA sequence = upper lines): AAATAAGGTA CATAGTCCTC AAATGGGGTA TCATAAACTA GTCCTGGATC ATTTGCCCTC 38654 |||||||| | ||||| || ||||| ||| |||||||||| |||||||||| | | | ||| AAATAAGGAA TGTAGTCTTC GAATGGTGTA TCATAAACTA GTCCTGGATC ACTGNCTCTC 62 GATGGATTAA CATGTCCTGC ACCAGTGGTA AAAATGTCAG CAGGAAGGAG CCTTTCGTCT 38714 |||||||||| |||||||||| ||| | | | || | |||| ||| || ||| ||||||||| GATGGATTAA CATGTCCTGC ACCCATTGCA AAGAGATCAG CAGAAATGAG CCTTTCGTCC 122 AGTATTGGAC TATTGGCAAG GTTTAACGTG TCAGCCGTTG TCATGATTGC AGACTTAATA 38774 |||||||||| | ||||| || ||||| ||| ||||| |||| |||| ||||| ||||||||| AGTATTGGAC TGTTGGCGAG GTTTACTGTG TCAGCTGTTG TCATCATTGC TGACTTAATA 182 ACAGCAGGAG ACCAATCAGG ATGTGCGCTC TTCAGCAGAG CTGCTACACC ACTAAGGTGA 38834 | ||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| GCTGCAGGAG ACCAATCAGG ATGTGCGCTC TTCAGCAGAG CTGCAACACC ACTAAGGTGA 242 GGGCAAGACA TTGAGGTGCC TGATATAATA TTGAATGTGG ATTTGGTGTT TTTGTCGTCA 38894 |||||||||| ||||||| || |||| ||| |||||||| | |||| ||||| ||||| || | GGGCAAGACA TTGAGGTTCC GGATACTATA TTGAATGTTG ATTTTGTGTT TTTGTTGTTA 302 TCCACGGGTG TAGGCCAAGC AGCAAGGATG TTAACACCAG GACCGATTAT GTCAGGTTTC 38954 ||||||| | |||||||||| |||||||| | |||||||||| |||||||||| ||||||||| TCCACGGAGG TAGGCCAAGC AGCAAGGACG TTAACACCAG GACCGATTAT GTCAGGTTTT 362 AAGATTCCAG GACTAGCTCT ACTTGGTCCC CGAGAAGAAA ATGCAGCAAC TATTGGAGCA 39014 ||||| |||| |||| ||| |||||||| || || |||| ||| |||||| ||| |||||| AAGATGCCAG GACTTGCTAC GCTTGGTCCT CGTGAGGAAA ATGAAGCAAC TATAGGAGCA 422 TTTTCATCTC CAATTGTTGT TCCTTGGAAT GTGATTGTAG CAACAGGGTT TAATATTGAG 39074 |||| |||| ||||| || ||| ||||| ||||||| || |||| || || | | |||| TTTTTGTCTC CAATTACAGT TCCATGGAAG GTGATTGAAG CAACCGGATT TGAAGATGAG 482 TTTGTATAGG CACGAATTCT TAATCCATCT GCATCTGAAA TATCCAATGC TGGAAGAACA 39134 || |||||| || ||||| | |||||| |||| ||||| ||||||||| ||||| ||| TTCATATAGG CAAGAATTTT CTTTCCATCA GCATTTGAAA CATCCAATGC AGGAAGGACA 542 TGAGCATCAG CTGTTTTAGT GACACCATAT TGTGATGTTT TGATGACAAT 39184 ||||| |||| ||| |||||| ||||| | | | | | | |||||| ||| TGAGCTTCAG CTGATTTAGT CACACCCTCT TCTTGTTCAT TGATGAGAAT 592 hqPGS_C08HBa0165B06.1+_SGN-E329031- (38595 39184) ******************************************************************************** EST sequence 287 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 37421 to 43501): Exon 1 38684 39284 ( 601 n); cDNA 6 603 ( 598 n); score: 0.879 MATCH C08HBa0165B06.1+ SGN-E308535- 0.879 601 0.993 C PGS_C08HBa0165B06.1+_SGN-E308535- (38684 39284) Alignment (genomic DNA sequence = upper lines): AAAAATGTCA GCAGGAAGGA GCCTTTCGTC TAGTATTGGA CTATTGGCAA GGTTTAACGT 38743 ||| ||||| |||||||| | | |||| || |||||||||| ||| |||||| ||||||| || AAAGATGTCT GCAGGAAGTA ACTTTTCATC TAGTATTGGA CTACTGGCAA GGTTTAAAGT 65 GTCAGCCGTT GTCATGATTG CAGACTTAAT AACAGCAGGA GACCAATCAG GATGTGCGCT 38803 || ||| ||| |||||||||| |||||||||| | |||||||| |||||||||| |||||| ||| GTAAGCGGTT GTCATGATTG CAGACTTAAT AGCAGCAGGA GACCAATCAG GATGTGTGCT 125 CTTCAGCAGA GCTGCTACAC CACTAAGGTG AGGGCAAGAC ATTGAGGTGC CTGATATAAT 38863 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| CTTCAGCAGA GCTGCTACGC CACTAAGGTG AGGGCAAGAC ATCGAGGTGC CTGATATAAT 185 ATTGAATGTG GATTTGGTGT TTTTGTCGTC ATCCACGGGT GTAGGCCAAG CAGCAAGGAT 38923 |||||||||| |||||||| | |||||| ||| |||||||| |||||||||| |||||||||| ATTGAATGTG GATTTGGTTT TTTTGTTGTC ATCCACGGAG GTAGGCCAAG CAGCAAGGAT 245 GTTAACACCA GGACCGATTA TGTCAGGTTT CAAGATTCCA GGACTAGCTC TACTTGGTCC 38983 ||||||||| |||||||||| |||||||||| |||||| ||| ||||||| | || ||||||| ATTAACACCA GGACCGATTA TGTCAGGTTT CAAGATGCCA GGACTAGGTT TATTTGGTCC 305 CCGAGAAGAA AATGCAGCAA CTATTGGAGC ATTTTCATCT CCAATTGTTG TTCCTTGGAA 39043 ||||||||| |||| ||||| |||| ||||| ||||||||| |||||| ||| |||||||||| GCGAGAAGAA AATGAAGCAA CTATGGGAGC GTTTTCATCT CCAATTATTG TTCCTTGGAA 365 TGTGATTGTA GCAACAGGGT TTAATATTGA GTTTGTATAG GCACGAATTC TTAATCCATC 39103 ||||||| || || ||||| || ||||||| ||||||||| | | |||||| | | |||||| TGTGATTTTA GCTGTAGGGT TTGATATTGA GTTTGTATAA GTAAGAATTC TGATTCCATC 425 TGCATCTGAA ATATCCAATG CTGGAAGAAC ATGAGCATCA GCTGTTTTAG TGACACCATA 39163 |||| ||||| | ||||| | |||||||||| |||||||||| |||| ||| | ||||||||| TGCAGCTGAA ACCTCCAAAG CTGGAAGAAC ATGAGCATCA GCTGATTTTG TGACACCATC 485 TTGTGATGTT TTGATGACAA TCATGCCAAC ACCTCCAGCA TCCTTCACAA CTTTTCCTTT 39223 || || |||||| ||| |||| ||||| |||||||||| ||||||||| ||| |||||| TTCTGGCAGG TTGATGGCAA TCATACCAAC ACCTCCAGCA TCCTTCACAG CTTGTCCTTT 545 AGCAACACTG GAGACGCCAC CGCCTGCTAG ACATAATACT ATCTTTCCTC TTATAACAGG 39283 |||| | || ||| || | | | || ||||| ||| ||||||||| |||| |||| TACAACCTTA GAAACGACA- C-CTGGATA- ACATATGACT ATCTTTCCTT TTATTGCAGG 602 G 39284 | G 603 hqPGS_C08HBa0165B06.1+_SGN-E308535- (38684 39284) ******************************************************************************** EST sequence 363 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 36724 to 43843): Exon 1 38747 39409 ( 663 n); cDNA 1 663 ( 663 n); score: 0.894 MATCH C08HBa0165B06.1+ SGN-E397025- 0.894 663 1.000 C PGS_C08HBa0165B06.1+_SGN-E397025- (38747 39409) Alignment (genomic DNA sequence = upper lines): AGCCGTTGTC ATGATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGCGCTCTT 38806 |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| ||| || || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCTACACCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATAATATT 38866 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||| ||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTTTT TGTCGTCATC CACGGGTGTA GGCCAAGCAG CAAGGATGTT 38926 |||||||||| |||||||| | ||| |||||| ||||| ||| |||||||||| ||||||| || GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCGATTATGT CAGGTTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCCCG 38986 | |||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ||||||| | AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 AGAAGAAAAT GCAGCAACTA TTGGAGCATT TTCATCTCCA ATTGTTGTTC CTTGGAATGT 39046 || |||||| |||||||| | | |||||||| || |||||| ||| |||||| ||||||||| TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGTAGCA ACAGGGTTTA ATATTGAGTT TGTATAGGCA CGAATTCTTA ATCCATCTGC 39106 ||||||||| |||||| || || ||||||| | || ||| ||||| || ||| ||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 ATCTGAAATA TCCAATGCTG GAAGAACATG AGCATCAGCT GTTTTAGTGA CACCATATTG 39166 | |||||| | ||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TGATGTTTTG ATGACAATCA TGCCAACACC TCCAGCATCC TTCACAACTT TTCCTTTAGC 39226 ||||| ||| |||| ||||| |||||||||| |||||||||| |||||| ||| ||||||| | TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACACTGGAG ACGCCACCGC CTGCTAGACA TAATACTATC TTTCCTCTTA TAACAGGGCC 39286 |||| ||| || ||| |||| ||| |||||||||| |||||||||| || ||||| | AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 CTTGAGTGAC CCTGGTTTGC AATAAGGGGT TTCCGATGGA TCTTTTGCAT GTTTTGCAGC 39346 ||||||| ||| || ||| |||||||||| ||| |||||| |||||||||| ||||||||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCAAATAGA GTGAAGAATG TTGAGTTGGA AATCTGTGGA CGATAAGCAG ATTCTCCTTC 39406 |||||||||| |||||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 GAA 39409 || AAA 663 hqPGS_C08HBa0165B06.1+_SGN-E397025- (38747 39409) ******************************************************************************** EST sequence 168 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 37664 to 44539): Exon 1 38841 39460 ( 620 n); cDNA 1 617 ( 617 n); score: 0.853 MATCH C08HBa0165B06.1+ SGN-E306389- 0.853 620 1.005 C PGS_C08HBa0165B06.1+_SGN-E306389- (38841 39460) Alignment (genomic DNA sequence = upper lines): GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG TGTTTTTGTC GTCATCCACG 38900 ||||| |||| ||| |||||| |||||||||| |||||||||| | ||||||| |||||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GGTGTAGGCC AAGCAGCAAG GATGTTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATT 38960 | ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAGGACTAG CTCTACTTGG TCCCCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTCA 39020 |||||||||| | || |||| ||| |||||| ||||||| || ||||||| || ||| |||||| CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTG TTGTTCCTTG GAATGTGATT GTAGCAACAG GGTTTAATAT TGAGTTTGTA 39080 ||||||||| |||||||||| |||||||||| |||| || ||||| |||| |||||||||| TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAGGCACGAA TTCTTAATCC ATCTGCATCT GAAATATCCA ATGCTGGAAG AACATGAGCA 39140 || | | ||| |||| | ||| ||||||| || |||| |||| | |||||||| |||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGTTT TAGTGACACC ATATTGTGAT GTTTTGATGA CAATCATGCC AACACCTCCA 39200 ||||||| || | |||||||| || || || |||||| ||||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTCA CAACTTTTCC TTTAGCAACA CTGGAGACGC CACCGCCTGC TAGACATAAT 39260 |||||||||| || ||| ||| ||| |||| | || ||| || | | | || ||||| GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CA-C-CTGGA TA-ACATATG 417 ACTATCTTTC CTCTTATAAC AGGGCCCTTG AGTGACCCTG GTTTGCAATA AGGGGTTTCC 39320 |||||||||| || |||| | |||| | || |||||||||| ||||||| || |||||||| ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 GATGGATCTT TTGCATGTTT TGCAGCATCA AATAGAGTGA AGAATGTTGA GTTGGAAATC 39380 |||||||| | | ||| || ||||||| | ||||||| ||||| |||| || ||||||| GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TGTGGACGAT AAGCAGATTC TCCTTCGAAT TCCTCTCCAT TTCCAAGCTT AACAGTAGCT 39440 |||||||||| ||| || ||| ||||| ||| |||||| || ||||||| | ||||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTATCTTTC TATCAAGCGT 39460 |||||||||| ||||| || TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1+_SGN-E306389- (38841 39460) ******************************************************************************** EST sequence 223 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 38154 to 40278): Exon 1 38908 39678 ( 771 n); cDNA 1 771 ( 771 n); score: 0.798 MATCH C08HBa0165B06.1+ SGN-E540271- 0.798 771 1.000 C PGS_C08HBa0165B06.1+_SGN-E540271- (38908 39678) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGATGTTA ACACCAGGAC CGATTATGTC AGGTTTCAAG ATTCCAGGAC 38967 |||||||||| ||||| |||| |||||||||| |||||||||| |||||| ||| || ||||||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGCTCTACT TGGTCCCCGA GAAGAAAATG CAGCAACTAT TGGAGCATTT TCATCTCCAA 39027 | ||| || |||||| || || ||||||| ||||||||| ||||||||| | ||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTGTTGTTCC TTGGAATGTG ATTGTAGCAA CAGGGTTTAA TATTGAGTTT GTATAGGCAC 39087 || ||||| ||||| ||| |||| ||||| | || ||| | |||||| |||||||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GAATTCTTAA TCCATCTGCA TCTGAAATAT CCAATGCTGG AAGAACATGA GCATCAGCTG 39147 ||||| | |||||| ||| | ||||| || ||||||| || ||| |||||| || ||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 TTTTAGTGAC ACCATATTGT GATGTTTTGA TGACAATCAT GCCAACACCT CCAGCATCCT 39207 |||||| || ||| | || | | |||| ||| |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TCACAACTTT TCCTTTAGCA ACACTGGAGA CGCCACCGCC TGC-TAGACA TAATACTATC 39266 | || || ||||| |||| || || |||| | | | | | | ||| || |||||| TTACGGATTG TCCTTGAGCA ACTCT-GAGA AGACTTATAC TTCGCAAACA CAAGACTATC 359 TTTCCTCTTA TAACAGGGCC CTTGAGTGAC CCTGGTTTGC AATAAGGGGT TTCCGATGGA 39326 || ||| | | || ||||| | || ||||| ||||| | | || |||| | || || TTACCTTTGA TAGCAGGGTC ATTAAGTGAG CCTGGACTAC AAAAAGGCGC GCTAAATTGA 419 TCTTTTGCAT GTTTTGCAGC ATCAAATAGA GTGAAGAATG TTGAGTTGGA AATCTGTGGA 39386 || || ||| ||| |||| |||| ||||| | |||||||| |||||||||| | ||| |||| TCACTTTCAT TCTTTCCAGC ATCATATAGA GGGAAGAATG TTGAGTTGGA AGTCTTTGGA 479 CGATAAGCAG ATTCTCCTTC GAATTCCTCT CCATTTCCAA GCTTAACAGT AGCTTTTATC 39446 ||||||||| |||||||||| |||||||| | |||||||| |||||||||| | | || | TGATAAGCAG ATTCTCCTTC AAATTCCTCG CTATTTCCAA GCTTAACAGT AACCTTCAGT 539 TTTCTATCAA GCGTGCTGGC ACCTACTGTA AGAATCCAAG GGGCTGCATT TCCAACTGAG 39506 ||||||||| | || ||||| ||| || || |||||||| | ||||| |||| | || | | TTTCTATCAT GAGTACTGGC ACCAACAGTG AGAATCCACG GGGCTTCATT AGCTACAGTG 599 GCAAGCAAAG GGCCTCTATT ACCTGCAGAA CAACTTACAA AAACACCTCT TGCCGTTGCA 39566 ||||| | | | || ||||| ||||| || |||||||| ||| |||||| | | |||||| CCAAGCGACG GACCGCTATT GCCTGCTGAG GCACTTACAA AAATACCTCT TTCTGTTGCA 659 CTGTATGCCC CAAGAGCAAT AGGGTCATCA TAGAAAGAGT TGGGAGATCC ACCAATGGAT 39626 ||||| | || | |||||||| | |||||| | ||||| | | | | ||| ||||| ||| CTGTACGTCC CGAGAGCAAT ACCATCATCA TGGAAAGGTT TTGTACTTCC ACCAAGGGAG 719 ATAGAAAGAA TATCTACTCC ATCATCTATA GCTGAATCCA TGGCAGCTAA AA 39678 || ||||||| ||||||| || |||||||||| |||| ||||| |||||||||| || ATTGAAAGAA TATCTACACC ATCATCTATA GCTGCATCCA TGGCAGCTAA AA 771 hqPGS_C08HBa0165B06.1+_SGN-E540271- (38908 39678) ******************************************************************************** EST sequence 269 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 37625 to 40402): Exon 1 38910 39271 ( 362 n); cDNA 1 362 ( 362 n); score: 0.903 MATCH C08HBa0165B06.1+ SGN-E200689- 0.903 362 1.000 C PGS_C08HBa0165B06.1+_SGN-E200689- (38910 39271) Alignment (genomic DNA sequence = upper lines): CAAGCAGCAA GGATGTTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT TCCAGGACTA 38969 |||||||| | |||| ||||| ||||||||| |||||||||| |||||||||| |||||| || CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GCTCTACTTG GTCCCCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTC ATCTCCAATT 39029 | | |||||| |||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 GTTGTTCCTT GGAATGTGAT TGTAGCAACA GGGTTTAATA TTGAGTTTGT ATAGGCACGA 39089 |||||||| ||| |||||| |||||||||| ||||| ||| |||||||||| |||||||||| ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTCTTAATC CATCTGCATC TGAAATATCC AATGCTGGAA GAACATGAGC ATCAGCTGTT 39149 ||| | || |||||||| | ||||| | || |||||||||| |||||||||| |||||||| | ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTGACAC CATATTGTGA TGTTTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 39209 |||||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 300 ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG CTAGACATAA TACTATCTTT 39269 ||| ||| || ||||| |||| | ||| || || ||| || ||| |||||| |||||||||| ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 360 CC 39271 || CC 362 hqPGS_C08HBa0165B06.1+_SGN-E200689- (38910 39271) ******************************************************************************** EST sequence 153 -strand 490 n (File: SGN-E282432-) 1 GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 61 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 121 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 181 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 241 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 301 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 361 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 421 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 481 ATCCTTCAAA Predicted gene structure (within gDNA segment 36528 to 41782): Exon 1 38920 39409 ( 490 n); cDNA 1 490 ( 490 n); score: 0.869 MATCH C08HBa0165B06.1+ SGN-E282432- 0.869 490 1.000 C PGS_C08HBa0165B06.1+_SGN-E282432- (38920 39409) Alignment (genomic DNA sequence = upper lines): GGATGTTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT TCCAGGACTA GCTCTACTTG 38979 |||| ||| | |||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 60 GTCCCCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTC ATCTCCAATT GTTGTTCCTT 39039 |||| | || ||||||||| ||||| || | ||||||||| ||||||||| ||||||||| GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 120 GGAATGTGAT TGTAGCAACA GGGTTTAATA TTGAGTTTGT ATAGGCACGA ATTCTTAATC 39099 |||||| || |||||||||| ||| || || ||||||| | || ||| || ||| || || GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 180 CATCTGCATC TGAAATATCC AATGCTGGAA GAACATGAGC ATCAGCTGTT TTAGTGACAC 39159 | |||||| | ||||| | || |||||||||| |||||||||| |||||||| | |||||||||| CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 240 CATATTGTGA TGTTTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC ACAACTTTTC 39219 |||||||||| || |||||| | |||||||| |||||||||| |||||||||| ||| ||| || CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 300 CTTTAGCAAC ACTGGAGACG CCACCGCCTG CTAGACATAA TACTATCTTT CCTCTTATAA 39279 ||||| |||| | ||| || ||| || || |||||| |||||||||| ||||||||| CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 360 CAGGGCCCTT GAGTGACCCT GGTTTGCAAT AAGGGGTTTC CGATGGATCT TTTGCATGTT 39339 ||||| | | |||||| ||| || |||||| |||||||||| ||||||||| ||||||| || CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 420 TTGCAGCATC AAATAGAGTG AAGAATGTTG AGTTGGAAAT CTGTGGACGA TAAGCAGATT 39399 |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| |||||| | TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 480 CTCCTTCGAA 39409 |||||| || ATCCTTCAAA 490 hqPGS_C08HBa0165B06.1+_SGN-E282432- (38920 39409) ******************************************************************************** EST sequence 374 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 37905 to 40094): Exon 1 38940 39431 ( 492 n); cDNA 3 494 ( 492 n); score: 0.913 MATCH C08HBa0165B06.1+ SGN-E210009- 0.913 492 0.996 C PGS_C08HBa0165B06.1+_SGN-E210009- (38940 39431) Alignment (genomic DNA sequence = upper lines): ATTATGTCAG GTTTCAAGAT TCCAGGACTA GCTCTACTTG GTCCCCGAGA AGAAAATGCA 38999 |||||||||| |||||||||| |||||| || | | |||||| |||| ||||| |||||||||| ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG GTCCGCGAGA AGAAAATGCA 62 GCAACTATTG GAGCATTTTC ATCTCCAATT GTTGTTCCTT GGAATGTGAT TGTAGCAACA 39059 |||||||||| ||||||||| |||||||||| |||||||| ||| |||||| |||||||||| GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT GGATTGTGAT TGTAGCAACA 122 GGGTTTAATA TTGAGTTTGT ATAGGCACGA ATTCTTAATC CATCTGCATC TGAAATATCC 39119 ||||| ||| |||||||||| |||||||||| ||| | || |||||||| | ||||| | || GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC CATCTGCAGC TGAAACAACC 182 AATGCTGGAA GAACATGAGC ATCAGCTGTT TTAGTGACAC CATATTGTGA TGTTTTGATG 39179 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| || |||||| AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 242 ACAATCATGC CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG 39239 |||||||||| |||||||||| |||||||||| ||| ||| || ||||| |||| | ||| || ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA 302 CCACCGCCTG CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT 39299 || ||| || ||| |||||| |||||||||| ||||||||| ||||| | | |||||||||| CCGCCGAATG CTAAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT 362 GGTTTGCAAT AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG 39359 || |||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CGTCTGCAAT AAGGGGTTTC AGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 422 AAGAATGTTG AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA 39419 |||||||||| |||||||||| || ||||||| |||||||||| ||||||| || |||||||||| AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 482 TTTCCAAGCT TA 39431 ||||| |||| || TTTCCGAGCT TA 494 hqPGS_C08HBa0165B06.1+_SGN-E210009- (38940 39431) ******************************************************************************** EST sequence 236 -strand 504 n (File: SGN-E301429-) 1 CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 61 GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 121 GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 181 TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 241 ACAACCTTAG AAACGACACC TGGATAACAT ATGACTATCT TTCCTTTTAT TGCAGGGTCA 301 GTGAGTGACC CTGGTTTGCA GTAAGGGGTT TTAGATGGAT CACCTTTACC TTTTGAAGCA 361 TCATACAGAG TGAAGAATTT TGAGTCGGAA ATCTGTGGAC GATAAGAAGC TTCCCCTTCA 421 AATTCCTCTG TATTTCCAAG TGTAACAGTA ACTTTTATCT TTCTATCAGT AGTGCTGGCG 481 CCTACCGTAA GAATCCAAGG GGCG Predicted gene structure (within gDNA segment 37961 to 40100): Exon 1 38985 39490 ( 506 n); cDNA 1 503 ( 503 n); score: 0.840 MATCH C08HBa0165B06.1+ SGN-E301429- 0.840 506 1.004 C PGS_C08HBa0165B06.1+_SGN-E301429- (38985 39490) Alignment (genomic DNA sequence = upper lines): CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTCATCTC CAATTGTTGT TCCTTGGAAT 39044 |||||||||| ||| |||||| ||| ||||| |||||||||| ||||| |||| |||||||||| CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 60 GTGATTGTAG CAACAGGGTT TAATATTGAG TTTGTATAGG CACGAATTCT TAATCCATCT 39104 |||||| ||| | |||||| | |||||||| |||||||| | | ||||||| | ||||||| GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 120 GCATCTGAAA TATCCAATGC TGGAAGAACA TGAGCATCAG CTGTTTTAGT GACACCATAT 39164 ||| |||||| ||||| || |||||||||| |||||||||| ||| ||| || |||||||| | GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 180 TGTGATGTTT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAAC TTTTCCTTTA 39224 | || | ||||| |||| ||| |||||| |||||||||| |||||||| | || |||||| TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 240 GCAACACTGG AGACGCCACC GCCTGCTAGA CATAATACTA TCTTTCCTCT TATAACAGGG 39284 |||| | | | ||| || | | | || | |||| |||| |||||||| | ||| ||||| ACAACCTTAG AAACGACA-C -CTGGATA-A CATATGACTA TCTTTCCTTT TATTGCAGGG 297 CCCTTGAGTG ACCCTGGTTT GCAATAAGGG GTTTCCGATG GATCTTTTGC ATGTTTTGCA 39344 | |||||| |||||||||| ||| |||||| |||| |||| |||| | | ||||| | TCAGTGAGTG ACCCTGGTTT GCAGTAAGGG GTTTTAGATG GATCACCTTT ACCTTTTGAA 357 GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTGTG GACGATAAGC AGATTCTCCT 39404 |||||| | | |||||||||| | |||||| | |||||||||| ||||||||| || ||| ||| GCATCATACA GAGTGAAGAA TTTTGAGTCG GAAATCTGTG GACGATAAGA AGCTTCCCCT 417 TCGAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 39464 || ||||||| || |||||| ||| ||||| ||| |||||| |||||||||| | |||||| TCAAATTCCT CTGTATTTCC AAGTGTAACA GTAACTTTTA TCTTTCTATC AGTAGTGCTG 477 GCACCTACTG TAAGAATCCA AGGGGC 39490 || ||||| | |||||||||| |||||| GCGCCTACCG TAAGAATCCA AGGGGC 503 hqPGS_C08HBa0165B06.1+_SGN-E301429- (38985 39490) ******************************************************************************** EST sequence 203 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 37568 to 44472): Exon 1 39024 39678 ( 655 n); cDNA 1 655 ( 655 n); score: 0.863 MATCH C08HBa0165B06.1+ SGN-E335107- 0.863 655 1.000 C PGS_C08HBa0165B06.1+_SGN-E335107- (39024 39678) Alignment (genomic DNA sequence = upper lines): CCAATTGTTG TTCCTTGGAA TGTGATTGTA GCAACAGGGT TTAATATTGA GTTTGTATAG 39083 |||||| ||| |||||||||| || |||||| ||||||||| || || |||| ||| | || CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCACGAATTC TTAATCCATC TGCATCTGAA ATATCCAATG CTGGAAGAAC ATGAGCATCA 39143 ||| ||||| || ||| || |||| ||||| | | |||||| |||||||||| |||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGTTTTAG TGACACCATA TTGTGATGTT TTGATGACAA TCATGCCAAC ACCTCCAGCA 39203 |||| ||||| |||||||||| |||||||| ||||||| || |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 180 TCCTTCACAA CTTTTCCTTT AGCAACACTG GAGACGCCAC CGCCTGCTAG ACATAATACT 39263 ||||||||| ||| |||||| | ||||| || | || | || |||| |||||||||| TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 240 ATCTTTCCTC TTATAACAGG GCCCTTGAGT GACCCTGGTT TGCAATAAGG GGTTTCCGAT 39323 |||||||||| ||||| |||| | | ||||| || ||| || |||||||||| |||||| ||| ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 300 GGATCTTTTG CATGTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGAGTT GGAAATCTGT 39383 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| ||| |||||||| | GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 360 GGACGATAAG CAGATTCTCC TTCGAATTCC TCTCCATTTC CAAGCTTAAC AGTAGCTTTT 39443 |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| |||||||||| GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 420 ATCTTTCTAT CAAGCGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGC ATTTCCAACT 39503 |||||||| | |||||||||| ||||||||| |||||||||| ||||||| | ||| | || ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 480 GAGGCAAGCA AAGGGCCTCT ATTACCTGCA GAACAACTTA CAAAAACACC TCTTGCCGTT 39563 | | || | || || || ||| || ||| |||||||||| ||| || || |||| ||||| GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 540 GCACTGTATG CCCCAAGAGC AATAGGGTCA TCATAGAAAG AGTTGGGAGA TCCACCAATG 39623 |||||||| | |||| | ||| |||| ||| || ||||| | | ||| ||||| || | GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 600 GATATAGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 39678 || || |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 655 hqPGS_C08HBa0165B06.1+_SGN-E335107- (39024 39678) ******************************************************************************** EST sequence 390 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 37660 to 43592): Exon 1 39038 39587 ( 550 n); cDNA 1 553 ( 553 n); score: 0.881 MATCH C08HBa0165B06.1+ SGN-E208913- 0.881 550 0.989 C PGS_C08HBa0165B06.1+_SGN-E208913- (39038 39587) Alignment (genomic DNA sequence = upper lines): TTGGAATGTG ATTGTAGCAA CAGGGTTTAA TATTGAGTTT GTATAGGCAC GAATTCTTAA 39097 ||||| |||| |||||||||| ||||||| | |||||||||| |||||||||| ||||| | TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCATCTGCA TCTGAAATAT CC---AATGC TGGAAGAACA TGAGCATCAG CTGTTTTAGT 39154 |||||||||| |||||| | || ||||| |||||||||| |||||||||| ||| |||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 GACACCATAT TGTGATGTTT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAAC 39214 |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| |||||||| | GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 180 TTTTCCTTTA GCAACACTGG AGACGCCACC GCCTGCTAGA CATAATACTA TCTTTCCTCT 39274 || ||||||| ||||| ||| || || || | ||||| | |||||||||| |||||||||| TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 240 TATAACAGGG CCCTTGAGTG ACCCTGGTTT GCAATAAGGG GTTTCCGATG GATCTTTTGC 39334 |||| ||||| | |||||| ||||| || | |||||||||| ||||| |||| |||||||||| TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 300 ATGTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTGTG GACGATAAGC 39394 || ||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 360 AGATTCTCCT TCGAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC 39454 |||||||||| || ||||||| |||||||||| |||||| || |||||||||| |||||||||| AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 420 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGCA TTTCCAACTG AGGCAAGCAA 39514 |||||||||| |||||||||| |||||||||| |||||||| || | |||| ||||| || | AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 480 AGGGCCTCTA TTACCTGCAG AACAACTTAC AAAAACACCT CTTGCCGTTG CACTGTATGC 39574 ||| || || || ||||| | | ||||| || || || ||| ||| |||| ||||||| || AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 540 CCCAAGAGCA ATA 39587 ||| |||||| ||| CCCGAGAGCA ATA 553 hqPGS_C08HBa0165B06.1+_SGN-E208913- (39038 39587) ******************************************************************************** EST sequence 251 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 36159 to 42437): Exon 1 39100 39677 ( 578 n); cDNA 1 578 ( 578 n); score: 0.781 MATCH C08HBa0165B06.1+ SGN-E286017- 0.781 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E286017- (39100 39677) Alignment (genomic DNA sequence = upper lines): CATCTGCATC TGAAATATCC AATGCTGGAA GAACATGAGC ATCAGCTGTT TTAGTGACAC 39159 |||| |||| ||||| |||| ||||| |||| | |||||||| |||| || | ||||| |||| CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 60 CATATTGTGA TGTTTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC ACAACTTTTC 39219 | | || | | |||||| | |||||||| |||||||||| ||||||||| || || || CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 120 CTTTAGCAAC ACTGGAGACG CCACCGCCTG C-TAGACATA ATACTATCTT TCCTCTTATA 39278 ||| |||||| || |||| | | || | | ||| | | |||||||| ||| | ||| CTTGAGCAAC TCT-GAGAAG ACTTATACTT CGCAAACACA AGACTATCTT ACCTTTGATA 179 ACAGGGCCCT TGAGTGACCC TGGTTTGCAA TAAGGGGTTT CCGATGGATC TTTTGCATGT 39338 ||||| | | | ||||| || ||| | ||| |||| | || |||| || ||| GCAGGGTCAT TAAGTGAGCC TGGACTACAA AAAGGCGCGC TAAATTGATC ACTTTCATTC 239 TTTGCAGCAT CAAATAGAGT GAAGAATGTT GAGTTGGAAA TCTGTGGACG ATAAGCAGAT 39398 ||| |||||| || |||||| |||||||||| ||||||||| ||| |||| | |||||||||| TTTCCAGCAT CATATAGAGG GAAGAATGTT GAGTTGGAAG TCTTTGGATG ATAAGCAGAT 299 TCTCCTTCGA ATTCCTCTCC ATTTCCAAGC TTAACAGTAG CTTTTATCTT TCTATCAAGC 39458 |||||||| | ||||||| | |||||||||| ||||||||| | || | || ||||||| | TCTCCTTCAA ATTCCTCGCT ATTTCCAAGC TTAACAGTAA CCTTCAGTTT TCTATCATGA 359 GTGCTGGCAC CTACTGTAAG AATCCAAGGG GCTGCATTTC CAACTGAGGC AAGCAAAGGG 39518 || ||||||| | || || || |||||| ||| ||| |||| | || | | | |||| | || GTACTGGCAC CAACAGTGAG AATCCACGGG GCTTCATTAG CTACAGTGCC AAGCGACGGA 419 CCTCTATTAC CTGCAGAACA ACTTACAAAA ACACCTCTTG CCGTTGCACT GTATGCCCCA 39578 || ||||| | ||| || |||||||||| | ||||||| | |||||||| ||| | ||| CCGCTATTGC CTGATGAGGC ACTTACAAAA ATACCTCTTT CTGTTGCACT GTACGTCCCG 479 AGAGCAATAG GGTCATCATA GAAAGAGTTG GGAGATCCAC CAATGGATAT AGAAAGAATA 39638 ||||||||| ||||||| ||||| || | | ||||| ||| ||| || ||||||||| AGAGCAATAC CATCATCATG GAAAGGTTTT GTACTTCCAC CAAGGGAGAT TGAAAGAATA 539 TCTACTCCAT CATCTATAGC TGAATCCATG GCAGCTAAA 39677 ||||| |||| |||||||||| || || ||| ||||||||| TCTACACCAT CATCTATAGC TGCATAAATG GCAGCTAAA 578 hqPGS_C08HBa0165B06.1+_SGN-E286017- (39100 39677) ******************************************************************************** EST sequence 300 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 38502 to 40289): Exon 1 39112 39689 ( 578 n); cDNA 1 578 ( 578 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E244401- 1.000 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E244401- (39112 39689) Alignment (genomic DNA sequence = upper lines): AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 39171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 60 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 39231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 120 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 39291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 180 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 39351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 240 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 39411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 300 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 39471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 360 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 39531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 420 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 39591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 480 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 39651 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 540 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 39689 |||||||||| |||||||||| |||||||||| |||||||| CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 578 hqPGS_C08HBa0165B06.1+_SGN-E244401- (39112 39689) ******************************************************************************** EST sequence 309 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 38520 to 40289): Exon 1 39130 39689 ( 560 n); cDNA 1 560 ( 560 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E244422- 0.998 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E244422- (39130 39689) Alignment (genomic DNA sequence = upper lines): GAACATGAGC ATCAGCTGTT TTAGTGACAC CATATTGTGA TGTTTTGATG ACAATCATGC 39189 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 60 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 39249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 120 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 39309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 180 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 39369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 240 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 39429 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 300 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 39489 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 360 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 39549 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 420 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 39609 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 480 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 39669 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 540 CAGCTAAAAT ATCACTGTCA 39689 |||||||||| |||||||||| CAGCTAAAAT ATCACTGTCA 560 hqPGS_C08HBa0165B06.1+_SGN-E244422- (39130 39689) ******************************************************************************** EST sequence 397 -strand 435 n (File: SGN-E208810-) 1 CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 61 GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 121 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 181 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 241 GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 301 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 361 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 421 CCGAGAGCAA TACTT Predicted gene structure (within gDNA segment 37214 to 41072): Exon 1 39159 39587 ( 429 n); cDNA 1 432 ( 432 n); score: 0.859 MATCH C08HBa0165B06.1+ SGN-E208810- 0.859 429 0.986 C PGS_C08HBa0165B06.1+_SGN-E208810- (39159 39587) Alignment (genomic DNA sequence = upper lines): CCATATTGTG ATGTTTTGAT GACAATCATG -CCAACACCT CCAGCATCCT TCACA-ACTT 39216 |||||||||| ||| ||||| |||||||||| ||||||||| ||||||||| | ||| || CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 60 TTCCTTTAGC AACACTGGAG ACGCCACCGC CT-GCTAGAC ATAATACTAT CTTTCCTCTT 39275 ||||||| | |||| ||| || || ||| | |||| || |||||||||| ||||||| || GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 120 ATAACAGGGC CCTTGAGTGA CCCTGGTTTG CAATAAGGGG TTTCCGATGG ATCTTTTGCA 39335 ||| ||||| | ||||||| |||| || || |||||||||| |||| ||||| |||||||||| ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 180 TGTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTGTGG ACGATAAGCA 39395 | |||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 240 GATTCTCCTT CGAATTCCTC TCCATTTCCA AGCTTAACAG TAGCTTTTAT CTTTCTATCA 39455 |||| ||||| | |||||||| ||||||||| |||||| ||| |||||||||| |||||||||| GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 300 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGCAT TTCCAACTGA GGCAAGCAAA 39515 |||||||||| |||||||||| |||||||||| ||||||| | | | | ||| |||| || || AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 360 GGGCCTCTAT TACCTGCAGA ACAACTTACA AAAACACCTC TTGCCGTTGC ACTGTATGCC 39575 || || ||| | ||||| || ||||| ||| | || |||| || ||||| |||||| ||| GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 420 CCAAGAGCAA TA 39587 || ||||||| || CCGAGAGCAA TA 432 hqPGS_C08HBa0165B06.1+_SGN-E208810- (39159 39587) ******************************************************************************** EST sequence 258 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 38678 to 43142): Exon 1 39333 39800 ( 468 n); cDNA 1 465 ( 465 n); score: 0.893 MATCH C08HBa0165B06.1+ SGN-E202140- 0.893 468 1.006 C PGS_C08HBa0165B06.1+_SGN-E202140- (39333 39800) Alignment (genomic DNA sequence = upper lines): GCATGTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTG TGGACGATAA 39392 |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTCGAATTC CTCTCCATTT CCAAGCTTAA CAGTAGCTTT TATCTTTCTA 39452 |||||||||| |||| ||||| |||||||||| || |||||| |||||||||| |||||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG CATTTCCAAC TGAGGCAAGC 39512 |||||||||| |||||||||| |||||||||| |||||||||| || | || ||||||| || TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 AAAGGGCCTC TATTACCTGC AGAACAACTT ACAAAAACAC CTCTTGCCGT TGCACTGTAT 39572 |||| || |||| ||||| || ||||| |||| || | ||||| || ||||||||| GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCAAGAG CAATAGGGTC ATCATAGAAA GAGTTGGGAG ATCCACCAAT GGATATAGAA 39632 ||||| |||| ||||| || |||||| | | | | ||| |||||||||| |||||||||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 300 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 39692 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 360 CAACCGCCAT CAGAACTACA TACCTTATAT ACAGCTATGT GGGCAAGAGG GGCAACACCA 39752 ||| ||| |||| |||| ||||||||| | ||||| | |||||||||| ||||||||| CAA---CCAA CAGAGTTACA CACCTTATAT ATGGCTATAT GGGCAAGAGG AGCAACACCA 417 ACTGCAGTTC CATTAGCATT GCCATATACA TTAGCACCTT TCACAAAA 39800 |||||||||| |||||||||| |||||||| |||||||||| |||||||| ACTGCAGTTC CATTAGCATT TTCATATACA TTAGCACCTT TCACAAAA 465 hqPGS_C08HBa0165B06.1+_SGN-E202140- (39333 39800) ******************************************************************************** EST sequence 186 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 38972 to 42346): Exon 1 39654 40432 ( 779 n); cDNA 1 779 ( 779 n); score: 0.899 MATCH C08HBa0165B06.1+ SGN-E539488- 0.899 779 1.000 C PGS_C08HBa0165B06.1+_SGN-E539488- (39654 40432) Alignment (genomic DNA sequence = upper lines): ATAGCTGAAT CCATGGCAGC TAAAATATCA CTGTCAGAAC AACCGCCATC AGAACTACAT 39713 ||||||| || |||||||||| ||||||||| |||||||||| | |||||||| |||||||||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA CAGCTATGTG GGCAAGAGGG GCAACACCAA CTGCAGTTCC ATTAGCATTG 39773 |||||||||| | |||||||| ||| |||||| |||||||||| | ||||| || ||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCATATACAT TAGCACCTTT CACAAAAGCT CCCGCAGCTG TGCTTGCTGT GTGTGTACCA 39833 ||| ||| || |||||||||| |||||| ||| || ||||||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGCCCATTAC CATCTATCGG GGAACCATTG CCAAGATGGT AAGACCTCGC TCCTATGAGC 39893 || |||||| |||||||||| |||||||||| ||||| || | ||||||| || ||| |||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGTTGAT GAAGTTGGAC TCACAAACTC CTTTCCATTT AGCAGGCGGA 39953 |||||||||| |||| || | ||| |||||| |||||||||| ||||||| || ||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATTC CAACATCACT AAACGAAGGA TGGTCAGGAA GAATTCCAGT GTCTATAACT 40013 |||||||| | |||||||||| ||| |||||| || ||||||| |||||||||| ||||| |||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CGCCTTCTCC ATAGTTGGAA TCCTTCCATA CACCCATGTT CTGCTGCAAA 40073 |||||||||| | ||| |||| | | |||||| || ||||| | |||||||| ||| |||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTATCC AAGGACAAAA TCCTCTGTTT CTGAGCGGAA 40133 |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| |||||| || CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCTC GTTTCTTCTC CATTTCCTTC ACATGAGATT CTGTTAATCT TGCTGCAAAT 40193 |||||||| |||| ||||| |||||||||| || || | | | |||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTTTCATCA CATTGTGATA GGAATAGATC ATGGTAGCAG CCTCTTCATT TCCACTCGAG 40253 |||||||||| ||||||| || ||| |||||| ||| |||||| ||||||||| |||||||||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAATGGTAAT AGCTGTCTAG ATCCGTTAAC 40313 |||||||||| |||||||||| |||||||||| ||| |||||| |||| |||| ||||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTTAG TAGAAATCAG GCTTTCAGGG GATTCAACAT GGACTATATA AATCTCGAGA 40373 ||||||| || ||||||| | | ||||||| |||||||||| |||||||||| | |||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 CCACTCTGAA TAGTCGGCCA TGGGAAAGAA CAAAAGATGA GAACAAGAAG GACTTTGAA 40432 ||||||||| || | |||| | ||||||| ||||| |||| | |||||| | ||| || TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1+_SGN-E539488- (39654 40432) ******************************************************************************** EST sequence 328 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 38076 to 44139): Exon 1 39919 40469 ( 551 n); cDNA 1 552 ( 552 n); score: 0.885 MATCH C08HBa0165B06.1+ SGN-E207645- 0.885 551 0.998 C PGS_C08HBa0165B06.1+_SGN-E207645- (39919 40469) Alignment (genomic DNA sequence = upper lines): TGGACTCACA AACTCCTTTC CATTTAGCAG GCGGAGGAGG CATTCCAACA TCACTAAACG 39978 ||| |||||| |||||||||| || ||||||| |||| ||||| ||| |||||| || ||||| | TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGGTC AGGAAGAATT CCAGTGTCTA TAACTCCGAT GATCACGCCT TCTCCATAGT 40038 ||||||| || |||||||||| |||||||||| ||||||||| |||||||||| |||||| | | AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCCTT CCATACACCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 40098 ||||||| || ||| | ||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TATCCAAGGA CAAAATCCTC TGTTTCTGAG CGGAAACAAA GCCTCGTTTC TTCTCCATTT 40158 | | ||| || |||||||||| |||||||||| | || ||||| ||| |||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACATG AGATTCTGTT AATCTTGCTG CAAATCCTTT CATCACATTG TGATAGGAAT 40218 ||||||| || | | ||| |||||||||| |||| ||| | |||||||||| ||||| |||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATGGT AGCAGCCTCT TCATTTCCAC TCGAGCTAAT TGCGGTAGTA GTTTTAGGCA 40278 ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAATG GTAATAGCTG TCTAGATCCG TTAACGATGA TTTAGTAGAA ATCAGGCTTT 40338 |||||||| | ||||||||| |||| |||| |||||||||| || || || | || ||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CAGGGGATTC AACATGGACT ATATAAATCT CGAGACCACT CTGAATAGTC GGCCATGGGA 40398 |||||||||| ||||||||| |||||| ||| ||||| ||| ||||||||| |||||||||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAACAAAA GATGAGAACA AGAAGGACTT TGAAGAATCC CATGGCTGAA GCGATAATGT 40458 | |||||||| ||||| |||| | ||||| || | |||||||| |||||||| | |||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 540 AT-TTGATGA AT 40469 | ||||| || GTGCTGATGT AT 552 hqPGS_C08HBa0165B06.1+_SGN-E207645- (39919 40469) ******************************************************************************** EST sequence 406 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 38868 to 44039): Exon 1 39928 40444 ( 517 n); cDNA 1 517 ( 517 n); score: 0.905 Intron 1 40445 41093 ( 649 n); Pd: 0.000 (s: 0.84), Pa: 0.883 (s: 0) Exon 2 41094 41109 ( 16 n); cDNA 518 533 ( 16 n); score: 0.562 MATCH C08HBa0165B06.1+ SGN-E330205- 0.905 533 1.000 C PGS_C08HBa0165B06.1+_SGN-E330205- (39928 40444,41094 41109) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCATTTAGCA GGCGGAGGAG GCATTCCAAC ATCACTAAAC GAAGGATGGT 39987 |||||||||| ||| |||||| ||||| |||| |||| ||||| ||| ||||| |||||||||| AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAAGAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTCTCCATAG TTGGAATCCT 40047 |||||| ||| |||||||||| |||||||||| |||||||||| || |||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTATCCAAGG 40107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || | ||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAATCCT CTGTTTCTGA GCGGAAACAA AGCCTCGTTT CTTCTCCATT TCCTTCACAT 40167 |||||||||| |||||||||| || || |||| |||| |||| ||||||||| |||||||| | ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GAGATTCTGT TAATCTTGCT GCAAATCCTT TCATCACATT GTGATAGGAA TAGATCATGG 40227 | | | || |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTCCA CTCGAGCTAA TTGCGGTAGT AGTTTTAGGC AAAAAAGAAT 40287 |||||||||| |||||||||| ||||| |||| ||| ||||| |||||||||| ||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT GTCTAGATCC GTTAACGATG ATTTAGTAGA AATCAGGCTT TCAGGGGATT 40347 |||||||||| ||| |||| |||||| ||| ||| ||||| || |||||| |||||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC TATATAAATC TCGAGACCAC TCTGAATAGT CGGCCATGGG AAAGAACAAA 40407 |||||||||| |||||| || |||||| || |||||||||| |||||| || |||||||| | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAGAAC AAGAAGGACT TTGAAGAATC CCATGGCTGA AGCGATAATG TATTTGATGA 40467 |||||| ||| |||| || | || || |||| ||||||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGC... .......... .......... 517 ATTTTTCTGC TTTGATGCAA CTGTCTATTT ATACTTCATC TTTGCTCATG ACATTATTTT 40527 .......... .......... .......... .......... .......... .......... 517 ATTCCAAGTG GAAAAAAAGA ATAATGTGGA CAAGAAAATT AAAATTAATA CTTAAAGGAA 40587 .......... .......... .......... .......... .......... .......... 517 AAGAAAAGAA AGGCCACTAA GAGTGAATGA AACTAAAGTT ACATTGAACT TTATTCTATG 40647 .......... .......... .......... .......... .......... .......... 517 AATTTGTAGA TTTTCCAAAA GACTTTCCAC TGTAAATTTG CTTAATTATA TGAACATCTT 40707 .......... .......... .......... .......... .......... .......... 517 TTTACCATAC AAATTTTAAC TGTTAAATCA CTTTGTAATA AAAAGTTGCA AATATTATGT 40767 .......... .......... .......... .......... .......... .......... 517 CTAAATAAAG TTGCAATGCA TGAACATGTA ACTATTCAAG ATCCTTTTCC GAGAATTAAT 40827 .......... .......... .......... .......... .......... .......... 517 TTCAATAGTC ATCAATTATT TTGAACGAAT AATATATTAA TAGTCTTGAA ATATTGAGAG 40887 .......... .......... .......... .......... .......... .......... 517 GAGCTCAAAT TTAAAATTCG AGGTGCTCAT AGGAGATTTC AGTTGGTCGA GATTAAAAAT 40947 .......... .......... .......... .......... .......... .......... 517 ATTAATTATA AAACTAAAAT TGGTTAATTT TAAATACTAA AATAAAAATT GGTTAATTTA 41007 .......... .......... .......... .......... .......... .......... 517 ATTTATTTGC AAGACAAAAC GTGAATGATG GATGATGTAC ATTGCTCTCC TTCAATTGGA 41067 .......... .......... .......... .......... .......... .......... 517 CTTGCGTGGA CATTTGACAT ATATAGTTGG TATAACGTGA AG 41109 | | || || | || .......... .......... ......TAGC TAATACAACA AG 533 hqPGS_C08HBa0165B06.1+_SGN-E330205- (39928 40444) ******************************************************************************** EST sequence 347 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 39305 to 43989): Exon 1 39987 40454 ( 468 n); cDNA 1 467 ( 467 n); score: 0.900 MATCH C08HBa0165B06.1+ SGN-E207387- 0.900 468 0.998 C PGS_C08HBa0165B06.1+_SGN-E207387- (39987 40454) Alignment (genomic DNA sequence = upper lines): TCAGGAAGAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTCTCCATA GTTGGAATCC 40046 ||||||| || |||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTATCCAAG 40106 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| | ||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAATCC TCTGTTTCTG AGCGGAAACA AAGCCTCGTT TCTTCTCCAT TTCCTTCACA 40166 |||||||||| |||||||||| ||| || ||| ||||| ||| | |||||||| ||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGAGATTCTG TTAATCTTGC TGCAAATCCT TTCATCACAT TGTGATAGGA ATAGATCATG 40226 || | | | |||||||||| |||||| ||| ||||||||| |||||||||| |||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 GTAGCAGCCT CTTCATTTCC ACTCGAGCTA ATTGCGGTAG TAGTTTTAGG CAAAAAAGAA 40286 |||||||||| |||||||||| |||||| ||| |||| ||||| ||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 TGGTAATAGC TGTCTAGATC CGTTAACGAT GATTTAGTAG AAATCAGGCT TTCAGGGGAT 40346 ||||||||| | ||| ||| ||||||| || |||| ||||| || ||||| |||||||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CTATATAAAT CTCGAGACCA CTCTGAATAG TCGGCCATGG GAAAGAACAA 40406 |||||||||| | |||||| | ||||||| | |||||||||| | |||||| | ||||||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAGAA CAAGAAGGAC TTTGAAGAAT CCCATGGCTG AAGCGATA 40454 ||||||| || ||||||||| ||| || ||| ||||||||| | ||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCT- AGCTAATA 467 hqPGS_C08HBa0165B06.1+_SGN-E207387- (39987 40454) ******************************************************************************** EST sequence 146 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 38708 to 42336): Exon 1 39993 40429 ( 437 n); cDNA 1 437 ( 437 n); score: 0.888 MATCH C08HBa0165B06.1+ SGN-E282403- 0.888 437 0.995 C PGS_C08HBa0165B06.1+_SGN-E282403- (39993 40429) Alignment (genomic DNA sequence = upper lines): AGAATTCCAG TGTCTATAAC TCCGATGATC ACGCCTTCTC CATAGTTGGA ATCCTTCCAT 40052 |||||||||| |||||| ||| |||||||||| || ||| ||| || | ||||| ||| ||||| AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 60 ACACCCATGT TCTGCTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATC CAAGGACAAA 40112 | ||||||| |||| ||||| |||||||||| |||||||||| ||||||||| |||||| ||| AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 120 ATCCTCTGTT TCTGAGCGGA AACAAAGCCT CGTTTCTTCT CCATTTCCTT CACATGAGAT 40172 |||||||||| ||||||| || |||||||| |||| |||| |||||||||| ||| || | | ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 180 TCTGTTAATC TTGCTGCAAA TCCTTTCATC ACATTGTGAT AGGAATAGAT CATGGTAGCA 40232 | ||||||| |||||||||| ||||||||| |||||||| | |||| ||||| |||| ||||| GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 240 GCCTCTTCAT TTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAATGGTAA 40292 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 300 TAGCTGTCTA GATCCGTTAA CGATGATTTA GTAGAAATCA GGCTTTCAGG GGATTCAACA 40352 ||||| |||| ||||||||| ||||||| | |||||||| || ||||||| ||||||||| TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 360 TGGACTATAT AAATCTCGAG ACCACTCTGA ATAGTCGGCC ATGGGAAAGA ACAAAAGATG 40412 |||||||||| || ||||||| | |||||||| ||| | |||| | ||||||| ||||| ||| TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 420 AGAACAAGAA GGACTTT 40429 | | ||||| | | ||| AAGATAAGAA GAATTTT 437 hqPGS_C08HBa0165B06.1+_SGN-E282403- (39993 40429) ******************************************************************************** EST sequence 41 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 41351 to 46561): Exon 1 42155 42178 ( 24 n); cDNA 102 125 ( 24 n); score: 0.667 Intron 1 42179 43307 (1129 n); Pd: 0.000 (s: 0), Pa: 0.873 (s: 0.76) Exon 2 43308 43709 ( 402 n); cDNA 126 523 ( 398 n); score: 0.816 Intron 2 43710 43974 ( 265 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.92) Exon 3 43975 44250 ( 276 n); cDNA 524 799 ( 276 n); score: 0.841 PPA cDNA 31 13 MATCH C08HBa0165B06.1+ SGN-E548357+ 0.826 702 0.879 C PGS_C08HBa0165B06.1+_SGN-E548357+ (42155 42178,43308 43709,43975 44250) Alignment (genomic DNA sequence = upper lines): ATTCGAAGTT TTTTTTTTTT TTTGGTCATC ATATGAATAA GCTAAGCATC AACAAGTTAA 42214 ||| ||| |||| |||| || ATTGAAAGCA TTTTAGTTTT ATTC...... .......... .......... .......... 125 TGTTATTCTT CGATCAATCC TCTTTAATTT GATTTTATAA TTTATCCTTT TGCTTAAAGA 42274 .......... .......... .......... .......... .......... .......... 125 AAGTGTCACT ATTTCATATT TTTAGAGAAT CAAATGAACA TCAACTCTTA AAGTGTTGAG 42334 .......... .......... .......... .......... .......... .......... 125 TCCCTATATC ATAATCAAAT CTTTTCTATA TATATATATA TATACAAAAG ATATACAATT 42394 .......... .......... .......... .......... .......... .......... 125 CAATAAGAGC TAGCGAACAA CAAAACTGTT TGGAATGATT AGAGAAGATT TGAGTTGGTT 42454 .......... .......... .......... .......... .......... .......... 125 AAGAATTTAA GATTCAAGAA AACACATTAT TGAGGAAGAT GAATTGATAC AATGTATAAA 42514 .......... .......... .......... .......... .......... .......... 125 TACTATATAT ACATAATTAT ACATTATTCA TACAAATATC GATATATTAC ATATACTACG 42574 .......... .......... .......... .......... .......... .......... 125 ACCATTTTAG TAAGAAAGTT TTTTTTGTCG GGTGTACATT TACATAAGAA GCCCCTCCTC 42634 .......... .......... .......... .......... .......... .......... 125 CTCGTGAGTT ATTTTGAGGC CGAGTATTAA GAATGAATTC TTCTTCATAT GGATTTGAAC 42694 .......... .......... .......... .......... .......... .......... 125 AATCCTTACT CTATTAACTA ATCGTAAGGA TTTAGGTAGG GCAAATTCAT TTCTTATTAT 42754 .......... .......... .......... .......... .......... .......... 125 ATTAGTCATA TTTGTCTTTA ATTCTTGATT CATTCCATTT CATTGGGGGT GCAGAAAGGG 42814 .......... .......... .......... .......... .......... .......... 125 GCTAATTGAG AATGAGAATC TTTTTTTTTA TATAAGGATT TGAACGAACC TTACTCTATT 42874 .......... .......... .......... .......... .......... .......... 125 AACTAGTTGT AAGGGTTTAC GTAACATTAC AACGTAACAG TTTTTCCAGG AAATTCATAG 42934 .......... .......... .......... .......... .......... .......... 125 GATATGTCTC TATTATTTTT CTTGTCTTAT TAATAAGTTT GAAGTCACCA AAGACTAAGA 42994 .......... .......... .......... .......... .......... .......... 125 CTTTATTTTT GAAGTCACTG TCAAGATTCT GGATCAAAGG GTGCTTAATT ATGAACTGAG 43054 .......... .......... .......... .......... .......... .......... 125 ATTCTTTTAC GGTCACTCAA CTAATATTTA TTATCTCGAG AAGTCATTTT ATTTGTTGAA 43114 .......... .......... .......... .......... .......... .......... 125 AAAAATGAAA TCAAGAAGAA AGGTTGAGCA GGGCATGGTC ACTAATATCA AAGAGGATAT 43174 .......... .......... .......... .......... .......... .......... 125 GCTTTTGCAT TCTTCAATCA GCTGAGAACG TAAAGTTTAT TGAAACAATA CATTTAATAA 43234 .......... .......... .......... .......... .......... .......... 125 TATATATGAA AAAAGTAACA TAAAGTTAAT TGTGTAAACA AACAGCATTT TCAAATGTCT 43294 .......... .......... .......... .......... .......... .......... 125 GAATACTTTG TAGCCAATGC AAACTCAACT GCAATTGGAC TTCTCACAGA GTACTTGTTA 43354 | | | || |||| |||||||||| |||| ||||| || | | ||| .......... ...AGCAGAC ACTCT-AACT GCAATTGGAC TTCTTACAGA GTGCCTATTA 171 GAATTCCACT TCAAGAATCC CTCAAAGACC CCAGACTTTG AGCTGTTGGT TCTCTTGGAA 43414 |||||||||| |||| ||||| ||||| | | | ||| || | || || | |||||| | GAATTCCACT TCAAAAATCC CTCAACATCA CTGGTAGTTG AGATATTAGT TGTCTTGGTA 231 AATGTCACTT GGTATGTTAA CTTCTGCTTC AACTCCGAGA AAATTAGCTT GCGGGGCTTA 43474 ||| |||||| | ||||| || |||||| ||| ||| |||| || ||||| | ||| | | AATATCACTT GATATGTCAA CTTCTGGTTC AACGTTGAGA AATTTAGCGC GGAGGGTTCA 291 ACTTTCACGA CAACGCCTTT AGGTGAAGCT ATCTGCACCG TGTAAGATGA TTTGGCATCA 43534 |||||||||| |||| ||||| |||||| || |||| ||| |||||||||| ||| |||||| ACTTTCACGA CAACTCCTTT TGGTGAAACT ATCTCCACTT TGTAAGATGA TTTAGCATCA 351 CCAACATTGG TCACAGTTCT TGTGAATGTC TGAGGAGTTG ATCCAAGTCT CGATATGCAA 43594 |||||||||| | || ||||| || ||||| |||||||||| |||||||||| | ||| || CCAACATTGG TTACGGTTCT GGTATATGTC TGAGGAGTTG ATCCAAGTCT -G--ATGGAA 408 AATGAAGGAT AGTTTAATTG TGCTTCAGGG ATACTTTCAA CCTCCGAGCA ATTTACTTTG 43654 |||||||||| | |||| ||| |||||||| |||| || | |||||||||| ||| || ||| AATGAAGGAT AATTTAGTTG CCCTTCAGGG ATACGTTTTA CCTCCGAGCA ATTCACCTTG 468 CGTTTCAACA ATTTACCTAC CTGTGAATTT GTGTAGTTCA AACCACACAA ATAAGGTAGA 43714 |||| |||| ||||||||| || |||| |||||||||| ||||||| || ||||| CGTTGTAACA CTTTACCTAC CTCCCGATTT GTGTAGTTCA AACCACATAA ATAAG..... 523 TAGTCCTCAA ATGGGGTATC ATAAACTAGT CCTGGGTCAT TTGCCCTTGA TGGATTAACA 43774 .......... .......... .......... .......... .......... .......... 523 TGTCCTGCAC CAATTGCATA GATATCAGCA GGACTGAGCC TTTCGTCGAG TATTGGACTA 43834 .......... .......... .......... .......... .......... .......... 523 CTGGCAAGGT TTAATGTGTC AGCGGTTGTC ATGATTGCAG ACTTAATAAC AGCAGGAGAC 43894 .......... .......... .......... .......... .......... .......... 523 CAATCAGGAT GTGAGCTCTT CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT 43954 .......... .......... .......... .......... .......... .......... 523 GAGGTGCCTG ATATAATATT GAATGTGGAT TTGGTGTTTT TGTTGCCATC CACGGAGGTA 44014 |||||| ||| || ||||||| ||||| ||| |||||||||| .......... .......... GAATGTTGAT TTTGTGTTTT TGTTGTTATC CACGGAGGTA 563 GGCCAAGCAG CAAGGATATT AACACCAGGA CCGATTATGT CAGGTTTCAA GATTCCACGA 44074 |||||||||| |||||| || |||||||||| |||||||||| ||||||| || ||| ||| || GGCCAAGCAG CAAGGACGTT AACACCAGGA CCGATTATGT CAGGTTTTAA GATGCCAGGA 623 CTAGCTGTAT TTGGTCCCCG AGAAGAAAAT GCAGCAACTA TTGGAGCATT TTTATCTCCA 44134 || ||| ||||||| || || |||||| | |||||||| | |||||||| ||| |||||| CTTGCTACGC TTGGTCCTCG TGAGGAAAAT GAAGCAACTA TAGGAGCATT TTTGTCTCCA 683 ATTATTGTTC CTTGGAATGT GATTGTAGCA ACAGGGTTTA ATATTGAGTT TGTATAGGCG 44194 |||| |||| | ||||| || ||||| |||| || || ||| | |||||| ||||||| ATTACAGTTC CATGGAAGGT GATTGAAGCA ACCGGATTTG AAGATGAGTT CATATAGGCA 743 CGAATTTTTG TTCCATCTGC AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATC 44250 ||||||| ||||||| || | ||||||| ||||||| | |||| ||||| ||| || AGAATTTTCT TTCCATCAGC ATTTGAAACA TCCAATGCAG GAAGGACATG AGCTTC 799 hqPGS_C08HBa0165B06.1+_SGN-E548357+ (43308 43709,43975 44250) ******************************************************************************** EST sequence 134 +strand 450 n (File: SGN-E237320+) 1 TTTTTTTTTT TTTTTTTGAC ATAAAACATA TACTGGAAAA AAAAAACAGC AATCCAATAT 61 GATTAATTGT GAATAATTTC TGCACTTATT TTTACATTTT AGATTGAAAG CATTTTAGTT 121 TTATTCAGCA GACACTCTAA CTGCAATTGG ACTTCTTACA GAGTGCCTAT TAGAATTCCA 181 CTTCAAAAAT CCCTCAACAT CACTGGTAGT TGAGATATTA GTTGTCTTGG TAAATATCAC 241 TTGATATGTC AACTTCTGGT TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC 301 GACAACTCCT TTTGGTGAAA CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT 361 GGTTACGGTT CTGGTATATG TCTGAGGAGT TGATCCAAGT CTGATGGAAA ATGAAGGATA 421 ATTTAGTTGC CCTTAGGGAT ACGTTTTACC Predicted gene structure (within gDNA segment 41341 to 44674): Exon 1 42155 42178 ( 24 n); cDNA 103 126 ( 24 n); score: 0.667 Intron 1 42179 43307 (1129 n); Pd: 0.000 (s: 0), Pa: 0.873 (s: 0.76) Exon 2 43308 43636 ( 329 n); cDNA 127 450 ( 324 n); score: 0.802 PPA cDNA 17 1 MATCH C08HBa0165B06.1+ SGN-E237320+ 0.802 353 0.784 C PGS_C08HBa0165B06.1+_SGN-E237320+ (42155 42178,43308 43636) Alignment (genomic DNA sequence = upper lines): ATTCGAAGTT TTTTTTTTTT TTTGGTCATC ATATGAATAA GCTAAGCATC AACAAGTTAA 42214 ||| ||| |||| |||| || ATTGAAAGCA TTTTAGTTTT ATTC...... .......... .......... .......... 126 TGTTATTCTT CGATCAATCC TCTTTAATTT GATTTTATAA TTTATCCTTT TGCTTAAAGA 42274 .......... .......... .......... .......... .......... .......... 126 AAGTGTCACT ATTTCATATT TTTAGAGAAT CAAATGAACA TCAACTCTTA AAGTGTTGAG 42334 .......... .......... .......... .......... .......... .......... 126 TCCCTATATC ATAATCAAAT CTTTTCTATA TATATATATA TATACAAAAG ATATACAATT 42394 .......... .......... .......... .......... .......... .......... 126 CAATAAGAGC TAGCGAACAA CAAAACTGTT TGGAATGATT AGAGAAGATT TGAGTTGGTT 42454 .......... .......... .......... .......... .......... .......... 126 AAGAATTTAA GATTCAAGAA AACACATTAT TGAGGAAGAT GAATTGATAC AATGTATAAA 42514 .......... .......... .......... .......... .......... .......... 126 TACTATATAT ACATAATTAT ACATTATTCA TACAAATATC GATATATTAC ATATACTACG 42574 .......... .......... .......... .......... .......... .......... 126 ACCATTTTAG TAAGAAAGTT TTTTTTGTCG GGTGTACATT TACATAAGAA GCCCCTCCTC 42634 .......... .......... .......... .......... .......... .......... 126 CTCGTGAGTT ATTTTGAGGC CGAGTATTAA GAATGAATTC TTCTTCATAT GGATTTGAAC 42694 .......... .......... .......... .......... .......... .......... 126 AATCCTTACT CTATTAACTA ATCGTAAGGA TTTAGGTAGG GCAAATTCAT TTCTTATTAT 42754 .......... .......... .......... .......... .......... .......... 126 ATTAGTCATA TTTGTCTTTA ATTCTTGATT CATTCCATTT CATTGGGGGT GCAGAAAGGG 42814 .......... .......... .......... .......... .......... .......... 126 GCTAATTGAG AATGAGAATC TTTTTTTTTA TATAAGGATT TGAACGAACC TTACTCTATT 42874 .......... .......... .......... .......... .......... .......... 126 AACTAGTTGT AAGGGTTTAC GTAACATTAC AACGTAACAG TTTTTCCAGG AAATTCATAG 42934 .......... .......... .......... .......... .......... .......... 126 GATATGTCTC TATTATTTTT CTTGTCTTAT TAATAAGTTT GAAGTCACCA AAGACTAAGA 42994 .......... .......... .......... .......... .......... .......... 126 CTTTATTTTT GAAGTCACTG TCAAGATTCT GGATCAAAGG GTGCTTAATT ATGAACTGAG 43054 .......... .......... .......... .......... .......... .......... 126 ATTCTTTTAC GGTCACTCAA CTAATATTTA TTATCTCGAG AAGTCATTTT ATTTGTTGAA 43114 .......... .......... .......... .......... .......... .......... 126 AAAAATGAAA TCAAGAAGAA AGGTTGAGCA GGGCATGGTC ACTAATATCA AAGAGGATAT 43174 .......... .......... .......... .......... .......... .......... 126 GCTTTTGCAT TCTTCAATCA GCTGAGAACG TAAAGTTTAT TGAAACAATA CATTTAATAA 43234 .......... .......... .......... .......... .......... .......... 126 TATATATGAA AAAAGTAACA TAAAGTTAAT TGTGTAAACA AACAGCATTT TCAAATGTCT 43294 .......... .......... .......... .......... .......... .......... 126 GAATACTTTG TAGCCAATGC AAACTCAACT GCAATTGGAC TTCTCACAGA GTACTTGTTA 43354 | | | || |||| |||||||||| |||| ||||| || | | ||| .......... ...AGCAGAC ACTCT-AACT GCAATTGGAC TTCTTACAGA GTGCCTATTA 172 GAATTCCACT TCAAGAATCC CTCAAAGACC CCAGACTTTG AGCTGTTGGT TCTCTTGGAA 43414 |||||||||| |||| ||||| ||||| | | | ||| || | || || | |||||| | GAATTCCACT TCAAAAATCC CTCAACATCA CTGGTAGTTG AGATATTAGT TGTCTTGGTA 232 AATGTCACTT GGTATGTTAA CTTCTGCTTC AACTCCGAGA AAATTAGCTT GCGGGGCTTA 43474 ||| |||||| | ||||| || |||||| ||| ||| |||| || ||||| | ||| | | AATATCACTT GATATGTCAA CTTCTGGTTC AACGTTGAGA AATTTAGCGC GGAGGGTTCA 292 ACTTTCACGA CAACGCCTTT AGGTGAAGCT ATCTGCACCG TGTAAGATGA TTTGGCATCA 43534 |||||||||| |||| ||||| |||||| || |||| ||| |||||||||| ||| |||||| ACTTTCACGA CAACTCCTTT TGGTGAAACT ATCTCCACTT TGTAAGATGA TTTAGCATCA 352 CCAACATTGG TCACAGTTCT TGTGAATGTC TGAGGAGTTG ATCCAAGTCT CGATATGCAA 43594 |||||||||| | || ||||| || ||||| |||||||||| |||||||||| | ||| || CCAACATTGG TTACGGTTCT GGTATATGTC TGAGGAGTTG ATCCAAGTCT -G--ATGGAA 409 AATGAAGGAT AGTTTAATTG TGCTTCAGGG ATACTTTCAA CC 43636 |||||||||| | |||| ||| ||| |||| |||| || | || AATGAAGGAT AATTTAGTTG CCCTT-AGGG ATACGTTTTA CC 450 hqPGS_C08HBa0165B06.1+_SGN-E237320+ (43308 43636) ******************************************************************************** EST sequence 318 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 42100 to 45073): Exon 1 43316 43699 ( 384 n); cDNA 58 441 ( 384 n); score: 0.835 PPA cDNA 11 1 MATCH C08HBa0165B06.1+ SGN-E307529- 0.835 384 0.871 C PGS_C08HBa0165B06.1+_SGN-E307529- (43316 43699) Alignment (genomic DNA sequence = upper lines): AACTCAACTG CAATTGGACT TCTCACAGAG TACTTGTTAG AATTCCACTT CAAGAATCCC 43375 || |||||| |||||||||| |||||||||| | | | ||| || ||||||| |||||||||| AATACAACTG CAATTGGACT TCTCACAGAG TGCCTAGTAG AAGTCCACTT CAAGAATCCC 117 TCAAAGACCC CAGACTT-TG AGCTGTTGGT TCTCTTGGAA AATGTCACTT GGTATGTTAA 43434 |||| ||| || |||| || | ||| |||| | |||||||| |||||||||| |||||||||| TCAACAACCA CA-ACTTCTG AACTGCTGGT TGTCTTGGAA AATGTCACTT GGTATGTTAA 176 CTTCTGCTTC AACTCCGAGA AAATTAGCTT GCGGGGCTTA ACTTTCACGA CAACGCCTTT 43494 |||||| ||| |||| |||| || |||| | ||| | |||| | | |||| ||| | CTTCTGGTTC AACTTGGAGA AATTTAGTTC TGTGGGTACA ACTTCTATGG CAACTCCTAT 236 AGGTGAAGCT ATCTGCACCG TGTAAGATGA TTTGGCATCA CCAACATTGG TCACAGTTCT 43554 |||||||||| |||| ||| |||||||||| | ||||| ||||| |||| |||||||||| AGGTGAAGCT ATCTCCACTT TGTAAGATGA TGCAACATCA CCAACGTTGG TCACAGTTCT 296 TGTGAATGTC TGAGGAGTTG ATCCAAGTCT CGATATGCAA AATGAAGGAT AGTTTAATTG 43614 |||| ||||| |||||||||| ||||||||| ||||| || || ||||||| ||||||||| TGTGTATGTC TGAGGAGTTG ATCCAAGTCC AAATATGGAA AACGAAGGAT AGTTTAATTC 356 TGCTTCAGGG ATACTTTCAA CCTCCGAGCA ATTTACTTTG CGTTTCAACA ATTTACCTAC 43674 |||||||||| ||||| | | | || |||| |||||| ||| |||| |||| ||||| ||| TGCTTCAGGG ATACTCTTTA CTTCTAAGCA ATTTACCTTG CGTTGTAACA GTTTACTTAC 416 CTGTGAATTT GTGTAGTTCA AACCA 43699 ||||| |||| ||||| ||| ||||| CTGTGCATTT GTGTACCTCA AACCA 441 hqPGS_C08HBa0165B06.1+_SGN-E307529- (43316 43699) ******************************************************************************** EST sequence 342 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 42630 to 44557): Exon 1 43339 43912 ( 574 n); cDNA 1 574 ( 574 n); score: 0.944 MATCH C08HBa0165B06.1+ SGN-E207413- 0.944 574 1.000 C PGS_C08HBa0165B06.1+_SGN-E207413- (43339 43912) Alignment (genomic DNA sequence = upper lines): CACAGAGTAC TTGTTAGAAT TCCACTTCAA GAATCCCTCA AAGACCCCAG ACTTTGAGCT 43398 |||||||| | ||||||||| |||||||||| |||||||||| | ||||||| || ||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 GTTGGTTCTC TTGGAAAATG TCACTTGGTA TGTTAACTTC TGCTTCAACT CCGAGAAAAT 43458 ||| || || |||||||||| |||||||||| ||||| |||| || ||||||| |||||||| | GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 TAGCTTGCGG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 43518 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTTGTG AATGTCTGAG GAGTTGATCC 43578 |||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 43638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 300 CGAGCAATTT ACTTTGCGTT TCAACAATTT ACCTACCTGT GAATTTGTGT AGTTCAAACC 43698 ||||||||| || ||||| |||||||| |||||||||| | |||||||| |||||||||| CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 360 ACACAAATAA GGTAGATAGT CCTCAAATGG GGTATCATAA ACTAGTCCTG GGTCATTTGC 43758 ||| |||||| |||| ||| | |||||||||| |||||||||| |||||||||| | |||||||| ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 420 CCTTGATGGA TTAACATGTC CTGCACCAAT TGCATAGATA TCAGCAGGAC TGAGCCTTTC 43818 ||| |||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||| CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 480 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATGA TTGCAGACTT 43878 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 540 AATAACAGCA GGAGACCAAT CAGGATGTGA GCTC 43912 |||||||||| |||||||||| ||||||||| ||| AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC 574 hqPGS_C08HBa0165B06.1+_SGN-E207413- (43339 43912) ******************************************************************************** EST sequence 105 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 40260 to 45787): Exon 1 43443 43885 ( 443 n); cDNA 1 443 ( 443 n); score: 0.871 MATCH C08HBa0165B06.1+ SGN-E287935+ 0.871 443 0.899 C PGS_C08HBa0165B06.1+_SGN-E287935+ (43443 43885) Alignment (genomic DNA sequence = upper lines): TCAACTCCGA GAAAATTAGC TTGCGGGGCT TAACTTTCAC GACAACGCCT TTAGGTGAAG 43502 ||||||| || |||| ||||| | | ||| | ||||| | | |||||||| | ||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTATCTGCAC CGTGTAAGAT GATTTGGCAT CACCAACATT GGTCACAGTT CTTGTGAATG 43562 ||| || ||| |||||||| ||| | |||| |||||||||| ||| |||||| || || ||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGT CTCGATATGC AAAATGAAGG ATAGTTTAAT TGTGCTTCAG 43622 |||||||||| |||||||||| | ||||| |||| ||||| |||||||||| ||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATACTTTC AACCTCCGAG CAATTTACTT TGCGTTTCAA CAATTTACCT ACCTGTGAAT 43682 ||||||||| ||||||||| ||||| || |||||| | || |||||| |||||| || GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TTGTGTAGTT CAAACCACAC AAATAAGGTA GATAGTCCTC AAATGGGGTA TCATAAACTA 43742 |||||| || ||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGGTC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATATCAG 43802 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGACTGAG CCTTTCGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG TCAGCGGTTG 43862 ||||| ||| |||||| ||| |||||||||| || | ||||| |||||| ||| ||||| |||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATGATTGC AGACTTAATA ACA 43885 |||| ||||| |||||||||| ||| TCATCATTGC AGACTTAATA ACA 443 hqPGS_C08HBa0165B06.1+_SGN-E287935+ (43443 43885) ******************************************************************************** EST sequence 178 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 42959 to 44883): Exon 1 43569 44202 ( 634 n); cDNA 1 634 ( 634 n); score: 0.937 MATCH C08HBa0165B06.1+ SGN-E213088- 0.937 634 1.000 C PGS_C08HBa0165B06.1+_SGN-E213088- (43569 44202) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 43628 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTCAACCTC CGAGCAATTT ACTTTGCGTT TCAACAATTT ACCTACCTGT GAATTTGTGT 43688 |||||||||| ||||||||| || ||||| |||||||| |||||||||| | |||||||| TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTCAAACC ACACAAATAA GGTAGATAGT CCTCAAATGG GGTATCATAA ACTAGTCCTG 43748 |||||||||| ||| |||||| |||| ||| | |||||||||| |||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GGTCATTTGC CCTTGATGGA TTAACATGTC CTGCACCAAT TGCATAGATA TCAGCAGGAC 43808 | |||||||| ||| |||||| |||||||||| ||||||| || |||||||||| |||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 TGAGCCTTTC GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATGA 43868 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGA GCTCTTCAGC AGAGCTGCTA 43928 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 43988 | |||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTTTTTGTT GCCATCCACG GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA 44048 ||| ||||| | ||||||| || ||||||| ||||||| || |||||||||| |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTCAAGATT CCACGACTAG CTGTATTTGG TCCCCGAGAA GAAAATGCAG 44108 |||||||||| ||||||||| ||| || ||| | || |||| ||| |||||| |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACTATTGG AGCATTTTTA TCTCCAATTA TTGTTCCTTG GAATGTGATT GTAGCAACAG 44168 |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGTTTAATAT TGAGTTTGTA TAGGCGCGAA TTTT 44202 |||| |||| |||||||||| ||||| |||| |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1+_SGN-E213088- (43569 44202) ******************************************************************************** EST sequence 415 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 43060 to 45371): Exon 1 43724 44132 ( 409 n); cDNA 1 409 ( 409 n); score: 0.851 MATCH C08HBa0165B06.1+ SGN-E317658- 0.851 409 1.000 C PGS_C08HBa0165B06.1+_SGN-E317658- (43724 44132) Alignment (genomic DNA sequence = upper lines): AATGGGGTAT CATAAACTAG TCCTGGGTCA TTTGCCCTTG ATGGATTAAC ATGTCCTGCA 43783 ||||| |||| |||||||||| |||||| ||| ||| || | |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCAATTGCAT AGATATCAGC AGGACTGAGC CTTTCGTCGA GTATTGGACT ACTGGCAAGG 43843 || |||||| ||| |||||| | | ||||| |||||||| | |||||||||| || ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAATGTGT CAGCGGTTGT CATGATTGCA GACTTAATAA CAGCAGGAGA CCAATCAGGA 43903 |||| ||||| |||| ||||| ||| ||||| |||||||| | |||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGAGCTCT TCAGCAGAGC TGCTACGCCA CTAAGGTGAG GGCAAGACAT TGAGGTGCCT 43963 |||| ||| | |||||||||| ||| || ||| |||||||||| ||||| |||| |||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATAATAT TGAATGTGGA TTTGGTGTTT TTGTTGCCAT CCACGGAGGT AGGCCAAGCA 44023 |||| |||| ||||||| || ||| |||||| |||||| || |||||||||| |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGATAT TAACACCAGG ACCGATTATG TCAGGTTTCA AGATTCCACG ACTAGCTGTA 44083 ||||||| | |||||||||| |||||||||| |||||||| | |||| ||| | || ||| GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 TTTGGTCCCC GAGAAGAAAA TGCAGCAACT ATTGGAGCAT TTTTATCTC 44132 ||||||| | | | ||| || |||| || || ||||||| |||| |||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1+_SGN-E317658- (43724 44132) ******************************************************************************** EST sequence 278 -strand 504 n (File: SGN-E288988-) 1 TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 61 GCACCTACTG TATTTTTTTT TTTTTTTTTT TGTGCTATTG TGCAAAGCTG CATCTTCTGA 121 ATCATACATT TCATTCTGTA CTCATACAAA CTGTGACAAA GACTCATGCT TTCAGTAACA 181 CAATTTACAA ACAAAAAAAG ACAACAATGG CAGAAACACA GTTTAGAAAA TGTGCCTGCA 241 AATGTGTTCC CAAGTAGCTA CTAGCAATAA CCAAAACGAC AACAGAATGT TTGAAAAATC 301 GAAAGACCAT TATCAGCAAG TGGTGATGGG ATTATCTTCA GAGGATTCAG CAGCAGAAGC 361 AACTATCAAC TGAGGCTCAG GGATGACACC TTCTCTTCGT GCCTTTCTAC GTTCACGTTG 421 TAATCTGAAG GACTCTCTCT TTCGGTTTCT ATAGCTGTTG GGGTTTTCAG GTTGCACCTC 481 GCGTGGATAA ACACTTATCT TTTT Predicted gene structure (within gDNA segment 43903 to 49504): Exon 1 44513 44584 ( 72 n); cDNA 1 72 ( 72 n); score: 0.972 Intron 1 44585 45711 (1127 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0) Exon 2 45712 45735 ( 24 n); cDNA 73 96 ( 24 n); score: 0.708 Intron 2 45736 45816 ( 81 n); Pd: 0.000 (s: 0), Pa: 0.063 (s: 0) Exon 3 45817 45838 ( 22 n); cDNA 97 118 ( 22 n); score: 0.636 MATCH C08HBa0165B06.1+ SGN-E288988- 0.972 118 0.234 C PGS_C08HBa0165B06.1+_SGN-E288988- (44513 44584,45712 45735,45817 45838) Alignment (genomic DNA sequence = upper lines): TCAAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 44572 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 60 GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGTGA TGGACCACTA 44632 |||||||||| || GCACCTACTG TA........ .......... .......... .......... .......... 72 TTTCCGGCAG AACAACTAAC AAGAATGCCT CTTTGTGTTG TACTGTACGC CCCGAGAGCA 44692 .......... .......... .......... .......... .......... .......... 72 ATAGTTTCAT CATAAAGAGG GCTCAGAGAT CCACCAAGGG AGATTGAAAG AATATCTACT 44752 .......... .......... .......... .......... .......... .......... 72 CCATCATCTA TAGCTGCATC CATGGCAGCT AAAATATCAC TGCCAGGACA CTTTCCATCG 44812 .......... .......... .......... .......... .......... .......... 72 AAACCACATA CCTTATATAT GGCTATATGG GCAAGAGGAG CAACACCAAC TGCAGTTCCA 44872 .......... .......... .......... .......... .......... .......... 72 TTAGCATTGC CATGTACATT AGCACCTTTC ACAAAAGCCC CCGCAGCTGT GCTTGCTGTG 44932 .......... .......... .......... .......... .......... .......... 72 TGTGTACCAT GTCCATCATT ATCTATCGGG GAAGCATTGC CAAGTTCGTA AGACCTGGCT 44992 .......... .......... .......... .......... .......... .......... 72 CCAATGAGCT TGTTGTTACA CTTGTTGGTG AAATTGGACT TACAAACTCC TTTCCACTTA 45052 .......... .......... .......... .......... .......... .......... 72 GCTGGCGGGG AAGGCATCCC AACGTCGCTA AAAGAAGGAT GGTCAGGAAT AATTCCAGTG 45112 .......... .......... .......... .......... .......... .......... 72 TCTAGAACTC CGATGATCAC GCCTTTCCCA TAGTTGGAAT CCTTCCATAC ACCCTTGTTC 45172 .......... .......... .......... .......... .......... .......... 72 TGCTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTGTGCA AGGACAAAAT CCTCTGTTTC 45232 .......... .......... .......... .......... .......... .......... 72 TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTTCTGC AGTTAATCTT 45292 .......... .......... .......... .......... .......... .......... 72 GCTGCAAACC CCGTCATCAC ATTGTGATAG GAATAGATAA TGCTGGCTGC CTCTTCATTT 45352 .......... .......... .......... .......... .......... .......... 72 CCACTCGAAC TAATTGCGGA CATAGTTTCA GGCAAAAAGG AAAGGTAATA GCTCTCTAAA 45412 .......... .......... .......... .......... .......... .......... 72 TCCATGAACG ACGATTGAGT AGTAATTAGG CTTTCAGGGG ATTCAACATG GACTATATAA 45472 .......... .......... .......... .......... .......... .......... 72 GTTTCGAAAT CACTCTGAAT AGTAGGCCAT GGGAAAGAAC AAAAGATGAA AACAAAAAAG 45532 .......... .......... .......... .......... .......... .......... 72 ATTTTGAGGA ATCCCATGGC TGAAGTGATA ATGTATTTGA TGAATTTTTC TGCTTTGATG 45592 .......... .......... .......... .......... .......... .......... 72 CAACTGTCTA TTTATACTTC ATCTTTGCTC ATGACTTTAT TTAGCTAGTG GAGAAAAAGA 45652 .......... .......... .......... .......... .......... .......... 72 ATAATGTGGA CAACATAGTT AAAATTAATA AATCTAACTG TCTCTAACTA TTTGTCTACA 45712 .......... .......... .......... .......... .......... .........T 73 ATTTTTTTAT TGTTTTTAGT TGTCTCTAAT TACTTGTTTA TTTTTATAAA TCACTAGGCG 45772 ||||||| | | ||||| || | TTTTTTTTTT TTTTTTTTGT GCT....... .......... .......... .......... 96 TGAATAAACT AGTTAAACTG AACTTTATTC TATGAAATTT GTAGATTTTC CAGAAGACCA 45832 ||| | || | || .......... .......... .......... .......... ....ATTGTG CAAAGCTGCA 112 TCCTCT 45838 || ||| TCTTCT 118 hqPGS_C08HBa0165B06.1+_SGN-E288988- (44513 44584,45712 45735) ******************************************************************************** EST sequence 216 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 37687 to 45373): Exon 1 43549 44256 ( 708 n); cDNA 1 708 ( 708 n); score: 0.934 MATCH C08HBa0165B06.1+ SGN-E213673- 0.934 708 1.000 C PGS_C08HBa0165B06.1+_SGN-E213673- (43549 44256) Alignment (genomic DNA sequence = upper lines): AGTTCTTGTG AATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT 43608 |||||| ||| ||||||||| |||||||||| |||||||||| ||||||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTT ACTTTGCGTT TCAACAATTT 43668 |||||||||| |||||||||| |||||||||| ||||||||| || ||||| |||||||| TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTGT GAATTTGTGT AGTTCAAACC ACACAAATAA GGTAGATAGT CCTCAAATGG 43728 |||||||||| | |||||||| |||||||||| ||| |||||| |||| ||| | |||||||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 GGTATCATAA ACTAGTCCTG GGTCATTTGC CCTTGATGGA TTAACATGTC CTGCACCAAT 43788 |||||||||| |||||||||| | |||||||| ||| |||||| |||||||||| ||||||| || GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 TGCATAGATA TCAGCAGGAC TGAGCCTTTC GTCGAGTATT GGACTACTGG CAAGGTTTAA 43848 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 TGTGTCAGCG GTTGTCATGA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGA 43908 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 GCTCTTCAGC AGAGCTGCTA CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT 43968 ||||||||| |||||||||| | |||||||| ||| |||||| ||||| |||| |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 AATATTGAAT GTGGATTTGG TGTTTTTGTT GCCATCCACG GAGGTAGGCC AAGCAGCAAG 44028 |||||||||| |||||||||| ||| ||||| | ||||||| || ||||||| ||||||| || AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATT CCACGACTAG CTGTATTTGG 44088 |||||||||| |||||||| | |||||||||| ||||||||| ||| || ||| | || |||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCCCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA TTGTTCCTTG 44148 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GAATGTGATT GTAGCAACAG GGTTTAATAT TGAGTTTGTA TAGGCGCGAA TTTTTGTTCC 44208 || ||||||| |||||||||| |||| |||| |||||||||| ||||| |||| |||| |||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 44256 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 708 hqPGS_C08HBa0165B06.1+_SGN-E213673- (43549 44256) ******************************************************************************** EST sequence 195 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 37550 to 45187): Exon 1 43673 44376 ( 704 n); cDNA 1 704 ( 704 n); score: 0.946 MATCH C08HBa0165B06.1+ SGN-E212584- 0.946 704 1.000 C PGS_C08HBa0165B06.1+_SGN-E212584- (43673 44376) Alignment (genomic DNA sequence = upper lines): ACCTGTGAAT TTGTGTAGTT CAAACCACAC AAATAAGGTA GATAGTCCTC AAATGGGGTA 43732 ||||||| || |||||||||| ||||||||| |||||||||| ||| ||||| |||||||||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGGTC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA 43792 |||||||||| ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 TAGATATCAG CAGGACTGAG CCTTTCGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 43852 |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| |||||||||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCGGTTG TCATGATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGAGCTC 43912 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||| ||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCTACGCC ACTAAGGTGA GGGCAAGACA TTGAGGTGCC TGATATAATA 43972 |||||||||| ||||||| || ||||||||| |||||||||| | |||||||| |||||||||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTT TTTGTTGCCA TCCACGGAGG TAGGCCAAGC AGCAAGGATA 44032 |||||||||| ||||||||| |||||| || ||||| || | |||||||||| ||| |||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCGATTAT GTCAGGTTTC AAGATTCCAC GACTAGCTGT ATTTGGTCCC 44092 |||||||||| |||| ||||| |||||||||| ||||| ||| || ||| | | | ||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTATTGT TCCTTGGAAT 44152 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| | CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GTGATTGTAG CAACAGGGTT TAATATTGAG TTTGTATAGG CGCGAATTTT TGTTCCATCT 44212 |||||||||| |||||||||| |||||||| |||||||||| | |||||||| |||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 44272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 44332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 TCAACATTGG CAACACCGCC GAATGCTAAG CATAATACTA TCTT 44376 |||||||||| | |||||||| ||||||||| |||||||||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1+_SGN-E212584- (43673 44376) ******************************************************************************** EST sequence 245 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 42830 to 46971): Exon 1 43703 44292 ( 590 n); cDNA 3 592 ( 590 n); score: 0.851 MATCH C08HBa0165B06.1+ SGN-E329031- 0.851 590 0.997 C PGS_C08HBa0165B06.1+_SGN-E329031- (43703 44292) Alignment (genomic DNA sequence = upper lines): AAATAAGGTA GATAGTCCTC AAATGGGGTA TCATAAACTA GTCCTGGGTC ATTTGCCCTT 43762 |||||||| | ||||| || ||||| ||| |||||||||| ||||||| || | | | || AAATAAGGAA TGTAGTCTTC GAATGGTGTA TCATAAACTA GTCCTGGATC ACTGNCTCTC 62 GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATATCAG CAGGACTGAG CCTTTCGTCG 43822 |||||||||| |||||||||| ||| |||||| ||| ||||| ||| | |||| ||||||||| GATGGATTAA CATGTCCTGC ACCCATTGCA AAGAGATCAG CAGAAATGAG CCTTTCGTCC 122 AGTATTGGAC TACTGGCAAG GTTTAATGTG TCAGCGGTTG TCATGATTGC AGACTTAATA 43882 |||||||||| | |||| || ||||| |||| ||||| |||| |||| ||||| ||||||||| AGTATTGGAC TGTTGGCGAG GTTTACTGTG TCAGCTGTTG TCATCATTGC TGACTTAATA 182 ACAGCAGGAG ACCAATCAGG ATGTGAGCTC TTCAGCAGAG CTGCTACGCC ACTAAGGTGA 43942 | ||||||| |||||||||| ||||| |||| |||||||||| |||| || || |||||||||| GCTGCAGGAG ACCAATCAGG ATGTGCGCTC TTCAGCAGAG CTGCAACACC ACTAAGGTGA 242 GGGCAAGACA TTGAGGTGCC TGATATAATA TTGAATGTGG ATTTGGTGTT TTTGTTGCCA 44002 |||||||||| ||||||| || |||| ||| |||||||| | |||| ||||| ||||||| | GGGCAAGACA TTGAGGTTCC GGATACTATA TTGAATGTTG ATTTTGTGTT TTTGTTGTTA 302 TCCACGGAGG TAGGCCAAGC AGCAAGGATA TTAACACCAG GACCGATTAT GTCAGGTTTC 44062 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||||||||| TCCACGGAGG TAGGCCAAGC AGCAAGGACG TTAACACCAG GACCGATTAT GTCAGGTTTT 362 AAGATTCCAC GACTAGCTGT ATTTGGTCCC CGAGAAGAAA ATGCAGCAAC TATTGGAGCA 44122 ||||| ||| |||| ||| ||||||| || || |||| ||| |||||| ||| |||||| AAGATGCCAG GACTTGCTAC GCTTGGTCCT CGTGAGGAAA ATGAAGCAAC TATAGGAGCA 422 TTTTTATCTC CAATTATTGT TCCTTGGAAT GTGATTGTAG CAACAGGGTT TAATATTGAG 44182 ||||| |||| |||||| || ||| ||||| ||||||| || |||| || || | | |||| TTTTTGTCTC CAATTACAGT TCCATGGAAG GTGATTGAAG CAACCGGATT TGAAGATGAG 482 TTTGTATAGG CGCGAATTTT TGTTCCATCT GCAGCTGAAA CAACCAATGC TGGAAGAACA 44242 || |||||| | ||||||| ||||||| ||| ||||| || ||||||| ||||| ||| TTCATATAGG CAAGAATTTT CTTTCCATCA GCATTTGAAA CATCCAATGC AGGAAGGACA 542 TGAGCATCAG CTGATTTAGT GACACCATAT TGTGATGGGT TGATGACAAT 44292 ||||| |||| |||||||||| ||||| | | | | | | |||||| ||| TGAGCTTCAG CTGATTTAGT CACACCCTCT TCTTGTTCAT TGATGAGAAT 592 hqPGS_C08HBa0165B06.1+_SGN-E329031- (43703 44292) ******************************************************************************** EST sequence 288 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 42853 to 45531): Exon 1 43787 44394 ( 608 n); cDNA 1 605 ( 605 n); score: 0.890 MATCH C08HBa0165B06.1+ SGN-E308535- 0.890 608 1.005 C PGS_C08HBa0165B06.1+_SGN-E308535- (43787 44394) Alignment (genomic DNA sequence = upper lines): ATTGCATAGA TATCAGCAGG ACTGAGCCTT TCGTCGAGTA TTGGACTACT GGCAAGGTTT 43846 |||||| ||| | || ||||| | | | || || || |||| |||||||||| |||||||||| ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 60 AATGTGTCAG CGGTTGTCAT GATTGCAGAC TTAATAACAG CAGGAGACCA ATCAGGATGT 43906 || |||| || |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 120 GAGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATTGA GGTGCCTGAT 43966 | |||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 180 ATAATATTGA ATGTGGATTT GGTGTTTTTG TTGCCATCCA CGGAGGTAGG CCAAGCAGCA 44026 |||||||||| |||||||||| ||| |||||| ||| |||||| |||||||||| |||||||||| ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 240 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TTCCACGACT AGCTGTATTT 44086 |||||||||| |||||||||| |||||||||| |||||||||| | ||| |||| || | ||||| AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 300 GGTCCCCGAG AAGAAAATGC AGCAACTATT GGAGCATTTT TATCTCCAAT TATTGTTCCT 44146 ||||| |||| ||||||||| ||||||||| ||||| |||| ||||||||| |||||||||| GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 360 TGGAATGTGA TTGTAGCAAC AGGGTTTAAT ATTGAGTTTG TATAGGCGCG AATTTTTGTT 44206 |||||||||| || |||| ||||||| || |||||||||| |||| | | |||| | || TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 420 CCATCTGCAG CTGAAACAAC CAATGCTGGA AGAACATGAG CATCAGCTGA TTTAGTGACA 44266 |||||||||| ||||||| | ||| |||||| |||||||||| |||||||||| ||| |||||| CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 480 CCATATTGTG ATGGGTTGAT GACAATCATG CCAACACCTC CAGCATCCTT CACAGCTTGT 44326 |||| || || ||||||| | ||||||| |||||||||| |||||||||| |||||||||| CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 540 CCTTTATCAA CATTGGCAAC ACCGCCGAAT GCTAAGCATA ATACTATCTT TCCTCTTATA 44386 ||||| ||| | || | ||| | || | ||| |||| |||||||| |||| |||| CCTTTTACAA CCTTAGAAAC GACACC--TG GATAA-CATA TGACTATCTT TCCTTTTATT 597 GCAGGGTC 44394 |||||||| GCAGGGTC 605 hqPGS_C08HBa0165B06.1+_SGN-E308535- (43787 44394) ******************************************************************************** EST sequence 362 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 37939 to 44734): Exon 1 43855 44517 ( 663 n); cDNA 1 663 ( 663 n); score: 0.932 MATCH C08HBa0165B06.1+ SGN-E397025- 0.932 663 1.000 C PGS_C08HBa0165B06.1+_SGN-E397025- (43855 44517) Alignment (genomic DNA sequence = upper lines): AGCGGTTGTC ATGATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGAGCTCTT 43914 ||| |||||| || ||||||| | |||||||| |||||||||| |||||||||| ||| || || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATAATATT 43974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTTTT TGTTGCCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 44034 |||||||||| |||||||| | ||||| |||| |||||||||| |||||||||| |||||||||| GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCGATTATGT CAGGTTTCAA GATTCCACGA CTAGCTGTAT TTGGTCCCCG 44094 | |||||||| |||||||||| |||| ||||| ||||||| || |||||| || ||||||| | AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 AGAAGAAAAT GCAGCAACTA TTGGAGCATT TTTATCTCCA ATTATTGTTC CTTGGAATGT 44154 || |||||| |||||||| | | |||||||| ||| |||||| |||||||||| ||||||||| TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGTAGCA ACAGGGTTTA ATATTGAGTT TGTATAGGCG CGAATTTTTG TTCCATCTGC 44214 ||||||||| |||||| || || ||||||| | || || ||||||||| |||| ||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 44274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TGATGGGTTG ATGACAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 44334 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACATTGGCA ACACCGCCGA ATGCTAAGCA TAATACTATC TTTCCTCTTA TAGCAGGGTC 44394 ||||||||| ||| ||||| |||| | || |||||||||| |||||||||| |||||||||| AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 AGTGAGTGAC CCTCGTCTGC AATAAGGTGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 44454 ||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCAAATAGA GTGAAGAATG TTGCGTTTGA AGTCTTTGGA TGATAAGCAG ATTCTCCTTC 44514 |||||||||| |||||||||| ||||||| || | |||||||| ||||||||| |||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 AAA 44517 ||| AAA 663 hqPGS_C08HBa0165B06.1+_SGN-E397025- (43855 44517) ******************************************************************************** EST sequence 169 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 43213 to 47271): Exon 1 43949 44568 ( 620 n); cDNA 1 617 ( 617 n); score: 0.858 MATCH C08HBa0165B06.1+ SGN-E306389- 0.858 620 1.005 C PGS_C08HBa0165B06.1+_SGN-E306389- (43949 44568) Alignment (genomic DNA sequence = upper lines): GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG TGTTTTTGTT GCCATCCACG 44008 ||||| |||| ||| |||||| |||||||||| |||||||||| | |||||||| | |||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATT 44068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCACGACTAG CTGTATTTGG TCCCCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA 44128 ||| |||||| | ||||||| ||| |||||| ||||||| || ||||||| || ||| |||| | CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA TTGTTCCTTG GAATGTGATT GTAGCAACAG GGTTTAATAT TGAGTTTGTA 44188 |||||||||| |||||||||| |||||||||| |||| || ||||| |||| |||||||||| TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAGGCGCGAA TTTTTGTTCC ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA 44248 || | ||| || | |||| |||||||||| ||||| ||| | |||||||| |||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGATT TAGTGACACC ATATTGTGAT GGGTTGATGA CAATCATGCC AACACCTCCA 44308 |||||||||| | |||||||| || || || |||||||| ||||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTCA CAGCTTGTCC TTTATCAACA TTGGCAACAC CGCCGAATGC TAAGCATAAT 44368 |||||||||| |||||||||| ||| |||| || | ||| | || | ||| |||| GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACC--TGGA TAA-CATATG 417 ACTATCTTTC CTCTTATAGC AGGGTCAGTG AGTGACCCTC GTCTGCAATA AGGTGTTTCG 44428 |||||||||| || |||| || |||||||||| ||||||||| || |||| || ||| |||| ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 GATGGATCTT TTGCATTTTT TGCAGCATCA AATAGAGTGA AGAATGTTGC GTTTGAAGTC 44488 |||||||| | | ||| || ||||||| | ||||||| ||||| ||| || ||| || GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TTTGGATGAT AAGCAGATTC TCCTTCAAAT TCCTCTCCAT TTCCAAGCTT AACAGTAGCT 44548 | |||| ||| ||| || ||| ||||||||| |||||| || ||||||| | ||||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTATCTTTC TATCAAGCGT 44568 |||||||||| ||||| || TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1+_SGN-E306389- (43949 44568) ******************************************************************************** EST sequence 224 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 39203 to 45386): Exon 1 44016 44786 ( 771 n); cDNA 1 771 ( 771 n); score: 0.804 MATCH C08HBa0165B06.1+ SGN-E540271- 0.804 771 1.000 C PGS_C08HBa0165B06.1+_SGN-E540271- (44016 44786) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGATATTA ACACCAGGAC CGATTATGTC AGGTTTCAAG ATTCCACGAC 44075 |||||||||| ||||| ||| |||||||||| |||||||||| |||||| ||| || ||| ||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGCTGTATT TGGTCCCCGA GAAGAAAATG CAGCAACTAT TGGAGCATTT TTATCTCCAA 44135 | ||| | |||||| || || ||||||| ||||||||| ||||||||| || ||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTATTGTTCC TTGGAATGTG ATTGTAGCAA CAGGGTTTAA TATTGAGTTT GTATAGGCGC 44195 ||| ||||| ||||| ||| |||| ||||| | || ||| | |||||| ||||||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GAATTTTTGT TCCATCTGCA GCTGAAACAA CCAATGCTGG AAGAACATGA GCATCAGCTG 44255 ||||||| | |||||| ||| ||||||| ||||||| || ||| |||||| || ||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTGAC ACCATATTGT GATGGGTTGA TGACAATCAT GCCAACACCT CCAGCATCCT 44315 ||||||| || ||| | || | | |||| ||| |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TCACAGCTTG TCCTTTATCA ACATTGGCAA CACCGCCGAA TGCTAAGCAT AATACTATCT 44375 | || | ||| ||||| | || || || || || | || || || ||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TTCCTCTTAT AGCAGGGTCA GTGAGTGACC CTCGTCTGCA ATAAGGTGTT TCGGATGGAT 44435 | ||| | || |||||||||| | ||||| | || | || || | |||| | || ||| TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CTTTTGCATT TTTTGCAGCA TCAAATAGAG TGAAGAATGT TGCGTTTGAA GTCTTTGGAT 44495 | || |||| ||| ||||| ||| |||||| ||||||||| || ||| ||| |||||||||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTCA AATTCCTCTC CATTTCCAAG CTTAACAGTA GCTTTTATCT 44555 |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| | || | | GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTATCAAG CGTGCTGGCA CCTACTGTAA GAATCCAAGG GGCTGAGTTA TCTACTGAGG 44615 |||||||| | || |||||| || || || | ||||||| || |||| ||| |||| | | TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 CAGGTGATGG ACCACTATTT CCGGCAGAAC AACTAACAAG AATGCCTCTT TGTGTTGTAC 44675 || | || || ||| ||||| || || || ||| |||| ||| |||||| | ||||| || CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TGTACGCCCC GAGAGCAATA GTTTCATCAT AAAGAGGGCT CAGAGATCCA CCAAGGGAGA 44735 |||||| ||| |||||||||| ||||||| | ||| | | |||| |||||||||| TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 720 TTGAAAGAAT ATCTACTCCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 44786 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| | TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 771 hqPGS_C08HBa0165B06.1+_SGN-E540271- (44016 44786) ******************************************************************************** EST sequence 270 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 43327 to 44979): Exon 1 44018 44379 ( 362 n); cDNA 1 362 ( 362 n); score: 0.950 MATCH C08HBa0165B06.1+ SGN-E200689- 0.950 362 1.000 C PGS_C08HBa0165B06.1+_SGN-E200689- (44018 44379) Alignment (genomic DNA sequence = upper lines): CAAGCAGCAA GGATATTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT TCCACGACTA 44077 |||||||| | |||||||||| ||||||||| |||||||||| |||||||||| ||| || || CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GCTGTATTTG GTCCCCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 44137 | | || ||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 ATTGTTCCTT GGAATGTGAT TGTAGCAACA GGGTTTAATA TTGAGTTTGT ATAGGCGCGA 44197 | |||||||| ||| |||||| |||||||||| ||||| ||| |||||||||| |||||| ||| ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTTTTGTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 44257 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 44317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 300 ACAGCTTGTC CTTTATCAAC ATTGGCAACA CCGCCGAATG CTAAGCATAA TACTATCTTT 44377 |||||||||| |||||||||| |||||| ||| |||||||||| |||| ||||| |||||||||| ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 360 CC 44379 || CC 362 hqPGS_C08HBa0165B06.1+_SGN-E200689- (44018 44379) ******************************************************************************** EST sequence 154 -strand 490 n (File: SGN-E282432-) 1 GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 61 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 121 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 181 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 241 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 301 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 361 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 421 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 481 ATCCTTCAAA Predicted gene structure (within gDNA segment 41780 to 45441): Exon 1 44028 44517 ( 490 n); cDNA 1 490 ( 490 n); score: 0.916 MATCH C08HBa0165B06.1+ SGN-E282432- 0.916 490 1.000 C PGS_C08HBa0165B06.1+_SGN-E282432- (44028 44517) Alignment (genomic DNA sequence = upper lines): GGATATTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT TCCACGACTA GCTGTATTTG 44087 |||||||| | |||||| ||| |||||||||| | |||||||| |||| ||||| ||| || ||| GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 60 GTCCCCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT ATTGTTCCTT 44147 |||| | || ||||||||| ||||| || | |||||||||| ||||||||| |||||||||| GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 120 GGAATGTGAT TGTAGCAACA GGGTTTAATA TTGAGTTTGT ATAGGCGCGA ATTTTTGTTC 44207 |||||| || |||||||||| ||| || || ||||||| | || || || |||||||||| GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 180 CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 44267 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 240 CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 44327 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 300 CTTTATCAAC ATTGGCAACA CCGCCGAATG CTAAGCATAA TACTATCTTT CCTCTTATAG 44387 |||||||||| |||||| ||| ||||| || || | ||||| |||||||||| |||||||||| CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 360 CAGGGTCAGT GAGTGACCCT CGTCTGCAAT AAGGTGTTTC GGATGGATCT TTTGCATTTT 44447 |||||||||| |||||| ||| |||||||||| |||| ||||| |||||||||| |||||||||| CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 420 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTTGAAGT CTTTGGATGA TAAGCAGATT 44507 |||||||||| |||||||||| |||||||||| |||| ||| | ||||||| || |||||| | TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 480 CTCCTTCAAA 44517 ||||||||| ATCCTTCAAA 490 hqPGS_C08HBa0165B06.1+_SGN-E282432- (44028 44517) ******************************************************************************** EST sequence 375 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 43013 to 45202): Exon 1 44048 44539 ( 492 n); cDNA 3 494 ( 492 n); score: 0.953 MATCH C08HBa0165B06.1+ SGN-E210009- 0.953 492 0.996 C PGS_C08HBa0165B06.1+_SGN-E210009- (44048 44539) Alignment (genomic DNA sequence = upper lines): ATTATGTCAG GTTTCAAGAT TCCACGACTA GCTGTATTTG GTCCCCGAGA AGAAAATGCA 44107 |||||||||| |||||||||| ||| || || | | || ||| |||| ||||| |||||||||| ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG GTCCGCGAGA AGAAAATGCA 62 GCAACTATTG GAGCATTTTT ATCTCCAATT ATTGTTCCTT GGAATGTGAT TGTAGCAACA 44167 |||||||||| |||||||||| |||||||||| | |||||||| ||| |||||| |||||||||| GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT GGATTGTGAT TGTAGCAACA 122 GGGTTTAATA TTGAGTTTGT ATAGGCGCGA ATTTTTGTTC CATCTGCAGC TGAAACAACC 44227 ||||| ||| |||||||||| |||||| ||| ||||| ||| |||||||||| |||||||||| GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC CATCTGCAGC TGAAACAACC 182 AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 44287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 242 ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCAACA 44347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA 302 CCGCCGAATG CTAAGCATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT 44407 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCGAATG CTAAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT 362 CGTCTGCAAT AAGGTGTTTC GGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 44467 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| CGTCTGCAAT AAGGGGTTTC AGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 422 AAGAATGTTG CGTTTGAAGT CTTTGGATGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 44527 |||||||||| ||| ||| | ||||||| || |||||||||| |||||||||| |||||||||| AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 482 TTTCCAAGCT TA 44539 ||||| |||| || TTTCCGAGCT TA 494 hqPGS_C08HBa0165B06.1+_SGN-E210009- (44048 44539) ******************************************************************************** EST sequence 237 -strand 504 n (File: SGN-E301429-) 1 CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 61 GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 121 GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 181 TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 241 ACAACCTTAG AAACGACACC TGGATAACAT ATGACTATCT TTCCTTTTAT TGCAGGGTCA 301 GTGAGTGACC CTGGTTTGCA GTAAGGGGTT TTAGATGGAT CACCTTTACC TTTTGAAGCA 361 TCATACAGAG TGAAGAATTT TGAGTCGGAA ATCTGTGGAC GATAAGAAGC TTCCCCTTCA 421 AATTCCTCTG TATTTCCAAG TGTAACAGTA ACTTTTATCT TTCTATCAGT AGTGCTGGCG 481 CCTACCGTAA GAATCCAAGG GGCG Predicted gene structure (within gDNA segment 43168 to 45208): Exon 1 44093 44598 ( 506 n); cDNA 1 503 ( 503 n); score: 0.840 MATCH C08HBa0165B06.1+ SGN-E301429- 0.840 506 1.004 C PGS_C08HBa0165B06.1+_SGN-E301429- (44093 44598) Alignment (genomic DNA sequence = upper lines): CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTATTGT TCCTTGGAAT 44152 |||||||||| ||| |||||| ||| ||||| |||| ||||| |||||||||| |||||||||| CGAGAAGAAA ATGAAGCAAC TATGGGAGCG TTTTCATCTC CAATTATTGT TCCTTGGAAT 60 GTGATTGTAG CAACAGGGTT TAATATTGAG TTTGTATAGG CGCGAATTTT TGTTCCATCT 44212 |||||| ||| | |||||| | |||||||| |||||||| | ||||| | |||||||| GTGATTTTAG CTGTAGGGTT TGATATTGAG TTTGTATAAG TAAGAATTCT GATTCCATCT 120 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 44272 |||||||||| | |||| || |||||||||| |||||||||| ||||||| || |||||||| | GCAGCTGAAA CCTCCAAAGC TGGAAGAACA TGAGCATCAG CTGATTTTGT GACACCATCT 180 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 44332 | || ||| ||||| |||| ||| |||||| |||||||||| |||||||||| ||||||||| TCTGGCAGGT TGATGGCAAT CATACCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTT 240 TCAACATTGG CAACACCGCC GAATGCTAAG CATAATACTA TCTTTCCTCT TATAGCAGGG 44392 |||| || | ||| | || | ||| |||| |||| |||||||| | ||| |||||| ACAACCTTAG AAACGACACC --TGGATAA- CATATGACTA TCTTTCCTTT TATTGCAGGG 297 TCAGTGAGTG ACCCTCGTCT GCAATAAGGT GTTTCGGATG GATCTTTTGC ATTTTTTGCA 44452 |||||||||| ||||| || | ||| ||||| |||| |||| |||| | | ||||| | TCAGTGAGTG ACCCTGGTTT GCAGTAAGGG GTTTTAGATG GATCACCTTT ACCTTTTGAA 357 GCATCAAATA GAGTGAAGAA TGTTGCGTTT GAAGTCTTTG GATGATAAGC AGATTCTCCT 44512 |||||| | | |||||||||| | ||| || ||| ||| || || |||||| || ||| ||| GCATCATACA GAGTGAAGAA TTTTGAGTCG GAAATCTGTG GACGATAAGA AGCTTCCCCT 417 TCAAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 44572 |||||||||| || |||||| ||| ||||| ||| |||||| |||||||||| | |||||| TCAAATTCCT CTGTATTTCC AAGTGTAACA GTAACTTTTA TCTTTCTATC AGTAGTGCTG 477 GCACCTACTG TAAGAATCCA AGGGGC 44598 || ||||| | |||||||||| |||||| GCGCCTACCG TAAGAATCCA AGGGGC 503 hqPGS_C08HBa0165B06.1+_SGN-E301429- (44093 44598) ******************************************************************************** EST sequence 204 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 42820 to 45386): Exon 1 44132 44786 ( 655 n); cDNA 1 655 ( 655 n); score: 0.907 MATCH C08HBa0165B06.1+ SGN-E335107- 0.907 655 1.000 C PGS_C08HBa0165B06.1+_SGN-E335107- (44132 44786) Alignment (genomic DNA sequence = upper lines): CCAATTATTG TTCCTTGGAA TGTGATTGTA GCAACAGGGT TTAATATTGA GTTTGTATAG 44191 |||||||||| |||||||||| || |||||| ||||||||| || || |||| ||| | || CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCGCGAATTT TTGTTCCATC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 44251 || |||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGACAA TCATGCCAAC ACCTCCAGCA 44311 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 180 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCAACACCGC CGAATGCTAA GCATAATACT 44371 |||||||||| |||||||||| |||||||||| || ||| || ||| |||| | ||||||||| TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 240 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GACCCTCGTC TGCAATAAGG TGTTTCGGAT 44431 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ||||||||| ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 300 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT TGAAGTCTTT 44491 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 360 GGATGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCTTAAC AGTAGCTTTT 44551 ||| |||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 420 ATCTTTCTAT CAAGCGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGA GTTATCTACT 44611 |||||||| | |||||||||| ||||||||| |||||||||| ||||||| | ||| || || ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 480 GAGGCAGGTG ATGGACCACT ATTTCCGGCA GAACAACTAA CAAGAATGCC TCTTTGTGTT 44671 | | | | |||||||||| |||||| ||| |||||||| | ||||||| || ||||| ||| GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 540 GTACTGTACG CCCCGAGAGC AATAGTTTCA TCATAAAGAG GGCTCAGAGA TCCACCAAGG 44731 | |||||||| |||||| ||| |||| | || || | || || | || ||||| |||| GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 600 GAGATTGAAA GAATATCTAC TCCATCATCT ATAGCTGCAT CCATGGCAGC TAAAA 44786 || ||||||| |||||||||| |||||||||| ||||||| || |||||||||| ||||| GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 655 hqPGS_C08HBa0165B06.1+_SGN-E335107- (44132 44786) ******************************************************************************** EST sequence 391 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 43482 to 45325): Exon 1 44146 44698 ( 553 n); cDNA 1 556 ( 556 n); score: 0.941 MATCH C08HBa0165B06.1+ SGN-E208913- 0.941 553 0.995 C PGS_C08HBa0165B06.1+_SGN-E208913- (44146 44698) Alignment (genomic DNA sequence = upper lines): TTGGAATGTG ATTGTAGCAA CAGGGTTTAA TATTGAGTTT GTATAGGCGC GAATTTTTGT 44205 ||||| |||| |||||||||| ||||||| | |||||||||| |||||||| | ||||||| | TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCATCTGCA GCTGAAACAA CCA---ATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 44262 |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| |||||||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 44322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 180 TTGTCCTTTA TCAACATTGG CAACACCGCC GAATGCTAAG CATAATACTA TCTTTCCTCT 44382 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||||||||| TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 240 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGT GTTTCGGATG GATCTTTTGC 44442 |||||||||| |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 300 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGCGTTT GAAGTCTTTG GATGATAAGC 44502 |||||||||| |||||||||| |||||||||| ||||| ||| ||| |||||| || ||||||| ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 360 AGATTCTCCT TCAAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTATC 44562 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 420 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGTGA 44622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 480 TGGACCACTA TTTCCGGCAG AACAACTAAC AAGAATGCCT CTTTGTGTTG TACTGTACGC 44682 |||||| || || || || | | |||||||| |||||||||| |||||||||| ||||||||| AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 540 CCCGAGAGCA ATAGTT 44698 |||||||||| ||| || CCCGAGAGCA ATACTT 556 hqPGS_C08HBa0165B06.1+_SGN-E208913- (44146 44698) ******************************************************************************** EST sequence 252 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 41123 to 45511): Exon 1 44208 44785 ( 578 n); cDNA 1 578 ( 578 n); score: 0.789 MATCH C08HBa0165B06.1+ SGN-E286017- 0.789 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E286017- (44208 44785) Alignment (genomic DNA sequence = upper lines): CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 44267 |||| ||| ||||||| || ||||| |||| | |||||||| |||| |||| ||||| |||| CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 60 CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 44327 | | || | | |||||| | |||||||| |||||||||| ||||||||| || | ||||| CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 120 CTTTATCAAC ATTGGCAACA CCGCCGAATG CTAAGCATAA TACTATCTTT CCTCTTATAG 44387 ||| | |||| || || | | | || || || |||||||| ||| | |||| CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 180 CAGGGTCAGT GAGTGACCCT CGTCTGCAAT AAGGTGTTTC GGATGGATCT TTTGCATTTT 44447 |||||||| | ||||| ||| | || ||| |||| | || |||| || |||| | CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 240 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTTGAAGT CTTTGGATGA TAAGCAGATT 44507 || ||||||| | |||||| | |||||||||| ||| ||||| |||||||||| |||||||||| TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 300 CTCCTTCAAA TTCCTCTCCA TTTCCAAGCT TAACAGTAGC TTTTATCTTT CTATCAAGCG 44567 |||||||||| |||||| | | |||||||||| |||||||| | || | ||| |||||| | | CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 360 TGCTGGCACC TACTGTAAGA ATCCAAGGGG CTGAGTTATC TACTGAGGCA GGTGATGGAC 44627 | |||||||| || || ||| ||||| |||| || ||| | ||| | | || | || |||| TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 420 CACTATTTCC GGCAGAACAA CTAACAAGAA TGCCTCTTTG TGTTGTACTG TACGCCCCGA 44687 | ||||| || | || | || |||| || | ||||||| ||||| |||| |||| ||||| CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 480 GAGCAATAGT TTCATCATAA AGAGGGCTCA GAGATCCACC AAGGGAGATT GAAAGAATAT 44747 |||||||| ||||||| | ||| | | |||||| |||||||||| |||||||||| GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 540 CTACTCCATC ATCTATAGCT GCATCCATGG CAGCTAAA 44785 |||| ||||| |||||||||| |||| |||| |||||||| CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA 578 hqPGS_C08HBa0165B06.1+_SGN-E286017- (44208 44785) ******************************************************************************** EST sequence 301 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 43556 to 45424): Exon 1 44220 44797 ( 578 n); cDNA 1 578 ( 578 n); score: 0.882 MATCH C08HBa0165B06.1+ SGN-E244401- 0.882 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E244401- (44220 44797) Alignment (genomic DNA sequence = upper lines): AAACAACCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTGACACCA TATTGTGATG 44279 ||| | |||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 60 GGTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT TTATCAACAT 44339 |||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||| ||||| TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 120 TGGCAACACC GCCGAATGCT AAGCATAATA CTATCTTTCC TCTTATAGCA GGGTCAGTGA 44399 ||| || || ||| |||| | ||||||| |||||||||| ||||||| || ||| | ||| TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 180 GTGACCCTCG TCTGCAATAA GGTGTTTCGG ATGGATCTTT TGCATTTTTT GCAGCATCAA 44459 |||||||| | | |||||||| || ||||| | |||||||||| ||||| |||| |||||||||| GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 240 ATAGAGTGAA GAATGTTGCG TTTGAAGTCT TTGGATGATA AGCAGATTCT CCTTCAAATT 44519 |||||||||| |||||||| | || ||| ||| |||| |||| |||||||||| ||||| |||| ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 300 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 44579 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 360 CTGTAAGAAT CCAAGGGGCT GAGTTATCTA CTGAGGCAGG TGATGGACCA CTATTTCCGG 44639 |||||||||| |||||||||| | || | | |||||||| | | || || ||||| || | CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 420 CAGAACAACT AACAAGAATG CCTCTTTGTG TTGTACTGTA CGCCCCGAGA GCAATAGTTT 44699 |||||||||| |||| || |||||| | ||| |||||| ||||| ||| ||||||| | CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 480 CATCATAAAG AGGGCTCAGA GATCCACCAA GGGAGATTGA AAGAATATCT ACTCCATCAT 44759 ||||||| | || | | || |||||||||| ||| || || |||||||||| |||||||||| CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 540 CTATAGCTGC ATCCATGGCA GCTAAAATAT CACTGCCA 44797 ||||||||| |||||||||| |||||||||| ||||| || CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 578 hqPGS_C08HBa0165B06.1+_SGN-E244401- (44220 44797) ******************************************************************************** EST sequence 310 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 43232 to 45424): Exon 1 44238 44797 ( 560 n); cDNA 1 560 ( 560 n); score: 0.880 MATCH C08HBa0165B06.1+ SGN-E244422- 0.880 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E244422- (44238 44797) Alignment (genomic DNA sequence = upper lines): GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC 44297 |||||||||| |||||||| | |||||||| | |||||||||| || |||||| |||||||||| GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 60 CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCAACA CCGCCGAATG 44357 |||||||||| |||||||||| ||| ||| || ||||| |||| | ||| || || ||| || CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 120 CTAAGCATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT CGTCTGCAAT 44417 ||| ||||| |||||||||| ||||||||| ||||| | | |||||||||| || |||||| CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 180 AAGGTGTTTC GGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 44477 |||| ||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 240 CGTTTGAAGT CTTTGGATGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA TTTCCAAGCT 44537 ||| ||| | || |||| || |||||||||| ||||||| || |||||||||| |||||||||| AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 300 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 44597 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 360 CTGAGTTATC TACTGAGGCA GGTGATGGAC CACTATTTCC GGCAGAACAA CTAACAAGAA 44657 ||| || | ||||||||| | | || | | ||||| || ||||||||| || |||| || CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 420 TGCCTCTTTG TGTTGTACTG TACGCCCCGA GAGCAATAGT TTCATCATAA AGAGGGCTCA 44717 |||||| |||| |||| || ||||| | ||||||||| |||||||| | || | | CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 480 GAGATCCACC AAGGGAGATT GAAAGAATAT CTACTCCATC ATCTATAGCT GCATCCATGG 44777 |||||||||| || ||| || |||||||||| |||||||||| |||||||||| | |||||||| GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 540 CAGCTAAAAT ATCACTGCCA 44797 |||||||||| ||||||| || CAGCTAAAAT ATCACTGTCA 560 hqPGS_C08HBa0165B06.1+_SGN-E244422- (44238 44797) ******************************************************************************** EST sequence 398 -strand 435 n (File: SGN-E208810-) 1 CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 61 GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 121 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 181 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 241 GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 301 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 361 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 421 CCGAGAGCAA TACTT Predicted gene structure (within gDNA segment 43657 to 45325): Exon 1 44267 44698 ( 432 n); cDNA 1 435 ( 435 n); score: 0.925 MATCH C08HBa0165B06.1+ SGN-E208810- 0.925 432 0.993 C PGS_C08HBa0165B06.1+_SGN-E208810- (44267 44698) Alignment (genomic DNA sequence = upper lines): CCATATTGTG ATGGGTTGAT GACAATCATG -CCAACACCT CCAGCATCCT TCACA-GCTT 44324 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| | ||| | || CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 60 GTCCTTTATC AACATTGGCA ACACCGCCGA AT-GCTAAGC ATAATACTAT CTTTCCTCTT 44383 |||||||||| ||||||||| |||||||||| || ||||| | |||||||||| ||||||| || GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 120 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGTG TTTCGGATGG ATCTTTTGCA 44443 |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| |||||||||| ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 180 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGCGTTTG AAGTCTTTGG ATGATAAGCA 44503 |||||||||| |||||||||| |||||||||| |||| ||| | || ||||||| | |||||||| TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 240 GATTCTCCTT CAAATTCCTC TCCATTTCCA AGCTTAACAG TAGCTTTTAT CTTTCTATCA 44563 |||| ||||| |||||||||| ||||||||| |||||| ||| |||||||||| |||||||||| GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 300 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTACTGA GGCAGGTGAT 44623 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||| || AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 360 GGACCACTAT TTCCGGCAGA ACAACTAACA AGAATGCCTC TTTGTGTTGT ACTGTACGCC 44683 |||||| ||| | || || || ||||||||| |||||||||| ||||||||| |||||||||| GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 420 CCGAGAGCAA TAGTT 44698 |||||||||| || || CCGAGAGCAA TACTT 435 hqPGS_C08HBa0165B06.1+_SGN-E208810- (44267 44698) ******************************************************************************** EST sequence 259 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 43831 to 45508): Exon 1 44441 44908 ( 468 n); cDNA 1 465 ( 465 n); score: 0.923 MATCH C08HBa0165B06.1+ SGN-E202140- 0.923 468 1.006 C PGS_C08HBa0165B06.1+_SGN-E202140- (44441 44908) Alignment (genomic DNA sequence = upper lines): GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGCGT TTGAAGTCTT TGGATGATAA 44500 |||||||||| |||||||||| |||||||||| ||||||| || | ||| |||| |||| ||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCAAGCTTAA CAGTAGCTTT TATCTTTCTA 44560 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGT 44620 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 GATGGACCAC TATTTCCGGC AGAACAACTA ACAAGAATGC CTCTTTGTGT TGTACTGTAC 44680 || |||||| |||| || || || |||||| |||||||||| |||||||||| || ||||||| GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCGAGAG CAATAGTTTC ATCATAAAGA GGGCTCAGAG ATCCACCAAG GGAGATTGAA 44740 |||||||||| ||||| |||| |||||||||| || ||||||| ||||||||| ||| || ||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 300 AGAATATCTA CTCCATCATC TATAGCTGCA TCCATGGCAG CTAAAATATC ACTGCCAGGA 44800 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||| || || AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCA-GA 359 CACTTTCCAT CGAAACCACA TACCTTATAT ATGGCTATAT GGGCAAGAGG AGCAACACCA 44860 || ||| | | ||| ||||||||| |||||||||| |||||||||| |||||||||| -AC-AACCAA CAGAGTTACA CACCTTATAT ATGGCTATAT GGGCAAGAGG AGCAACACCA 417 ACTGCAGTTC CATTAGCATT GCCATGTACA TTAGCACCTT TCACAAAA 44908 |||||||||| |||||||||| ||| |||| |||||||||| |||||||| ACTGCAGTTC CATTAGCATT TTCATATACA TTAGCACCTT TCACAAAA 465 hqPGS_C08HBa0165B06.1+_SGN-E202140- (44441 44908) ******************************************************************************** EST sequence 187 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 42181 to 48300): Exon 1 44762 45537 ( 776 n); cDNA 1 776 ( 776 n); score: 0.883 MATCH C08HBa0165B06.1+ SGN-E539488- 0.883 776 0.996 C PGS_C08HBa0165B06.1+_SGN-E539488- (44762 45537) Alignment (genomic DNA sequence = upper lines): ATAGCTGCAT CCATGGCAGC TAAAATATCA CTGCCAGGAC ACTTTCCATC GAAACCACAT 44821 |||||||||| |||||||||| ||||||||| ||| ||| || | ||||| ||| |||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA TGGCTATATG GGCAAGAGGA GCAACACCAA CTGCAGTTCC ATTAGCATTG 44881 |||||||||| ||||| || ||| ||||| |||||||||| | ||||| || ||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCATGTACAT TAGCACCTTT CACAAAAGCC CCCGCAGCTG TGCTTGCTGT GTGTGTACCA 44941 ||| || || |||||||||| |||||| || || ||||||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCATCAT TATCTATCGG GGAAGCATTG CCAAGTTCGT AAGACCTGGC TCCAATGAGC 45001 ||||||| || ||||||||| |||| ||||| ||||||| | |||||||||| |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGTTGGT GAAATTGGAC TTACAAACTC CTTTCCACTT AGCTGGCGGG 45061 |||||||||| |||| |||| |||||||||| | |||||||| |||||||||| ||| |||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GAAGGCATCC CAACGTCGCT AAAAGAAGGA TGGTCAGGAA TAATTCCAGT GTCTAGAACT 45121 | |||||||| |||| || || ||| |||||| || ||||||| ||||||||| |||||||||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CGCCTTTCCC ATAGTTGGAA TCCTTCCATA CACCCTTGTT CTGCTGCAAA 45181 |||||||||| | ||| || | | |||||| || ||||| | ||| |||| ||| |||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTGTGC AAGGACAAAA TCCTCTGTTT CTGAGCAGAG 45241 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTTCTG CAGTTAATCT TGCTGCAAAC 45301 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCCGTCATCA CATTGTGATA GGAATAGATA ATGCTGGCTG CCTCTTCATT TCCACTCGAA 45361 || |||||| ||||||| || ||| ||||| ||||| || | ||||||||| ||||||||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGCGG ACATAGTTTC AGGCAAAAAG GAAAGGTAAT AGCTCTCTAA ATCCATGAAC 45421 |||||||||| |||||| ||||||||| |||||||||| |||||||||| |||| | || CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GACGATTGAG TAGTAATTAG GCTTTCAGGG GATTCAACAT GGACTATATA AGTTTCGAAA 45481 || ||||||| ||| |||| | | ||||||| |||||||||| |||||||||| ||| |||| | GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TCACTCTGAA TAGTAGGCCA TGGGAAAGAA CAAAAGATGA AAACAAAAAA GATTTT 45537 |||||||||| || |||||| | ||||||| ||||| |||| | | || || ||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTT 776 hqPGS_C08HBa0165B06.1+_SGN-E539488- (44762 45537) ******************************************************************************** EST sequence 329 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 38697 to 46610): Exon 1 45027 45554 ( 528 n); cDNA 1 528 ( 528 n); score: 0.917 MATCH C08HBa0165B06.1+ SGN-E207645- 0.917 528 0.957 C PGS_C08HBa0165B06.1+_SGN-E207645- (45027 45554) Alignment (genomic DNA sequence = upper lines): TGGACTTACA AACTCCTTTC CACTTAGCTG GCGGGGAAGG CATCCCAACG TCGCTAAAAG 45086 ||| || ||| |||||||||| |||||||| | |||||| ||| ||||||||| |||||||| | TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGGTC AGGAATAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TTCCCATAGT 45146 ||||||| || ||||| |||| |||||||||| |||||||||| |||||||||| | ||| | | AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCCTT CCATACACCC TTGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 45206 ||||||| || ||| | ||| ||||||||| |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TGTGCAAGGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 45266 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCCGT CATCACATTG TGATAGGAAT 45326 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| ||||| |||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATAATGCT GGCTGCCTCT TCATTTCCAC TCGAACTAAT TGCGGACATA GTTTCAGGCA 45386 |||| || | || |||||| |||||||||| | || ||||| ||||| || |||| ||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAGGAAAG GTAATAGCTC TCTAAATCCA TGAACGACGA TTGAGTAGTA ATTAGGCTTT 45446 |||| ||||| ||||||||| |||||||||| | ||||| || ||||| |||| |||||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CAGGGGATTC AACATGGACT ATATAAGTTT CGAAATCACT CTGAATAGTA GGCCATGGGA 45506 |||||||||| ||||||||| |||||||| | ||| || ||| |||||||||| |||||||||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAACAAAA GATGAAAACA AAAAAGATTT TGAGGAATCC CATGGCTG 45554 | |||||||| |||||||||| |||| ||||| | | |||||| |||||||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTG 528 hqPGS_C08HBa0165B06.1+_SGN-E207645- (45027 45554) ******************************************************************************** EST sequence 407 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 44057 to 46762): Exon 1 45036 45553 ( 518 n); cDNA 1 518 ( 518 n); score: 0.929 MATCH C08HBa0165B06.1+ SGN-E330205- 0.929 518 0.972 C PGS_C08HBa0165B06.1+_SGN-E330205- (45036 45553) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCT GGCGGGGAAG GCATCCCAAC GTCGCTAAAA GAAGGATGGT 45095 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAATAAT TCCAGTGTCT AGAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 45155 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCATACACC CTTGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAGG 45215 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 45275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTTCTGCAGT TAATCTTGCT GCAAACCCCG TCATCACATT GTGATAGGAA TAGATAATGC 45335 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ||||| ||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TGGCTGCCTC TTCATTTCCA CTCGAACTAA TTGCGGACAT AGTTTCAGGC AAAAAGGAAA 45395 | || ||||| |||||||||| |||||||||| ||| || ||||| |||| ||||| |||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT CTCTAAATCC ATGAACGACG ATTGAGTAGT AATTAGGCTT TCAGGGGATT 45455 |||||||||| |||||||| | ||| | | |||||||||| || ||||||| |||||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC TATATAAGTT TCGAAATCAC TCTGAATAGT AGGCCATGGG AAAGAACAAA 45515 |||||||||| |||||||| |||| || || |||||||||| ||||||| || |||||||| | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAAAAAGATT TTGAGGAATC CCATGGCT 45553 |||||||||| || | |||| || | |||| |||||||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCT 518 hqPGS_C08HBa0165B06.1+_SGN-E330205- (45036 45553) ******************************************************************************** EST sequence 348 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 44485 to 46712): Exon 1 45095 45553 ( 459 n); cDNA 1 459 ( 459 n); score: 0.928 MATCH C08HBa0165B06.1+ SGN-E207387- 0.928 459 0.979 C PGS_C08HBa0165B06.1+_SGN-E207387- (45095 45553) Alignment (genomic DNA sequence = upper lines): TCAGGAATAA TTCCAGTGTC TAGAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 45154 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCATACAC CCTTGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAG 45214 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| ||||||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 45274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTTCTGCAG TTAATCTTGC TGCAAACCCC GTCATCACAT TGTGATAGGA ATAGATAATG 45334 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||| ||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 CTGGCTGCCT CTTCATTTCC ACTCGAACTA ATTGCGGACA TAGTTTCAGG CAAAAAGGAA 45394 | || |||| |||||||||| |||||||||| |||| || ||||| ||| |||||| ||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TCTCTAAATC CATGAACGAC GATTGAGTAG TAATTAGGCT TTCAGGGGAT 45454 |||||||||| | ||||||| | | ||| | |||||||||| ||| |||||| |||||||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CTATATAAGT TTCGAAATCA CTCTGAATAG TAGGCCATGG GAAAGAACAA 45514 |||||||||| | |||||||| |||| || | |||||||||| |||||||| | ||||||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAAAAAGAT TTTGAGGAAT CCCATGGCT 45553 |||||||||| ||| || ||| ||| | ||| ||||||||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCT 459 hqPGS_C08HBa0165B06.1+_SGN-E207387- (45095 45553) ******************************************************************************** EST sequence 147 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 44473 to 48290): Exon 1 45103 45537 ( 435 n); cDNA 3 437 ( 435 n); score: 0.885 MATCH C08HBa0165B06.1+ SGN-E282403- 0.885 435 0.991 C PGS_C08HBa0165B06.1+_SGN-E282403- (45103 45537) Alignment (genomic DNA sequence = upper lines): AATTCCAGTG TCTAGAACTC CGATGATCAC GCCTTTCCCA TAGTTGGAAT CCTTCCATAC 45162 |||||||||| |||||||||| |||||||||| ||| ||| | ||||||| | ||||| | AATTCCAGTG TCTAGAACTC CGATGATCAC ACCTACTCCA AAATTGGAAT CTTTCCACAA 62 ACCCTTGTTC TGCTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTGTGCA AGGACAAAAT 45222 ||| ||||| || ||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| GCCCATGTTC TGTTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTATGCA AGGAGAAAAT 122 CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTTCTGC 45282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTGCTGC 182 AGTTAATCTT GCTGCAAACC CCGTCATCAC ATTGTGATAG GAATAGATAA TGCTGGCTGC 45342 |||||||||| |||||||| | | ||||||| |||||| ||| || ||||| | |||| || || AGTTAATCTT GCTGCAAAAC CTTTCATCAC ATTGTGGTAG GAGTAGATCA TGCTAGCAGC 242 CTCTTCATTT CCACTCGAAC TAATTGCGGA CATAGTTTCA GGCAAAAAGG AAAGGTAATA 45402 |||||||| | |||||||| | ||||||||| |||||| | |||||||| | |||||||||| CTCTTCATCT CCACTCGAGC TAATTGCGGT AGTAGTTTTA GGCAAAAAAG AAAGGTAATA 302 GCTCTCTAAA TCCATGAACG ACGATTGAGT AGTAATTAGG CTTTCAGGGG ATTCAACATG 45462 |||||||||| ||| | || | | |||||||| || |||| || ||||||| | |||||||||| GCTCTCTAAA TCCGTTAATG ATGATTGAGT AGAAATTTGG TTTTCAGGTG ATTCAACATG 362 GACTATATAA GTTTCGAAAT CACTCTGAAT AGTAGGCCAT GGGAAAGAAC AAAAGATGAA 45522 |||||||||| || |||| || |||||||||| | |||||| | ||||||| | |||| ||||| GACTATATAA GTCTCGAGAT CACTCTGAAT ACTAGGCCTT AGGAAAGAGC AAAATATGAA 422 AACAAAAAAG ATTTT 45537 | || || ||||| GATAAGAAGA ATTTT 437 hqPGS_C08HBa0165B06.1+_SGN-E282403- (45103 45537) ******************************************************************************** EST sequence 11 +strand 514 n (File: SGN-E550939+) 1 TCAAAACATA ATTTTCTCTG AAGGTTCTCG CGCGTTCAAA ATAATTGATC TTGGTGCTGC 61 AGCAGATTTG AGAGTAGGAA TCAATTATAT TCCTAAGGAG TTTCTTTTAG ATCCAAGATA 121 CGCTGCACCA GAGCAATACA TTATGAGCAC ACAAACCCCT TCCGCACCGT CTGCTCCAGT 181 TGCAACTGCA CTGTCCCCAG TACTCTGGCA GCTGAATCTC CCAGATCGAT TTGACATCTA 241 CAGTGTCGGT CTCATATTCC TGCAAATGGC ATTCCCAGGA TTACGCAGTG ACAACAGTCT 301 CATTCAATTC AACCGACAAC TGAAGAGATG CGACTATGAT TTAGTTTCGT GGAGACAGAG 361 TGTAGAGCCT CGTGCTGGCC CTGAACTTAG GAAAGGCTTC GAGTTGTTAG ATTTGGATGG 421 TGGAATAGGG TGGGAGCTAT TAACATCTAT GGTACGTTTC AAAGCACGCC AAAGAATTAG 481 TGCAAAGACA GCTTTAGCAC ATCCATACTT TGAT Predicted gene structure (within gDNA segment 50424 to 55981): Exon 1 51306 51401 ( 96 n); cDNA 22 117 ( 96 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E550939+ 0.927 96 0.187 C PGS_C08HBa0165B06.1+_SGN-E550939+ (51306 51401) Alignment (genomic DNA sequence = upper lines): AGGTTGTTGC GCGTTCAAAA TAATTGAACT TGGTGCTGCA ACAGATTTGA GAGTAGGAAT 51365 ||||| | || |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| AGGTTCTCGC GCGTTCAAAA TAATTGATCT TGGTGCTGCA GCAGATTTGA GAGTAGGAAT 81 CAATTATATT CCAACGGAAT TTCTTTTAGA TCCAAG 51401 |||||||||| || | ||| | |||||||||| |||||| CAATTATATT CCTAAGGAGT TTCTTTTAGA TCCAAG 117 hqPGS_C08HBa0165B06.1+_SGN-E550939+ (51306 51401) ******************************************************************************** EST sequence 52 +strand 587 n (File: SGN-E255032+) 1 CAAAACATAA TTTTCTCTGA AGGTTCTCGC GCGTTCAAAA TAATTGATCT TGGTGCTGCA 61 GCAGATTTGA GAGTAGGAAT CAATTATATT CCTAAGGAGT TTCTTTTAGA TCCAAGATAC 121 GCTGCACCAG AGCAATACAT TATGAGCACA CAAACCCCTT CCGCACCGTC TGCTCCAGTT 181 GCAACTGCAC TGTCCCCAGT ACTCTGGCAG CTGAATCTCC CAGATCGATT TGACATCTAC 241 AGTGTCGGTC TCATATTCCT GCAAATGGCA TTCCCAGGAT TACGCAGTGA CAACAGTCTC 301 ATTCAATTCA ACCGACAACT GAAGAGATGC GACTATGATT TAGTTTCGTG GAGACAGAGT 361 GTAGAGCCTC GTGCTGGCCC TGAACTTAGG AAAGGCTTCG AGTTGTTAGA TTTGGATGGT 421 GGAATAGGGT GGGAGCTATT AACATCTATG GTACGTTTCA AAGCACGCCA AAGAATTAGT 481 GCAAAGACAG CTTTAGCACA TCCATACTTT GATAGAGAAG GTCTTCTAGC CCTGTCCTTC 541 ATTCAGAACC TAAAGCTGCA ATTCTTGCGG GCAACACAAC AAGACTA Predicted gene structure (within gDNA segment 50434 to 56721): Exon 1 51306 51401 ( 96 n); cDNA 21 116 ( 96 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E255032+ 0.927 96 0.164 C PGS_C08HBa0165B06.1+_SGN-E255032+ (51306 51401) Alignment (genomic DNA sequence = upper lines): AGGTTGTTGC GCGTTCAAAA TAATTGAACT TGGTGCTGCA ACAGATTTGA GAGTAGGAAT 51365 ||||| | || |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| AGGTTCTCGC GCGTTCAAAA TAATTGATCT TGGTGCTGCA GCAGATTTGA GAGTAGGAAT 80 CAATTATATT CCAACGGAAT TTCTTTTAGA TCCAAG 51401 |||||||||| || | ||| | |||||||||| |||||| CAATTATATT CCTAAGGAGT TTCTTTTAGA TCCAAG 116 hqPGS_C08HBa0165B06.1+_SGN-E255032+ (51306 51401) ******************************************************************************** EST sequence 56 +strand 388 n (File: SGN-E309959+) 1 CAGGGATAGT ACATAGAGAT ATTAAGCCTC AAAACATAAT TTTCTCTGAA GGTTCTCGCG 61 CGTTCAAAAT AATTGATCTT GGTGCTGCAG CAGATTTGAG AGTAGGAATC AATTATATTC 121 CTAAGGAGTT TCTTTTAGAT CCAAGATACG CTGCACCAGA GCAATACATT ATGAGCACAC 181 AAACCCCTTC CGCACCGTCT GCTCCAGTTG CAACTGCACT GTCCCCAGTA CTCTGGCAGC 241 TGAATCTCCC AGATCGATTT GACATCTACA GTGTCGGTCT CATATTCCTG CAAATGGCAT 301 TCCCAGGATT ACGCAGTGAC AACAGTCTCA TTCAATTCAA CCGACAACTG AAGAGATGCG 361 ACTATGATTT AGTTTCGTGG AGACAGAG Predicted gene structure (within gDNA segment 50144 to 54441): Exon 1 51306 51401 ( 96 n); cDNA 50 145 ( 96 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E309959+ 0.927 96 0.247 C PGS_C08HBa0165B06.1+_SGN-E309959+ (51306 51401) Alignment (genomic DNA sequence = upper lines): AGGTTGTTGC GCGTTCAAAA TAATTGAACT TGGTGCTGCA ACAGATTTGA GAGTAGGAAT 51365 ||||| | || |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| AGGTTCTCGC GCGTTCAAAA TAATTGATCT TGGTGCTGCA GCAGATTTGA GAGTAGGAAT 109 CAATTATATT CCAACGGAAT TTCTTTTAGA TCCAAG 51401 |||||||||| || | ||| | |||||||||| |||||| CAATTATATT CCTAAGGAGT TTCTTTTAGA TCCAAG 145 hqPGS_C08HBa0165B06.1+_SGN-E309959+ (51306 51401) ******************************************************************************** EST sequence 124 +strand 570 n (File: SGN-E259840+) 1 AAAACATAAT TTTCTCTGAA GGTTCTCGCG CGTTCAAAAT AATTGATCTT GGTGCTGCAG 61 CAGATTTGAG AGTAGGAATC AATTATATTC CTAAGGAGTT TCTTTTAGAT CCAAGATACG 121 CTGCACCAGA GCAATACATT ATGAGCACAC AAACCCCTTC CGCACCGTCT GCTCCAGTTG 181 CAACTGCACT GTCCCCAGTA CTCTGGCAGC TGAATCTCCC AGATCGATTT GACATCTACA 241 GTGTCGGTCT CATATTCCTG CAAATGGCAT TCCCAGGATT ACGCAGTGAC AACAGTCTCA 301 TTCAATTCAA CCGACAACTG AAGAGATGCG ACTATGATTT AGTTTCGTGG AGACAGAGTG 361 TAGAGCCTCG TGCTGGCCCT GAACTTAGGA AAGGCTTCGA GTTGCTAGAT TTGGATGGTG 421 GAATAGGGTG GGAGCTATTA ACATCTATGG TACGTTTCAA AGCACGCCAA AGAATTAGTG 481 CAAAGACAGC TTTACCACAT CCATACTTTG ATAGAGAAGG TCTTCTAGCC CCGGCCTTCA 541 TTCAGAAACT AAAGCTGCAA TTCTTGCGGG Predicted gene structure (within gDNA segment 50444 to 57161): Exon 1 51306 51401 ( 96 n); cDNA 20 115 ( 96 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E259840+ 0.927 96 0.168 C PGS_C08HBa0165B06.1+_SGN-E259840+ (51306 51401) Alignment (genomic DNA sequence = upper lines): AGGTTGTTGC GCGTTCAAAA TAATTGAACT TGGTGCTGCA ACAGATTTGA GAGTAGGAAT 51365 ||||| | || |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| AGGTTCTCGC GCGTTCAAAA TAATTGATCT TGGTGCTGCA GCAGATTTGA GAGTAGGAAT 79 CAATTATATT CCAACGGAAT TTCTTTTAGA TCCAAG 51401 |||||||||| || | ||| | |||||||||| |||||| CAATTATATT CCTAAGGAGT TTCTTTTAGA TCCAAG 115 hqPGS_C08HBa0165B06.1+_SGN-E259840+ (51306 51401) ******************************************************************************** EST sequence 292 +strand 624 n (File: SGN-E542827+) 1 TTTTCTTTTT TTTTGGTTAA TGACTAATTT ATAATTATTA TTTTGATAAT CAAATTTATT 61 TATATTTCAC TAATATTCTT GTAAAACTTA TTGTAGATGA CCAAAATTTT TCTTTGAATA 121 CCAAATTAAA TTACAATACA CACAAAAAAA ATAGTTTAGT TTTTTTTCTC TTTAAACTAA 181 GGAATGAAAG AAAAAAAATT AGAATAACAA ACTCAAATAA TTATAATAAA AGAAGTCAAA 241 CAATAATTTA TGTATAAAAA AAATTAAATA TAACCTCGAA CTTTGATAGA AGAATAATAT 301 ATACCTTTAA ATAATTTTTT TAAAAACAAT CAAAAGTAAT AAATATAAAT TTAAAATTAA 361 TTTTTTAATA TATATTAGCC ATTTTGTAAC GACAGTGCTG CAAATGACAA AATTGAGAAA 421 TATATCAAAC TTTTTCCGTA AAATAGATAA ACTTAAAAGA GGATATTTGT AAACAACACA 481 AAATCTTCAA TCAAATACAA AGTTCAAACA CTAGCAGTGA ACCAAATCAT CGAAAAGTTA 541 TAAAATTGTT AGAAATTTCT ACCATATATT GGATGAAAAC ATTGAAATTT CCTGGAATTT 601 TGAACTTTAG GTTGCTGGTT TTGG Predicted gene structure (within gDNA segment 56313 to 50458): Exon 1 55552 55185 ( 368 n); cDNA 1 365 ( 365 n); score: 0.891 Intron 1 55184 55137 ( 48 n); Pd: 0.000 (s: 0.90), Pa: 0.979 (s: 0) Exon 2 55136 55104 ( 33 n); cDNA 366 397 ( 32 n); score: 0.667 Intron 2 55103 55066 ( 38 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.84) Exon 3 55065 55023 ( 43 n); cDNA 398 439 ( 42 n); score: 0.837 Intron 3 55022 53676 (1347 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0) Exon 4 53675 53641 ( 35 n); cDNA 440 472 ( 33 n); score: 0.743 Intron 4 53640 53391 ( 250 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 5 53390 53367 ( 24 n); cDNA 473 495 ( 23 n); score: 0.667 Intron 5 53366 51341 (2026 n); Pd: 0.900 (s: 0), Pa: 0.950 (s: 0) Exon 6 51340 51330 ( 11 n); cDNA 496 506 ( 11 n); score: 0.818 MATCH C08HBa0165B06.1- SGN-E542827+ 0.891 514 0.824 C PGS_C08HBa0165B06.1-_SGN-E542827+ (55552 55185,55136 55104,55065 55023,53675 53641,53390 53367,51340 51330) Alignment (genomic DNA sequence = upper lines): TTTGACTTTT TTTTGTTTCA ATGACTAATT TATAATTATT CTTTTGATAA TCAAATTTAT 55493 ||| |||| ||||| || | |||||||||| |||||||||| ||||||||| |||||||||| TTTTCTTTTT TTTTGGTT-A ATGACTAATT TATAATTATT ATTTTGATAA TCAAATTTAT 59 TTATGTTTCA TTAATATTCT TGTAAAACTT ATTGTAGATG ACCAAATTTT TTCTTCGAAT 55433 |||| ||||| ||||||||| |||||||||| |||||||||| |||||| ||| ||||| |||| TTATATTTCA CTAATATTCT TGTAAAACTT ATTGTAGATG ACCAAAATTT TTCTTTGAAT 119 ACGAAATTAA ATTACAAAAC ACACAAAAAA AATAGTTTAA TTTTTTAT-T CTTTAAACTA 55374 || ||||||| ||||||| || |||||||||| ||||||||| |||||| | | |||||||||| ACCAAATTAA ATTACAATAC ACACAAAAAA AATAGTTTAG TTTTTTTTCT CTTTAAACTA 179 AGGAATGAAA GAAAAAGCAA AATAAGAATA AGAAATTCAA ATAATTATAA TAAAAGAAGT 55314 |||||||||| | |||| || ||| |||||| | ||| |||| |||||||||| |||||||||| AGGAATGAAA G-AAAA--AA AATTAGAATA ACAAACTCAA ATAATTATAA TAAAAGAAGT 236 CAAAAAATAA TTTATGTATG AAAAAAATTA AA-ATATACT TTGAACTTTG ATAGAAGAAT 55255 |||| ||||| ||||||||| |||||||||| || ||| || | |||||||| |||||||||| CAAACAATAA TTTATGTATA AAAAAAATTA AATATA-ACC TCGAACTTTG ATAGAAGAAT 295 CATATATACC CCTAAATTTT TTTTTAAAAA AAAATTAGAA GTAATAAATA TAAATTTAAA 55195 ||||||||| ||||| | ||||| |||| | ||| | || |||||||||| |||||||||| AATATATACC TTTAAATAAT TTTTTTAAAA ACAATCAAAA GTAATAAATA TAAATTTAAA 355 ACTAATTTTT TTAAATTCGT TAAATGAAGG GTATATGTGA GCCATTTCGT AATGGCAGGG 55135 | |||||||| ATTAATTTTT .......... .......... .......... .......... ........TA 367 GTATATGTGA GCCATTTGTA TAACGGTATG GGCATATATG AGCCACTTTT ATAACGAGGG 55075 ||||| | | ||||||| | ||||| | | ATATATATTA GCCATTT-TG TAACGACAGT G......... .......... .......... 397 GTATATCAGC TCCAAATGAC AAAGTTGAGA GGTATATCAG ACCTTTTTCC CTTATTTCTA 55015 | | |||||||| ||| |||||| ||||||| | |||||||| | .........C TGCAAATGAC AAAATTGAGA AATATATCA- AACTTTTTCC GT........ 439 AAATGAAAGT CTAGAGTTCG CTTGAATTGA CTTAAAAGTT GATCAAATCT ACTTTTAAAG 54955 .......... .......... .......... .......... .......... .......... 439 TCCTGTTTTA TTTTTTATTT TTGAGAGTTT TGACAAAGCA GAAAATAACT TATAATAAGT 54895 .......... .......... .......... .......... .......... .......... 439 TAGAGATGAC TTTAAAAAAA AGTTAAAAAT TACAAGTAGC TACTTCCTTA CTTTTCATTT 54835 .......... .......... .......... .......... .......... .......... 439 TTTAACTTAA AAGTTACTAA AGTTTAACTT TTAAAAAAAT AAGGAAAAAA GTCTGAAATA 54775 .......... .......... .......... .......... .......... .......... 439 TATATCAACT TTGACCGAAA TTATATTAAC GATATCAAAC TTTGGAAATG ACCTTTTACC 54715 .......... .......... .......... .......... .......... .......... 439 CCTGTACTAT TTAATAGTGT ATTTTAAAGG TATATATGTA TCCACGTGAA CATCACAAAT 54655 .......... .......... .......... .......... .......... .......... 439 ATTCCATCAT TAAAAATAGA AAGTCATCAT AAAATTTGAT ATGTAACAAT AATTTCGACC 54595 .......... .......... .......... .......... .......... .......... 439 AAAATTGAGA TATTTTTCAG ACCCTTTTTT CAAAAAATAC TTTTTATGAC AAGAAAGTAC 54535 .......... .......... .......... .......... .......... .......... 439 CTGGGATGTT GAGTCGTTGA CGCTAAACTT ATTATTAATA TGACAAGAAA AAATAGTCCT 54475 .......... .......... .......... .......... .......... .......... 439 ATGAGTTTCC TGGAAAATAC ATTGTAATTA ATTCACATGG GCACTTTTTA TTTTTTTTTA 54415 .......... .......... .......... .......... .......... .......... 439 AACATATTGT GGCCAACTGA GAAATTATAG TTAGGATTTT AAATTGGATT TTTATTTCAT 54355 .......... .......... .......... .......... .......... .......... 439 ATATCCATTT AAAAATAATT CAATATACTC CATAACTATA ATTTGATAAT TACGATTTGT 54295 .......... .......... .......... .......... .......... .......... 439 AGCTATATAT AAGAGGGAGG AGAGAGGCGA GCGAGTGAGA TTGGGAGAGG GAGGAGAGAG 54235 .......... .......... .......... .......... .......... .......... 439 ACGAATTGTA TAGGTCTATC TATCGAACTG TATAAGTCTA TCTATTAAAT AATTATATAT 54175 .......... .......... .......... .......... .......... .......... 439 TTATAGCTGG TATACGCATG TACTTGTATA TCTGGTGAGC GAGATTGGGA GAGAGGCAAG 54115 .......... .......... .......... .......... .......... .......... 439 TGATAGAGGG TAGAGAGTGG AGAGAGACGA ACTGTATCTG TATAGCTGTC AGAGGCAGAG 54055 .......... .......... .......... .......... .......... .......... 439 AATGGAGAGA GACTAACTGT ATTTGTATAA TTGTAATTAT TGTATATATA TATATATATA 53995 .......... .......... .......... .......... .......... .......... 439 TATATATATA CTAGTTTTCG AAACGTGCGT TGCACGTTTG CCTTATACAA TTATTATAAA 53935 .......... .......... .......... .......... .......... .......... 439 GTTGAATTAT TATATAATGT TGAAATTAGA AATATTAGTT TTACCAATTT ATATTTTATT 53875 .......... .......... .......... .......... .......... .......... 439 TATTAAATAA AATTCATAAT AATCGAATAG TACATTGACC ATCAAACAAG AATTTTTTTA 53815 .......... .......... .......... .......... .......... .......... 439 AAAATAAATA TATTATTATA GCATCTAATA ATATGAATAT ATCTGTATAA CTTATTCTTA 53755 .......... .......... .......... .......... .......... .......... 439 ATAATCTCTC ATTACTCTCC ATATTAGTAA GTACACAAAT GTGTAGCTAC TTAAAGAAAC 53695 .......... .......... .......... .......... .......... .......... 439 TATATTAGTA AGGAAAGACA AAAGTAAATA AATATTATAA AAGTATATTT AAAAATGAAT 53635 | ||| || ||| || ||| || || |||||| || .......... .........A AAA-TAGATA AA-CTTAAAA GAGGATATTT GTAA...... 472 CTAAATGTCA TAAATTAGTA ATTTCAGCAC TAATAAAAAT AGCTTATAAC ATTCATAATT 53575 .......... .......... .......... .......... .......... .......... 472 TCATAGAAGA TTATATTAAA GAAGTATAAT CGGTAAAGAA TACAAAAAAA ATTAAACAAA 53515 .......... .......... .......... .......... .......... .......... 472 TAAGAATAAA TACAACATTT ATATCCTTCT TAAGACTTTT AATATAACAA TATATATAGT 53455 .......... .......... .......... .......... .......... .......... 472 AAAAGAAATA CACAAGGAGT AAAAAAATTT TCTCCCGTAA CAAAAAAAAA ACAATCTAAA 53395 .......... .......... .......... .......... .......... .......... 472 ATAGTAAAGA TAAAATTTAT GATTCAAAAT ATCATTCTAA TGAGGATCAA TAAATATTAA 53335 || | ||||| | | | ||||| ....ACAACA CAAAATCT-T CAATCAAA.. .......... .......... .......... 495 TATTTCAAAA CAAAAAAAAG TACCTGTAAA TTGCATAATA ATTCACATCA ACACGAGGCA 53275 .......... .......... .......... .......... .......... .......... 495 AATGGTAAAG AGCAATTATT TTTAAATGAT ACATATATAT AGCTAAAGAT TTATTGGATA 53215 .......... .......... .......... .......... .......... .......... 495 AGATGAAAAG GTGAAAAGTT GTTTAAGTTA ATTTTAGAAG TTGAATGATC TTACACATGC 53155 .......... .......... .......... .......... .......... .......... 495 GGTAGAGGAA AGGTGATTGT TTTTACTAAT AATTCAATAC ATTTAATTAT ACTAATTACA 53095 .......... .......... .......... .......... .......... .......... 495 GAGAGAGGAT AACAAATTTA ATCATTTAAC CACATTAATT ATAGAGAAAG AATTAATAAC 53035 .......... .......... .......... .......... .......... .......... 495 TTTTATTTAT TTTTTTTAAA AAGTAATTCC TAACAATTTT CTATGAAATA ATTTCTAACA 52975 .......... .......... .......... .......... .......... .......... 495 ATTTTCTATA AAATATTTTT GTCTTTCAAA GTTTGACTTT ACACCTTCTT AGTTTTAGTA 52915 .......... .......... .......... .......... .......... .......... 495 TAATATAATT ATTACTTAGT ATGTAAATAA TTAGAATTTA AACTATTGTG TCTAGATGCA 52855 .......... .......... .......... .......... .......... .......... 495 TGTATTTAAA TATGATTATA TAATATTAAA TTAATTATAT ATTAATATTT AATTTAATTT 52795 .......... .......... .......... .......... .......... .......... 495 AGGGATAAAA TAAGGACAAA ATGGTAATTC AACTTTTAAG TTAAGAGCTT CCCACTTATA 52735 .......... .......... .......... .......... .......... .......... 495 ATAATAAGAG TATATGTTAT ATCATAAAAA AAATCATCTA GCAGACTAAG TACAAATATG 52675 .......... .......... .......... .......... .......... .......... 495 TCATAAATAT TTTCTTGGGA TAGCTTAATA TATAGAGGTT GTGAATATAA TCGAAGACAT 52615 .......... .......... .......... .......... .......... .......... 495 CTATAATCTT TTTCAACACA TCGCATTAGT ACCAATTTAT ACTCTATCAA TAGTTATTTC 52555 .......... .......... .......... .......... .......... .......... 495 TCCAAACTCA AAAGAGAATT AAAAAAAATT ATAAAAATAT TGAACCAATG ATTTCTATAA 52495 .......... .......... .......... .......... .......... .......... 495 TCTGGCCATG AACAAAATTA CACTAATAAC TTATCTTTTA AGTCTAGCAG GGCACTCTTA 52435 .......... .......... .......... .......... .......... .......... 495 TAATCAAAGG TTCTGATACC ATCATTCTGC TATCGAAAAA GAAAAGCATA TCAAAGAAAA 52375 .......... .......... .......... .......... .......... .......... 495 CATAAGAATT TTCAGAATGT TCATTGATGT ATTTTTTTTT TGTACCCACA AAATAAGAAT 52315 .......... .......... .......... .......... .......... .......... 495 ATGCAAAAAT GAAACAAAAA GAAAAGAAAT AATACATACT TACTGGAGTA TCTCCGATGA 52255 .......... .......... .......... .......... .......... .......... 495 ACATATGAAA TTAGGAAGAT GGTAGATTAG ATTTTTGAAT GATTAACATA GAATACACAC 52195 .......... .......... .......... .......... .......... .......... 495 AATATATTAT AGTAAATGAG ACTCTTTGTT TCCCTTGTCT GTTATGCCTT TTCAGTTGCA 52135 .......... .......... .......... .......... .......... .......... 495 TCATTTAAAT ATGTCTTCAT TATTATATGA TAGAATTACT GAAGGCTGAA ACTAATAATT 52075 .......... .......... .......... .......... .......... .......... 495 ATATATGGTA ATTAAGATAC TATAAATTAA AAGTTTTATA TTTAATATTA AAAAATAACT 52015 .......... .......... .......... .......... .......... .......... 495 CCAAGAAATT GAACAAATTA CAAAAAAAAA AATCTCATTA AAATATTTTT CTCACCTATT 51955 .......... .......... .......... .......... .......... .......... 495 AAAGCATCAA ATTAGAATTA AGGAAACATA AATCAACACA TATAAACAAA TTAACAATTA 51895 .......... .......... .......... .......... .......... .......... 495 ATTAATTTAT AAATAGTCTA AGAGATAAAC TTCAAAAAAT TTAAACTATT TAAAAAAAAT 51835 .......... .......... .......... .......... .......... .......... 495 AATAACAGGA AAACGTGTCT TTAAGATAAT TAAACTTTAT TATATACTAA TATTTTACTA 51775 .......... .......... .......... .......... .......... .......... 495 ATAACCAATT AGATGATTTT TACTATTTCA ATGCAAGGAC AAGGGTAAGA CTTTTCAAAT 51715 .......... .......... .......... .......... .......... .......... 495 TTAAAAATTA AGAGTAATTA AGTTAAAGAC TATAAAATAA TTAGCAATTT ATTTACTAAT 51655 .......... .......... .......... .......... .......... .......... 495 ATTTAGTTAC TTTGATTAAG ATTTAGTATA GGGGCAAAAT AGTAATTCAA CGTTTGCTTA 51595 .......... .......... .......... .......... .......... .......... 495 ACATTCTTCC CACTTATTCA CATTACATGT TTATTTTTGC ATGTCTGCTT AACGTCTGAA 51535 .......... .......... .......... .......... .......... .......... 495 GCAGGATCAG TAAGCAAATC ATAACTCTTG TAAATTTTAT TGCCTTTATT CTTCACTTCT 51475 .......... .......... .......... .......... .......... .......... 495 TTAGTAAGTG AAACATGTAC AATCTTACAC AAATTCGTGT TATTTACTTT CAAGTTGCAG 51415 .......... .......... .......... .......... .......... .......... 495 AGTAGGAAAT TACCTTGGAT CTAAAAGAAA TTCCGTTGGA ATATAATTGA TTCCTACTCT 51355 .......... .......... .......... .......... .......... .......... 495 CAAATCTGTT GCAGCACCAA GTTCA 51330 || || ||||| .......... ....TACAAA GTTCA 506 hqPGS_C08HBa0165B06.1-_SGN-E542827+ (55552 55185,55136 55104,55065 55023,53675 53641) ******************************************************************************** EST sequence 113 -strand 438 n (File: SGN-E232152-) 1 ATGTTGTTCC CATCCCAGGA GCCAAAAATG CTGAGCAGGC TAAAGAATTT GGTGGTGCGT 61 TGGGTTGAAC ACTAACCCAA CAAGAAATAG ACCAACTTCG TTCATTGGCA TCAGAATTAA 121 AACCTGTTAC TGGTTTCCCT GTCGAAAAGT TGTAAACATC ATTTTACATG TACATTAACA 181 AAGTCTTCGA AATGTAACTA GTACTAATAA AGCTGCTGCT GCTGCAACAT CGTAATCCGT 241 GCTCATAAGT GGAGTTTCGA GAAGGTGATA TATATATACT AGTTTTCGAA ACGTGCTTGC 301 ACGTTTGTCC CATACAATTA TTATAAAGTT GAATTATTAT ATAATATTGA AATTAGAAAT 361 ATTAGTTTTA CCTGTTTATA TTTTATTCAT TAAATAAAAT TCATAATAAT CGAATAGTAA 421 AAAAAAAAAA AAAAAAAA Predicted gene structure (within gDNA segment 57275 to 53053): Exon 1 54282 54265 ( 18 n); cDNA 252 268 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53826 ( 169 n); cDNA 269 436 ( 168 n); score: 0.899 MATCH C08HBa0165B06.1- SGN-E232152- 0.899 187 0.427 C PGS_C08HBa0165B06.1-_SGN-E232152- (54282 54265,53994 53826) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 268 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 268 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 268 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 268 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 280 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 339 TATAATGTTG AAATTAGAAA TATTAGTTTT ACCAATTTAT ATTTTATTTA TTAAATAAAA 53863 |||||| ||| |||||||||| |||||||||| ||| ||||| |||||||| | |||||||||| TATAATATTG AAATTAGAAA TATTAGTTTT ACCTGTTTAT ATTTTATTCA TTAAATAAAA 399 TTCATAATAA TCGAATAGTA CATTGACCAT CAAACAA 53826 |||||||||| |||||||||| | | | ||| || TTCATAATAA TCGAATAGTA AAAAAAAAAA AAAAAAA 436 hqPGS_C08HBa0165B06.1-_SGN-E232152- (53994 53826) ******************************************************************************** EST sequence 114 -strand 426 n (File: SGN-E232652-) 1 TCCCAGGAGC CAAAAATGCT GAGCAGGCTA AAGAATTTGG TGGTGCGTTG GGTTGGAGAC 61 TAACCCAACA AGAAATAGAC CAACTTCGTT CATTGGCATC AGAATTAAAA CCTGTTACTG 121 GTTTCCCTGT CGAAAAGTTG TAAACATCAT TTTACATGTA CATTAACAAA GTCTTCGAAA 181 TGTAACTAGT ACTAATAAAG CTGCTGCTGC TGCAACATCG TAATCCGTGC TCATAAGTGG 241 AGTTTCGAGA AGGTGATATA TATATACTAG TTTTCGAAAC GTGCTTGCAC GTTTGTCCCA 301 TACAATTATT ATAAAGTTGA ATTATTATAT AATATTGAAA TTAGAAATAT TAGTTTTACC 361 TGTTTATATT TTATTCATTA AATAAAATTC ATAATAATCG AATAGTAAAA AAAAAAAAAA 421 AAAAAA Predicted gene structure (within gDNA segment 57155 to 53053): Exon 1 54282 54265 ( 18 n); cDNA 240 256 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53826 ( 169 n); cDNA 257 424 ( 168 n); score: 0.899 MATCH C08HBa0165B06.1- SGN-E232652- 0.899 187 0.439 C PGS_C08HBa0165B06.1-_SGN-E232652- (54282 54265,53994 53826) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 256 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 256 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 256 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 256 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 268 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 327 TATAATGTTG AAATTAGAAA TATTAGTTTT ACCAATTTAT ATTTTATTTA TTAAATAAAA 53863 |||||| ||| |||||||||| |||||||||| ||| ||||| |||||||| | |||||||||| TATAATATTG AAATTAGAAA TATTAGTTTT ACCTGTTTAT ATTTTATTCA TTAAATAAAA 387 TTCATAATAA TCGAATAGTA CATTGACCAT CAAACAA 53826 |||||||||| |||||||||| | | | ||| || TTCATAATAA TCGAATAGTA AAAAAAAAAA AAAAAAA 424 hqPGS_C08HBa0165B06.1-_SGN-E232652- (53994 53826) ******************************************************************************** EST sequence 239 +strand 268 n (File: SGN-E540577+) 1 GAAACCTGTT ACTGGTTTCC CTGTCGAAAA GTTGTAAACA TCATTTTACA TGTACATTAA 61 CAAAGTCTTC GAAATGTAAC TAGTACTAAT AAAGCTGCTG CTGCTGCAAC ATCGTAATCC 121 GTGCTCATAA GTGGAGTTTC GAGAAGGTGA TATATATATA CTAGTTTTCG AAACGTGCTC 181 GCACGTTTGT CCCATACAAT TATTATAAAG TTGAATTATT ATATAATATT GAAATTAGAA 241 ATATTAGTTT TACCTGTTAA AAAAAAAA Predicted gene structure (within gDNA segment 56085 to 53140): Exon 1 54282 54265 ( 18 n); cDNA 134 150 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53890 ( 105 n); cDNA 151 254 ( 104 n); score: 0.943 PPA cDNA 259 268 MATCH C08HBa0165B06.1- SGN-E540577+ 0.943 123 0.459 C PGS_C08HBa0165B06.1-_SGN-E540577+ (54282 54265,53994 53890) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 150 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 150 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 150 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 150 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 162 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| | | |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TCG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 221 TATAATGTTG AAATTAGAAA TATTAGTTTT ACC 53890 |||||| ||| |||||||||| |||||||||| ||| TATAATATTG AAATTAGAAA TATTAGTTTT ACC 254 hqPGS_C08HBa0165B06.1-_SGN-E540577+ (53994 53890) ******************************************************************************** EST sequence 248 +strand 265 n (File: SGN-E291458+) 1 ACCTGTTACT GGTTTCCCTG TCGAAAAGGG GGAAACATCA TTTTACATGT ACATTAACAA 61 AGTCTTCGAA ATGTAACTAG TACTAATAAA GCTGCTGCTG CTGCAACATC GCAATCCGTG 121 CTCATAAGTG GAGTTTCGAG AAGGTGATAT ATATATACTA GTTTTCGAAA CGTGCTCGCA 181 CGTTTGTCCC ATACAATTAT TATAAAGATG AATTATTATA TAATATTGAA ATTAGAAATA 241 TTAGTTCTAC CTGTTAAAAA AAAAA Predicted gene structure (within gDNA segment 56055 to 53095): Exon 1 54282 54265 ( 18 n); cDNA 131 147 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53890 ( 105 n); cDNA 148 251 ( 104 n); score: 0.924 PPA cDNA 256 265 MATCH C08HBa0165B06.1- SGN-E291458+ 0.924 123 0.464 C PGS_C08HBa0165B06.1-_SGN-E291458+ (54282 54265,53994 53890) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 147 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 147 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 147 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 147 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 159 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| | | |||||||| | |||||||| ||||||||| |||||||||| AGTTTTCGAA ACGTGC-TCG CACGTTTGTC CCATACAATT ATTATAAAGA TGAATTATTA 218 TATAATGTTG AAATTAGAAA TATTAGTTTT ACC 53890 |||||| ||| |||||||||| |||||||| | ||| TATAATATTG AAATTAGAAA TATTAGTTCT ACC 251 hqPGS_C08HBa0165B06.1-_SGN-E291458+ (53994 53890) ******************************************************************************** EST sequence 46 -strand 291 n (File: SGN-E540574-) 1 GAAACCTGTT ACTGGTTTCC CTGTCGAAAA GTTGTAAACA TCATTTTACA TGTACATTAA 61 CAAAGTCTTC GAAATGTAAC TAGTACTAAT AAAGCTGCTG CTGCTGCAAC ATCGTAATCC 121 GTGCTCATAA GTGGAGTTTC GAGAAGGTGA TATATATATA CTAGTTTTCG AAACGTGCTC 181 GCACGTTTGT CCCATACAAT TATTATAAAG TTGAATTATT ATATAATATT GAAATTAGAA 241 ATATTAGTTT TACCTGTTAA AAAAAAAAAA AAAAAACTCG AGGGGGGCCC G Predicted gene structure (within gDNA segment 56095 to 52920): Exon 1 54282 54265 ( 18 n); cDNA 134 150 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53890 ( 105 n); cDNA 151 254 ( 104 n); score: 0.943 PPA cDNA 259 277 MATCH C08HBa0165B06.1- SGN-E540574- 0.943 123 0.423 C PGS_C08HBa0165B06.1-_SGN-E540574- (54282 54265,53994 53890) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 150 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 150 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 150 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 150 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 162 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| | | |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TCG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 221 TATAATGTTG AAATTAGAAA TATTAGTTTT ACC 53890 |||||| ||| |||||||||| |||||||||| ||| TATAATATTG AAATTAGAAA TATTAGTTTT ACC 254 hqPGS_C08HBa0165B06.1-_SGN-E540574- (53994 53890) ******************************************************************************** EST sequence 102 -strand 292 n (File: SGN-E229341-) 1 TCGTTCATTG GCATCAAAAT TACAACCTGT CACTGGTTTC CCTGTCAAAA AGTTGTAAAC 61 ATCATTTTAC ATGTACATTA GCAAAGTCTT CGAAATGTAA CTAGCACTAA TAAAGCTGCT 121 GCCGCTGCAA CATCGTAATC CGTGCTCATA AGTGGAGTTT CGAGAAGGTG ATATATATAT 181 ACTAGTTTTC GAAACGTGCT TGCACGTTTG TCCCATCCAA TTATTATAAA GTTGAATTAT 241 TATATAATAT TGAAATTAGA AATATTAGTT TTCGGAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 56727 to 53093): Exon 1 54282 54265 ( 18 n); cDNA 155 171 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53893 ( 102 n); cDNA 172 272 ( 101 n); score: 0.941 PPA cDNA 276 292 MATCH C08HBa0165B06.1- SGN-E229341- 0.941 120 0.411 C PGS_C08HBa0165B06.1-_SGN-E229341- (54282 54265,53994 53893) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 171 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 171 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 171 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 171 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 183 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | || ||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATCCAATT ATTATAAAGT TGAATTATTA 242 TATAATGTTG AAATTAGAAA TATTAGTTTT 53893 |||||| ||| |||||||||| |||||||||| TATAATATTG AAATTAGAAA TATTAGTTTT 272 hqPGS_C08HBa0165B06.1-_SGN-E229341- (53994 53893) ******************************************************************************** EST sequence 10 -strand 385 n (File: SGN-E234153-) 1 AATGTTGTTC CCATCCCAGG AGCCAAAAAT GCTGAGCAGG CTAAAGAATT TGGTGGTGCG 61 TTGGGTTGGA GACTAACCCA ACAAGAAATA GACCAACTTC GTTCATTGGC ATCAGAATTA 121 AAACCTGTTA CTGGTTTCCC TGTCGAAAAG TTGTAAACAT CATTTTACAT GTACATTAAC 181 AAAGTCTTCG AAATGTAACT AGTACTAATA AAGCTGCTGC TGCTGCAACA TCGTAATCCG 241 TGCTCATAAG TGGAGTTTCG AGAAGGTGAT ATATATATAC TAGTTTTCGA AACGTGCTTG 301 CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA TATAATATTG AAATTAGAAA 361 TATTAAAAAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 57285 to 53098): Exon 1 54282 54265 ( 18 n); cDNA 253 269 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53898 ( 97 n); cDNA 270 365 ( 96 n); score: 0.948 PPA cDNA 366 385 MATCH C08HBa0165B06.1- SGN-E234153- 0.948 115 0.299 C PGS_C08HBa0165B06.1-_SGN-E234153- (54282 54265,53994 53898) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 269 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 269 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 269 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 269 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 281 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 340 TATAATGTTG AAATTAGAAA TATTA 53898 |||||| ||| |||||||||| ||||| TATAATATTG AAATTAGAAA TATTA 365 hqPGS_C08HBa0165B06.1-_SGN-E234153- (53994 53898) ******************************************************************************** EST sequence 63 -strand 507 n (File: SGN-E287237-) 1 ACAGATCTAT ACTCCTGAAG TTCTTACCAA ATTGCAGCCA CTCATAAATA GAATAAAGGA 61 GATTGGAGAT AGCTACAATA AGACTTCAAC TCAGGTGGTC CTGAATTGGT TGATTGCACA 121 GGAGAATGTT GTTCCCATCC CAGGAGCCAA AAATGCTGAG CAGGCTAAAG AATTTGGTGG 181 TGCGTTGGGT TGGAGACTAA CCCAACAAGA AATAGACCAA CTTCGTTCAT TGGCATCAGA 241 ATTAAAACCT GTTACTGGTT TCCCTGTCGA AAAGTTGTAA ACATCATTTT ACATGTACAT 301 TAACAAAGTC TTCGAAATGT AACTAGTACT AATAAAGCTG CTGCTGCTGC AACATCGTAA 361 TCCGTGCTCA TAAGTGGAGT TTCGAGAAGG TGATATATAT ATACTAGTTT TCGAAACGTG 421 CTCGCACGTT TGTCCCATAC AATTATTATA AAGTTGAATT ATTATATAAT ATTGAAATTA 481 GAAATATTAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 58525 to 53118): Exon 1 54282 54265 ( 18 n); cDNA 377 393 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53898 ( 97 n); cDNA 394 489 ( 96 n); score: 0.938 PPA cDNA 490 507 MATCH C08HBa0165B06.1- SGN-E287237- 0.938 115 0.227 C PGS_C08HBa0165B06.1-_SGN-E287237- (54282 54265,53994 53898) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 393 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 393 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 393 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 393 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 405 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| | | |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TCG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 464 TATAATGTTG AAATTAGAAA TATTA 53898 |||||| ||| |||||||||| ||||| TATAATATTG AAATTAGAAA TATTA 489 hqPGS_C08HBa0165B06.1-_SGN-E287237- (53994 53898) ******************************************************************************** EST sequence 9 -strand 277 n (File: SGN-E234088-) 1 GCATCAGAAT TAAAACCTGT TACTGGTTTC CCTGTCGAAA AGTTGTAAAC ATCATTTTAC 61 ATGTACATTA ACAAAGTCTT CGAAATGTAA CTAGTACTAA TAAAGCTGCT GCTGCTGCAA 121 CATCGTAATC CGTGCTCATA AGTGGAGTTT CGAGAAGGTG ATATATATAT ACTAGTTTTC 181 GAAACGTGCT TGCACGTTTG TCCCATACAA TTATTATAAA GTTGAATTAT TATATAATAT 241 TGAAATTAGA AATATTCCAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 56205 to 53089): Exon 1 54282 54265 ( 18 n); cDNA 145 161 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53899 ( 96 n); cDNA 162 256 ( 95 n); score: 0.948 PPA cDNA 259 277 MATCH C08HBa0165B06.1- SGN-E234088- 0.948 114 0.412 C PGS_C08HBa0165B06.1-_SGN-E234088- (54282 54265,53994 53899) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 161 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 161 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 161 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 161 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 173 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 232 TATAATGTTG AAATTAGAAA TATT 53899 |||||| ||| |||||||||| |||| TATAATATTG AAATTAGAAA TATT 256 hqPGS_C08HBa0165B06.1-_SGN-E234088- (53994 53899) ******************************************************************************** EST sequence 116 -strand 160 n (File: SGN-E221650-) 1 GGCACGAGCT GCAACATCGT AATCCGTGCT CATAAGTGGA GTTTCGAGAA GGTGATATAT 61 ATATACTAGT TTTCGAAACG TGCTTGCACG TTTGTCCCAT ACAATTATTA TAAAGTTGAA 121 TTATTATATA ATATTGAAAT TAGAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 55145 to 53037): Exon 1 53995 53904 ( 92 n); cDNA 55 145 ( 91 n); score: 0.946 PPA cDNA 146 160 MATCH C08HBa0165B06.1- SGN-E221650- 0.946 92 0.575 C PGS_C08HBa0165B06.1-_SGN-E221650- (53995 53904) Alignment (genomic DNA sequence = upper lines): ATATATATAT ACTAGTTTTC GAAACGTGCG TTGCACGTTT GCCTTATACA ATTATTATAA 53936 |||||||||| |||||||||| ||||||||| |||||||||| | | ||||| |||||||||| ATATATATAT ACTAGTTTTC GAAACGTGC- TTGCACGTTT GTCCCATACA ATTATTATAA 113 AGTTGAATTA TTATATAATG TTGAAATTAG AA 53904 |||||||||| ||||||||| |||||||||| || AGTTGAATTA TTATATAATA TTGAAATTAG AA 145 hqPGS_C08HBa0165B06.1-_SGN-E221650- (53995 53904) ******************************************************************************** EST sequence 117 -strand 160 n (File: SGN-E221883-) 1 GGCACGAGCT GCAACATCGT AATCCGTGCT CATAAGTGGA GTTTCGAGAA GGTGATATAT 61 ATATACTAGT TTTCGAAACG TGCTTGCACG TTTGTCCCAT ACAATTATTA TAAAGTTGAA 121 TTATTATATA ATATTGAAAT TAGAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 55145 to 53037): Exon 1 53995 53904 ( 92 n); cDNA 55 145 ( 91 n); score: 0.946 PPA cDNA 146 160 MATCH C08HBa0165B06.1- SGN-E221883- 0.946 92 0.575 C PGS_C08HBa0165B06.1-_SGN-E221883- (53995 53904) Alignment (genomic DNA sequence = upper lines): ATATATATAT ACTAGTTTTC GAAACGTGCG TTGCACGTTT GCCTTATACA ATTATTATAA 53936 |||||||||| |||||||||| ||||||||| |||||||||| | | ||||| |||||||||| ATATATATAT ACTAGTTTTC GAAACGTGC- TTGCACGTTT GTCCCATACA ATTATTATAA 113 AGTTGAATTA TTATATAATG TTGAAATTAG AA 53904 |||||||||| ||||||||| |||||||||| || AGTTGAATTA TTATATAATA TTGAAATTAG AA 145 hqPGS_C08HBa0165B06.1-_SGN-E221883- (53995 53904) ******************************************************************************** EST sequence 90 -strand 342 n (File: SGN-E230184-) 1 GGCACGAGAA TTTGGTGGTG CGTTGGGTTG GAGACTAACC CAACAAGAAA TAGACCAACT 61 TCGTTCATTG GCATCAGAAT TAAAACCTGT TACTGGTTTC CCTGTCGAAA AGTTGTAAAC 121 ATCATTTTAC ATGTACATTA ACAAAGTCTT CGAAATGTAA CTAGTACTAA TAAAGCTGCT 181 GCTGCTGCAA CATCGTAATC CGTGCTCATA AGTGGAGTTT CGAGAAGGTG ATATATATAT 241 ACTAGTTTTC GAAACGTGGC TTGCACGTTT GTCCCATACA ATTATTATAA AGTTGAATTA 301 TTATATAATA TTGAAATTAG AAAAAAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 56905 to 52987): Exon 1 54282 54265 ( 18 n); cDNA 215 231 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 53994 53904 ( 91 n); cDNA 232 322 ( 91 n); score: 0.934 PPA cDNA 323 342 MATCH C08HBa0165B06.1- SGN-E230184- 0.934 109 0.319 C PGS_C08HBa0165B06.1-_SGN-E230184- (54282 54265,53994 53904) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 231 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 231 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 231 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 231 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 243 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| ||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGGCTTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 303 TATAATGTTG AAATTAGAA 53904 |||||| ||| ||||||||| TATAATATTG AAATTAGAA 322 hqPGS_C08HBa0165B06.1-_SGN-E230184- (53994 53904) ******************************************************************************** EST sequence 118 -strand 349 n (File: SGN-E221489-) 1 AAAAATGCTG AGCAGGCTAA AGAATTTGGT GGTGCGTTGG GTTGGAGACT AACCCAACAA 61 GAAATAGACC AACTTCGTTC ATTGGCATCA GAATTAAAAC CTGTTACTGG TTTCCCTGTC 121 GAAAAGTTGT AAACATCATT TTACATGTAC ATTAACAAAG TCTTCGAAAT GTAACTAGTA 181 CTAATAAAGC TGCTGCTGCT GCAACATCGT AATCCGTGCT CATAAGTGGA GTTTCGAGAA 241 GGTGATATAT ATATACTAGT TTTCGAAACG TGCTTGCACG TTTGTCCCAT ACAATTATTA 301 TAAAGTTGAA TTATTATATA ATATTGAAAT TAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 57045 to 53047): Exon 1 54282 54265 ( 18 n); cDNA 229 245 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53904 ( 91 n); cDNA 246 335 ( 90 n); score: 0.934 PPA cDNA 336 349 MATCH C08HBa0165B06.1- SGN-E221489- 0.934 109 0.312 C PGS_C08HBa0165B06.1-_SGN-E221489- (54282 54265,53994 53904) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 245 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 245 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 245 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 245 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 257 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 316 TATAATGTTG AAATTAGAA 53904 |||||| ||| |||||| || TATAATATTG AAATTAAAA 335 hqPGS_C08HBa0165B06.1-_SGN-E221489- (53994 53904) ******************************************************************************** EST sequence 132 -strand 395 n (File: SGN-E223641-) 1 TGAATTGGTT GATTGCACAG GAGAATGTTG TTCCCATCCC AGGAGCCAAA AATGCTGAGC 61 AGGCTAAAGA ATTTGGTGGT GCGTTGGGTT GGAGACTAAC CCAACAAGAA ATAGACCAAC 121 TTCGTTCATT GGCATCAGAA TTAAAACCTG TTACTGGTTT CCCTGTCGAA AAGTTGTAAA 181 CATCATTTTA CATGTACATT AACAAAGTCT TCGAAATGTA ACTAGTACTA ATAAAGCTGC 241 TGCTGCTGCA ACATCGTAAT CCGTGCTCAT AAGTGGAGTT TCGAGAAGGT GATATATATA 301 TACTAGTTTT CGAAACGTGC TTGCACGTTT GTCCCATACA ATTATTATAA AGTTGAATTA 361 TTATATAATA TTCAAATTAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 57515 to 53057): Exon 1 54282 54265 ( 18 n); cDNA 276 292 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53904 ( 91 n); cDNA 293 382 ( 90 n); score: 0.923 Intron 2 53903 53414 ( 490 n); Pd: 0.000 (s: 0.90), Pa: 0.000 (s: 0) Exon 3 53413 53401 ( 13 n); cDNA 383 395 ( 13 n); score: 0.923 MATCH C08HBa0165B06.1- SGN-E223641- 0.923 122 0.309 C PGS_C08HBa0165B06.1-_SGN-E223641- (54282 54265,53994 53904,53413 53401) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 292 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 292 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 292 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 292 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 304 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 363 TATAATGTTG AAATTAGAAA TATTAGTTTT ACCAATTTAT ATTTTATTTA TTAAATAAAA 53863 |||||| || |||||| || TATAATATTC AAATTAAAA. .......... .......... .......... .......... 382 TTCATAATAA TCGAATAGTA CATTGACCAT CAAACAAGAA TTTTTTTAAA AATAAATATA 53803 .......... .......... .......... .......... .......... .......... 382 TTATTATAGC ATCTAATAAT ATGAATATAT CTGTATAACT TATTCTTAAT AATCTCTCAT 53743 .......... .......... .......... .......... .......... .......... 382 TACTCTCCAT ATTAGTAAGT ACACAAATGT GTAGCTACTT AAAGAAACTA TATTAGTAAG 53683 .......... .......... .......... .......... .......... .......... 382 GAAAGACAAA AGTAAATAAA TATTATAAAA GTATATTTAA AAATGAATCT AAATGTCATA 53623 .......... .......... .......... .......... .......... .......... 382 AATTAGTAAT TTCAGCACTA ATAAAAATAG CTTATAACAT TCATAATTTC ATAGAAGATT 53563 .......... .......... .......... .......... .......... .......... 382 ATATTAAAGA AGTATAATCG GTAAAGAATA CAAAAAAAAT TAAACAAATA AGAATAAATA 53503 .......... .......... .......... .......... .......... .......... 382 CAACATTTAT ATCCTTCTTA AGACTTTTAA TATAACAATA TATATAGTAA AAGAAATACA 53443 .......... .......... .......... .......... .......... .......... 382 CAAGGAGTAA AAAAATTTTC TCCCGTAACA AAAAAAAAAC AA 53401 | ||||||||| || .......... .......... .........A AAAAAAAAAA AA 395 hqPGS_C08HBa0165B06.1-_SGN-E223641- (53994 53904) ******************************************************************************** EST sequence 131 -strand 374 n (File: SGN-E223115-) 1 AGAATGTTGT TCCCATCCCA GGAGCCAAAA ATGCTGAGCA GGCTAAAGAA TTTGGTGGTG 61 CGTTGGGTTG GAGACTAACC CAACAAGAAA TAGACCAACT TCGTTCATTG GCATCAGAAT 121 TAAAACCTGT TACTGGTTTC CCTGTCGAAA AGTTGTAAAC ATCATTTTAC ATGTACATTA 181 ACAAAGTCTT CGAAATGTAA CTAGTACTAA TAAAGCTGCT GCTGCTGCAA CATCGTAATC 241 CGTGCTCATA AGTGGAGTTT CGAGAAGGTG ATATATATAT ACTAGTTTTC GAAACGTGCT 301 TGCACGTTTG TCCCATACAA TTATTATAAA GTTGAATTAT TATATAATAT TGAAATTAAG 361 AGAAAAAAAA AAAA Predicted gene structure (within gDNA segment 57305 to 53057): Exon 1 54282 54265 ( 18 n); cDNA 255 271 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53907 ( 88 n); cDNA 272 358 ( 87 n); score: 0.943 Intron 2 53906 53094 ( 813 n); Pd: 0.000 (s: 0.92), Pa: 0.867 (s: 0) Exon 3 53093 53079 ( 15 n); cDNA 359 373 ( 15 n); score: 0.733 MATCH C08HBa0165B06.1- SGN-E223115- 0.943 121 0.324 C PGS_C08HBa0165B06.1-_SGN-E223115- (54282 54265,53994 53907,53093 53079) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 271 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 271 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 271 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 271 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 283 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATTA 53923 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| |||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTA 342 TATAATGTTG AAATTAGAAA TATTAGTTTT ACCAATTTAT ATTTTATTTA TTAAATAAAA 53863 |||||| ||| |||||| TATAATATTG AAATTA.... .......... .......... .......... .......... 358 TTCATAATAA TCGAATAGTA CATTGACCAT CAAACAAGAA TTTTTTTAAA AATAAATATA 53803 .......... .......... .......... .......... .......... .......... 358 TTATTATAGC ATCTAATAAT ATGAATATAT CTGTATAACT TATTCTTAAT AATCTCTCAT 53743 .......... .......... .......... .......... .......... .......... 358 TACTCTCCAT ATTAGTAAGT ACACAAATGT GTAGCTACTT AAAGAAACTA TATTAGTAAG 53683 .......... .......... .......... .......... .......... .......... 358 GAAAGACAAA AGTAAATAAA TATTATAAAA GTATATTTAA AAATGAATCT AAATGTCATA 53623 .......... .......... .......... .......... .......... .......... 358 AATTAGTAAT TTCAGCACTA ATAAAAATAG CTTATAACAT TCATAATTTC ATAGAAGATT 53563 .......... .......... .......... .......... .......... .......... 358 ATATTAAAGA AGTATAATCG GTAAAGAATA CAAAAAAAAT TAAACAAATA AGAATAAATA 53503 .......... .......... .......... .......... .......... .......... 358 CAACATTTAT ATCCTTCTTA AGACTTTTAA TATAACAATA TATATAGTAA AAGAAATACA 53443 .......... .......... .......... .......... .......... .......... 358 CAAGGAGTAA AAAAATTTTC TCCCGTAACA AAAAAAAAAC AATCTAAAAT AGTAAAGATA 53383 .......... .......... .......... .......... .......... .......... 358 AAATTTATGA TTCAAAATAT CATTCTAATG AGGATCAATA AATATTAATA TTTCAAAACA 53323 .......... .......... .......... .......... .......... .......... 358 AAAAAAAGTA CCTGTAAATT GCATAATAAT TCACATCAAC ACGAGGCAAA TGGTAAAGAG 53263 .......... .......... .......... .......... .......... .......... 358 CAATTATTTT TAAATGATAC ATATATATAG CTAAAGATTT ATTGGATAAG ATGAAAAGGT 53203 .......... .......... .......... .......... .......... .......... 358 GAAAAGTTGT TTAAGTTAAT TTTAGAAGTT GAATGATCTT ACACATGCGG TAGAGGAAAG 53143 .......... .......... .......... .......... .......... .......... 358 GTGATTGTTT TTACTAATAA TTCAATACAT TTAATTATAC TAATTACAGA GAGAGGATAA 53083 | |||| | || .......... .......... .......... .......... .........A GAGAAAAAAA 369 CAAA 53079 ||| AAAA 373 hqPGS_C08HBa0165B06.1-_SGN-E223115- (53994 53907) ******************************************************************************** EST sequence 17 -strand 431 n (File: SGN-E203169-) 1 AAAGGAGATT GGAGATAGCT ACAATAAGAC TTCAACTCAG GTGGTCCTGA ATTGGTTGAT 61 TGCACAGGAG AATGTTGTTC CCATCCCAGG AGCCAAAAAT GCTGAGCAGG CTAAAGAATT 121 TGGTGGTGCG TTGGGTTGGA GACTAACCCA ACAAGAAATA GACCAACTTC GTTCATTGGC 181 ATCAGAATTA AAACCTGTTA CTGGTTTCCC TGTCGAAAAG TTGTAAACAT CATTTTACAT 241 GTACATTAAC AAAGTCTTCG AAATGTAACT AGTACTAATA AAGCTGCTGC TGCTGCAACA 301 TCGTAATCCG TGCTCATAAG TGGAGTTTCG AGAAGGTGAT ATATATATAC TAGTTTTCGA 361 AACGTGCTTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATTC TAAAAAAAAA 421 AAAAAAAAAA A Predicted gene structure (within gDNA segment 57985 to 53104): Exon 1 54282 54265 ( 18 n); cDNA 323 339 ( 17 n); score: 0.667 Intron 1 54264 53995 ( 270 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 2 53994 53924 ( 71 n); cDNA 340 409 ( 70 n); score: 0.944 PPA cDNA 412 431 MATCH C08HBa0165B06.1- SGN-E203169- 0.944 89 0.206 C PGS_C08HBa0165B06.1-_SGN-E203169- (54282 54265,53994 53924) Alignment (genomic DNA sequence = upper lines): GAGGGAGGAG AGAGGCGAGC GAGTGAGATT GGGAGAGGGA GGAGAGAGAC GAATTGTATA 54223 ||| ||| | ||| || GAGTTTCGAG A-AGGTGA.. .......... .......... .......... .......... 339 GGTCTATCTA TCGAACTGTA TAAGTCTATC TATTAAATAA TTATATATTT ATAGCTGGTA 54163 .......... .......... .......... .......... .......... .......... 339 TACGCATGTA CTTGTATATC TGGTGAGCGA GATTGGGAGA GAGGCAAGTG ATAGAGGGTA 54103 .......... .......... .......... .......... .......... .......... 339 GAGAGTGGAG AGAGACGAAC TGTATCTGTA TAGCTGTCAG AGGCAGAGAA TGGAGAGAGA 54043 .......... .......... .......... .......... .......... .......... 339 CTAACTGTAT TTGTATAATT GTAATTATTG TATATATATA TATATATATA TATATATACT 53983 || |||||||||| .......... .......... .......... .......... ........TA TATATATACT 351 AGTTTTCGAA ACGTGCGTTG CACGTTTGCC TTATACAATT ATTATAAAGT TGAATTATT 53924 |||||||||| |||||| ||| |||||||| | |||||||| |||||||||| ||||||||| AGTTTTCGAA ACGTGC-TTG CACGTTTGTC CCATACAATT ATTATAAAGT TGAATTATT 409 hqPGS_C08HBa0165B06.1-_SGN-E203169- (53994 53924) ******************************************************************************** EST sequence 264 +strand 460 n (File: SGN-E243215+) 1 TTATTGTAGA TGACCAATTT TTTCTTCGAA TACGAAATTA AATTACAATA CACACAAAAA 61 AAATATTTGA ATTTTTTTTA TTTAAACTAA GGAATGAAAG AAAAAAACAA AATAAGAATA 121 AGAAACTCAA ATTATTATAA TAAAAGAAGT CAAAAAATAA TTTTTGTATG AAAAAATTAA 181 AATATACCTT GAACTTTGAT AGAAGAATCA TATATATCCC TAAATATTTT TTTTAAAAAA 241 AAATTAGAAG TAACAAATAT AAATTTAAAA CTAATTTTTT AACTTTCGTT AAATGAAGGG 301 TATATGTGAG CCATTTTCTA ACGGCAGGGG TATATGTGAG CCGTTTGTAT AACGATAAGG 361 GCATATATGA ACCACTTTTA TTACGAGGGA TATATCAGCT CTAAATGACA AAGTTGAGAG 421 GTATATCAGA CCCTTTTCCC TATTTTTTAA AATTTCATAC Predicted gene structure (within gDNA segment 56064 to 54142): Exon 1 55464 55011 ( 454 n); cDNA 1 453 ( 453 n); score: 0.921 MATCH C08HBa0165B06.1- SGN-E243215+ 0.921 454 0.987 C PGS_C08HBa0165B06.1-_SGN-E243215+ (55464 55011) Alignment (genomic DNA sequence = upper lines): TTATTGTAGA TGACCAAATT TTTTCTTCGA ATACGAAATT AAATTACAAA ACACACAAAA 55405 |||||||||| ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| TTATTGTAGA TGACC-AATT TTTTCTTCGA ATACGAAATT AAATTACAAT ACACACAAAA 59 AAAATAGTTT AATTTTTTAT TCTTTAAACT AAGGAATGAA AG-AAAAAGC AAAATAAGAA 55346 |||||| || |||||||| | | |||||||| |||||||||| || ||||| | |||||||||| AAAATATTTG AATTTTTT-T TATTTAAACT AAGGAATGAA AGAAAAAAAC AAAATAAGAA 118 TAAGAAATTC AAATAATTAT AATAAAAGAA GTCAAAAAAT AATTTATGTA TGAAAAAAAT 55286 ||||||| || |||| ||||| |||||||||| |||||||||| ||||| |||| || ||||||| TAAGAAACTC AAATTATTAT AATAAAAGAA GTCAAAAAAT AATTTTTGTA TG-AAAAAAT 177 TAAAATATAC TTTGAACTTT GATAGAAGAA TCATATATAC CCCTAAAT-T TTTTTTTAAA 55227 |||||||||| ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| TAAAATATAC CTTGAACTTT GATAGAAGAA TCATATATAT CCCTAAATAT TTTTTTTAAA 237 AAAAAATTAG AAGTAATAAA TATAAATTTA AAACTAATTT TTTTAAATTC GTTAAATGAA 55167 |||||||||| |||||| ||| |||||||||| |||||||||| ||| | ||| |||||||||| AAAAAATTAG AAGTAACAAA TATAAATTTA AAACTAATTT TTTAACTTTC GTTAAATGAA 297 GGGTATATGT GAGCCATTTC GTAATGGCAG GGGTATATGT GAGCCATTTG TATAACGGTA 55107 |||||||||| ||||||||| ||| ||||| |||||||||| ||||| |||| ||||||| || GGGTATATGT GAGCCATTTT CTAACGGCAG GGGTATATGT GAGCCGTTTG TATAACGATA 357 TGGGCATATA TGAGCCACTT TTATAACGAG GGGTATATCA GCTCCAAATG ACAAAGTTGA 55047 ||||||||| ||| |||||| |||| ||||| || ||||||| |||| ||||| |||||||||| AGGGCATATA TGAACCACTT TTATTACGAG GGATATATCA GCTCTAAATG ACAAAGTTGA 417 GAGGTATATC AGACCTTTTT CCCTTATTTC TAAAAT 55011 |||||||||| ||||| |||| |||| ||| |||||| GAGGTATATC AGACCCTTTT CCCTATTTTT TAAAAT 453 hqPGS_C08HBa0165B06.1-_SGN-E243215+ (55464 55011) ******************************************************************************** EST sequence 12 -strand 701 n (File: SGN-E578389-) 1 TCAAATAATT ATAATAAATA AGTCAAAAAA ATAATTTATG TATTAAAAAA ATTTGAAATA 61 TACCTTGAAC TTTGAAAAAA GAATCATATA TGCCCCTAAA TATATTTTTT TTTAAAATTA 121 AAGTAAAATT ATAAATTTAA AAGTAATTTT TTCACTTTCG TTAAATGAAG GGTATATATG 181 AGCTCATTTT GTAACGGCAG AGGTATATGT GAACCATTTG TATAACGGTA AGGGTATATA 241 TGAGCCACTT TCATAACGAG GGGTATATCA GTTTCAAATG ACAAAGTTGA GGGGTATATC 301 ATACCCTTTT CCCATAATAT TATTCATTTT TGGGTTGACG GGTCAAACCT TGGGCTGCTT 361 AGGACTTGAT TAGACCGCTA TTTTATTGAC TCTTTAATTA ATGGGCAACT TTCACATATA 421 ACAAACAAAA AATTCATATT TGTATGCTAT AACAAAGTTT GCATAATTGC GCTCCATAGC 481 AAACATAAAA TTGTATAATT CGCTGACCTA AATTGTATAA TTCGCTGGCC TATTTCGCTG 541 CAATTGTATA ATTCGCTATC CTATTTAACT ACAATTGTAT AATTCGCTGC CTATTTCGCT 601 GCAATATTAT TATAAAATTT GCTTTGCATA TAATTGAACC GAATTAAAAT GTATGTATAT 661 TGCATAATTA TAAGTGTATA GCAATAAGAT ATATGTTTTT C Predicted gene structure (within gDNA segment 55947 to 50346): Exon 1 55337 55015 ( 323 n); cDNA 1 322 ( 322 n); score: 0.856 Intron 1 55014 51184 (3831 n); Pd: 0.000 (s: 0.84), Pa: 0.679 (s: 0) Exon 2 51183 51154 ( 30 n); cDNA 323 352 ( 30 n); score: 0.550 MATCH C08HBa0165B06.1- SGN-E578389- 0.856 353 0.504 C PGS_C08HBa0165B06.1-_SGN-E578389- (55337 55015,51183 51154) Alignment (genomic DNA sequence = upper lines): TCAAATAATT ATAATAAAAG AAGTCA-AAA AATAATTTAT GTATGAAAAA AA-TTAAAAT 55280 |||||||||| ||||||| | |||||| ||| |||||||||| |||| ||||| || || |||| TCAAATAATT ATAATAA-AT AAGTCAAAAA AATAATTTAT GTATTAAAAA AATTTGAAAT 59 ATACTTTGAA CTTTGATAGA AGAATCATAT ATACCCCTAA ATTTTTTTTT AAAAAAAAAT 55220 |||| ||||| |||||| | | |||||||||| || ||||||| || | ||||| ||||| ATACCTTGAA CTTTGAAAAA AGAATCATAT ATGCCCCTAA ATATATTTTT -TTTTAAAAT 118 TAGAAGTAAT AAATATAAAT TTAAAACTAA TTTTTTTAAA TTCGTTAAAT GAAGGGTATA 55160 || |||||| || ||||||| |||||| ||| |||||| | |||||||||| |||||||||| TA-AAGTAA- AATTATAAAT TTAAAAGTAA TTTTTTCACT TTCGTTAAAT GAAGGGTATA 176 TGTGAGC-CA TTTCGTAATG GCAGGGGTAT ATGTGAGCCA TTTGTATAAC GGTATGGGCA 55101 | ||||| || ||| |||| | |||| ||||| |||||| ||| |||||||||| |||| ||| | TATGAGCTCA TTTTGTAACG GCAGAGGTAT ATGTGAACCA TTTGTATAAC GGTAAGGGTA 236 TATATGAGCC ACTTTTATAA CGAGGGGTAT ATCAGCTCCA AATGACAAAG TTGAGAGGTA 55041 |||||||||| ||||| |||| |||||||||| ||||| | || |||||||||| ||||| |||| TATATGAGCC ACTTTCATAA CGAGGGGTAT ATCAGTTTCA AATGACAAAG TTGAGGGGTA 296 TATCAGACCT TTTTCCCTTA TTTCTAAAAT GAAAGTCTAG AGTTCGCTTG AATTGACTTA 54981 ||||| ||| ||||||| || | || TATCATACCC TTTTCCCATA ATATTA.... .......... .......... .......... 322 AAAGTTGATC AAATCTACTT TTAAAGTCCT GTTTTATTTT TTATTTTTGA GAGTTTTGAC 54921 .......... .......... .......... .......... .......... .......... 322 AAAGCAGAAA ATAACTTATA ATAAGTTAGA GATGACTTTA AAAAAAAGTT AAAAATTACA 54861 .......... .......... .......... .......... .......... .......... 322 AGTAGCTACT TCCTTACTTT TCATTTTTTA ACTTAAAAGT TACTAAAGTT TAACTTTTAA 54801 .......... .......... .......... .......... .......... .......... 322 AAAAATAAGG AAAAAAGTCT GAAATATATA TCAACTTTGA CCGAAATTAT ATTAACGATA 54741 .......... .......... .......... .......... .......... .......... 322 TCAAACTTTG GAAATGACCT TTTACCCCTG TACTATTTAA TAGTGTATTT TAAAGGTATA 54681 .......... .......... .......... .......... .......... .......... 322 TATGTATCCA CGTGAACATC ACAAATATTC CATCATTAAA AATAGAAAGT CATCATAAAA 54621 .......... .......... .......... .......... .......... .......... 322 TTTGATATGT AACAATAATT TCGACCAAAA TTGAGATATT TTTCAGACCC TTTTTTCAAA 54561 .......... .......... .......... .......... .......... .......... 322 AAATACTTTT TATGACAAGA AAGTACCTGG GATGTTGAGT CGTTGACGCT AAACTTATTA 54501 .......... .......... .......... .......... .......... .......... 322 TTAATATGAC AAGAAAAAAT AGTCCTATGA GTTTCCTGGA AAATACATTG TAATTAATTC 54441 .......... .......... .......... .......... .......... .......... 322 ACATGGGCAC TTTTTATTTT TTTTTAAACA TATTGTGGCC AACTGAGAAA TTATAGTTAG 54381 .......... .......... .......... .......... .......... .......... 322 GATTTTAAAT TGGATTTTTA TTTCATATAT CCATTTAAAA ATAATTCAAT ATACTCCATA 54321 .......... .......... .......... .......... .......... .......... 322 ACTATAATTT GATAATTACG ATTTGTAGCT ATATATAAGA GGGAGGAGAG AGGCGAGCGA 54261 .......... .......... .......... .......... .......... .......... 322 GTGAGATTGG GAGAGGGAGG AGAGAGACGA ATTGTATAGG TCTATCTATC GAACTGTATA 54201 .......... .......... .......... .......... .......... .......... 322 AGTCTATCTA TTAAATAATT ATATATTTAT AGCTGGTATA CGCATGTACT TGTATATCTG 54141 .......... .......... .......... .......... .......... .......... 322 GTGAGCGAGA TTGGGAGAGA GGCAAGTGAT AGAGGGTAGA GAGTGGAGAG AGACGAACTG 54081 .......... .......... .......... .......... .......... .......... 322 TATCTGTATA GCTGTCAGAG GCAGAGAATG GAGAGAGACT AACTGTATTT GTATAATTGT 54021 .......... .......... .......... .......... .......... .......... 322 AATTATTGTA TATATATATA TATATATATA TATATACTAG TTTTCGAAAC GTGCGTTGCA 53961 .......... .......... .......... .......... .......... .......... 322 CGTTTGCCTT ATACAATTAT TATAAAGTTG AATTATTATA TAATGTTGAA ATTAGAAATA 53901 .......... .......... .......... .......... .......... .......... 322 TTAGTTTTAC CAATTTATAT TTTATTTATT AAATAAAATT CATAATAATC GAATAGTACA 53841 .......... .......... .......... .......... .......... .......... 322 TTGACCATCA AACAAGAATT TTTTTAAAAA TAAATATATT ATTATAGCAT CTAATAATAT 53781 .......... .......... .......... .......... .......... .......... 322 GAATATATCT GTATAACTTA TTCTTAATAA TCTCTCATTA CTCTCCATAT TAGTAAGTAC 53721 .......... .......... .......... .......... .......... .......... 322 ACAAATGTGT AGCTACTTAA AGAAACTATA TTAGTAAGGA AAGACAAAAG TAAATAAATA 53661 .......... .......... .......... .......... .......... .......... 322 TTATAAAAGT ATATTTAAAA ATGAATCTAA ATGTCATAAA TTAGTAATTT CAGCACTAAT 53601 .......... .......... .......... .......... .......... .......... 322 AAAAATAGCT TATAACATTC ATAATTTCAT AGAAGATTAT ATTAAAGAAG TATAATCGGT 53541 .......... .......... .......... .......... .......... .......... 322 AAAGAATACA AAAAAAATTA AACAAATAAG AATAAATACA ACATTTATAT CCTTCTTAAG 53481 .......... .......... .......... .......... .......... .......... 322 ACTTTTAATA TAACAATATA TATAGTAAAA GAAATACACA AGGAGTAAAA AAATTTTCTC 53421 .......... .......... .......... .......... .......... .......... 322 CCGTAACAAA AAAAAAACAA TCTAAAATAG TAAAGATAAA ATTTATGATT CAAAATATCA 53361 .......... .......... .......... .......... .......... .......... 322 TTCTAATGAG GATCAATAAA TATTAATATT TCAAAACAAA AAAAAGTACC TGTAAATTGC 53301 .......... .......... .......... .......... .......... .......... 322 ATAATAATTC ACATCAACAC GAGGCAAATG GTAAAGAGCA ATTATTTTTA AATGATACAT 53241 .......... .......... .......... .......... .......... .......... 322 ATATATAGCT AAAGATTTAT TGGATAAGAT GAAAAGGTGA AAAGTTGTTT AAGTTAATTT 53181 .......... .......... .......... .......... .......... .......... 322 TAGAAGTTGA ATGATCTTAC ACATGCGGTA GAGGAAAGGT GATTGTTTTT ACTAATAATT 53121 .......... .......... .......... .......... .......... .......... 322 CAATACATTT AATTATACTA ATTACAGAGA GAGGATAACA AATTTAATCA TTTAACCACA 53061 .......... .......... .......... .......... .......... .......... 322 TTAATTATAG AGAAAGAATT AATAACTTTT ATTTATTTTT TTTAAAAAGT AATTCCTAAC 53001 .......... .......... .......... .......... .......... .......... 322 AATTTTCTAT GAAATAATTT CTAACAATTT TCTATAAAAT ATTTTTGTCT TTCAAAGTTT 52941 .......... .......... .......... .......... .......... .......... 322 GACTTTACAC CTTCTTAGTT TTAGTATAAT ATAATTATTA CTTAGTATGT AAATAATTAG 52881 .......... .......... .......... .......... .......... .......... 322 AATTTAAACT ATTGTGTCTA GATGCATGTA TTTAAATATG ATTATATAAT ATTAAATTAA 52821 .......... .......... .......... .......... .......... .......... 322 TTATATATTA ATATTTAATT TAATTTAGGG ATAAAATAAG GACAAAATGG TAATTCAACT 52761 .......... .......... .......... .......... .......... .......... 322 TTTAAGTTAA GAGCTTCCCA CTTATAATAA TAAGAGTATA TGTTATATCA TAAAAAAAAT 52701 .......... .......... .......... .......... .......... .......... 322 CATCTAGCAG ACTAAGTACA AATATGTCAT AAATATTTTC TTGGGATAGC TTAATATATA 52641 .......... .......... .......... .......... .......... .......... 322 GAGGTTGTGA ATATAATCGA AGACATCTAT AATCTTTTTC AACACATCGC ATTAGTACCA 52581 .......... .......... .......... .......... .......... .......... 322 ATTTATACTC TATCAATAGT TATTTCTCCA AACTCAAAAG AGAATTAAAA AAAATTATAA 52521 .......... .......... .......... .......... .......... .......... 322 AAATATTGAA CCAATGATTT CTATAATCTG GCCATGAACA AAATTACACT AATAACTTAT 52461 .......... .......... .......... .......... .......... .......... 322 CTTTTAAGTC TAGCAGGGCA CTCTTATAAT CAAAGGTTCT GATACCATCA TTCTGCTATC 52401 .......... .......... .......... .......... .......... .......... 322 GAAAAAGAAA AGCATATCAA AGAAAACATA AGAATTTTCA GAATGTTCAT TGATGTATTT 52341 .......... .......... .......... .......... .......... .......... 322 TTTTTTTGTA CCCACAAAAT AAGAATATGC AAAAATGAAA CAAAAAGAAA AGAAATAATA 52281 .......... .......... .......... .......... .......... .......... 322 CATACTTACT GGAGTATCTC CGATGAACAT ATGAAATTAG GAAGATGGTA GATTAGATTT 52221 .......... .......... .......... .......... .......... .......... 322 TTGAATGATT AACATAGAAT ACACACAATA TATTATAGTA AATGAGACTC TTTGTTTCCC 52161 .......... .......... .......... .......... .......... .......... 322 TTGTCTGTTA TGCCTTTTCA GTTGCATCAT TTAAATATGT CTTCATTATT ATATGATAGA 52101 .......... .......... .......... .......... .......... .......... 322 ATTACTGAAG GCTGAAACTA ATAATTATAT ATGGTAATTA AGATACTATA AATTAAAAGT 52041 .......... .......... .......... .......... .......... .......... 322 TTTATATTTA ATATTAAAAA ATAACTCCAA GAAATTGAAC AAATTACAAA AAAAAAAATC 51981 .......... .......... .......... .......... .......... .......... 322 TCATTAAAAT ATTTTTCTCA CCTATTAAAG CATCAAATTA GAATTAAGGA AACATAAATC 51921 .......... .......... .......... .......... .......... .......... 322 AACACATATA AACAAATTAA CAATTAATTA ATTTATAAAT AGTCTAAGAG ATAAACTTCA 51861 .......... .......... .......... .......... .......... .......... 322 AAAAATTTAA ACTATTTAAA AAAAATAATA ACAGGAAAAC GTGTCTTTAA GATAATTAAA 51801 .......... .......... .......... .......... .......... .......... 322 CTTTATTATA TACTAATATT TTACTAATAA CCAATTAGAT GATTTTTACT ATTTCAATGC 51741 .......... .......... .......... .......... .......... .......... 322 AAGGACAAGG GTAAGACTTT TCAAATTTAA AAATTAAGAG TAATTAAGTT AAAGACTATA 51681 .......... .......... .......... .......... .......... .......... 322 AAATAATTAG CAATTTATTT ACTAATATTT AGTTACTTTG ATTAAGATTT AGTATAGGGG 51621 .......... .......... .......... .......... .......... .......... 322 CAAAATAGTA ATTCAACGTT TGCTTAACAT TCTTCCCACT TATTCACATT ACATGTTTAT 51561 .......... .......... .......... .......... .......... .......... 322 TTTTGCATGT CTGCTTAACG TCTGAAGCAG GATCAGTAAG CAAATCATAA CTCTTGTAAA 51501 .......... .......... .......... .......... .......... .......... 322 TTTTATTGCC TTTATTCTTC ACTTCTTTAG TAAGTGAAAC ATGTACAATC TTACACAAAT 51441 .......... .......... .......... .......... .......... .......... 322 TCGTGTTATT TACTTTCAAG TTGCAGAGTA GGAAATTACC TTGGATCTAA AAGAAATTCC 51381 .......... .......... .......... .......... .......... .......... 322 GTTGGAATAT AATTGATTCC TACTCTCAAA TCTGTTGCAG CACCAAGTTC AATTATTTTG 51321 .......... .......... .......... .......... .......... .......... 322 AACGCGCAAC AACCTGCTTC AGAGAGACAT TAATTACAAC TTACAAGTAC GCAATCAAAC 51261 .......... .......... .......... .......... .......... .......... 322 TCAACCATTG TGAATCAGGT CAGCACTTTG TTTTTTAAAT AATATGTATA TCCATACGCC 51201 .......... .......... .......... .......... .......... .......... 322 TATGCAGTTT ATGACAGAGC A-CTTTCAGT TGCTGATCTA AAACCTTG 51154 | | ||| || || | | |||||||| .......... .......TTC ATTTTTGGGT TGACG-GGTC AAACCTTG 352 hqPGS_C08HBa0165B06.1-_SGN-E578389- (55337 55015) ******************************************************************************** EST sequence 133 -strand 450 n (File: SGN-E237320-) 1 GGTAAAACGT ATCCCTAAGG GCAACTAAAT TATCCTTCAT TTTCCATCAG ACTTGGATCA 61 ACTCCTCAGA CATATACCAG AACCGTAACC AATGTTGGTG ATGCTAAATC ATCTTACAAA 121 GTGGAGATAG TTTCACCAAA AGGAGTTGTC GTGAAAGTTG AACCCTCCGC GCTAAATTTC 181 TCAACGTTGA ACCAGAAGTT GACATATCAA GTGATATTTA CCAAGACAAC TAATATCTCA 241 ACTACCAGTG ATGTTGAGGG ATTTTTGAAG TGGAATTCTA ATAGGCACTC TGTAAGAAGT 301 CCAATTGCAG TTAGAGTGTC TGCTGAATAA AACTAAAATG CTTTCAATCT AAAATGTAAA 361 AATAAGTGCA GAAATTATTC ACAATTAATC ATATTGGATT GCTGTTTTTT TTTTCCAGTA 421 TATGTTTTAT GTCAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 59004 to 52788): Exon 1 57957 57640 ( 318 n); cDNA 1 315 ( 315 n); score: 0.847 Intron 1 57639 57509 ( 131 n); Pd: 0.000 (s: 0.87), Pa: 0.953 (s: 0) Exon 2 57508 57474 ( 35 n); cDNA 316 348 ( 33 n); score: 0.600 Intron 2 57473 56147 (1327 n); Pd: 0.437 (s: 0), Pa: 0.789 (s: 0) Exon 3 56146 56140 ( 7 n); cDNA 349 355 ( 7 n); score: 1.000 Intron 3 56139 54293 (1847 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0) Exon 4 54292 54282 ( 11 n); cDNA 356 366 ( 11 n); score: 0.727 PPA cDNA 434 450 MATCH C08HBa0165B06.1- SGN-E237320- 0.847 371 0.824 C PGS_C08HBa0165B06.1-_SGN-E237320- (57957 57640,57508 57474,56146 56140,54292 54282) Alignment (genomic DNA sequence = upper lines): GGTGAAAAGT ATCCTTGAAG CACAATTAAA CTATCCTTCG TTTTCCATAT TTGGACTTGG 57898 ||| ||| || |||| | ||| ||| |||| |||||||| |||||| || | |||||| GGTAAAACGT ATCCCT-AAG GGCAACTAAA TTATCCTTCA TTTTCC--AT CAG-ACTTGG 56 ATCAACTCCT CAGACATATA CCAGAACTGT AACCAATGTT GGTGATGCTA CATCATCTTA 57838 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ||||||||| ATCAACTCCT CAGACATATA CCAGAACCGT AACCAATGTT GGTGATGCTA AATCATCTTA 116 CAAAGTGGAG GTAGCTTCAC CAGAAGGCGT TGCCATCGAA GTTGAACCCT CCGAGCTAAA 57778 |||||||||| ||| ||||| || |||| || || | | || |||||||||| ||| |||||| CAAAGTGGAG ATAGTTTCAC CAAAAGGAGT TGTCGTGAAA GTTGAACCCT CCGCGCTAAA 176 TTTCTCCGAG TTGAACCAGA AGTTGACATA CCAAGTGACA TTTTCCAAGA CAACTAATAG 57718 |||||| | |||||||||| |||||||||| ||||||| | ||| |||||| ||||||||| TTTCTCAACG TTGAACCAGA AGTTGACATA TCAAGTGATA TTTACCAAGA CAACTAATAT 236 CTCAAACCCT GAGGTTATTG AGGGATTCTT GAAGTGGACT TCTAATAGGC ACTCAGTGAG 57658 ||||| | | | ||| ||||||| || |||||||| | |||||||||| |||| || || CTCAACTACC AGTGATGTTG AGGGATTTTT GAAGTGGAAT TCTAATAGGC ACTCTGTAAG 296 AAGTCCAATT GCAGTT-GTG TCTGCCTAGT CAAAAATTGG CTATATAAGT GCATTAAGTA 57599 |||||||||| |||||| | AAGTCCAATT GCAGTTAGA. .......... .......... .......... .......... 315 CTCGGACATT TGAAAATGCT GTTTGTTTAT ATGTTACTTT TTAATATTAT ATTATTAAAT 57539 .......... .......... .......... .......... .......... .......... 315 GTATTGTTTC AATAAACTTT ATGTTCACAG TTGTTTGAAG AATGCAAAAG CATATCCTCT 57479 ||| || | ||| ||| | || || | .......... .......... .......... GTGTCTGCTG AAT-AAAACT AAAATGCT-T 343 TTGATGTTAG TGTCCATGCA CTGCTCAACT TTTCTTCTTG ATTTCATTGA TAATAAATAT 57419 | || TCAAT..... .......... .......... .......... .......... .......... 348 TACTTGAGTG ATTATGTAAG ATTTTCACTC CATACTTAAA TTTGGGAAAT TTGCTGTCAC 57359 .......... .......... .......... .......... .......... .......... 348 CCTTTGATCC AGAATCTTGA CAGTGACTTC AAAAATAAAG TCTTAGTCTT CGGTGACTTC 57299 .......... .......... .......... .......... .......... .......... 348 AAAAAGTAAT TGGGACGTTG ATGCTTTAAC TATATTAGTA AGACAAGAAA AGTAATAGAG 57239 .......... .......... .......... .......... .......... .......... 348 ACATATACTA TGAATTTCCA AGAAAAAACG TTGTAATTAA TTCGAACGAA CTTAAATTTT 57179 .......... .......... .......... .......... .......... .......... 348 TTAACATATT GTGGCCAAAT GAGAAATCTA TAGCCAACTA TACATGTCAA GTCCAAATTC 57119 .......... .......... .......... .......... .......... .......... 348 TACCATTGAA GGGGACCAAT GTACATCATC CATGGTACAT AATTTATCTT CCAAAGAAAT 57059 .......... .......... .......... .......... .......... .......... 348 TAAATTAACC AATACATATT TGGTTTTGTA ATAATTTTCA CAAAAAAACA AGAATTACAG 56999 .......... .......... .......... .......... .......... .......... 348 AATGCATTGT TGCTATTTGT GTGTGGCCCA TCATGTATTG GTAGCATTTT TTTACTAGTT 56939 .......... .......... .......... .......... .......... .......... 348 AATAGAGTAA GGATTGTCCA AATTCGTATA AAGATATCAT CATTCTTAAT TAGCTCCTTT 56879 .......... .......... .......... .......... .......... .......... 348 CTGCATGCCC GGTGAAATGG AATGAATCAA GAATTAGGAC GACGTATATA ACTCTAATAT 56819 .......... .......... .......... .......... .......... .......... 348 AATAAGAAAT GAATTTGCCC TACCTAAACC CTTACAACTA GTAAATAGAG TAAGGATTGT 56759 .......... .......... .......... .......... .......... .......... 348 TCAAATCCGT ATAAAGAGAT ATTCGCATTC TTAATTATCC GTATATGATG TATAGCTATG 56699 .......... .......... .......... .......... .......... .......... 348 TATCAGACAT GTATAAATAT TCATATATCT CTGTTTGTAC ATGCATTGTA TCTGTTCATC 56639 .......... .......... .......... .......... .......... .......... 348 TTCCTTAACA ATGTGTTTTC TTGAATCTCA ACCAACTCAA ATCTTCTCTA AACACTCCGA 56579 .......... .......... .......... .......... .......... .......... 348 ATGGTTTTGT TGTTGCCTAG CTCTTATTGA ATTGTATATC TTTTGCATAT AAGAAAAAGA 56519 .......... .......... .......... .......... .......... .......... 348 TTTGATTATG ATATAGGGAC TCAACACTTC ACGATAGCGA ATAATTTTAT ATGTATCCTG 56459 .......... .......... .......... .......... .......... .......... 348 CCCTAAAAGA AAGAAAAAAC AAAAAAACTT TACTCGCCTC TCCTATTTTA CTCGCCTCTC 56399 .......... .......... .......... .......... .......... .......... 348 TCCTCTCTCG CTCATCCCTC TCCTTGTATC CGGTATATAT ATGTTTTTGG TGTGATTCTC 56339 .......... .......... .......... .......... .......... .......... 348 ATAATGTATA TGGGGATGAT TCACATATAC CACAATTGAA GGAGATCAAT CTACATCATC 56279 .......... .......... .......... .......... .......... .......... 348 CATAATTCAC GTTTTGTCTT GCAAGTAAAT TAAAGTAACC AACTTTAGTT TTGTTATTAA 56219 .......... .......... .......... .......... .......... .......... 348 TCACACTTAG TGGCATTTCT TTTGCTATCT CTTTTAATAT TCTTGTCCAC ATTATTCTTT 56159 .......... .......... .......... .......... .......... .......... 348 TTTTCCCTCT AGCTAAAATA GAGTGATGAA CAATTAGGCA TTATAAATAG AGAATTTGCT 56099 ||||||| .......... ..CTAAAAT. .......... .......... .......... .......... 355 TTTAGTAGAT CAAATTGTGA TTTATTTTTT GATTTTTGGT TGCTTTCATT GAATCTTTTA 56039 .......... .......... .......... .......... .......... .......... 355 ATGTATTTAG TTGATTTTAA TTCTTAAATT AATGTATACT TGATTTGTTT CACCTTTACA 55979 .......... .......... .......... .......... .......... .......... 355 ATTCATTACA ATTTTATCGT GTATAATATA TTCTTTTCAA ATATTAACTT TTATACATAA 55919 .......... .......... .......... .......... .......... .......... 355 TCCTAATTTA TTGTACACAA ATTAGTATAT ATCGTGTTAC TAGTTATGTA TTGGATATAC 55859 .......... .......... .......... .......... .......... .......... 355 AAATATTACA AATTTCATTT TCTTTTACTA CCAATACATA CACCCAACTT TATTCAACTA 55799 .......... .......... .......... .......... .......... .......... 355 GTAGAAGACT ATTATTTCTA GGGAAAAGGG TCCGATATAC CCTCAACTTT ATCATTTAGA 55739 .......... .......... .......... .......... .......... .......... 355 GCTCATATAC CCCTTGTTAT GAAATTGACT CATATATACT CCTACTTGTA AACAAATGGC 55679 .......... .......... .......... .......... .......... .......... 355 TCAAATATAT CCTTTTCCTT TAACGGAAAT GAAAAAAAAA ATAATTTTAA TCTAAATTTT 55619 .......... .......... .......... .......... .......... .......... 355 TATTATTTTT TTTCTAAAAA AATATAATCC CATATAAGTA AATTTAATGC TCGTCAAATA 55559 .......... .......... .......... .......... .......... .......... 355 TATTTTTTTG ACTTTTTTTT GTTTCAATGA CTAATTTATA ATTATTCTTT TGATAATCAA 55499 .......... .......... .......... .......... .......... .......... 355 ATTTATTTAT GTTTCATTAA TATTCTTGTA AAACTTATTG TAGATGACCA AATTTTTTCT 55439 .......... .......... .......... .......... .......... .......... 355 TCGAATACGA AATTAAATTA CAAAACACAC AAAAAAAATA GTTTAATTTT TTATTCTTTA 55379 .......... .......... .......... .......... .......... .......... 355 AACTAAGGAA TGAAAGAAAA AGCAAAATAA GAATAAGAAA TTCAAATAAT TATAATAAAA 55319 .......... .......... .......... .......... .......... .......... 355 GAAGTCAAAA AATAATTTAT GTATGAAAAA AATTAAAATA TACTTTGAAC TTTGATAGAA 55259 .......... .......... .......... .......... .......... .......... 355 GAATCATATA TACCCCTAAA TTTTTTTTTA AAAAAAAATT AGAAGTAATA AATATAAATT 55199 .......... .......... .......... .......... .......... .......... 355 TAAAACTAAT TTTTTTAAAT TCGTTAAATG AAGGGTATAT GTGAGCCATT TCGTAATGGC 55139 .......... .......... .......... .......... .......... .......... 355 AGGGGTATAT GTGAGCCATT TGTATAACGG TATGGGCATA TATGAGCCAC TTTTATAACG 55079 .......... .......... .......... .......... .......... .......... 355 AGGGGTATAT CAGCTCCAAA TGACAAAGTT GAGAGGTATA TCAGACCTTT TTCCCTTATT 55019 .......... .......... .......... .......... .......... .......... 355 TCTAAAATGA AAGTCTAGAG TTCGCTTGAA TTGACTTAAA AGTTGATCAA ATCTACTTTT 54959 .......... .......... .......... .......... .......... .......... 355 AAAGTCCTGT TTTATTTTTT ATTTTTGAGA GTTTTGACAA AGCAGAAAAT AACTTATAAT 54899 .......... .......... .......... .......... .......... .......... 355 AAGTTAGAGA TGACTTTAAA AAAAAGTTAA AAATTACAAG TAGCTACTTC CTTACTTTTC 54839 .......... .......... .......... .......... .......... .......... 355 ATTTTTTAAC TTAAAAGTTA CTAAAGTTTA ACTTTTAAAA AAATAAGGAA AAAAGTCTGA 54779 .......... .......... .......... .......... .......... .......... 355 AATATATATC AACTTTGACC GAAATTATAT TAACGATATC AAACTTTGGA AATGACCTTT 54719 .......... .......... .......... .......... .......... .......... 355 TACCCCTGTA CTATTTAATA GTGTATTTTA AAGGTATATA TGTATCCACG TGAACATCAC 54659 .......... .......... .......... .......... .......... .......... 355 AAATATTCCA TCATTAAAAA TAGAAAGTCA TCATAAAATT TGATATGTAA CAATAATTTC 54599 .......... .......... .......... .......... .......... .......... 355 GACCAAAATT GAGATATTTT TCAGACCCTT TTTTCAAAAA ATACTTTTTA TGACAAGAAA 54539 .......... .......... .......... .......... .......... .......... 355 GTACCTGGGA TGTTGAGTCG TTGACGCTAA ACTTATTATT AATATGACAA GAAAAAATAG 54479 .......... .......... .......... .......... .......... .......... 355 TCCTATGAGT TTCCTGGAAA ATACATTGTA ATTAATTCAC ATGGGCACTT TTTATTTTTT 54419 .......... .......... .......... .......... .......... .......... 355 TTTAAACATA TTGTGGCCAA CTGAGAAATT ATAGTTAGGA TTTTAAATTG GATTTTTATT 54359 .......... .......... .......... .......... .......... .......... 355 TCATATATCC ATTTAAAAAT AATTCAATAT ACTCCATAAC TATAATTTGA TAATTACGAT 54299 .......... .......... .......... .......... .......... .......... 355 TTGTAGCTAT ATATAAG 54282 || | ||||| ......GTAA AAATAAG 366 hqPGS_C08HBa0165B06.1-_SGN-E237320- (57957 57640,57508 57474) ******************************************************************************** EST sequence 40 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 53998 to 60909): Exon 1 57635 58030 ( 396 n); cDNA 132 523 ( 392 n); score: 0.856 Intron 1 58031 58295 ( 265 n); Pd: 0.855 (s: 0.84), Pa: 0.000 (s: 0.92) Exon 2 58296 58571 ( 276 n); cDNA 524 799 ( 276 n); score: 0.851 PPA cDNA 31 13 MATCH C08HBa0165B06.1+ SGN-E548357+ 0.854 672 0.841 C PGS_C08HBa0165B06.1+_SGN-E548357+ (57635 58030,58296 58571) Alignment (genomic DNA sequence = upper lines): CAGACACAAC TGCAATTGGA CTTCTCACTG AGTGCCTATT AGAAGTCCAC TTCAAGAATC 57694 || | ||| |||||||||| ||||| || | |||||||||| |||| ||||| ||||| |||| CACTC-TAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC TTCAAAAATC 190 CCTCAATAAC CTCAGGGTTT GAGCTATTAG TTGTCTTGGA AAATGTCACT TGGTATGTCA 57754 |||||| | | | || ||| |||||| ||||||||| |||| ||||| || ||||||| CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT TGATATGTCA 250 ACTTCTGGTT CAACTCGGAG AAATTTAGCT CGGAGGGTTC AACTTCGATG GCAACGCCTT 57814 |||||||||| |||| ||| ||||||||| |||||||||| ||||| | | |||| |||| ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG ACAACTCCTT 310 CTGGTGAAGC TACCTCCACT TTGTAAGATG ATGTAGCATC ACCAACATTG GTTACAGTTC 57874 ||||||| | || ||||||| |||||||||| || ||||||| |||||||||| ||||| |||| TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG GTTACGGTTC 370 TGGTATATGT CTGAGGAGTT GATCCAAGTC CAAATATGGA AAACGAAGGA TAGTTTAATT 57934 |||||||||| |||||||||| ||||||||| | ||||| ||| |||||| || |||| || TGGTATATGT CTGAGGAGTT GATCCAAGT- C--TGATGGA AAATGAAGGA TAATTTAGTT 427 GTGCTTCAAG GATACTTTTC ACCTCCGAGC AATTCACCCT GCGTTGTATC AGGTTACCTA 57994 | ||||| | ||||| ||| |||||||||| |||||||| | |||||||| | | ||||||| GCCCTTCAGG GATACGTTTT ACCTCCGAGC AATTCACCTT GCGTTGTAAC ACTTTACCTA 487 CCTGTTGATC TGTGTACTTC AAACCACATA AATAAGGTAC ATAGTCCTCG AATGGTGTAT 58054 ||| ||| |||||| ||| |||||||||| |||||| CCTCCCGATT TGTGTAGTTC AAACCACATA AATAAG.... .......... .......... 523 CATAAACTAG TCCTGGATCA TTTGCCCTTG ATGGATTAAC ATGTCCTGCA CCAATTGCAT 58114 .......... .......... .......... .......... .......... .......... 523 AGATGTCAGC AGGAAGGAGC CTTTCATCGA GTATTGGACT ATTAGCAAGG TTTAACGTGT 58174 .......... .......... .......... .......... .......... .......... 523 CAGCCGTTGT CATCATTGCA GACTTAATAA CAGCAGGAGA CCAATCAGGA TGTGTGCATT 58234 .......... .......... .......... .......... .......... .......... 523 TCAGCAGAGC TGCTACGCCA CTAAGGTGAG GGCAAGACAT TGAGGTGCCT GATATGATAT 58294 .......... .......... .......... .......... .......... .......... 523 TGAATGTGGA TTTGGTGTTC TTGTTGTCAT CCACGGAGGT AGGCCAAGCA GCAAGGATAT 58354 |||||| || ||| ||||| ||||||| || |||||||||| |||||||||| ||||||| | .GAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA GCAAGGACGT 582 TAGCACCAGG ACCGATTATG TCAGGCTTCA AGATTCCAGG ACTAGCTCTA CTTGGTCCTC 58414 || ||||||| |||||||||| ||||| || | |||| ||||| ||| ||| |||||||||| TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACTTGCTACG CTTGGTCCTC 642 TTGAGGAAAA TGCAGCAACC ATAGGAGCAT TTTTGTCTCC AATTATTGTT CCTTGGAATG 58474 ||||||||| || |||||| |||||||||| |||||||||| ||||| ||| || ||||| | GTGAGGAAAA TGAAGCAACT ATAGGAGCAT TTTTGTCTCC AATTACAGTT CCATGGAAGG 702 CAATTGTAGC AACAGGGCTT GATGTTGAGT TCATGTAAGC AAGAATTTTT GTTCCGTCTG 58534 |||| ||| ||| || || || | ||||| |||| || || ||||||||| |||| || | TGATTGAAGC AACCGGATTT GAAGATGAGT TCATATAGGC AAGAATTTTC TTTCCATCAG 762 CAGCTGAAAC AACCAATGCT GGAAGAACAT GAGCATC 58571 || |||||| | ||||||| ||||| |||| |||| || CATTTGAAAC ATCCAATGCA GGAAGGACAT GAGCTTC 799 hqPGS_C08HBa0165B06.1+_SGN-E548357+ (57635 58030,58296 58571) ******************************************************************************** EST sequence 281 -strand 446 n (File: SGN-E353214-) 1 TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 61 ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 121 ACCGCTCAGT GATGAGCTGT TCACCAGAGT GGAGGAACGA GCCACGTGTC ATGCAAAAGA 181 GCTTCTTCAG AATCTTCAGT TTTTTCATAT TGTTGCTTCA CTTTCTCTTG TGTAGAGATT 241 TGAATGTTTA ATTAGTAGAA TTTTCAAAAG AGAGACAAAG AGGCTCTAGT GAAAGTCTAT 301 ATGTCTCTCA TGTATTAGAA TGAAATATTG TTAGAGAAAT TAAGACTGAC TTGTAGTTTG 361 GTTTGGTTGA TAATATATGA TCGGTAAAAA TTAAATGTTT AAATTTGTGA TTTAACCAAA 421 AAAAAAAAAA AAAAAAAAAA AAACTC Predicted gene structure (within gDNA segment 56973 to 61535): Exon 1 57583 57705 ( 123 n); cDNA 1 123 ( 123 n); score: 1.000 PPA cDNA 418 444 MATCH C08HBa0165B06.1+ SGN-E353214- 1.000 123 0.276 C PGS_C08HBa0165B06.1+_SGN-E353214- (57583 57705) Alignment (genomic DNA sequence = upper lines): TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 57642 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 60 ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 57702 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 120 ACC 57705 ||| ACC 123 hqPGS_C08HBa0165B06.1+_SGN-E353214- (57583 57705) ******************************************************************************** EST sequence 319 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 56682 to 59394): Exon 1 57619 58020 ( 402 n); cDNA 40 441 ( 402 n); score: 0.873 PPA cDNA 11 1 MATCH C08HBa0165B06.1+ SGN-E307529- 0.873 402 0.912 C PGS_C08HBa0165B06.1+_SGN-E307529- (57619 58020) Alignment (genomic DNA sequence = upper lines): CCAATTTTTG ACTAGGCAGA CACAACTGCA ATTGGACTTC TCACTGAGTG CCTATTAGAA 57678 ||||||||| ||||| | | ||||||||| |||||||||| |||| ||||| |||| ||||| CCAATTTTTC ACTAGACCAA TACAACTGCA ATTGGACTTC TCACAGAGTG CCTAGTAGAA 99 GTCCACTTCA AGAATCCCTC AATAACCTCA GGGTTTGAGC TATTAGTTGT CTTGGAAAAT 57738 |||||||||| |||||||||| || |||| || | ||| | | | ||||| |||||||||| GTCCACTTCA AGAATCCCTC AACAACCACA ACTTCTGAAC TGCTGGTTGT CTTGGAAAAT 159 GTCACTTGGT ATGTCAACTT CTGGTTCAAC TCGGAGAAAT TTAGCTCGGA GGGTTCAACT 57798 |||||||||| |||| ||||| |||||||||| | |||||||| |||| || | |||| ||||| GTCACTTGGT ATGTTAACTT CTGGTTCAAC TTGGAGAAAT TTAGTTCTGT GGGTACAACT 219 TCGATGGCAA CGCCTTCTGG TGAAGCTACC TCCACTTTGT AAGATGATGT AGCATCACCA 57858 || ||||||| | ||| || |||||||| | |||||||||| ||||||||| | |||||||| TCTATGGCAA CTCCTATAGG TGAAGCTATC TCCACTTTGT AAGATGATGC AACATCACCA 279 ACATTGGTTA CAGTTCTGGT ATATGTCTGA GGAGTTGATC CAAGTCCAAA TATGGAAAAC 57918 || ||||| | ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| ACGTTGGTCA CAGTTCTTGT GTATGTCTGA GGAGTTGATC CAAGTCCAAA TATGGAAAAC 339 GAAGGATAGT TTAATTGTGC TTCAAGGATA CTTTTCACCT CCGAGCAATT CACCCTGCGT 57978 |||||||||| |||||| ||| |||| ||||| || || || | | ||||||| ||| ||||| GAAGGATAGT TTAATTCTGC TTCAGGGATA CTCTTTACTT CTAAGCAATT TACCTTGCGT 399 TGTATCAGGT TACCTACCTG TTGATCTGTG TACTTCAAAC CA 58020 |||| ||| | ||| |||||| | || |||| ||| |||||| || TGTAACAGTT TACTTACCTG TGCATTTGTG TACCTCAAAC CA 441 hqPGS_C08HBa0165B06.1+_SGN-E307529- (57619 58020) ******************************************************************************** EST sequence 343 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 55340 to 58869): Exon 1 57660 58229 ( 570 n); cDNA 1 570 ( 570 n); score: 0.895 MATCH C08HBa0165B06.1+ SGN-E207413- 0.895 570 0.993 C PGS_C08HBa0165B06.1+_SGN-E207413- (57660 58229) Alignment (genomic DNA sequence = upper lines): CACTGAGTGC CTATTAGAAG TCCACTTCAA GAATCCCTCA ATAACCTCAG GGTTTGAGCT 57719 ||| |||||| || |||||| |||||||||| |||||||||| | |||| ||| ||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 ATTAGTTGTC TTGGAAAATG TCACTTGGTA TGTCAACTTC TGGTTCAACT CGGAGAAATT 57779 ||| ||||| |||||||||| |||||||||| ||| | |||| |||||||||| | |||||||| GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 TAGCTCGGAG GGTTCAACTT CGATGGCAAC GCCTTCTGGT GAAGCTACCT CCACTTTGTA 57839 ||||| | | || | ||||| | | |||| ||||| ||| ||||||| || ||| |||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATGTA GCATCACCAA CATTGGTTAC AGTTCTGGTA TATGTCTGAG GAGTTGATCC 57899 ||||||| | |||||||||| ||||||| || ||||||||| |||||||||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTGTGCT TCAAGGATAC TTTTCACCTC 57959 ||||| || ||| |||| | |||||||||| |||||||||| ||| |||||| ||| ||||| AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 300 CGAGCAATTC ACCCTGCGTT GTATCAGGTT ACCTACCTGT TGATCTGTGT ACTTCAAACC 58019 |||||||||| ||||||||| ||| || || |||||||||| ||| ||||| | |||||||| CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 360 ACATAAATAA GGTACATAGT CCTCGAATGG TGTATCATAA ACTAGTCCTG GATCATTTGC 58079 |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| |||||||||| ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 420 CCTTGATGGA TTAACATGTC CTGCACCAAT TGCATAGATG TCAGCAGGAA GGAGCCTTTC 58139 ||| |||||| |||||||||| ||||||| || ||||||||| ||||||||| ||||||||| CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 480 ATCGAGTATT GGACTATTAG CAAGGTTTAA CGTGTCAGCC GTTGTCATCA TTGCAGACTT 58199 ||||||||| |||||| | | |||||||||| |||||||| |||||||||| |||||||||| GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 540 AATAACAGCA GGAGACCAAT CAGGATGTGT 58229 |||||||||| |||||||||| |||||||||| AATAACAGCA GGAGACCAAT CAGGATGTGT 570 hqPGS_C08HBa0165B06.1+_SGN-E207413- (57660 58229) ******************************************************************************** EST sequence 104 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 57164 to 59307): Exon 1 57764 58206 ( 443 n); cDNA 1 443 ( 443 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E287935+ 1.000 443 0.899 C PGS_C08HBa0165B06.1+_SGN-E287935+ (57764 58206) Alignment (genomic DNA sequence = upper lines): TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 57823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 57883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 57943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 58003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 58063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 58123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 58183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATCATTGC AGACTTAATA ACA 58206 |||||||||| |||||||||| ||| TCATCATTGC AGACTTAATA ACA 443 hqPGS_C08HBa0165B06.1+_SGN-E287935+ (57764 58206) ******************************************************************************** EST sequence 399 -strand 435 n (File: SGN-E208810-) 1 CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 61 GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 121 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 181 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 241 GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 301 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 361 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 421 CCGAGAGCAA TACTT Predicted gene structure (within gDNA segment 57454 to 66081): Exon 1 58588 58887 ( 300 n); cDNA 1 303 ( 303 n); score: 0.922 Intron 1 58888 65060 (6173 n); Pd: 0.000 (s: 0.94), Pa: 0.150 (s: 0.94) Exon 2 65061 65192 ( 132 n); cDNA 304 434 ( 131 n); score: 0.909 MATCH C08HBa0165B06.1+ SGN-E208810- 0.918 432 0.993 C PGS_C08HBa0165B06.1+_SGN-E208810- (58588 58887,65061 65192) Alignment (genomic DNA sequence = upper lines): CCATATTGTG ATGGGTTGAT GATAATCATG -CCAACACCT CCAGCATCCT TCACA-GCTT 58645 |||||||||| |||||||||| || ||||||| ||||||||| ||||||||| | ||| | || CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 60 GTCCTTTATC AACATTGGCT ACATGGCCGA GT-GCTGAAC ATAATACTAT CTTTCCTCTT 58704 |||||||||| |||||||||| ||| ||||| | ||| ||| |||||||||| ||||||| || GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 120 ATAGCAGGGT CAGTGAGTGA ACCTCGTCTG CAATAAGGGG TTTCGGATGG ATCTTTTGCA 58764 |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 180 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGCGTTGG AAATCTTTGG ACGATAAGCA 58824 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 240 GATTCTCCTT CAAATTCCTC TCCATTTCCA AGCTTAACAG TAGCTTTTAT CTTTCTGTCA 58884 |||| ||||| |||||||||| ||||||||| |||||| ||| |||||||||| |||||| ||| GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 300 AGCGTGCTGG CACCTACCGT AAGAATCCAA GGGGCGGTGT TTACTGCTGT GATAAAGGAT 58944 ||| AGC....... .......... .......... .......... .......... .......... 303 GGACCACTAT TTCCAGCAGA ACAACTTACA AGAATTCCTC TTTCCGTTGC ACTGTACGCC 59004 .......... .......... .......... .......... .......... .......... 303 CCGATAGCAA TATTGTCTCT ATGGAAAGGG ATTGGACCTC CACTAAGGGA CATTGAAAGA 59064 .......... .......... .......... .......... .......... .......... 303 ATATCTACTC CATCATCTAT AGCTGAATCC ATGGCAGCTA AAACATCACT TTCAGAACAA 59124 .......... .......... .......... .......... .......... .......... 303 CCAACAGAAT TACACACCTT ATATATGGCT ATATGGGCTA GAGGAGCAAC ACCAACTGCA 59184 .......... .......... .......... .......... .......... .......... 303 GTTCCATCAG CATTGCCATA TACATTAGCA CCTTTCACAA AGGCTCCTGC AGCTGTGCTT 59244 .......... .......... .......... .......... .......... .......... 303 GCTGTGTGTG TACCATGTCC AATACTATCT ATCGGGGAAC CATTACCAAG TTGGTAAGAC 59304 .......... .......... .......... .......... .......... .......... 303 CTGGCTCCAA TGAGCTTGTT GTTACACTTA TTGGTGAAAT TGGACTCACA AACTCCTTTC 59364 .......... .......... .......... .......... .......... .......... 303 CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAAAG AAGGATGGTC AGGAATAATT 59424 .......... .......... .......... .......... .......... .......... 303 CCAGTGTCTA TAACTCCGAT GATCACGCCT TTCCCATAGT TGGAATCCTT CCATACACCC 59484 .......... .......... .......... .......... .......... .......... 303 ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG TGTGCAAAGA CAAAATCCTC 59544 .......... .......... .......... .......... .......... .......... 303 TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT CCTTCACTTG TTCTGCAGTT 59604 .......... .......... .......... .......... .......... .......... 303 AATCTTGCTG CAAACCCTGT CATCACATTG TGATAGGAAT AGATCATGGT AGCAGCCTCT 59664 .......... .......... .......... .......... .......... .......... 303 TCATTTCCAC TCGAACTAAT TGTGGTAGCA GTTTTAGGCA AAAAAGAAAG GTAATAGCTA 59724 .......... .......... .......... .......... .......... .......... 303 CCTAAATCCG TTAACAATGA TTGAGTAGTA ACTAGGCTTT CAGGGGATTC AACATGGACG 59784 .......... .......... .......... .......... .......... .......... 303 ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATTGGA AAGAACAGAA GATGAAAACA 59844 .......... .......... .......... .......... .......... .......... 303 AGAAGGATTT TCAATAATCC CATGGCTAGC TAATACAACA AGTGATGATT TATTTGATGA 59904 .......... .......... .......... .......... .......... .......... 303 ATTTCTCTGC TTTGAAGCAA CTGTCTATTT ATAGTGTTTT ATTATTGACC TATTCAACAT 59964 .......... .......... .......... .......... .......... .......... 303 CTAGAAAAAT TATTGTGGAA AAAAGACATG TGTATGAACA AAATTATCAC TTCTCCAGTA 60024 .......... .......... .......... .......... .......... .......... 303 TCAGAAAATT ATATTCTATG GTTTTATTTT CCAAATGACA TCCACTATAA TATATTTAAT 60084 .......... .......... .......... .......... .......... .......... 303 TTCGTTTTAT CCCTTTAAGG AAAAAAGCTC AAATTTGTTG TTAAACTTGT GGAAAAAGCT 60144 .......... .......... .......... .......... .......... .......... 303 CGTATATGAC ATTCTTTTAA AGTTTGACTT ATTTATGTCA TTTTCAATTG AGAAACACGA 60204 .......... .......... .......... .......... .......... .......... 303 GCGAAAAAAG AAGAGAGGCG ACCGAGATAT CTAGATATAT GTGAATCATC CCCATAAACA 60264 .......... .......... .......... .......... .......... .......... 303 TCATGAGAAT CGTATTAAGT ACATGTATAC CAGAGATACA GGAAGAGAGG CAAGCGAGAG 60324 .......... .......... .......... .......... .......... .......... 303 AGGACAGTGG TGATCGACAT AAGAAAATGG CGAATGAGAT AATTAGATAA ATGTAAATCC 60384 .......... .......... .......... .......... .......... .......... 303 ACGAAAAATT ACACTTAATT TTGACTCGAT ATTTCATTTG AACTTTTAAA TTATTACTGA 60444 .......... .......... .......... .......... .......... .......... 303 TCATAATAAT TATGGCGTAT TCTAATCATC AAACTCATTT AACTAACAAA AGTTGACCCA 60504 .......... .......... .......... .......... .......... .......... 303 AGACCTAATA TCCCAACACA ACTTAAACTT TTATTAATTT TGTGCTGTGT TTTTATATGT 60564 .......... .......... .......... .......... .......... .......... 303 CGAAATCCAT ATTTATCTAT TTATTCCTTT AAATTGCAGA AATTATTAGA GATAATTGGC 60624 .......... .......... .......... .......... .......... .......... 303 ACTACATTTC AGTCCACCTG ATTACTTGTG GGGGCACAAA GGACCAACAG GGGCTGCTGG 60684 .......... .......... .......... .......... .......... .......... 303 AAAAAAATAT TGTTTTTATA TGTGGAAATC CAAGGAATGA AATTAAAATT AGTGGATGGA 60744 .......... .......... .......... .......... .......... .......... 303 TAGATAATAT ATGTATTTAA TTCATGAATA ATAAGTGTAT AATTAATAAT ATAATCTATG 60804 .......... .......... .......... .......... .......... .......... 303 TATATCAAAA ATGGAAAGTA AACAATGAAT TCAATCAATT ATTTGTGTTA AAAAAAATTT 60864 .......... .......... .......... .......... .......... .......... 303 TGTTCTTTTT CCCCTTTCTT TGGGGCACGA TACGTATAAA ATTAAGATTC AAGAAAACAC 60924 .......... .......... .......... .......... .......... .......... 303 ATTGTTGAGG AAGATGAACA GATACAATGC ATAAACATTG TACAAACAGA GTATATGGAT 60984 .......... .......... .......... .......... .......... .......... 303 GTATATACAT CTTTGATACA TAGTTATACA TCATATATAC ATAATTATAC AATATTGTTA 61044 .......... .......... .......... .......... .......... .......... 303 CATTGCATAA GGCCCTCCCT TTACGATCTT GGGCAGTGTC TCCTCATGAG CTATTTTGTG 61104 .......... .......... .......... .......... .......... .......... 303 GCCGAGTTAG GACTAAGATA AGTTCTTTTA TCATTATATT TATTACACTC AAATCCATTC 61164 .......... .......... .......... .......... .......... .......... 303 TAATTTTTGA TTTATTAAAT TTCATTTGGC GTGCAGAAAG GGGTTAATTA AAAATGAAAA 61224 .......... .......... .......... .......... .......... .......... 303 ATTTTCTTTA TGCGAATTTG AACAATCCTT ACTCTATTAA TTATTGTAAG GGTTTAGGTA 61284 .......... .......... .......... .......... .......... .......... 303 GGGAAAATTC CAAAATTCAT TTCTTATTAC ATTATATTTT GGCTTTGGTA ATCAGTAGCA 61344 .......... .......... .......... .......... .......... .......... 303 AAACATGAAT TTTCATTAAA AATAATCAAA ATATAAAAAA TCAAGAAAAT TCTCCACACG 61404 .......... .......... .......... .......... .......... .......... 303 TATTATAATT AAACCACCAA TCTATCCATC TAATTTTCCA CGAAAAAGTG TCACAACAAA 61464 .......... .......... .......... .......... .......... .......... 303 GTGGTCCACG ACCTTTCATG ATCCACTTTA TCTCAATCAA ACAACTATAT GTTTTTAGTT 61524 .......... .......... .......... .......... .......... .......... 303 TTTTTTAAGC TTCACTATTA AGTATTTATC GTCCACTAAT TCGATTAAAA TCAGATTCAC 61584 .......... .......... .......... .......... .......... .......... 303 ATATATTGCT TTGTCCTTAT AAGACTATCA ACGTTAACTT AATTTCATTT TCCTCCACAC 61644 .......... .......... .......... .......... .......... .......... 303 CCGCTATTCG AATCGACATA ATTTAAGTAT CTATAGAAGG GAAGGGGTTG TCAATAATAG 61704 .......... .......... .......... .......... .......... .......... 303 TGACAAGGTC ATATGATTTT CACAAAAAAA AAATTAACGT AAAAAAAAAT TAACCTCATA 61764 .......... .......... .......... .......... .......... .......... 303 TATATAATAT AATTTTTTCA CCAAAAGATA CTCAAATGAA TTTCTTGCAA TTATTTGATT 61824 .......... .......... .......... .......... .......... .......... 303 CCGCCTCTAT TGTTAAAATG TGCCCTCTAT TACACGTTAA AACTCACAAT GAGACATTTT 61884 .......... .......... .......... .......... .......... .......... 303 AATGTTATAG TGTGGAAAAA AAAAAGTCAT GATTGAAAGA GAAAGTATGT AGAATTATTT 61944 .......... .......... .......... .......... .......... .......... 303 TACACAAATA ATAGACTAGT TGATTTCATT ATTTCCATAA AAAATAAAGG AAAGTAATGA 62004 .......... .......... .......... .......... .......... .......... 303 CCACGTCAAA AGTGTGATTA ACAAGCCTGT CCTAGCAGTA AAGGTAAAGT CGAGATTAAA 62064 .......... .......... .......... .......... .......... .......... 303 AGTTTAAAAT TTGAAATTAA GATTAAAAAA CAATTGTTAA GTATGTTTTT TTTTAAAAAA 62124 .......... .......... .......... .......... .......... .......... 303 ATGAGAAATT TTTGTTGACA GTGGGTCTTA TATTTTTATT TATATTCTTA GTATCATAAT 62184 .......... .......... .......... .......... .......... .......... 303 TATGAACATT ATTCATATTT AAGCAGATTA GTTAAATTTG TGTAAGTTGA GGTGGAAATT 62244 .......... .......... .......... .......... .......... .......... 303 ATGGATTAAA GTCATATATG CCTCGAACTT AACGTAATTT AAACAGTCAA AGTTTAAATG 62304 .......... .......... .......... .......... .......... .......... 303 TGAAACACTC AAAAATCATA CATTTCTTCC CATGGAAATG ATATATCCTC CATTAATAAT 62364 .......... .......... .......... .......... .......... .......... 303 TGAAGTGATT GAAAATTACA TATACAATGA AGGGTATTTT GGTACAGAGT GCGTTCGAAA 62424 .......... .......... .......... .......... .......... .......... 303 GTAAGAAAAT ATTTTTCATG AAAAATAATA TACGAGTGGG ATAGGGTGGG GGAGTATGAT 62484 .......... .......... .......... .......... .......... .......... 303 TAAGGGGTGG AAGGGTGTGG AATGATTATA TATAGGAATG TCCCTGTTAT TTATTTATTT 62544 .......... .......... .......... .......... .......... .......... 303 TTTGTCATAT TAACAAGTTT AGCATCAACG TCCTAATTTA AGTATTGAAT CGAAATTCTC 62604 .......... .......... .......... .......... .......... .......... 303 ACATAGTCAT TCAAGTAATA TTTTTTAAAT TAGTTGGGGG TATACAATGT AAGTATTTAG 62664 .......... .......... .......... .......... .......... .......... 303 TAAGTGTATG AATGTAAAGG GGTATATGTT TGTAATTATT TTATTTTTAT GCTTAGTTAC 62724 .......... .......... .......... .......... .......... .......... 303 GTTAAAATAT TATTATTTTG TAGAAATATT ATTTACTCAT AAATTAATAT TTATTTATTT 62784 .......... .......... .......... .......... .......... .......... 303 TAAAGAGTTA TGTATTGAAA TTCAATGAAG GTTAATTTTG ATTATATTAA AATCATTGTA 62844 .......... .......... .......... .......... .......... .......... 303 TCTTTCTAAT TAACATTGAA TTCACATAAA AGATAAATTT ATTATACATA AAGTACAACG 62904 .......... .......... .......... .......... .......... .......... 303 AATACATCAA TATTATTGTA TCTTATTAAA TTATATAGAA TTCAAATAAA AAATAAATTT 62964 .......... .......... .......... .......... .......... .......... 303 GTTAGTACAG TGTATGTGTA TGATTTATTT AATATATATT TTTTACCTTT GAAACTACTG 63024 .......... .......... .......... .......... .......... .......... 303 GCGTGTAAGA AATACTTATT CCAAACATGT GAGTTAATTA CAACTAGGCC CGGGCATATT 63084 .......... .......... .......... .......... .......... .......... 303 TCGGGATTTT TTTAAATTTC AATATCGGTT TTTTTATTTG ATGGAGCAAT TTTAGTTGTT 63144 .......... .......... .......... .......... .......... .......... 303 CGATTCGATT TTCAATTTTT AACAAAATTA ATTCGATATA ACCGAATACA CGAATTTTAG 63204 .......... .......... .......... .......... .......... .......... 303 CACTACACTA CACTGACAGC CCAGCCTATC CAATGTCAAT AGCCCATTAA AAATTGACCC 63264 .......... .......... .......... .......... .......... .......... 303 AATTTGGCAT TTGAGAGTGA CCCGCTGTAG CTCCTACACT TATGAATTAC GTAATTCCCA 63324 .......... .......... .......... .......... .......... .......... 303 ATTCTGAAAC CCTAAATTGA AACTCTCATG ACTGAAAATT GAACCCTAAA TAATAAACTC 63384 .......... .......... .......... .......... .......... .......... 303 TCACATTTCG AAGATAGAAG TTGAATTGGA GGTAAACTTG TTCAATAACA CTTAATATAG 63444 .......... .......... .......... .......... .......... .......... 303 ACTCAAAAAT TGATAATCTA ATCAAACAGA ACCAAACTAA ATTTATTTTA ATTTGGTTTG 63504 .......... .......... .......... .......... .......... .......... 303 GATTGACATT AATTTCGTAA ACGAAACCGA GCGTGGTCTA ATGTCTTTTC TAGGGAACTC 63564 .......... .......... .......... .......... .......... .......... 303 GTAGGACTTG TTTTTGTTGT CCTACTTCTA AGTTGGTAAA AGAGTCAAAA ATATTTTTTT 63624 .......... .......... .......... .......... .......... .......... 303 CTTAACTTTC ATTTAATAGT GTTATCGTTA TACTATGCGG TCATTCATAT CTTCACCATT 63684 .......... .......... .......... .......... .......... .......... 303 ACGAAACTTT TTCACATGTA CCCAAATTAC TCACATGAAG TAAATAACGA TAAACAAACA 63744 .......... .......... .......... .......... .......... .......... 303 GTATTTTCAG TAAAATAAAA TGTATGAGTA GTTTATGCAC TCGTAAAGCC AATTTTTGAC 63804 .......... .......... .......... .......... .......... .......... 303 TAGGCTAACA CAACTGCAAT TGGACTTCTC ACTGAGTGTC TACTAGAAGT CCATTTCAAG 63864 .......... .......... .......... .......... .......... .......... 303 AATCCATCAA CAATCACAAA GTTTGAGCTG CTAGTTGTCT TGGAAAATGT CACTTGGTAT 63924 .......... .......... .......... .......... .......... .......... 303 GTTAACTTCT GGTTCAACTC GGAGAAATTT AGCTCTGTGG GCTTAACTTC CACGGCAACG 63984 .......... .......... .......... .......... .......... .......... 303 CCTTTTGGTG AAGCTACCTC CACTTTGTAA GATGATGTAG CGTCACCAAC GTTGGTCACA 64044 .......... .......... .......... .......... .......... .......... 303 GTTCTTGTAT ATGTCTGAGG AGTTGATCCA AGTTCAGTTA TGCAAAATGA AGGATAGTTT 64104 .......... .......... .......... .......... .......... .......... 303 AATTGTGCTT CAAGGATAAT TTTCACCTCC GAGCAATTCA CCCTGCGTTG TAACAGGTTA 64164 .......... .......... .......... .......... .......... .......... 303 CCTACCTGTC GATTCGTATA GTTCAAACCA CATAAATAAG GTAGATAGTC CTCAAATGGG 64224 .......... .......... .......... .......... .......... .......... 303 ATATCATAAA CTAGTCCTGG ATCATTTGCC CTCGATGGAT TAACATGTCC TGCACCAGTG 64284 .......... .......... .......... .......... .......... .......... 303 GCAAAAATGT CAGCAGGAAG GAGCCTTTCG TCTAGTATTG GACTATTGGC AAGGTTTAAC 64344 .......... .......... .......... .......... .......... .......... 303 GTGTCAGCAG TTGTCATGAT TGCAGACTTA ATAGCTGCAG GAGACCAATC AGGATGTGTG 64404 .......... .......... .......... .......... .......... .......... 303 CTCTTCAGCA GAGCTGCTAC GCCACTAAGG TGAGGGCAAG ACATTGAGGT GCCTGATATA 64464 .......... .......... .......... .......... .......... .......... 303 ATATTGAATG TGGATTTGGT GTCCTTGTTG TCATCCACGG AGGTAGGCCA AGCAGCAAGG 64524 .......... .......... .......... .......... .......... .......... 303 ATATTAACAC CAGGACCGAT TATGTCAGGT TTCAAGATGC CAGGACTAGC TCTACTTGGT 64584 .......... .......... .......... .......... .......... .......... 303 CCTCTTGAGG AAAATGCAGC AACCATAGGA GCATTTTTAT CTCCAATTAT TGTTCCTTGG 64644 .......... .......... .......... .......... .......... .......... 303 AATGCGATTG TAGCAACAGG GTTTGATGTT GAATTCATAT AAGCAAGGAT TTTTGTTCCA 64704 .......... .......... .......... .......... .......... .......... 303 TCTGCATCTG AAACATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTAACACCG 64764 .......... .......... .......... .......... .......... .......... 303 TCATCTGGAC TGTTGATGAT AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT 64824 .......... .......... .......... .......... .......... .......... 303 TTATCAACAA TGGTTACACC ACCGAATGCT AAACATAACA CTATCTTTCC TCTTATGGCA 64884 .......... .......... .......... .......... .......... .......... 303 GGGTCAGTGA GCGACCCTGG TCTGCAATAA GGGGTTTTAA ATTCATCACT TGCATTTTTT 64944 .......... .......... .......... .......... .......... .......... 303 GCAGCATCAA ATAATGTGAA GAAGGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT 65004 .......... .......... .......... .......... .......... .......... 303 CCTTGAAATT CCTCTCTATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT GTCAAGGGTG 65064 ||| .......... .......... .......... .......... .......... ......-GTG 306 CTGGCACCTA CTGTAAGAAT CCAAGGGGCT GAGTTATCTA CTGAGCCATG GAATGGACCA 65124 |||||||||| |||||||||| |||||||||| |||||||||| |||| || | | |||||| CTGGCACCTA CTGTAAGAAT CCAAGGGGCT GAGTTATCTA GTGAGGCAGG CGAAGGACCA 366 TCATTGCCTG CTGAGCAACT AACAAGAATG CCTCTTTCTG TTGCACTGTA TGCCCCCATA 65184 | |||||||| |||||||||| |||||||||| ||||||| || |||||||||| ||||| | | TTATTGCCTG CTGAGCAACT AACAAGAATG CCTCTTTGTG TTGCACTGTA CGCCCCGAGA 426 GCAATACT 65192 |||||||| GCAATACT 434 hqPGS_C08HBa0165B06.1+_SGN-E208810- (58588 58887,65061 65192) ******************************************************************************** EST sequence 218 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 57170 to 64568): Exon 1 57870 58577 ( 708 n); cDNA 1 708 ( 708 n); score: 0.900 MATCH C08HBa0165B06.1+ SGN-E213673- 0.900 708 1.000 C PGS_C08HBa0165B06.1+_SGN-E213673- (57870 58577) Alignment (genomic DNA sequence = upper lines): AGTTCTGGTA TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT 57929 ||||||||| |||||||||| |||||||||| ||||| || ||| ||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAAGGATAC TTTTCACCTC CGAGCAATTC ACCCTGCGTT GTATCAGGTT 57989 |||||||||| ||| |||||| ||| ||||| |||||||||| ||||||||| ||| || || TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTGT TGATCTGTGT ACTTCAAACC ACATAAATAA GGTACATAGT CCTCGAATGG 58049 |||||||||| ||| ||||| | |||||||| |||||||||| |||||||| | |||| ||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 TGTATCATAA ACTAGTCCTG GATCATTTGC CCTTGATGGA TTAACATGTC CTGCACCAAT 58109 ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| ||||||| || GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 TGCATAGATG TCAGCAGGAA GGAGCCTTTC ATCGAGTATT GGACTATTAG CAAGGTTTAA 58169 ||||||||| ||||||||| ||||||||| ||||||||| |||||| | | |||||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 CGTGTCAGCC GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 58229 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 GCATTTCAGC AGAGCTGCTA CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT 58289 | |||||| |||||||||| | |||||||| ||| |||||| ||||| |||| |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 GATATTGAAT GTGGATTTGG TGTTCTTGTT GTCATCCACG GAGGTAGGCC AAGCAGCAAG 58349 ||||||||| |||||||||| ||| |||||| ||||||||| || ||||||| ||||||| || AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATATTAGCA CCAGGACCGA TTATGTCAGG CTTCAAGATT CCAGGACTAG CTCTACTTGG 58409 ||||||| || |||||||| | |||||||||| |||||||| |||||| ||| | ||||||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCTCTTGAG GAAAATGCAG CAACCATAGG AGCATTTTTG TCTCCAATTA TTGTTCCTTG 58469 ||| | || |||||||||| |||| || || ||||||||| |||||||||| ||||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GAATGCAATT GTAGCAACAG GGCTTGATGT TGAGTTCATG TAAGCAAGAA TTTTTGTTCC 58529 || || ||| |||||||||| || | ||| | |||||| | || ||| ||| |||| |||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 GTCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 58577 ||||||||| |||||||||| |||||||||| |||||||||| |||||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 708 hqPGS_C08HBa0165B06.1+_SGN-E213673- (57870 58577) ******************************************************************************** EST sequence 179 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 56182 to 62876): Exon 1 57890 58523 ( 634 n); cDNA 1 634 ( 634 n); score: 0.897 MATCH C08HBa0165B06.1+ SGN-E213088- 0.897 634 1.000 C PGS_C08HBa0165B06.1+_SGN-E213088- (57890 58523) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTGTGCT TCAAGGATAC 57949 |||||||||| ||||| || ||| |||| | |||||||||| |||||||||| ||| |||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTTCACCTC CGAGCAATTC ACCCTGCGTT GTATCAGGTT ACCTACCTGT TGATCTGTGT 58009 ||| ||||| |||||||||| ||||||||| ||| || || |||||||||| ||| ||||| TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 ACTTCAAACC ACATAAATAA GGTACATAGT CCTCGAATGG TGTATCATAA ACTAGTCCTG 58069 | |||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCATTTGC CCTTGATGGA TTAACATGTC CTGCACCAAT TGCATAGATG TCAGCAGGAA 58129 |||||||||| ||| |||||| |||||||||| ||||||| || ||||||||| ||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 GGAGCCTTTC ATCGAGTATT GGACTATTAG CAAGGTTTAA CGTGTCAGCC GTTGTCATCA 58189 ||||||||| ||||||||| |||||| | | |||||||||| |||||||| |||||||||| GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT GCATTTCAGC AGAGCTGCTA 58249 |||||||||| |||||||||| |||||||||| |||||||||| | |||||| |||||||||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT GATATTGAAT GTGGATTTGG 58309 | |||||||| ||| |||||| ||||| |||| |||||||||| ||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTTCTTGTT GTCATCCACG GAGGTAGGCC AAGCAGCAAG GATATTAGCA CCAGGACCGA 58369 ||| |||||| ||||||||| || ||||||| ||||||| || ||||||| || |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG CTTCAAGATT CCAGGACTAG CTCTACTTGG TCCTCTTGAG GAAAATGCAG 58429 |||||||||| |||||||| |||||| ||| | ||||||| ||| | || |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACCATAGG AGCATTTTTG TCTCCAATTA TTGTTCCTTG GAATGCAATT GTAGCAACAG 58489 |||| || || ||||||||| |||||||||| ||||||||| || || ||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGCTTGATGT TGAGTTCATG TAAGCAAGAA TTTT 58523 || | ||| | |||||| | || ||| ||| |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1+_SGN-E213088- (57890 58523) ******************************************************************************** EST sequence 197 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 57222 to 64616): Exon 1 57994 58697 ( 704 n); cDNA 1 704 ( 704 n); score: 0.913 MATCH C08HBa0165B06.1+ SGN-E212584- 0.913 704 1.000 C PGS_C08HBa0165B06.1+_SGN-E212584- (57994 58697) Alignment (genomic DNA sequence = upper lines): ACCTGTTGAT CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA 58053 |||||| ||| |||||| || |||||||||| |||||||||| |||| ||||| ||||| ||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA 58113 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 TAGATGTCAG CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG 58173 ||||| |||| ||||| |||| ||||| ||| |||||||||| || | ||||| |||||| ||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCCGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTGCAT 58233 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| | TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCTACGCC ACTAAGGTGA GGGCAAGACA TTGAGGTGCC TGATATGATA 58293 |||||||||| ||||||| || ||||||||| |||||||||| | |||||||| |||||| ||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTT CTTGTTGTCA TCCACGGAGG TAGGCCAAGC AGCAAGGATA 58353 |||||||||| ||||||||| |||||||||| ||||| || | |||||||||| ||| |||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAGCACCAG GACCGATTAT GTCAGGCTTC AAGATTCCAG GACTAGCTCT ACTTGGTCCT 58413 ||| |||||| |||| ||||| |||||| ||| ||||| |||| || ||| | | ||||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CTTGAGGAAA ATGCAGCAAC CATAGGAGCA TTTTTGTCTC CAATTATTGT TCCTTGGAAT 58473 | || |||| |||||||||| || |||||| ||||| |||| |||||| ||| |||||||| | CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GCAATTGTAG CAACAGGGCT TGATGTTGAG TTCATGTAAG CAAGAATTTT TGTTCCGTCT 58533 | ||||||| |||||||| | ||| ||||| || | || | || ||||||| |||| ||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 58593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TGTGATGGGT TGATGATAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 58653 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 TCAACATTGG CTACATGGCC GAGTGCTGAA CATAATACTA TCTT 58697 |||||||||| ||||| ||| || |||| || |||||||||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1+_SGN-E212584- (57994 58697) ******************************************************************************** EST sequence 246 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 57232 to 63776): Exon 1 58022 58613 ( 592 n); cDNA 1 592 ( 592 n); score: 0.855 MATCH C08HBa0165B06.1+ SGN-E329031- 0.855 592 1.000 C PGS_C08HBa0165B06.1+_SGN-E329031- (58022 58613) Alignment (genomic DNA sequence = upper lines): ATAAATAAGG TACATAGTCC TCGAATGGTG TATCATAAAC TAGTCCTGGA TCATTTGCCC 58081 |||||||||| | ||||| |||||||||| |||||||||| |||||||||| ||| | | | ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 60 TTGATGGATT AACATGTCCT GCACCAATTG CATAGATGTC AGCAGGAAGG AGCCTTTCAT 58141 | |||||||| |||||||||| ||||| |||| || ||| || ||||| || | |||||||| | TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 120 CGAGTATTGG ACTATTAGCA AGGTTTAACG TGTCAGCCGT TGTCATCATT GCAGACTTAA 58201 | |||||||| ||| || || ||||||| | ||||||| || |||||||||| || ||||||| CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 180 TAACAGCAGG AGACCAATCA GGATGTGTGC ATTTCAGCAG AGCTGCTACG CCACTAAGGT 58261 || | ||||| |||||||||| ||||||| || |||||||| |||||| || |||||||||| TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 240 GAGGGCAAGA CATTGAGGTG CCTGATATGA TATTGAATGT GGATTTGGTG TTCTTGTTGT 58321 |||||||||| ||||||||| || |||| | |||||||||| ||||| ||| || ||||||| GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 300 CATCCACGGA GGTAGGCCAA GCAGCAAGGA TATTAGCACC AGGACCGATT ATGTCAGGCT 58381 ||||||||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||| | TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 360 TCAAGATTCC AGGACTAGCT CTACTTGGTC CTCTTGAGGA AAATGCAGCA ACCATAGGAG 58441 | ||||| || |||||| ||| ||||||| ||| |||||| ||||| |||| || ||||||| TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 420 CATTTTTGTC TCCAATTATT GTTCCTTGGA ATGCAATTGT AGCAACAGGG CTTGATGTTG 58501 |||||||||| |||||||| ||||| |||| | | |||| |||||| || |||| | || CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 480 AGTTCATGTA AGCAAGAATT TTTGTTCCGT CTGCAGCTGA AACAACCAAT GCTGGAAGAA 58561 ||||||| || ||||||||| || |||| | | ||| ||| |||| ||||| || ||||| | AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 540 CATGAGCATC AGCTGATTTA GTGACACCAT ATTGTGATGG GTTGATGATA AT 58613 ||||||| || |||||||||| || ||||| | || | | ||||||| | || CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 592 hqPGS_C08HBa0165B06.1+_SGN-E329031- (58022 58613) ******************************************************************************** EST sequence 416 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 57435 to 59719): Exon 1 58045 58453 ( 409 n); cDNA 1 409 ( 409 n); score: 0.861 MATCH C08HBa0165B06.1+ SGN-E317658- 0.861 409 1.000 C PGS_C08HBa0165B06.1+_SGN-E317658- (58045 58453) Alignment (genomic DNA sequence = upper lines): AATGGTGTAT CATAAACTAG TCCTGGATCA TTTGCCCTTG ATGGATTAAC ATGTCCTGCA 58104 |||||||||| |||||||||| |||||||||| ||| || | |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCAATTGCAT AGATGTCAGC AGGAAGGAGC CTTTCATCGA GTATTGGACT ATTAGCAAGG 58164 || |||||| ||| ||||| | || |||| ||||| || | |||||||||| | | ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAACGTGT CAGCCGTTGT CATCATTGCA GACTTAATAA CAGCAGGAGA CCAATCAGGA 58224 |||| |||| |||| ||||| ||||||||| |||||||| | |||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGTGCATT TCAGCAGAGC TGCTACGCCA CTAAGGTGAG GGCAAGACAT TGAGGTGCCT 58284 |||| || || |||||||||| ||| || ||| |||||||||| ||||| |||| |||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATGATAT TGAATGTGGA TTTGGTGTTC TTGTTGTCAT CCACGGAGGT AGGCCAAGCA 58344 |||| |||| ||||||| || ||| ||||| ||||||| || |||||||||| |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGATAT TAGCACCAGG ACCGATTATG TCAGGCTTCA AGATTCCAGG ACTAGCTCTA 58404 ||||||| | || ||||||| |||||||||| ||||| || | |||| ||||| || ||| GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCTC TTGAGGAAAA TGCAGCAACC ATAGGAGCAT TTTTGTCTC 58453 |||||||||| | ||| ||| || |||| | |||||||||| ||||||||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1+_SGN-E317658- (58045 58453) ******************************************************************************** EST sequence 289 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 56625 to 59852): Exon 1 58108 58715 ( 608 n); cDNA 1 605 ( 605 n); score: 0.865 MATCH C08HBa0165B06.1+ SGN-E308535- 0.865 608 1.005 C PGS_C08HBa0165B06.1+_SGN-E308535- (58108 58715) Alignment (genomic DNA sequence = upper lines): ATTGCATAGA TGTCAGCAGG AAGGAGCCTT TCATCGAGTA TTGGACTATT AGCAAGGTTT 58167 |||||| ||| |||| ||||| ||| | | || ||||| |||| |||||||| | ||||||||| ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 60 AACGTGTCAG CCGTTGTCAT CATTGCAGAC TTAATAACAG CAGGAGACCA ATCAGGATGT 58227 || |||| || | |||||||| ||||||||| |||||| ||| |||||||||| |||||||||| AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 120 GTGCATTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATTGA GGTGCCTGAT 58287 |||| |||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 180 ATGATATTGA ATGTGGATTT GGTGTTCTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 58347 || ||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 240 AGGATATTAG CACCAGGACC GATTATGTCA GGCTTCAAGA TTCCAGGACT AGCTCTACTT 58407 ||||||||| |||||||||| |||||||||| || ||||||| | |||||||| || | || || AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 300 GGTCCTCTTG AGGAAAATGC AGCAACCATA GGAGCATTTT TGTCTCCAAT TATTGTTCCT 58467 ||||| | | | ||||||| |||||| || ||||| |||| |||||||| |||||||||| GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 360 TGGAATGCAA TTGTAGCAAC AGGGCTTGAT GTTGAGTTCA TGTAAGCAAG AATTTTTGTT 58527 ||||||| | || |||| |||| ||||| ||||||| | |||| ||| |||| | || TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 420 CCGTCTGCAG CTGAAACAAC CAATGCTGGA AGAACATGAG CATCAGCTGA TTTAGTGACA 58587 || ||||||| ||||||| | ||| |||||| |||||||||| |||||||||| ||| |||||| CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 480 CCATATTGTG ATGGGTTGAT GATAATCATG CCAACACCTC CAGCATCCTT CACAGCTTGT 58647 |||| || || ||||||| | |||||| |||||||||| |||||||||| |||||||||| CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 540 CCTTTATCAA CATTGGCTAC ATGGCCGAGT GCTGAACATA ATACTATCTT TCCTCTTATA 58707 ||||| ||| | || | || || | | | |||||| |||||||| |||| |||| CCTTTTACAA CCTTAGAAAC GACACC-TG- GAT-AACATA TGACTATCTT TCCTTTTATT 597 GCAGGGTC 58715 |||||||| GCAGGGTC 605 hqPGS_C08HBa0165B06.1+_SGN-E308535- (58108 58715) ******************************************************************************** EST sequence 364 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 57566 to 59438): Exon 1 58176 58838 ( 663 n); cDNA 1 663 ( 663 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E397025- 0.998 663 1.000 C PGS_C08HBa0165B06.1+_SGN-E397025- (58176 58838) Alignment (genomic DNA sequence = upper lines): AGCCGTTGTC ATCATTGCAG ACTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 58235 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 58295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 58355 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 58415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 58475 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 58535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 58595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 58655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 58715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 58775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 58835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 AAA 58838 ||| AAA 663 hqPGS_C08HBa0165B06.1+_SGN-E397025- (58176 58838) ******************************************************************************** EST sequence 170 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 57255 to 61592): Exon 1 58270 58889 ( 620 n); cDNA 1 617 ( 617 n); score: 0.839 MATCH C08HBa0165B06.1+ SGN-E306389- 0.839 620 1.005 C PGS_C08HBa0165B06.1+_SGN-E306389- (58270 58889) Alignment (genomic DNA sequence = upper lines): GACATTGAGG TGCCTGATAT GATATTGAAT GTGGATTTGG TGTTCTTGTT GTCATCCACG 58329 ||||| |||| ||| |||||| ||||||||| |||||||||| | || ||||| |||||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAGGTAGGCC AAGCAGCAAG GATATTAGCA CCAGGACCGA TTATGTCAGG CTTCAAGATT 58389 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAGGACTAG CTCTACTTGG TCCTCTTGAG GAAAATGCAG CAACCATAGG AGCATTTTTG 58449 |||||||||| | || |||| ||| | || ||||||| || |||| || || ||| |||| CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA TTGTTCCTTG GAATGCAATT GTAGCAACAG GGCTTGATGT TGAGTTCATG 58509 |||||||||| |||||||||| ||||| ||| |||| || || ||||| | |||||| | TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAAGCAAGAA TTTTTGTTCC GTCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA 58569 |||| ||||| || | |||| ||||||||| ||||| ||| | |||||||| |||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGATT TAGTGACACC ATATTGTGAT GGGTTGATGA TAATCATGCC AACACCTCCA 58629 |||||||||| | |||||||| || || || |||||||| |||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTCA CAGCTTGTCC TTTATCAACA TTGGCTACAT GGCCGAGTGC TGAACATAAT 58689 |||||||||| |||||||||| ||| |||| || | || || | | | |||||| GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACC-TG-GA T-AACATATG 417 ACTATCTTTC CTCTTATAGC AGGGTCAGTG AGTGAACCTC GTCTGCAATA AGGGGTTTCG 58749 |||||||||| || |||| || |||||||||| ||||| ||| || |||| || |||||||| ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 GATGGATCTT TTGCATTTTT TGCAGCATCA AATAGAGTGA AGAATGTTGC GTTGGAAATC 58809 |||||||| | | ||| || ||||||| | ||||||| ||||| ||| || ||||||| GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TTTGGACGAT AAGCAGATTC TCCTTCAAAT TCCTCTCCAT TTCCAAGCTT AACAGTAGCT 58869 | |||||||| ||| || ||| ||||||||| |||||| || ||||||| | ||||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTATCTTTC TGTCAAGCGT 58889 |||||||||| | ||| || TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1+_SGN-E306389- (58270 58889) ******************************************************************************** EST sequence 225 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 53407 to 59707): Exon 1 58337 59107 ( 771 n); cDNA 1 771 ( 771 n); score: 0.800 MATCH C08HBa0165B06.1+ SGN-E540271- 0.800 771 1.000 C PGS_C08HBa0165B06.1+_SGN-E540271- (58337 59107) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGATATTA GCACCAGGAC CGATTATGTC AGGCTTCAAG ATTCCAGGAC 58396 |||||||||| ||||| ||| ||||||||| |||||||||| ||| || ||| || ||||||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGCTCTACT TGGTCCTCTT GAGGAAAATG CAGCAACCAT AGGAGCATTT TTGTCTCCAA 58456 | ||| || |||||||| | |||||||||| |||||| || |||||||||| |||||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTATTGTTCC TTGGAATGCA ATTGTAGCAA CAGGGCTTGA TGTTGAGTTC ATGTAAGCAA 58516 ||| ||||| ||||| | |||| ||||| | || |||| | ||||||| || || |||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GAATTTTTGT TCCGTCTGCA GCTGAAACAA CCAATGCTGG AAGAACATGA GCATCAGCTG 58576 ||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| || ||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTGAC ACCATATTGT GATGGGTTGA TGATAATCAT GCCAACACCT CCAGCATCCT 58636 ||||||| || ||| | || | | |||| ||| |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TCACAGCTTG TCCTTTATCA ACATTGGCTA CATGGCCGAG TGCTGAACAT AATACTATCT 58696 | || | ||| ||||| | || || || | | | |||| || ||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TTCCTCTTAT AGCAGGGTCA GTGAGTGAAC CTCGTCTGCA ATAAGGGGTT TCGGATGGAT 58756 | ||| | || |||||||||| | ||||| | || | || || | |||| | || ||| TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CTTTTGCATT TTTTGCAGCA TCAAATAGAG TGAAGAATGT TGCGTTGGAA ATCTTTGGAC 58816 | || |||| ||| ||||| ||| |||||| ||||||||| || ||||||| |||||||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTCA AATTCCTCTC CATTTCCAAG CTTAACAGTA GCTTTTATCT 58876 |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| | || | | GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTGTCAAG CGTGCTGGCA CCTACCGTAA GAATCCAAGG GGCGGTGTTT ACTGCTGTGA 58936 |||| ||| | || |||||| || || || | ||||||| || ||| || || | ||| TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 TAAAGGATGG ACCACTATTT CCAGCAGAAC AACTTACAAG AATTCCTCTT TCCGTTGCAC 58996 || || || ||| ||||| || || || |||||||| ||| |||||| || ||||||| CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TGTACGCCCC GATAGCAATA TTGTCTCTAT GGAAAGGGAT TGGACCTCCA CTAAGGGACA 59056 |||||| ||| || ||||||| || || ||||||| | || || |||| | |||||| | TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 720 TTGAAAGAAT ATCTACTCCA TCATCTATAG CTGAATCCAT GGCAGCTAAA A 59107 |||||||||| |||||| ||| |||||||||| ||| |||||| |||||||||| | TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 771 hqPGS_C08HBa0165B06.1+_SGN-E540271- (58337 59107) ******************************************************************************** EST sequence 271 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 56001 to 59300): Exon 1 58339 58700 ( 362 n); cDNA 1 362 ( 362 n); score: 0.903 MATCH C08HBa0165B06.1+ SGN-E200689- 0.903 362 1.000 C PGS_C08HBa0165B06.1+_SGN-E200689- (58339 58700) Alignment (genomic DNA sequence = upper lines): CAAGCAGCAA GGATATTAGC ACCAGGACCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA 58398 |||||||| | |||||||| | ||||||||| |||||||||| | |||||||| |||||| || CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GCTCTACTTG GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT 58458 | | |||||| |||| | || ||||||||| ||||| || | |||||||||| ||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 ATTGTTCCTT GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA 58518 | |||||||| ||| || || |||||||||| ||| | ||| ||||||| | || ||| || ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTTTTGTTC CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 58578 ||||| ||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTGACAC CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC 58638 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 300 ACAGCTTGTC CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT 58698 |||||||||| |||||||||| |||||||||| ||||| || || ||||||| |||||||||| ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 360 CC 58700 || CC 362 hqPGS_C08HBa0165B06.1+_SGN-E200689- (58339 58700) ******************************************************************************** EST sequence 155 -strand 490 n (File: SGN-E282432-) 1 GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 61 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 121 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 181 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 241 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 301 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 361 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 421 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 481 ATCCTTCAAA Predicted gene structure (within gDNA segment 57739 to 59564): Exon 1 58349 58838 ( 490 n); cDNA 1 490 ( 490 n); score: 0.990 MATCH C08HBa0165B06.1+ SGN-E282432- 0.990 490 1.000 C PGS_C08HBa0165B06.1+_SGN-E282432- (58349 58838) Alignment (genomic DNA sequence = upper lines): GGATATTAGC ACCAGGACCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 58408 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 60 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 58468 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 120 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 58528 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 180 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 58588 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 240 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 58648 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 300 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 58708 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 360 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 58768 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 420 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAGATT 58828 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| | TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 480 CTCCTTCAAA 58838 ||||||||| ATCCTTCAAA 490 hqPGS_C08HBa0165B06.1+_SGN-E282432- (58349 58838) ******************************************************************************** EST sequence 376 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 56281 to 59523): Exon 1 58369 58860 ( 492 n); cDNA 3 494 ( 492 n); score: 0.927 MATCH C08HBa0165B06.1+ SGN-E210009- 0.927 492 0.996 C PGS_C08HBa0165B06.1+_SGN-E210009- (58369 58860) Alignment (genomic DNA sequence = upper lines): ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG GTCCTCTTGA GGAAAATGCA 58428 |||||||||| | |||||||| |||||| || | | |||||| |||| | || ||||||||| ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG GTCCGCGAGA AGAAAATGCA 62 GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT GGAATGCAAT TGTAGCAACA 58488 ||||| || | |||||||||| ||||||||| | |||||||| ||| || || |||||||||| GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT GGATTGTGAT TGTAGCAACA 122 GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC CGTCTGCAGC TGAAACAACC 58548 ||| | ||| ||||||| | || ||| || ||||| ||| | |||||||| |||||||||| GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC CATCTGCAGC TGAAACAACC 182 AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 58608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 242 ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA 58668 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA 302 TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGAACCT 58728 ||||| || || ||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CCGCCGAATG CTAAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT 362 CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 58788 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CGTCTGCAAT AAGGGGTTTC AGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 422 AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 58848 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 482 TTTCCAAGCT TA 58860 ||||| |||| || TTTCCGAGCT TA 494 hqPGS_C08HBa0165B06.1+_SGN-E210009- (58369 58860) ******************************************************************************** EST sequence 205 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 57843 to 59707): Exon 1 58453 59107 ( 655 n); cDNA 1 655 ( 655 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E335107- 0.998 655 1.000 C PGS_C08HBa0165B06.1+_SGN-E335107- (58453 59107) Alignment (genomic DNA sequence = upper lines): CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 58512 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 58572 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 58632 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 180 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 58692 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 240 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 58752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 300 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 58812 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 360 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCTTAAC AGTAGCTTTT 58872 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 420 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 58932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 480 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 58992 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 540 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 59052 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 600 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 59107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 655 hqPGS_C08HBa0165B06.1+_SGN-E335107- (58453 59107) ******************************************************************************** EST sequence 392 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 57089 to 60519): Exon 1 58467 59016 ( 550 n); cDNA 1 553 ( 553 n); score: 0.899 MATCH C08HBa0165B06.1+ SGN-E208913- 0.899 550 0.989 C PGS_C08HBa0165B06.1+_SGN-E208913- (58467 59016) Alignment (genomic DNA sequence = upper lines): TTGGAATGCA ATTGTAGCAA CAGGGCTTGA TGTTGAGTTC ATGTAAGCAA GAATTTTTGT 58526 ||||| || |||||||||| ||||| | || | ||||||| | || ||| ||||||| | TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCGTCTGCA GCTGAAACAA CC---AATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 58583 ||| |||||| |||||||||| || ||||| |||||||||| |||||||||| |||||||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 GACACCATAT TGTGATGGGT TGATGATAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 58643 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 180 TTGTCCTTTA TCAACATTGG CTACATGGCC GAGTGCTGAA CATAATACTA TCTTTCCTCT 58703 |||||||||| |||||||||| ||||| ||| || |||| || |||||||||| |||||||||| TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 240 TATAGCAGGG TCAGTGAGTG AACCTCGTCT GCAATAAGGG GTTTCGGATG GATCTTTTGC 58763 |||||||||| |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 300 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGCGTTG GAAATCTTTG GACGATAAGC 58823 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 360 AGATTCTCCT TCAAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTGTC 58883 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| ||||||| || AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 420 AAGCGTGCTG GCACCTACCG TAAGAATCCA AGGGGCGGTG TTTACTGCTG TGATAAAGGA 58943 |||||||||| |||||||| | |||||||||| |||||| | | || || ||| | | || AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 480 TGGACCACTA TTTCCAGCAG AACAACTTAC AAGAATTCCT CTTTCCGTTG CACTGTACGC 59003 |||||| || || || || | | ||||| || |||||| ||| |||| |||| |||||||||| AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 540 CCCGATAGCA ATA 59016 ||||| |||| ||| CCCGAGAGCA ATA 553 hqPGS_C08HBa0165B06.1+_SGN-E208913- (58467 59016) ******************************************************************************** EST sequence 253 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 55327 to 59859): Exon 1 58531 59106 ( 576 n); cDNA 3 578 ( 576 n); score: 0.778 MATCH C08HBa0165B06.1+ SGN-E286017- 0.778 576 0.997 C PGS_C08HBa0165B06.1+_SGN-E286017- (58531 59106) Alignment (genomic DNA sequence = upper lines): TCTGCAGCTG AAACAACCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTGACACCA 58590 || ||| || ||||| |||| ||| ||||| |||||||| | ||| |||||| ||| ||||| TCAGCATTTG AAACATCCAA TGCAGGAAGG ACATGAGCTT CAGTTGATTT AGTCACACCC 62 TATTGTGATG GGTTGATGAT AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT 58650 | || | | ||||||| |||||||||| |||||||||| ||||||| || | ||||||| TCTTCTTGTT CATTGATGAG AATCATGCCA ACACCTCCAG CATCCTTTAC GGATTGTCCT 122 TTATCAACAT TGGCTACATG GCCGAGTGCT GAACATAATA CTATCTTTCC TCTTATAGCA 58710 | | |||| || | | | |||| || | ||||||| || | | |||||| TGAGCAACTC TGAGAAGACT TATACTTCGC AAACACAAGA CTATCTTACC TTTGATAGCA 182 GGGTCAGTGA GTGAACCTCG TCTGCAATAA GGGGTTTCGG ATGGATCTTT TGCATTTTTT 58770 |||||| | | |||| ||| | || ||| || || | || |||| | | |||| ||| GGGTCATTAA GTGAGCCTGG ACTACAAAAA GGCGCGCTAA ATTGATCACT TTCATTCTTT 242 GCAGCATCAA ATAGAGTGAA GAATGTTGCG TTGGAAATCT TTGGACGATA AGCAGATTCT 58830 |||||||| |||||| ||| |||||||| | |||||| ||| ||||| |||| |||||||||| CCAGCATCAT ATAGAGGGAA GAATGTTGAG TTGGAAGTCT TTGGATGATA AGCAGATTCT 302 CCTTCAAATT CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT GTCAAGCGTG 58890 |||||||||| |||| | ||| |||||||||| |||||| | | | | ||||| ||| | || CCTTCAAATT CCTCGCTATT TCCAAGCTTA ACAGTAACCT TCAGTTTTCT ATCATGAGTA 362 CTGGCACCTA CCGTAAGAAT CCAAGGGGCG GTGTTTACTG CTGTGATAAA GGATGGACCA 58950 |||||||| | | || ||||| ||| ||||| || || | ||| || || ||||| CTGGCACCAA CAGTGAGAAT CCACGGGGCT TCATTAGCTA CAGTGCCAAG CGACGGACCG 422 CTATTTCCAG CAGAACAACT TACAAGAATT CCTCTTTCCG TTGCACTGTA CGCCCCGATA 59010 ||||| || | || ||| ||||| ||| |||||||| | |||||||||| || ||||| | CTATTGCCTG ATGAGGCACT TACAAAAATA CCTCTTTCTG TTGCACTGTA CGTCCCGAGA 482 GCAATATTGT CTCTATGGAA AGGGATTGGA CCTCCACTAA GGGACATTGA AAGAATATCT 59070 |||||| | | |||||| ||| ||| | | ||||| || |||| ||||| |||||||||| GCAATACCAT CATCATGGAA AGGTTTTGTA CTTCCACCAA GGGAGATTGA AAGAATATCT 542 ACTCCATCAT CTATAGCTGA ATCCATGGCA GCTAAA 59106 || ||||||| ||||||||| || |||||| |||||| ACACCATCAT CTATAGCTGC ATAAATGGCA GCTAAA 578 hqPGS_C08HBa0165B06.1+_SGN-E286017- (58531 59106) ******************************************************************************** EST sequence 302 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 57877 to 59817): Exon 1 58541 59118 ( 578 n); cDNA 1 578 ( 578 n); score: 0.870 MATCH C08HBa0165B06.1+ SGN-E244401- 0.870 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E244401- (58541 59118) Alignment (genomic DNA sequence = upper lines): AAACAACCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTGACACCA TATTGTGATG 58600 ||| | |||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 60 GGTTGATGAT AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT TTATCAACAT 58660 ||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||| ||||| TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 120 TGGCTACATG GCCGAGTGCT GAACATAATA CTATCTTTCC TCTTATAGCA GGGTCAGTGA 58720 ||| || ||| |||| |||||||| |||||||||| ||||||| || ||| | ||| TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 180 GTGAACCTCG TCTGCAATAA GGGGTTTCGG ATGGATCTTT TGCATTTTTT GCAGCATCAA 58780 |||| ||| | | |||||||| |||||||| | |||||||||| ||||| |||| |||||||||| GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 240 ATAGAGTGAA GAATGTTGCG TTGGAAATCT TTGGACGATA AGCAGATTCT CCTTCAAATT 58840 |||||||||| |||||||| | |||||||||| ||||||||| |||||||||| ||||| |||| ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 300 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT GTCAAGCGTG CTGGCACCTA 58900 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 360 CCGTAAGAAT CCAAGGGGCG GTGTTTACTG CTGTGATAAA GGATGGACCA CTATTTCCAG 58960 | |||||||| ||||||||| | ||| | ||| | || | || || ||||| || | CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 420 CAGAACAACT TACAAGAATT CCTCTTTCCG TTGCACTGTA CGCCCCGATA GCAATATTGT 59020 |||||||||| ||||| || |||||| ||| |||||||||| ||||| | | |||||| || CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 480 CTCTATGGAA AGGGATTGGA CCTCCACTAA GGGACATTGA AAGAATATCT ACTCCATCAT 59080 | || ||| || | | ||| ||||| || ||| || || |||||||||| |||||||||| CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 540 CTATAGCTGA ATCCATGGCA GCTAAAACAT CACTTTCA 59118 |||||||||| |||||||||| ||||||| || |||| ||| CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 578 hqPGS_C08HBa0165B06.1+_SGN-E244401- (58541 59118) ******************************************************************************** EST sequence 311 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 57481 to 59817): Exon 1 58559 59118 ( 560 n); cDNA 1 560 ( 560 n); score: 0.868 MATCH C08HBa0165B06.1+ SGN-E244422- 0.868 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E244422- (58559 59118) Alignment (genomic DNA sequence = upper lines): GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG ATAATCATGC 58618 |||||||||| |||||||| | |||||||| | |||||||||| || |||||| | |||||||| GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 60 CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA TGGCCGAGTG 58678 |||||||||| |||||||||| ||| ||| || ||||| |||| | ||| || ||| || CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 120 CTGAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGAACCT CGTCTGCAAT 58738 || |||||| |||||||||| ||||||||| ||||| | | |||||| ||| || |||||| CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 180 AAGGGGTTTC GGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 58798 |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 240 CGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA TTTCCAAGCT 58858 ||||||||| || ||||||| |||||||||| ||||||| || |||||||||| |||||||||| AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 300 TAACAGTAGC TTTTATCTTT CTGTCAAGCG TGCTGGCACC TACCGTAAGA ATCCAAGGGG 58918 |||||||||| |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 360 CGGTGTTTAC TGCTGTGATA AAGGATGGAC CACTATTTCC AGCAGAACAA CTTACAAGAA 58978 | | ||| | ||| | | | | || | | ||||| || ||||||||| ||||||| || CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 420 TTCCTCTTTC CGTTGCACTG TACGCCCCGA TAGCAATATT GTCTCTATGG AAAGGGATTG 59038 |||||| | |||||||||| || ||||| | ||||||| ||| || | |||| | | | CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 480 GACCTCCACT AAGGGACATT GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 59098 || ||||| || ||| || |||||||||| |||||||||| |||||||||| |||||||||| GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 540 CAGCTAAAAC ATCACTTTCA 59118 ||||||||| |||||| ||| CAGCTAAAAT ATCACTGTCA 560 hqPGS_C08HBa0165B06.1+_SGN-E244422- (58559 59118) ******************************************************************************** EST sequence 260 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 58152 to 59835): Exon 1 58762 59225 ( 464 n); cDNA 1 464 ( 464 n); score: 0.888 MATCH C08HBa0165B06.1+ SGN-E202140- 0.888 464 0.998 C PGS_C08HBa0165B06.1+_SGN-E202140- (58762 59225) Alignment (genomic DNA sequence = upper lines): GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGCGT TGGAAATCTT TGGACGATAA 58821 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCAAGCTTAA CAGTAGCTTT TATCTTTCTG 58881 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| ||||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCAAGCGTGC TGGCACCTAC CGTAAGAATC CAAGGGGCGG TGTTTACTGC TGTGATAAAG 58941 |||||||||| |||||||||| ||||||||| |||||||| | ||| || | || | | TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 GATGGACCAC TATTTCCAGC AGAACAACTT ACAAGAATTC CTCTTTCCGT TGCACTGTAC 59001 || |||||| |||| || || || ||||| |||||||| | |||||| || |||||||||| GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCGATAG CAATATTGTC TCTATGGAAA GGGATTGGAC CTCCACTAAG GGACATTGAA 59061 ||||||| || ||||| | || || | | || | || ||||| || ||| || ||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 300 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAACATC ACTTTCAGAA 59121 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||| |||||| AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 360 CAACCAACAG AATTACACAC CTTATATATG GCTATATGGG CTAGAGGAGC AACACCAACT 59181 |||||||||| | |||||||| |||||||||| |||||||||| | |||||||| |||||||||| CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 420 GCAGTTCCAT CAGCATTGCC ATATACATTA GCACCTTTCA CAAA 59225 |||||||||| |||||| | |||||||||| |||||||||| |||| GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAA 464 hqPGS_C08HBa0165B06.1+_SGN-E202140- (58762 59225) ******************************************************************************** EST sequence 279 -strand 504 n (File: SGN-E288988-) 1 TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 61 GCACCTACTG TATTTTTTTT TTTTTTTTTT TGTGCTATTG TGCAAAGCTG CATCTTCTGA 121 ATCATACATT TCATTCTGTA CTCATACAAA CTGTGACAAA GACTCATGCT TTCAGTAACA 181 CAATTTACAA ACAAAAAAAG ACAACAATGG CAGAAACACA GTTTAGAAAA TGTGCCTGCA 241 AATGTGTTCC CAAGTAGCTA CTAGCAATAA CCAAAACGAC AACAGAATGT TTGAAAAATC 301 GAAAGACCAT TATCAGCAAG TGGTGATGGG ATTATCTTCA GAGGATTCAG CAGCAGAAGC 361 AACTATCAAC TGAGGCTCAG GGATGACACC TTCTCTTCGT GCCTTTCTAC GTTCACGTTG 421 TAATCTGAAG GACTCTCTCT TTCGGTTTCT ATAGCTGTTG GGGTTTTCAG GTTGCACCTC 481 GCGTGGATAA ACACTTATCT TTTT Predicted gene structure (within gDNA segment 58224 to 63861): Exon 1 58834 58901 ( 68 n); cDNA 1 68 ( 68 n); score: 0.956 Intron 1 58902 62145 (3244 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0) Exon 2 62146 62165 ( 20 n); cDNA 69 88 ( 20 n); score: 0.700 MATCH C08HBa0165B06.1+ SGN-E288988- 0.956 88 0.175 C PGS_C08HBa0165B06.1+_SGN-E288988- (58834 58901,62146 62165) Alignment (genomic DNA sequence = upper lines): TCAAATTCCT CTCCATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTGTC AAGCGTGCTG 58893 |||||||||| |||||||||| |||||| || |||||||||| ||||||| || |||||||||| TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC AAGCGTGCTG 60 GCACCTACCG TAAGAATCCA AGGGGCGGTG TTTACTGCTG TGATAAAGGA TGGACCACTA 58953 |||||||| GCACCTAC.. .......... .......... .......... .......... .......... 68 TTTCCAGCAG AACAACTTAC AAGAATTCCT CTTTCCGTTG CACTGTACGC CCCGATAGCA 59013 .......... .......... .......... .......... .......... .......... 68 ATATTGTCTC TATGGAAAGG GATTGGACCT CCACTAAGGG ACATTGAAAG AATATCTACT 59073 .......... .......... .......... .......... .......... .......... 68 CCATCATCTA TAGCTGAATC CATGGCAGCT AAAACATCAC TTTCAGAACA ACCAACAGAA 59133 .......... .......... .......... .......... .......... .......... 68 TTACACACCT TATATATGGC TATATGGGCT AGAGGAGCAA CACCAACTGC AGTTCCATCA 59193 .......... .......... .......... .......... .......... .......... 68 GCATTGCCAT ATACATTAGC ACCTTTCACA AAGGCTCCTG CAGCTGTGCT TGCTGTGTGT 59253 .......... .......... .......... .......... .......... .......... 68 GTACCATGTC CAATACTATC TATCGGGGAA CCATTACCAA GTTGGTAAGA CCTGGCTCCA 59313 .......... .......... .......... .......... .......... .......... 68 ATGAGCTTGT TGTTACACTT ATTGGTGAAA TTGGACTCAC AAACTCCTTT CCACTTAGCA 59373 .......... .......... .......... .......... .......... .......... 68 GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT CAGGAATAAT TCCAGTGTCT 59433 .......... .......... .......... .......... .......... .......... 68 ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT TCCATACACC CATGTTCTGC 59493 .......... .......... .......... .......... .......... .......... 68 TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG ACAAAATCCT CTGTTTCTGA 59553 .......... .......... .......... .......... .......... .......... 68 GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT GTTCTGCAGT TAATCTTGCT 59613 .......... .......... .......... .......... .......... .......... 68 GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG TAGCAGCCTC TTCATTTCCA 59673 .......... .......... .......... .......... .......... .......... 68 CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA GGTAATAGCT ACCTAAATCC 59733 .......... .......... .......... .......... .......... .......... 68 GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT CAACATGGAC GATATAAGTC 59793 .......... .......... .......... .......... .......... .......... 68 TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA AGATGAAAAC AAGAAGGATT 59853 .......... .......... .......... .......... .......... .......... 68 TTCAATAATC CCATGGCTAG CTAATACAAC AAGTGATGAT TTATTTGATG AATTTCTCTG 59913 .......... .......... .......... .......... .......... .......... 68 CTTTGAAGCA ACTGTCTATT TATAGTGTTT TATTATTGAC CTATTCAACA TCTAGAAAAA 59973 .......... .......... .......... .......... .......... .......... 68 TTATTGTGGA AAAAAGACAT GTGTATGAAC AAAATTATCA CTTCTCCAGT ATCAGAAAAT 60033 .......... .......... .......... .......... .......... .......... 68 TATATTCTAT GGTTTTATTT TCCAAATGAC ATCCACTATA ATATATTTAA TTTCGTTTTA 60093 .......... .......... .......... .......... .......... .......... 68 TCCCTTTAAG GAAAAAAGCT CAAATTTGTT GTTAAACTTG TGGAAAAAGC TCGTATATGA 60153 .......... .......... .......... .......... .......... .......... 68 CATTCTTTTA AAGTTTGACT TATTTATGTC ATTTTCAATT GAGAAACACG AGCGAAAAAA 60213 .......... .......... .......... .......... .......... .......... 68 GAAGAGAGGC GACCGAGATA TCTAGATATA TGTGAATCAT CCCCATAAAC ATCATGAGAA 60273 .......... .......... .......... .......... .......... .......... 68 TCGTATTAAG TACATGTATA CCAGAGATAC AGGAAGAGAG GCAAGCGAGA GAGGACAGTG 60333 .......... .......... .......... .......... .......... .......... 68 GTGATCGACA TAAGAAAATG GCGAATGAGA TAATTAGATA AATGTAAATC CACGAAAAAT 60393 .......... .......... .......... .......... .......... .......... 68 TACACTTAAT TTTGACTCGA TATTTCATTT GAACTTTTAA ATTATTACTG ATCATAATAA 60453 .......... .......... .......... .......... .......... .......... 68 TTATGGCGTA TTCTAATCAT CAAACTCATT TAACTAACAA AAGTTGACCC AAGACCTAAT 60513 .......... .......... .......... .......... .......... .......... 68 ATCCCAACAC AACTTAAACT TTTATTAATT TTGTGCTGTG TTTTTATATG TCGAAATCCA 60573 .......... .......... .......... .......... .......... .......... 68 TATTTATCTA TTTATTCCTT TAAATTGCAG AAATTATTAG AGATAATTGG CACTACATTT 60633 .......... .......... .......... .......... .......... .......... 68 CAGTCCACCT GATTACTTGT GGGGGCACAA AGGACCAACA GGGGCTGCTG GAAAAAAATA 60693 .......... .......... .......... .......... .......... .......... 68 TTGTTTTTAT ATGTGGAAAT CCAAGGAATG AAATTAAAAT TAGTGGATGG ATAGATAATA 60753 .......... .......... .......... .......... .......... .......... 68 TATGTATTTA ATTCATGAAT AATAAGTGTA TAATTAATAA TATAATCTAT GTATATCAAA 60813 .......... .......... .......... .......... .......... .......... 68 AATGGAAAGT AAACAATGAA TTCAATCAAT TATTTGTGTT AAAAAAAATT TTGTTCTTTT 60873 .......... .......... .......... .......... .......... .......... 68 TCCCCTTTCT TTGGGGCACG ATACGTATAA AATTAAGATT CAAGAAAACA CATTGTTGAG 60933 .......... .......... .......... .......... .......... .......... 68 GAAGATGAAC AGATACAATG CATAAACATT GTACAAACAG AGTATATGGA TGTATATACA 60993 .......... .......... .......... .......... .......... .......... 68 TCTTTGATAC ATAGTTATAC ATCATATATA CATAATTATA CAATATTGTT ACATTGCATA 61053 .......... .......... .......... .......... .......... .......... 68 AGGCCCTCCC TTTACGATCT TGGGCAGTGT CTCCTCATGA GCTATTTTGT GGCCGAGTTA 61113 .......... .......... .......... .......... .......... .......... 68 GGACTAAGAT AAGTTCTTTT ATCATTATAT TTATTACACT CAAATCCATT CTAATTTTTG 61173 .......... .......... .......... .......... .......... .......... 68 ATTTATTAAA TTTCATTTGG CGTGCAGAAA GGGGTTAATT AAAAATGAAA AATTTTCTTT 61233 .......... .......... .......... .......... .......... .......... 68 ATGCGAATTT GAACAATCCT TACTCTATTA ATTATTGTAA GGGTTTAGGT AGGGAAAATT 61293 .......... .......... .......... .......... .......... .......... 68 CCAAAATTCA TTTCTTATTA CATTATATTT TGGCTTTGGT AATCAGTAGC AAAACATGAA 61353 .......... .......... .......... .......... .......... .......... 68 TTTTCATTAA AAATAATCAA AATATAAAAA ATCAAGAAAA TTCTCCACAC GTATTATAAT 61413 .......... .......... .......... .......... .......... .......... 68 TAAACCACCA ATCTATCCAT CTAATTTTCC ACGAAAAAGT GTCACAACAA AGTGGTCCAC 61473 .......... .......... .......... .......... .......... .......... 68 GACCTTTCAT GATCCACTTT ATCTCAATCA AACAACTATA TGTTTTTAGT TTTTTTTAAG 61533 .......... .......... .......... .......... .......... .......... 68 CTTCACTATT AAGTATTTAT CGTCCACTAA TTCGATTAAA ATCAGATTCA CATATATTGC 61593 .......... .......... .......... .......... .......... .......... 68 TTTGTCCTTA TAAGACTATC AACGTTAACT TAATTTCATT TTCCTCCACA CCCGCTATTC 61653 .......... .......... .......... .......... .......... .......... 68 GAATCGACAT AATTTAAGTA TCTATAGAAG GGAAGGGGTT GTCAATAATA GTGACAAGGT 61713 .......... .......... .......... .......... .......... .......... 68 CATATGATTT TCACAAAAAA AAAATTAACG TAAAAAAAAA TTAACCTCAT ATATATAATA 61773 .......... .......... .......... .......... .......... .......... 68 TAATTTTTTC ACCAAAAGAT ACTCAAATGA ATTTCTTGCA ATTATTTGAT TCCGCCTCTA 61833 .......... .......... .......... .......... .......... .......... 68 TTGTTAAAAT GTGCCCTCTA TTACACGTTA AAACTCACAA TGAGACATTT TAATGTTATA 61893 .......... .......... .......... .......... .......... .......... 68 GTGTGGAAAA AAAAAAGTCA TGATTGAAAG AGAAAGTATG TAGAATTATT TTACACAAAT 61953 .......... .......... .......... .......... .......... .......... 68 AATAGACTAG TTGATTTCAT TATTTCCATA AAAAATAAAG GAAAGTAATG ACCACGTCAA 62013 .......... .......... .......... .......... .......... .......... 68 AAGTGTGATT AACAAGCCTG TCCTAGCAGT AAAGGTAAAG TCGAGATTAA AAGTTTAAAA 62073 .......... .......... .......... .......... .......... .......... 68 TTTGAAATTA AGATTAAAAA ACAATTGTTA AGTATGTTTT TTTTTAAAAA AATGAGAAAT 62133 .......... .......... .......... .......... .......... .......... 68 TTTTGTTGAC AGTGGGTCTT ATATTTTTAT TT 62165 || | || | ||||| | || .......... ..TGTATTTT TTTTTTTTTT TT 88 hqPGS_C08HBa0165B06.1+_SGN-E288988- (58834 58901) ******************************************************************************** EST sequence 188 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 56751 to 61673): Exon 1 59083 59858 ( 776 n); cDNA 1 779 ( 779 n); score: 0.891 MATCH C08HBa0165B06.1+ SGN-E539488- 0.891 776 0.996 C PGS_C08HBa0165B06.1+_SGN-E539488- (59083 59858) Alignment (genomic DNA sequence = upper lines): ATAGCTGAAT CCATGGCAGC TAAAACATCA CTTTCAGAAC AA---CCAAC AGAATTACAC 59139 ||||||| || |||||||||| ||||| ||| || ||||||| | ||| | |||| |||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA TGGCTATATG GGCTAGAGGA GCAACACCAA CTGCAGTTCC ATCAGCATTG 59199 |||||||||| ||||| || ||||||||| |||||||||| | ||||| || || |||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCATATACAT TAGCACCTTT CACAAAGGCT CCTGCAGCTG TGCTTGCTGT GTGTGTACCA 59259 ||| ||| || |||||||||| |||||||||| || ||||||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCAATAC TATCTATCGG GGAACCATTA CCAAGTTGGT AAGACCTGGC TCCAATGAGC 59319 |||||| || ||||||||| ||||||||| |||||||| | |||||||||| |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTATTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 59379 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATCC CAACATCGCT AAAAGAAGGA TGGTCAGGAA TAATTCCAGT GTCTATAACT 59439 |||||||||| ||||||| || ||| |||||| || ||||||| ||||||||| ||||| |||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CGCCTTTCCC ATAGTTGGAA TCCTTCCATA CACCCATGTT CTGCTGCAAA 59499 |||||||||| | ||| || | | |||||| || ||||| | |||||||| ||| |||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTGTGC AAAGACAAAA TCCTCTGTTT CTGAGCAGAG 59559 |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTTCTG CAGTTAATCT TGCTGCAAAC 59619 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTGTCATCA CATTGTGATA GGAATAGATC ATGGTAGCAG CCTCTTCATT TCCACTCGAA 59679 ||| |||||| ||||||| || ||| |||||| ||| |||||| ||||||||| ||||||||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGTGG TAGCAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTACCTAA ATCCGTTAAC 59739 ||||||| || ||| |||||| |||||||||| |||||||||| |||| |||| ||||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 AATGATTGAG TAGTAACTAG GCTTTCAGGG GATTCAACAT GGACGATATA AGTCTCGAGA 59799 ||||||||| ||| || | | | ||||||| |||||||||| |||| ||||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TTACTCTGAA TAGTAGGCCA TTGGAAAGAA CAGAAGATGA AAACAAGAAG GATTTTCAA 59858 | |||||||| || |||||| | ||||||| || || |||| | | |||||| |||||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1+_SGN-E539488- (59083 59858) ******************************************************************************** EST sequence 330 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 58699 to 64942): Exon 1 59345 59897 ( 553 n); cDNA 1 552 ( 552 n); score: 0.937 MATCH C08HBa0165B06.1+ SGN-E207645- 0.937 553 1.002 C PGS_C08HBa0165B06.1+_SGN-E207645- (59345 59897) Alignment (genomic DNA sequence = upper lines): TGGACTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAAAG 59404 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGGTC AGGAATAATT CCAGTGTCTA TAACTCCGAT GATCACGCCT TTCCCATAGT 59464 ||||||| || ||||| |||| |||||||||| ||||||||| |||||||||| | ||| | | AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCCTT CCATACACCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 59524 ||||||| || ||| | ||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 59584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAGGAAT 59644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATGGT AGCAGCCTCT TCATTTCCAC TCGAACTAAT TGTGGTAGCA GTTTTAGGCA 59704 ||||||| || |||||||||| |||||||||| | || ||||| || ||||| | |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAAAG GTAATAGCTA CCTAAATCCG TTAACAATGA TTGAGTAGTA ACTAGGCTTT 59764 |||||||||| |||||||||| |||||||| ||||| |||| ||||| |||| | |||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATTGGA 59824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAACAGAA GATGAAAACA AGAAGGATTT TCAATAATCC CATGGCTAGC TAATACAACA 59884 | ||||| || |||||||||| | |||||||| |||| ||||| ||||||| || |||| || | ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCT-GC AAATATAAGA 539 AGTGATGATT TAT 59897 |||| |||| ||| AGTGCTGATG TAT 552 hqPGS_C08HBa0165B06.1+_SGN-E207645- (59345 59897) ******************************************************************************** EST sequence 408 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 58744 to 60486): Exon 1 59354 59886 ( 533 n); cDNA 1 533 ( 533 n); score: 0.996 MATCH C08HBa0165B06.1+ SGN-E330205- 0.996 533 1.000 C PGS_C08HBa0165B06.1+_SGN-E330205- (59354 59886) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 59413 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 59473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 59533 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 59593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 59653 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 59713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 59773 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 59833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAGAAGGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG 59886 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| ||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG 533 hqPGS_C08HBa0165B06.1+_SGN-E330205- (59354 59886) ******************************************************************************** EST sequence 349 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 58803 to 60481): Exon 1 59413 59881 ( 469 n); cDNA 1 469 ( 469 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E207387- 1.000 469 1.000 C PGS_C08HBa0165B06.1+_SGN-E207387- (59413 59881) Alignment (genomic DNA sequence = upper lines): TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 59472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 59532 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 59592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 59652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 59712 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 59772 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 59832 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA 59881 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA 469 hqPGS_C08HBa0165B06.1+_SGN-E207387- (59413 59881) ******************************************************************************** EST sequence 148 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 58134 to 61663): Exon 1 59421 59857 ( 437 n); cDNA 3 439 ( 437 n); score: 0.897 MATCH C08HBa0165B06.1+ SGN-E282403- 0.897 437 0.995 C PGS_C08HBa0165B06.1+_SGN-E282403- (59421 59857) Alignment (genomic DNA sequence = upper lines): AATTCCAGTG TCTATAACTC CGATGATCAC GCCTTTCCCA TAGTTGGAAT CCTTCCATAC 59480 |||||||||| |||| ||||| |||||||||| ||| ||| | ||||||| | ||||| | AATTCCAGTG TCTAGAACTC CGATGATCAC ACCTACTCCA AAATTGGAAT CTTTCCACAA 62 ACCCATGTTC TGCTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTGTGCA AAGACAAAAT 59540 ||||||||| || ||||||| |||||||||| |||||||||| ||||| |||| | || ||||| GCCCATGTTC TGTTGCAAAC CAAGAAAACT TGGAGTATGA GTAGTATGCA AGGAGAAAAT 122 CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTTCTGC 59600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CCTCTGTTTC TGAGCAGAGA CAAAGCCGTG TTTTTTCTCC ATTTCCTTCA CTTGTGCTGC 182 AGTTAATCTT GCTGCAAACC CTGTCATCAC ATTGTGATAG GAATAGATCA TGGTAGCAGC 59660 |||||||||| |||||||| | || ||||||| |||||| ||| || ||||||| || ||||||| AGTTAATCTT GCTGCAAAAC CTTTCATCAC ATTGTGGTAG GAGTAGATCA TGCTAGCAGC 242 CTCTTCATTT CCACTCGAAC TAATTGTGGT AGCAGTTTTA GGCAAAAAAG AAAGGTAATA 59720 |||||||| | |||||||| | |||||| ||| || ||||||| |||||||||| |||||||||| CTCTTCATCT CCACTCGAGC TAATTGCGGT AGTAGTTTTA GGCAAAAAAG AAAGGTAATA 302 GCTACCTAAA TCCGTTAACA ATGATTGAGT AGTAACTAGG CTTTCAGGGG ATTCAACATG 59780 ||| ||||| |||||||| |||||||||| || || | || ||||||| | |||||||||| GCTCTCTAAA TCCGTTAATG ATGATTGAGT AGAAATTTGG TTTTCAGGTG ATTCAACATG 362 GACGATATAA GTCTCGAGAT TACTCTGAAT AGTAGGCCAT TGGAAAGAAC AGAAGATGAA 59840 ||| |||||| |||||||||| ||||||||| | |||||| | ||||||| | | || ||||| GACTATATAA GTCTCGAGAT CACTCTGAAT ACTAGGCCTT AGGAAAGAGC AAAATATGAA 422 AACAAGAAGG ATTTTCA 59857 | |||||| ||||||| GATAAGAAGA ATTTTCA 439 hqPGS_C08HBa0165B06.1+_SGN-E282403- (59421 59857) ******************************************************************************** EST sequence 39 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 58397 to 67056): Exon 1 63816 64204 ( 389 n); cDNA 138 523 ( 386 n); score: 0.839 Intron 1 64205 64469 ( 265 n); Pd: 0.183 (s: 0.88), Pa: 0.000 (s: 0.90) Exon 2 64470 64745 ( 276 n); cDNA 524 799 ( 276 n); score: 0.870 PPA cDNA 31 13 MATCH C08HBa0165B06.1+ SGN-E548357+ 0.852 665 0.832 C PGS_C08HBa0165B06.1+_SGN-E548357+ (63816 64204,64470 64745) Alignment (genomic DNA sequence = upper lines): AACTGCAATT GGACTTCTCA CTGAGTGTCT ACTAGAAGTC CATTTCAAGA ATCCATCAAC 63875 |||||||||| |||||||| | | ||||| || | ||||| || || ||||| | |||| ||||| AACTGCAATT GGACTTCTTA CAGAGTGCCT ATTAGAATTC CACTTCAAAA ATCCCTCAAC 197 AATCAC-AAA GTTTGAGCTG CTAGTTGTCT TGGAAAATGT CACTTGGTAT GTTAACTTCT 63934 ||||| ||||| | ||||||||| ||| |||| | |||||| ||| || ||||||| -ATCACTGGT AGTTGAGATA TTAGTTGTCT TGGTAAATAT CACTTGATAT GTCAACTTCT 256 GGTTCAACTC GGAGAAATTT AGCTCTGTGG GCTTAACTTC CACGGCAACG CCTTTTGGTG 63994 |||||||| ||||||||| ||| | | || | | ||||| |||| |||| |||||||||| GGTTCAACGT TGAGAAATTT AGCGCGGAGG GTTCAACTTT CACGACAACT CCTTTTGGTG 316 AAGCTACCTC CACTTTGTAA GATGATGTAG CGTCACCAAC GTTGGTCACA GTTCTTGTAT 64054 || ||| ||| |||||||||| |||||| ||| | |||||||| ||||| || ||||| |||| AAACTATCTC CACTTTGTAA GATGATTTAG CATCACCAAC ATTGGTTACG GTTCTGGTAT 376 ATGTCTGAGG AGTTGATCCA AGTTCAGTTA TGCAAAATGA AGGATAGTTT AATTGTGCTT 64114 |||||||||| |||||||||| || || | | || ||||||| |||||| ||| | ||| ||| ATGTCTGAGG AGTTGATCCA AG-TC--TGA TGGAAAATGA AGGATAATTT AGTTGCCCTT 433 CAAGGATAAT TTTCACCTCC GAGCAATTCA CCCTGCGTTG TAACAGGTTA CCTACCTGTC 64174 || ||||| ||| |||||| |||||||||| || ||||||| ||||| ||| ||||||| | CAGGGATACG TTTTACCTCC GAGCAATTCA CCTTGCGTTG TAACACTTTA CCTACCTCCC 493 GATTCGTATA GTTCAAACCA CATAAATAAG GTAGATAGTC CTCAAATGGG ATATCATAAA 64234 |||| || || |||||||||| |||||||||| GATTTGTGTA GTTCAAACCA CATAAATAAG .......... .......... .......... 523 CTAGTCCTGG ATCATTTGCC CTCGATGGAT TAACATGTCC TGCACCAGTG GCAAAAATGT 64294 .......... .......... .......... .......... .......... .......... 523 CAGCAGGAAG GAGCCTTTCG TCTAGTATTG GACTATTGGC AAGGTTTAAC GTGTCAGCAG 64354 .......... .......... .......... .......... .......... .......... 523 TTGTCATGAT TGCAGACTTA ATAGCTGCAG GAGACCAATC AGGATGTGTG CTCTTCAGCA 64414 .......... .......... .......... .......... .......... .......... 523 GAGCTGCTAC GCCACTAAGG TGAGGGCAAG ACATTGAGGT GCCTGATATA ATATTGAATG 64474 ||||| .......... .......... .......... .......... .......... .....GAATG 528 TGGATTTGGT GTCCTTGTTG TCATCCACGG AGGTAGGCCA AGCAGCAAGG ATATTAACAC 64534 | ||||| || || |||||| | |||||||| |||||||||| |||||||||| | ||||||| TTGATTTTGT GTTTTTGTTG TTATCCACGG AGGTAGGCCA AGCAGCAAGG ACGTTAACAC 588 CAGGACCGAT TATGTCAGGT TTCAAGATGC CAGGACTAGC TCTACTTGGT CCTCTTGAGG 64594 |||||||||| |||||||||| || ||||||| ||||||| || | |||||| |||| ||||| CAGGACCGAT TATGTCAGGT TTTAAGATGC CAGGACTTGC TACGCTTGGT CCTCGTGAGG 648 AAAATGCAGC AACCATAGGA GCATTTTTAT CTCCAATTAT TGTTCCTTGG AATGCGATTG 64654 |||||| ||| ||| |||||| |||||||| | ||||||||| ||||| ||| || | ||||| AAAATGAAGC AACTATAGGA GCATTTTTGT CTCCAATTAC AGTTCCATGG AAGGTGATTG 708 TAGCAACAGG GTTTGATGTT GAATTCATAT AAGCAAGGAT TTTTGTTCCA TCTGCATCTG 64714 |||||| || ||||| | | || ||||||| | ||||| || ||| ||||| || |||| || AAGCAACCGG ATTTGAAGAT GAGTTCATAT AGGCAAGAAT TTTCTTTCCA TCAGCATTTG 768 AAACATCCAA TGCTGGAAGA ACATGAGCAT C 64745 |||||||||| ||| ||||| |||||||| | | AAACATCCAA TGCAGGAAGG ACATGAGCTT C 799 hqPGS_C08HBa0165B06.1+_SGN-E548357+ (63816 64204,64470 64745) ******************************************************************************** EST sequence 282 -strand 446 n (File: SGN-E353214-) 1 TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 61 ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 121 ACCGCTCAGT GATGAGCTGT TCACCAGAGT GGAGGAACGA GCCACGTGTC ATGCAAAAGA 181 GCTTCTTCAG AATCTTCAGT TTTTTCATAT TGTTGCTTCA CTTTCTCTTG TGTAGAGATT 241 TGAATGTTTA ATTAGTAGAA TTTTCAAAAG AGAGACAAAG AGGCTCTAGT GAAAGTCTAT 301 ATGTCTCTCA TGTATTAGAA TGAAATATTG TTAGAGAAAT TAAGACTGAC TTGTAGTTTG 361 GTTTGGTTGA TAATATATGA TCGGTAAAAA TTAAATGTTT AAATTTGTGA TTTAACCAAA 421 AAAAAAAAAA AAAAAAAAAA AAACTC Predicted gene structure (within gDNA segment 62841 to 68042): Exon 1 63762 63894 ( 133 n); cDNA 6 139 ( 134 n); score: 0.838 PPA cDNA 418 444 MATCH C08HBa0165B06.1+ SGN-E353214- 0.838 133 0.298 C PGS_C08HBa0165B06.1+_SGN-E353214- (63762 63894) Alignment (genomic DNA sequence = upper lines): AAATGTATGA GTAGTTTATG CACTCGTAAA GCCAATTTTT GACTAGGCTA ACACAACTGC 63821 |||||| || ||| || ||| |||| || | |||||||||| |||||||| |||||||||| AAATGTCCGA GTACTTAATG CACTTATATA GCCAATTTTT GACTAGGCAG ACACAACTGC 65 AATTGGACTT CTCACTGAGT GTCTACTAGA AGTCCATTTC AAGAATCCAT CAACAATCAC 63881 |||||||||| |||||||||| | ||| |||| |||||| ||| |||||||| | ||| || | | AATTGGACTT CTCACTGAGT GCCTATTAGA AGTCCACTTC AAGAATCCCT CAATAACCGC 125 AAAGT-TTGA GCTG 63894 ||| ||| |||| TCAGTGATGA GCTG 139 hqPGS_C08HBa0165B06.1+_SGN-E353214- (63762 63894) ******************************************************************************** EST sequence 320 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 61848 to 65568): Exon 1 63793 64194 ( 402 n); cDNA 40 441 ( 402 n); score: 0.868 PPA cDNA 11 1 MATCH C08HBa0165B06.1+ SGN-E307529- 0.868 402 0.912 C PGS_C08HBa0165B06.1+_SGN-E307529- (63793 64194) Alignment (genomic DNA sequence = upper lines): CCAATTTTTG ACTAGGCTAA CACAACTGCA ATTGGACTTC TCACTGAGTG TCTACTAGAA 63852 ||||||||| ||||| | || ||||||||| |||||||||| |||| ||||| ||| ||||| CCAATTTTTC ACTAGACCAA TACAACTGCA ATTGGACTTC TCACAGAGTG CCTAGTAGAA 99 GTCCATTTCA AGAATCCATC AACAATCACA AAGTTTGAGC TGCTAGTTGT CTTGGAAAAT 63912 ||||| |||| ||||||| || ||||| |||| | | ||| | |||| ||||| |||||||||| GTCCACTTCA AGAATCCCTC AACAACCACA ACTTCTGAAC TGCTGGTTGT CTTGGAAAAT 159 GTCACTTGGT ATGTTAACTT CTGGTTCAAC TCGGAGAAAT TTAGCTCTGT GGGCTTAACT 63972 |||||||||| |||||||||| |||||||||| | |||||||| |||| ||||| ||| |||| GTCACTTGGT ATGTTAACTT CTGGTTCAAC TTGGAGAAAT TTAGTTCTGT GGGTACAACT 219 TCCACGGCAA CGCCTTTTGG TGAAGCTACC TCCACTTTGT AAGATGATGT AGCGTCACCA 64032 || | ||||| | ||| | || |||||||| | |||||||||| ||||||||| | | |||||| TCTATGGCAA CTCCTATAGG TGAAGCTATC TCCACTTTGT AAGATGATGC AACATCACCA 279 ACGTTGGTCA CAGTTCTTGT ATATGTCTGA GGAGTTGATC CAAGTTCAGT TATGCAAAAT 64092 |||||||||| |||||||||| ||||||||| |||||||||| ||||| || |||| |||| ACGTTGGTCA CAGTTCTTGT GTATGTCTGA GGAGTTGATC CAAGTCCAAA TATGGAAAAC 339 GAAGGATAGT TTAATTGTGC TTCAAGGATA ATTTTCACCT CCGAGCAATT CACCCTGCGT 64152 |||||||||| |||||| ||| |||| ||||| | || || | | ||||||| ||| ||||| GAAGGATAGT TTAATTCTGC TTCAGGGATA CTCTTTACTT CTAAGCAATT TACCTTGCGT 399 TGTAACAGGT TACCTACCTG TCGATTCGTA TAGTTCAAAC CA 64194 |||||||| | ||| |||||| | ||| || || |||||| || TGTAACAGTT TACTTACCTG TGCATTTGTG TACCTCAAAC CA 441 hqPGS_C08HBa0165B06.1+_SGN-E307529- (63793 64194) ******************************************************************************** EST sequence 344 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 62639 to 66150): Exon 1 63834 64407 ( 574 n); cDNA 1 574 ( 574 n); score: 0.887 MATCH C08HBa0165B06.1+ SGN-E207413- 0.887 574 1.000 C PGS_C08HBa0165B06.1+_SGN-E207413- (63834 64407) Alignment (genomic DNA sequence = upper lines): CACTGAGTGT CTACTAGAAG TCCATTTCAA GAATCCATCA ACAATCACAA AGTTTGAGCT 63893 ||| ||||| || ||||| |||| ||||| |||||| ||| |||| | || | ||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 GCTAGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC TGGTTCAACT CGGAGAAATT 63953 | || ||||| |||||||||| |||||||||| ||||| |||| |||||||||| | |||||||| GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 TAGCTCTGTG GGCTTAACTT CCACGGCAAC GCCTTTTGGT GAAGCTACCT CCACTTTGTA 64013 ||||| || |||||||||| |||| |||| |||||| ||| ||||||| || ||| |||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATGTA GCGTCACCAA CGTTGGTCAC AGTTCTTGTA TATGTCTGAG GAGTTGATCC 64073 ||||||| | || ||||||| | |||||||| |||||| || |||||||||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAGTTCAGTT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAAGGATAA TTTTCACCTC 64133 |||| | | |||||||||| |||||||||| |||||||||| ||| ||||| ||| ||||| AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 300 CGAGCAATTC ACCCTGCGTT GTAACAGGTT ACCTACCTGT CGATTCGTAT AGTTCAAACC 64193 |||||||||| ||||||||| |||||| || |||||||||| |||| || | |||||||||| CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 360 ACATAAATAA GGTAGATAGT CCTCAAATGG GATATCATAA ACTAGTCCTG GATCATTTGC 64253 |||||||||| |||| ||| | |||||||||| | |||||||| |||||||||| |||||||||| ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 420 CCTCGATGGA TTAACATGTC CTGCACCAGT GGCAAAAATG TCAGCAGGAA GGAGCCTTTC 64313 |||||||||| |||||||||| ||||||| | ||| | || ||||||||| ||||||||| CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 480 GTCTAGTATT GGACTATTGG CAAGGTTTAA CGTGTCAGCA GTTGTCATGA TTGCAGACTT 64373 ||| |||||| |||||| ||| |||||||||| |||||||| |||||||| | |||||||||| GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 540 AATAGCTGCA GGAGACCAAT CAGGATGTGT GCTC 64407 |||| | ||| |||||||||| |||||||||| ||| AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC 574 hqPGS_C08HBa0165B06.1+_SGN-E207413- (63834 64407) ******************************************************************************** EST sequence 103 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 62870 to 66093): Exon 1 63938 64377 ( 440 n); cDNA 1 440 ( 440 n); score: 0.916 MATCH C08HBa0165B06.1+ SGN-E287935+ 0.916 440 0.892 C PGS_C08HBa0165B06.1+_SGN-E287935+ (63938 64377) Alignment (genomic DNA sequence = upper lines): TCAACTCGGA GAAATTTAGC TCTGTGGGCT TAACTTCCAC GGCAACGCCT TTTGGTGAAG 63997 |||||||||| |||||||||| || | ||| | |||||| | |||||||||| | |||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTACCTCCAC TTTGTAAGAT GATGTAGCGT CACCAACGTT GGTCACAGTT CTTGTATATG 64057 |||||||||| |||||||||| |||||||| | ||||||| || ||| |||||| || ||||||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGT TCAGTTATGC AAAATGAAGG ATAGTTTAAT TGTGCTTCAA 64117 |||||||||| |||||||||| || |||| |||| ||||| |||||||||| |||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATAATTTT CACCTCCGAG CAATTCACCC TGCGTTGTAA CAGGTTACCT ACCTGTCGAT 64177 ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| |||||| ||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TCGTATAGTT CAAACCACAT AAATAAGGTA GATAGTCCTC AAATGGGATA TCATAAACTA 64237 || || || |||||||||| |||||||||| ||||||||| ||||| || |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCAGTGGCA AAAATGTCAG 64297 |||||||||| ||||||||| |||||||||| |||||||||| |||| | ||| | ||||||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TATTGGCAAG GTTTAACGTG TCAGCAGTTG 64357 |||||||||| |||||| || |||||||||| |||| ||||| |||||||||| ||||| |||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATGATTGC AGACTTAATA 64377 |||| ||||| |||||||||| TCATCATTGC AGACTTAATA 440 hqPGS_C08HBa0165B06.1+_SGN-E287935+ (63938 64377) ******************************************************************************** EST sequence 219 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 63344 to 65351): Exon 1 64044 64751 ( 708 n); cDNA 1 708 ( 708 n); score: 0.901 MATCH C08HBa0165B06.1+ SGN-E213673- 0.901 708 1.000 C PGS_C08HBa0165B06.1+_SGN-E213673- (64044 64751) Alignment (genomic DNA sequence = upper lines): AGTTCTTGTA TATGTCTGAG GAGTTGATCC AAGTTCAGTT ATGCAAAATG AAGGATAGTT 64103 |||||| || |||||||||| |||||||||| |||| | | ||||||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAAGGATAA TTTTCACCTC CGAGCAATTC ACCCTGCGTT GTAACAGGTT 64163 |||||||||| ||| ||||| ||| ||||| |||||||||| ||||||||| |||||| || TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTGT CGATTCGTAT AGTTCAAACC ACATAAATAA GGTAGATAGT CCTCAAATGG 64223 |||||||||| |||| || | |||||||||| |||||||||| |||| ||| | |||||||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 GATATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCAGT 64283 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 GGCAAAAATG TCAGCAGGAA GGAGCCTTTC GTCTAGTATT GGACTATTGG CAAGGTTTAA 64343 ||| | || ||||||||| ||||||||| ||| |||||| |||||| ||| |||||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 CGTGTCAGCA GTTGTCATGA TTGCAGACTT AATAGCTGCA GGAGACCAAT CAGGATGTGT 64403 |||||||| |||||||| | |||||||||| |||| | ||| |||||||||| |||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 GCTCTTCAGC AGAGCTGCTA CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT 64463 ||||||||| |||||||||| | |||||||| ||| |||||| ||||| |||| |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACG GAGGTAGGCC AAGCAGCAAG 64523 |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| ||||||| || AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG CCAGGACTAG CTCTACTTGG 64583 |||||||||| |||||||| | |||||||||| ||||||||| |||||| ||| | ||||||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCTCTTGAG GAAAATGCAG CAACCATAGG AGCATTTTTA TCTCCAATTA TTGTTCCTTG 64643 ||| | || |||||||||| |||| || || |||||||||| |||||||||| ||||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GAATGCGATT GTAGCAACAG GGTTTGATGT TGAATTCATA TAAGCAAGGA TTTTTGTTCC 64703 || || |||| |||||||||| |||| ||| | ||| || || || ||| | | |||| |||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 ATCTGCATCT GAAACATCCA ATGCTGGAAG AACATGAGCA TCAGCTGA 64751 ||||||| || |||||| ||| |||||||||| |||||||||| |||||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 708 hqPGS_C08HBa0165B06.1+_SGN-E213673- (64044 64751) ******************************************************************************** EST sequence 180 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 63283 to 65567): Exon 1 64064 64697 ( 634 n); cDNA 1 634 ( 634 n); score: 0.904 MATCH C08HBa0165B06.1+ SGN-E213088- 0.904 634 1.000 C PGS_C08HBa0165B06.1+_SGN-E213088- (64064 64697) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTTCAGTT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAAGGATAA 64123 |||||||||| |||| | | |||||||||| |||||||||| |||||||||| ||| ||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTTCACCTC CGAGCAATTC ACCCTGCGTT GTAACAGGTT ACCTACCTGT CGATTCGTAT 64183 ||| ||||| |||||||||| ||||||||| |||||| || |||||||||| |||| || | TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTCAAACC ACATAAATAA GGTAGATAGT CCTCAAATGG GATATCATAA ACTAGTCCTG 64243 |||||||||| |||||||||| |||| ||| | |||||||||| | |||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCAGT GGCAAAAATG TCAGCAGGAA 64303 |||||||||| |||||||||| |||||||||| ||||||| | ||| | || ||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 GGAGCCTTTC GTCTAGTATT GGACTATTGG CAAGGTTTAA CGTGTCAGCA GTTGTCATGA 64363 ||||||||| ||| |||||| |||||| ||| |||||||||| |||||||| |||||||| | GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAGCTGCA GGAGACCAAT CAGGATGTGT GCTCTTCAGC AGAGCTGCTA 64423 |||||||||| |||| | ||| |||||||||| |||||||||| ||||||||| |||||||||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CGCCACTAAG GTGAGGGCAA GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 64483 | |||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTCCTTGTT GTCATCCACG GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA 64543 |||||||||| ||||||||| || ||||||| ||||||| || |||||||||| |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTCAAGATG CCAGGACTAG CTCTACTTGG TCCTCTTGAG GAAAATGCAG 64603 |||||||||| ||||||||| |||||| ||| | ||||||| ||| | || |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACCATAGG AGCATTTTTA TCTCCAATTA TTGTTCCTTG GAATGCGATT GTAGCAACAG 64663 |||| || || |||||||||| |||||||||| ||||||||| || || |||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGTTTGATGT TGAATTCATA TAAGCAAGGA TTTT 64697 |||| ||| | ||| || || || ||| | | |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1+_SGN-E213088- (64064 64697) ******************************************************************************** EST sequence 198 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 63423 to 65552): Exon 1 64168 64871 ( 704 n); cDNA 1 704 ( 704 n); score: 0.903 MATCH C08HBa0165B06.1+ SGN-E212584- 0.903 704 1.000 C PGS_C08HBa0165B06.1+_SGN-E212584- (64168 64871) Alignment (genomic DNA sequence = upper lines): ACCTGTCGAT TCGTATAGTT CAAACCACAT AAATAAGGTA GATAGTCCTC AAATGGGATA 64227 |||||| ||| | || ||||| |||||||||| |||||||||| ||| ||||| ||||||| || ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCAGTGGCA 64287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| | ||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 AAAATGTCAG CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TATTGGCAAG GTTTAACGTG 64347 | || |||| ||||| |||| ||||| ||| |||||||||| || ||||||| |||||| ||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCAGTTG TCATGATTGC AGACTTAATA GCTGCAGGAG ACCAATCAGG ATGTGTGCTC 64407 ||||| |||| |||| ||||| |||||||||| | ||||||| |||||||||| |||||| ||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCTACGCC ACTAAGGTGA GGGCAAGACA TTGAGGTGCC TGATATAATA 64467 |||||||||| ||||||| || ||||||||| |||||||||| | |||||||| |||||||||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACGGAGG TAGGCCAAGC AGCAAGGATA 64527 |||||||||| |||||||||| |||||||||| ||||| || | |||||||||| ||| |||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCGATTAT GTCAGGTTTC AAGATGCCAG GACTAGCTCT ACTTGGTCCT 64587 |||||||||| |||| ||||| |||||||||| ||||| |||| || ||| | | ||||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CTTGAGGAAA ATGCAGCAAC CATAGGAGCA TTTTTATCTC CAATTATTGT TCCTTGGAAT 64647 | || |||| |||||||||| || |||||| |||||||||| |||||| ||| |||||||| | CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GCGATTGTAG CAACAGGGTT TGATGTTGAA TTCATATAAG CAAGGATTTT TGTTCCATCT 64707 | |||||||| |||||||||| ||| |||| || |||| | || | ||||| |||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCATCTGAAA CATCCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT AACACCGTCA 64767 ||| |||||| || ||||||| |||||||||| |||||||||| |||||||||| ||||| | GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TCTGGACTGT TGATGATAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 64827 | || || |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 TCAACAATGG TTACACCACC GAATGCTAAA CATAACACTA TCTT 64871 |||||| ||| |||||| || |||||||||| ||||| |||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1+_SGN-E212584- (64168 64871) ******************************************************************************** EST sequence 247 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 63316 to 67466): Exon 1 64196 64787 ( 592 n); cDNA 1 592 ( 592 n); score: 0.867 MATCH C08HBa0165B06.1+ SGN-E329031- 0.867 592 1.000 C PGS_C08HBa0165B06.1+_SGN-E329031- (64196 64787) Alignment (genomic DNA sequence = upper lines): ATAAATAAGG TAGATAGTCC TCAAATGGGA TATCATAAAC TAGTCCTGGA TCATTTGCCC 64255 |||||||||| | ||||| || ||||| |||||||||| |||||||||| ||| | | | ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 60 TCGATGGATT AACATGTCCT GCACCAGTGG CAAAAATGTC AGCAGGAAGG AGCCTTTCGT 64315 |||||||||| |||||||||| ||||| | | |||| | || ||||| || | |||||||||| TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 120 CTAGTATTGG ACTATTGGCA AGGTTTAACG TGTCAGCAGT TGTCATGATT GCAGACTTAA 64375 | |||||||| ||| ||||| ||||||| | ||||||| || |||||| ||| || ||||||| CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 180 TAGCTGCAGG AGACCAATCA GGATGTGTGC TCTTCAGCAG AGCTGCTACG CCACTAAGGT 64435 |||||||||| |||||||||| ||||||| || |||||||||| |||||| || |||||||||| TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 240 GAGGGCAAGA CATTGAGGTG CCTGATATAA TATTGAATGT GGATTTGGTG TCCTTGTTGT 64495 |||||||||| ||||||||| || |||| | |||||||||| ||||| ||| | ||||||| GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 300 CATCCACGGA GGTAGGCCAA GCAGCAAGGA TATTAACACC AGGACCGATT ATGTCAGGTT 64555 ||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 360 TCAAGATGCC AGGACTAGCT CTACTTGGTC CTCTTGAGGA AAATGCAGCA ACCATAGGAG 64615 | |||||||| |||||| ||| ||||||| ||| |||||| ||||| |||| || ||||||| TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 420 CATTTTTATC TCCAATTATT GTTCCTTGGA ATGCGATTGT AGCAACAGGG TTTGATGTTG 64675 ||||||| || |||||||| ||||| |||| | | ||||| |||||| || ||||| | || CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 480 AATTCATATA AGCAAGGATT TTTGTTCCAT CTGCATCTGA AACATCCAAT GCTGGAAGAA 64735 | |||||||| ||||| ||| || |||||| | |||| ||| |||||||||| || ||||| | AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 540 CATGAGCATC AGCTGATTTA GTAACACCGT CATCTGGACT GTTGATGATA AT 64787 ||||||| || |||||||||| || ||||| | | ||| | ||||||| | || CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 592 hqPGS_C08HBa0165B06.1+_SGN-E329031- (64196 64787) ******************************************************************************** EST sequence 417 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 63546 to 65866): Exon 1 64219 64627 ( 409 n); cDNA 1 409 ( 409 n); score: 0.863 MATCH C08HBa0165B06.1+ SGN-E317658- 0.863 409 1.000 C PGS_C08HBa0165B06.1+_SGN-E317658- (64219 64627) Alignment (genomic DNA sequence = upper lines): AATGGGATAT CATAAACTAG TCCTGGATCA TTTGCCCTCG ATGGATTAAC ATGTCCTGCA 64278 ||||| ||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCAGTGGCAA AAATGTCAGC AGGAAGGAGC CTTTCGTCTA GTATTGGACT ATTGGCAAGG 64338 || | |||| | | ||||| | || |||| |||||||| | |||||||||| | || ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAACGTGT CAGCAGTTGT CATGATTGCA GACTTAATAG CTGCAGGAGA CCAATCAGGA 64398 |||| |||| |||| ||||| ||| ||||| ||||||||| |||||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGTGCTCT TCAGCAGAGC TGCTACGCCA CTAAGGTGAG GGCAAGACAT TGAGGTGCCT 64458 |||| ||| | |||||||||| ||| || ||| |||||||||| ||||| |||| |||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATAATAT TGAATGTGGA TTTGGTGTCC TTGTTGTCAT CCACGGAGGT AGGCCAAGCA 64518 |||| |||| ||||||| || ||| |||| ||||||| || |||||||||| |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGATAT TAACACCAGG ACCGATTATG TCAGGTTTCA AGATGCCAGG ACTAGCTCTA 64578 ||||||| | |||||||||| |||||||||| |||||||| | |||||||||| || ||| GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCTC TTGAGGAAAA TGCAGCAACC ATAGGAGCAT TTTTATCTC 64627 |||||||||| | ||| ||| || |||| | |||||||||| |||| |||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1+_SGN-E317658- (64219 64627) ******************************************************************************** EST sequence 290 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 63024 to 66026): Exon 1 64285 64889 ( 605 n); cDNA 4 605 ( 602 n); score: 0.879 MATCH C08HBa0165B06.1+ SGN-E308535- 0.879 605 1.000 C PGS_C08HBa0165B06.1+_SGN-E308535- (64285 64889) Alignment (genomic DNA sequence = upper lines): GCAAAAATGT CAGCAGGAAG GAGCCTTTCG TCTAGTATTG GACTATTGGC AAGGTTTAAC 64344 ||||| |||| | |||||||| | | |||| |||||||||| ||||| |||| ||||||||| GCAAAGATGT CTGCAGGAAG TAACTTTTCA TCTAGTATTG GACTACTGGC AAGGTTTAAA 63 GTGTCAGCAG TTGTCATGAT TGCAGACTTA ATAGCTGCAG GAGACCAATC AGGATGTGTG 64404 |||| ||| | |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| GTGTAAGCGG TTGTCATGAT TGCAGACTTA ATAGCAGCAG GAGACCAATC AGGATGTGTG 123 CTCTTCAGCA GAGCTGCTAC GCCACTAAGG TGAGGGCAAG ACATTGAGGT GCCTGATATA 64464 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| CTCTTCAGCA GAGCTGCTAC GCCACTAAGG TGAGGGCAAG ACATCGAGGT GCCTGATATA 183 ATATTGAATG TGGATTTGGT GTCCTTGTTG TCATCCACGG AGGTAGGCCA AGCAGCAAGG 64524 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| ATATTGAATG TGGATTTGGT TTTTTTGTTG TCATCCACGG AGGTAGGCCA AGCAGCAAGG 243 ATATTAACAC CAGGACCGAT TATGTCAGGT TTCAAGATGC CAGGACTAGC TCTACTTGGT 64584 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| | || ||||| ATATTAACAC CAGGACCGAT TATGTCAGGT TTCAAGATGC CAGGACTAGG TTTATTTGGT 303 CCTCTTGAGG AAAATGCAGC AACCATAGGA GCATTTTTAT CTCCAATTAT TGTTCCTTGG 64644 || | || | |||||| ||| ||| || ||| || |||| || |||||||||| |||||||||| CCGCGAGAAG AAAATGAAGC AACTATGGGA GCGTTTTCAT CTCCAATTAT TGTTCCTTGG 363 AATGCGATTG TAGCAACAGG GTTTGATGTT GAATTCATAT AAGCAAGGAT TTTTGTTCCA 64704 |||| |||| |||| ||| ||||||| || || || ||| ||| ||| || | | ||||| AATGTGATTT TAGCTGTAGG GTTTGATATT GAGTTTGTAT AAGTAAGAAT TCTGATTCCA 423 TCTGCATCTG AAACATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTAACACCG 64764 |||||| ||| |||| ||||| ||||||||| |||||||||| |||||||||| || ||||| TCTGCAGCTG AAACCTCCAA AGCTGGAAGA ACATGAGCAT CAGCTGATTT TGTGACACCA 483 TCATCTGGAC TGTTGATGAT AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT 64824 || ||||| ||||||| |||||| ||| |||||||||| |||||||||| |||||||||| TCTTCTGGCA GGTTGATGGC AATCATACCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT 543 TTATCAACAA TGGTTACACC ACCGAATGCT AAACATAACA CTATCTTTCC TCTTATGGCA 64884 || |||| | | || | ||| || |||||| | |||||||||| | |||| ||| TTTACAACCT TAGAAACGAC ACC---TGGA TAACATATGA CTATCTTTCC TTTTATTGCA 600 GGGTC 64889 ||||| GGGTC 605 hqPGS_C08HBa0165B06.1+_SGN-E308535- (64285 64889) ******************************************************************************** EST sequence 365 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 63461 to 66107): Exon 1 64350 65012 ( 663 n); cDNA 1 663 ( 663 n); score: 0.917 MATCH C08HBa0165B06.1+ SGN-E397025- 0.917 663 1.000 C PGS_C08HBa0165B06.1+_SGN-E397025- (64350 65012) Alignment (genomic DNA sequence = upper lines): AGCAGTTGTC ATGATTGCAG ACTTAATAGC TGCAGGAGAC CAATCAGGAT GTGTGCTCTT 64409 ||| |||||| || ||||||| | |||||| | ||||||||| |||||||||| |||||| || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATAATATT 64469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTCCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 64529 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCGATTATGT CAGGTTTCAA GATGCCAGGA CTAGCTCTAC TTGGTCCTCT 64589 | |||||||| |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTATCTCCA ATTATTGTTC CTTGGAATGC 64649 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGTAGCA ACAGGGTTTG ATGTTGAATT CATATAAGCA AGGATTTTTG TTCCATCTGC 64709 ||||||||| |||||| ||| ||||||| || ||| |||||| || ||||||| |||| ||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 ATCTGAAACA TCCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTAA CACCGTCATC 64769 | |||||||| ||||||||| |||||||||| |||||||||| |||||||| | |||| | | AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TGGACTGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 64829 || |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACAATGGTT ACACCACCGA ATGCTAAACA TAACACTATC TTTCCTCTTA TGGCAGGGTC 64889 |||| ||| | ||| |||| |||| |||| ||| |||||| |||||||||| | |||||||| AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 AGTGAGCGAC CCTGGTCTGC AATAAGGGGT TTTAAATTCA TCACTTGCAT TTTTTGCAGC 64949 |||||| || ||| |||||| |||||||||| || || | || |||||| |||||||||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCAAATAAT GTGAAGAAGG TTGAGTTGGA AATCTGTGGA CGATAAGCAG ATTCTCCTTG 65009 |||||||| |||||||| | ||| |||||| ||||| |||| |||||||||| ||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 AAA 65012 ||| AAA 663 hqPGS_C08HBa0165B06.1+_SGN-E397025- (64350 65012) ******************************************************************************** EST sequence 171 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 63429 to 67766): Exon 1 64444 65063 ( 620 n); cDNA 1 617 ( 617 n); score: 0.848 MATCH C08HBa0165B06.1+ SGN-E306389- 0.848 620 1.005 C PGS_C08HBa0165B06.1+_SGN-E306389- (64444 65063) Alignment (genomic DNA sequence = upper lines): GACATTGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACG 64503 ||||| |||| ||| |||||| |||||||||| |||||||||| | | ||||| |||||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 64563 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAGGACTAG CTCTACTTGG TCCTCTTGAG GAAAATGCAG CAACCATAGG AGCATTTTTA 64623 |||||||||| | || |||| ||| | || ||||||| || |||| || || ||| |||| | CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA TTGTTCCTTG GAATGCGATT GTAGCAACAG GGTTTGATGT TGAATTCATA 64683 |||||||||| |||||||||| ||||| |||| |||| || |||||||| | ||| || || TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAAGCAAGGA TTTTTGTTCC ATCTGCATCT GAAACATCCA ATGCTGGAAG AACATGAGCA 64743 |||| ||| | || | |||| ||||||| || ||||| |||| | |||||||| |||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGATT TAGTAACACC GTCATCTGGA CTGTTGATGA TAATCATGCC AACACCTCCA 64803 |||||||||| | || ||||| || ||||| ||||||| |||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTCA CAGCTTGTCC TTTATCAACA ATGGTTACAC CACCGAATGC TAAACATAAC 64863 |||||||||| |||||||||| ||| |||| | | || |||| || |||||| GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACC---TGG ATAACATATG 417 ACTATCTTTC CTCTTATGGC AGGGTCAGTG AGCGACCCTG GTCTGCAATA AGGGGTTTTA 64923 |||||||||| || |||| || |||||||||| || ||||||| || |||| || |||||||||| ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 AATTCATCAC TTGCATTTTT TGCAGCATCA AATAATGTGA AGAAGGTTGA GTTGGAAATC 64983 || ||||| | | ||| || ||||||| | | |||| |||| |||| || ||||||| GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TGTGGACGAT AAGCAGATTC TCCTTGAAAT TCCTCTCTAT TTCCAAGCTT AACAGTAGCT 65043 |||||||||| ||| || ||| |||| |||| |||||| ||| ||||||| | ||||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTATCTTTC TGTCAAGGGT 65063 |||||||||| | ||| || TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1+_SGN-E306389- (64444 65063) ******************************************************************************** EST sequence 226 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 59581 to 65881): Exon 1 64511 65281 ( 771 n); cDNA 1 771 ( 771 n); score: 0.824 MATCH C08HBa0165B06.1+ SGN-E540271- 0.824 771 1.000 C PGS_C08HBa0165B06.1+_SGN-E540271- (64511 65281) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGATATTA ACACCAGGAC CGATTATGTC AGGTTTCAAG ATGCCAGGAC 64570 |||||||||| ||||| ||| |||||||||| |||||||||| |||||| ||| |||||||||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGCTCTACT TGGTCCTCTT GAGGAAAATG CAGCAACCAT AGGAGCATTT TTATCTCCAA 64630 | ||| || |||||||| | |||||||||| |||||| || |||||||||| || ||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTATTGTTCC TTGGAATGCG ATTGTAGCAA CAGGGTTTGA TGTTGAATTC ATATAAGCAA 64690 ||| ||||| ||||| | | |||| ||||| | || ||||| | ||| ||| ||||| |||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GGATTTTTGT TCCATCTGCA TCTGAAACAT CCAATGCTGG AAGAACATGA GCATCAGCTG 64750 | ||||| | |||||| ||| | |||||||| ||||||| || ||| |||||| || ||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTAAC ACCGTCATCT GGACTGTTGA TGATAATCAT GCCAACACCT CCAGCATCCT 64810 ||||||| || ||| || ||| | |||| ||| |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TCACAGCTTG TCCTTTATCA ACAATGGTTA CACCACCGAA TGCTAAACAT AACACTATCT 64870 | || | ||| ||||| | || || || | || | ||||| || ||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TTCCTCTTAT GGCAGGGTCA GTGAGCGACC CTGGTCTGCA ATAAGGGGTT TTAAATTCAT 64930 | ||| | || ||||||||| | || || | |||| || || | |||| | |||||| || TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CACTTGCATT TTTTGCAGCA TCAAATAATG TGAAGAAGGT TGAGTTGGAA ATCTGTGGAC 64990 ||||| |||| ||| ||||| ||| ||| | |||||| || |||||||||| ||| |||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTGA AATTCCTCTC TATTTCCAAG CTTAACAGTA GCTTTTATCT 65050 |||||||||| |||||||| | |||||||| | |||||||||| |||||||||| | || | | GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTGTCAAG GGTGCTGGCA CCTACTGTAA GAATCCAAGG GGCTGAGTTA TCTACTGAGC 65110 |||| ||| | || |||||| || || || | ||||||| || |||| ||| |||| | || TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 CATGGAATGG ACCATCATTG CCTGCTGAGC AACTAACAAG AATGCCTCTT TCTGTTGCAC 65170 || | | || ||| |||| ||||||||| ||| |||| ||| |||||| |||||||||| CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TGTATGCCCC CATAGCAATA CTGTCTTCAT AGAGAGGGAT TGGACTTCCA CCAAGAGAGA 65230 |||| | ||| | ||||||| | || |||| || ||| | || ||||||| ||||| |||| TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 720 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 65281 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 771 hqPGS_C08HBa0165B06.1+_SGN-E540271- (64511 65281) ******************************************************************************** EST sequence 272 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 63822 to 65582): Exon 1 64513 64874 ( 362 n); cDNA 1 362 ( 362 n); score: 0.887 MATCH C08HBa0165B06.1+ SGN-E200689- 0.887 362 1.000 C PGS_C08HBa0165B06.1+_SGN-E200689- (64513 64874) Alignment (genomic DNA sequence = upper lines): CAAGCAGCAA GGATATTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT GCCAGGACTA 64572 |||||||| | |||||||||| ||||||||| |||||||||| |||||||||| |||||| || CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GCTCTACTTG GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT ATCTCCAATT 64632 | | |||||| |||| | || ||||||||| ||||| || | |||||||||| |||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 ATTGTTCCTT GGAATGCGAT TGTAGCAACA GGGTTTGATG TTGAATTCAT ATAAGCAAGG 64692 | |||||||| ||| || ||| |||||||||| ||||| ||| |||| || | ||| ||| | ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTTTTGTTC CATCTGCATC TGAAACATCC AATGCTGGAA GAACATGAGC ATCAGCTGAT 64752 ||||| ||| |||||||| | ||||||| || |||||||||| |||||||||| |||||||||| ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTAACAC CGTCATCTGG ACTGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC 64812 ||||| |||| | | | || ||||||| | |||||||| |||||||||| |||||||||| TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 300 ACAGCTTGTC CTTTATCAAC AATGGTTACA CCACCGAATG CTAAACATAA CACTATCTTT 64872 |||||||||| |||||||||| | ||| |||| || ||||||| |||||||||| ||||||||| ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 360 CC 64874 || CC 362 hqPGS_C08HBa0165B06.1+_SGN-E200689- (64513 64874) ******************************************************************************** EST sequence 156 -strand 490 n (File: SGN-E282432-) 1 GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 61 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 121 GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 181 CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 241 CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 301 CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 361 CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 421 TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 481 ATCCTTCAAA Predicted gene structure (within gDNA segment 63544 to 66107): Exon 1 64523 65012 ( 490 n); cDNA 1 490 ( 490 n); score: 0.896 MATCH C08HBa0165B06.1+ SGN-E282432- 0.896 490 1.000 C PGS_C08HBa0165B06.1+_SGN-E282432- (64523 65012) Alignment (genomic DNA sequence = upper lines): GGATATTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT GCCAGGACTA GCTCTACTTG 64582 |||||||| | |||||| ||| |||||||||| | |||||||| ||||||||| |||||||||| GGATATTAGC ACCAGGCCCG ATTATGTCAG GCTTCAAGAT TCCAGGACTA GCTCTACTTG 60 GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT ATCTCCAATT ATTGTTCCTT 64642 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GTCCTCTTGA GGAAAATGCA GCAACCATAG GAGCATTTTT GTCTCCAATT ATTGTTCCTT 120 GGAATGCGAT TGTAGCAACA GGGTTTGATG TTGAATTCAT ATAAGCAAGG ATTTTTGTTC 64702 ||||||| || |||||||||| ||| |||||| |||| ||||| |||||||| |||||||||| GGAATGCAAT TGTAGCAACA GGGCTTGATG TTGAGTTCAT GTAAGCAAGA ATTTTTGTTC 180 CATCTGCATC TGAAACATCC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTAACAC 64762 | |||||| | ||||||| || |||||||||| |||||||||| |||||||||| ||||| |||| CGTCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC 240 CGTCATCTGG ACTGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 64822 | | | || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATTGTGA TGGGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 300 CTTTATCAAC AATGGTTACA CCACCGAATG CTAAACATAA CACTATCTTT CCTCTTATGG 64882 |||||||||| | ||| |||| |||| || || ||||||| ||||||||| |||||||| | CTTTATCAAC ATTGGCTACA TGGCCGAGTG CTGAACATAA TACTATCTTT CCTCTTATAG 360 CAGGGTCAGT GAGCGACCCT GGTCTGCAAT AAGGGGTTTT AAATTCATCA CTTGCATTTT 64942 |||||||||| ||| || ||| ||||||||| ||||||||| || ||| ||||||||| CAGGGTCAGT GAGTGAACCT CGTCTGCAAT AAGGGGTTTC GGATGGATCT TTTGCATTTT 420 TTGCAGCATC AAATAATGTG AAGAAGGTTG AGTTGGAAAT CTGTGGACGA TAAGCAGATT 65002 |||||||||| ||||| ||| ||||| |||| ||||||||| || ||||||| |||||| | TTGCAGCATC AAATAGAGTG AAGAATGTTG CGTTGGAAAT CTTTGGACGA TAAGCAAAAA 480 CTCCTTGAAA 65012 ||||| ||| ATCCTTCAAA 490 hqPGS_C08HBa0165B06.1+_SGN-E282432- (64523 65012) ******************************************************************************** EST sequence 377 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 63292 to 65868): Exon 1 64543 65034 ( 492 n); cDNA 3 494 ( 492 n); score: 0.888 MATCH C08HBa0165B06.1+ SGN-E210009- 0.888 492 0.996 C PGS_C08HBa0165B06.1+_SGN-E210009- (64543 65034) Alignment (genomic DNA sequence = upper lines): ATTATGTCAG GTTTCAAGAT GCCAGGACTA GCTCTACTTG GTCCTCTTGA GGAAAATGCA 64602 |||||||||| |||||||||| |||||| || | | |||||| |||| | || ||||||||| ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG GTCCGCGAGA AGAAAATGCA 62 GCAACCATAG GAGCATTTTT ATCTCCAATT ATTGTTCCTT GGAATGCGAT TGTAGCAACA 64662 ||||| || | |||||||||| |||||||||| | |||||||| ||| || ||| |||||||||| GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT GGATTGTGAT TGTAGCAACA 122 GGGTTTGATG TTGAATTCAT ATAAGCAAGG ATTTTTGTTC CATCTGCATC TGAAACATCC 64722 ||||| ||| |||| || | ||| ||| | ||||| ||| |||||||| | ||||||| || GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC CATCTGCAGC TGAAACAACC 182 AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTAACAC CGTCATCTGG ACTGTTGATG 64782 |||||||||| |||||||||| |||||||||| ||||| |||| | | | || ||||||| AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTGTGA TGGGTTGATG 242 ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC AATGGTTACA 64842 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ACAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC ATTGGCTACA 302 CCACCGAATG CTAAACATAA CACTATCTTT CCTCTTATGG CAGGGTCAGT GAGCGACCCT 64902 || ||||||| |||||||||| ||||||||| |||||||| | |||||||||| ||| |||||| CCGCCGAATG CTAAACATAA TACTATCTTT CCTCTTATAG CAGGGTCAGT GAGTGACCCT 362 GGTCTGCAAT AAGGGGTTTT AAATTCATCA CTTGCATTTT TTGCAGCATC AAATAATGTG 64962 ||||||||| ||||||||| | || ||| ||||||||| |||||||||| ||||| ||| CGTCTGCAAT AAGGGGTTTC AGATGGATCT TTTGCATTTT TTGCAGCATC AAATAGAGTG 422 AAGAAGGTTG AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTGAAA TTCCTCTCTA 65022 ||||| |||| |||||||||| || ||||||| |||||||||| |||||| ||| |||||||| | AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT CTCCTTCAAA TTCCTCTCCA 482 TTTCCAAGCT TA 65034 ||||| |||| || TTTCCGAGCT TA 494 hqPGS_C08HBa0165B06.1+_SGN-E210009- (64543 65034) ******************************************************************************** EST sequence 206 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 63171 to 65881): Exon 1 64627 65281 ( 655 n); cDNA 1 655 ( 655 n); score: 0.879 MATCH C08HBa0165B06.1+ SGN-E335107- 0.879 655 1.000 C PGS_C08HBa0165B06.1+_SGN-E335107- (64627 65281) Alignment (genomic DNA sequence = upper lines): CCAATTATTG TTCCTTGGAA TGCGATTGTA GCAACAGGGT TTGATGTTGA ATTCATATAA 64686 |||||||||| |||||||||| ||| |||||| ||||||||| |||||||||| ||||| ||| CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCAAGGATTT TTGTTCCATC TGCATCTGAA ACATCCAATG CTGGAAGAAC ATGAGCATCA 64746 ||||| |||| ||||||| || |||| ||||| ||| |||||| |||||||||| |||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGATTTAG TAACACCGTC ATCTGGACTG TTGATGATAA TCATGCCAAC ACCTCCAGCA 64806 |||||||||| | ||||| | | || | |||||||||| |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 180 TCCTTCACAG CTTGTCCTTT ATCAACAATG GTTACACCAC CGAATGCTAA ACATAACACT 64866 |||||||||| |||||||||| ||||||| || | |||| | ||| |||| | |||||| ||| TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 240 ATCTTTCCTC TTATGGCAGG GTCAGTGAGC GACCCTGGTC TGCAATAAGG GGTTTTAAAT 64926 |||||||||| |||| ||||| ||||||||| || ||| ||| |||||||||| ||||| || ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 300 TCATCACTTG CATTTTTTGC AGCATCAAAT AATGTGAAGA AGGTTGAGTT GGAAATCTGT 64986 ||| ||| |||||||||| |||||||||| | ||||||| | |||| ||| |||||||| | GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 360 GGACGATAAG CAGATTCTCC TTGAAATTCC TCTCTATTTC CAAGCTTAAC AGTAGCTTTT 65046 |||||||||| |||||||||| || ||||||| |||| ||||| ||||| |||| |||||||||| GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 420 ATCTTTCTGT CAAGGGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGA GTTATCTACT 65106 |||||||||| |||| ||||| ||||||||| |||||||||| ||||||| | ||| || || ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 480 GAGCCATGGA ATGGACCATC ATTGCCTGCT GAGCAACTAA CAAGAATGCC TCTTTCTGTT 65166 | | | | |||||||| ||| || || || ||||| | ||||||| || |||||| ||| GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 540 GCACTGTATG CCCCCATAGC AATACTGTCT TCATAGAGAG GGATTGGACT TCCACCAAGA 65226 |||||||| | |||| ||||| |||| ||||| || || || ||||||||| ||||| ||| GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 600 GAGATTGAAA GAATATCTAC ACCATCATCT ATAGCTGCAT CCATGGCAGC TAAAA 65281 || ||||||| |||||||||| ||||||||| ||||||| || |||||||||| ||||| GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA 655 hqPGS_C08HBa0165B06.1+_SGN-E335107- (64627 65281) ******************************************************************************** EST sequence 393 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 63263 to 66081): Exon 1 64641 65192 ( 552 n); cDNA 1 555 ( 555 n); score: 0.883 MATCH C08HBa0165B06.1+ SGN-E208913- 0.883 552 0.993 C PGS_C08HBa0165B06.1+_SGN-E208913- (64641 65192) Alignment (genomic DNA sequence = upper lines): TTGGAATGCG ATTGTAGCAA CAGGGTTTGA TGTTGAATTC ATATAAGCAA GGATTTTTGT 64700 ||||| || | |||||||||| ||||||| || | |||| || |||| ||| | ||||| | TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCATCTGCA TCTGAAACAT CC---AATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 64757 |||||||||| |||||||| || ||||| |||||||||| |||||||||| |||||||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 AACACCGTCA TCTGGACTGT TGATGATAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 64817 ||||| | | || || |||||| ||| |||||||||| |||||||||| |||||||||| GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 180 TTGTCCTTTA TCAACAATGG TTACACCACC GAATGCTAAA CATAACACTA TCTTTCCTCT 64877 |||||||||| |||||| ||| |||||| || |||||||||| ||||| |||| |||||||||| TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 240 TATGGCAGGG TCAGTGAGCG ACCCTGGTCT GCAATAAGGG GTTTTAAATT CATCACTTGC 64937 ||| |||||| |||||||| | ||||| |||| |||||||||| |||| | || ||| |||| TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 300 ATTTTTTGCA GCATCAAATA ATGTGAAGAA GGTTGAGTTG GAAATCTGTG GACGATAAGC 64997 |||||||||| |||||||||| |||||||| ||||||||| ||||||| || |||||||||| ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 360 AGATTCTCCT TGAAATTCCT CTCTATTTCC AAGCTTAACA GTAGCTTTTA TCTTTCTGTC 65057 |||||||||| | |||||||| ||| |||||| |||||| || |||||||||| ||||||| || AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 420 AAGGGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGCCATGGAA 65117 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| || || | | AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 480 TGGACCATCA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTCTGTTG CACTGTATGC 65177 ||||||| | |||||||||| |||||||||| |||||||||| |||| ||||| ||||||| || AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 540 CCCCATAGCA ATACT 65192 ||| | |||| ||||| CCCGAGAGCA ATACT 555 hqPGS_C08HBa0165B06.1+_SGN-E208913- (64641 65192) ******************************************************************************** EST sequence 254 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 61501 to 66006): Exon 1 64703 65280 ( 578 n); cDNA 1 578 ( 578 n); score: 0.803 MATCH C08HBa0165B06.1+ SGN-E286017- 0.803 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E286017- (64703 65280) Alignment (genomic DNA sequence = upper lines): CATCTGCATC TGAAACATCC AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTAACAC 64762 |||| |||| |||||||||| ||||| |||| | |||||||| |||| |||| ||||| |||| CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 60 CGTCATCTGG ACTGTTGATG ATAATCATGC CAACACCTCC AGCATCCTTC ACAGCTTGTC 64822 | || ||| | |||||| | |||||||| |||||||||| ||||||||| || | ||||| CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 120 CTTTATCAAC AATGGTTACA CCACCGAATG CTAAACATAA CACTATCTTT CCTCTTATGG 64882 ||| | |||| || | | | | ||||| || |||||||| ||| | || | CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 180 CAGGGTCAGT GAGCGACCCT GGTCTGCAAT AAGGGGTTTT AAATTCATCA CTTGCATTTT 64942 |||||||| | || || ||| || || ||| |||| | | ||||| |||| ||| |||| | CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 240 TTGCAGCATC AAATAATGTG AAGAAGGTTG AGTTGGAAAT CTGTGGACGA TAAGCAGATT 65002 || ||||||| | ||| | | ||||| |||| |||||||| | || |||| || |||||||||| TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 300 CTCCTTGAAA TTCCTCTCTA TTTCCAAGCT TAACAGTAGC TTTTATCTTT CTGTCAAGGG 65062 |||||| ||| |||||| ||| |||||||||| |||||||| | || | ||| || ||| | | CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 360 TGCTGGCACC TACTGTAAGA ATCCAAGGGG CTGAGTTATC TACTGAGCCA TGGAATGGAC 65122 | |||||||| || || ||| ||||| |||| || ||| | ||| | |||| | | |||| TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 420 CATCATTGCC TGCTGAGCAA CTAACAAGAA TGCCTCTTTC TGTTGCACTG TATGCCCCCA 65182 | |||||| || |||| | || |||| || | |||||||| |||||||||| || | ||| | CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 480 TAGCAATACT GTCTTCATAG AGAGGGATTG GACTTCCACC AAGAGAGATT GAAAGAATAT 65242 |||||||| || |||| | | ||| ||| ||||||||| ||| |||||| |||||||||| GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 540 CTACACCATC ATCTATAGCT GCATCCATGG CAGCTAAA 65280 |||||||||| |||||||||| |||| |||| |||||||| CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA 578 hqPGS_C08HBa0165B06.1+_SGN-E286017- (64703 65280) ******************************************************************************** EST sequence 303 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 64069 to 65892): Exon 1 64715 65292 ( 578 n); cDNA 1 578 ( 578 n); score: 0.853 MATCH C08HBa0165B06.1+ SGN-E244401- 0.853 578 1.000 C PGS_C08HBa0165B06.1+_SGN-E244401- (64715 65292) Alignment (genomic DNA sequence = upper lines): AAACATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGATTT AGTAACACCG TCATCTGGAC 64774 ||| |||||| |||||||||| |||||||||| |||||| ||| ||| ||||| | | || AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 60 TGTTGATGAT AATCATGCCA ACACCTCCAG CATCCTTCAC AGCTTGTCCT TTATCAACAA 64834 | ||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||| ||||| TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 120 TGGTTACACC ACCGAATGCT AAACATAACA CTATCTTTCC TCTTATGGCA GGGTCAGTGA 64894 ||| || || |||| |||| | |||||| | |||||||||| |||||| || ||| | ||| TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 180 GCGACCCTGG TCTGCAATAA GGGGTTTTAA ATTCATCACT TGCATTTTTT GCAGCATCAA 64954 | |||||||| | |||||||| ||||||| || ||| | ||||| |||| |||||||||| GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 240 ATAATGTGAA GAAGGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTGAAATT 65014 ||| ||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||| |||| ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 300 CCTCTCTATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT GTCAAGGGTG CTGGCACCTA 65074 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 360 CTGTAAGAAT CCAAGGGGCT GAGTTATCTA CTGAGCCATG GAATGGACCA TCATTGCCTG 65134 |||||||||| |||||||||| | || | | ||||| || | || || || ||| |||| CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 420 CTGAGCAACT AACAAGAATG CCTCTTTCTG TTGCACTGTA TGCCCCCATA GCAATACTGT 65194 | || ||||| |||| || |||||| | | |||||||||| |||||| | | |||||| || CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 480 CTTCATAGAG AGGGATTGGA CTTCCACCAA GAGAGATTGA AAGAATATCT ACACCATCAT 65254 | ||||||| || | | ||| |||||||| || || || |||||||||| || ||||||| CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 540 CTATAGCTGC ATCCATGGCA GCTAAAATAT CACTGTCA 65292 ||||||||| |||||||||| |||||||||| |||||||| CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA 578 hqPGS_C08HBa0165B06.1+_SGN-E244401- (64715 65292) ******************************************************************************** EST sequence 312 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 63655 to 65892): Exon 1 64733 65292 ( 560 n); cDNA 1 560 ( 560 n); score: 0.848 MATCH C08HBa0165B06.1+ SGN-E244422- 0.848 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E244422- (64733 65292) Alignment (genomic DNA sequence = upper lines): GAACATGAGC ATCAGCTGAT TTAGTAACAC CGTCATCTGG ACTGTTGATG ATAATCATGC 64792 |||||||||| |||||||| | ||||| || | | | | || | |||||| | |||||||| GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 60 CAACACCTCC AGCATCCTTC ACAGCTTGTC CTTTATCAAC AATGGTTACA CCACCGAATG 64852 |||||||||| |||||||||| ||| ||| || ||||| |||| | ||| || |||||| || CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 120 CTAAACATAA CACTATCTTT CCTCTTATGG CAGGGTCAGT GAGCGACCCT GGTCTGCAAT 64912 ||| |||||| ||||||||| |||||||| ||||| | | ||| |||||| ||| |||||| CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 180 AAGGGGTTTT AAATTCATCA CTTGCATTTT TTGCAGCATC AAATAATGTG AAGAAGGTTG 64972 ||||||||| || ||| |||||| || |||||||||| ||||| ||| ||||| |||| AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 240 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTGAAA TTCCTCTCTA TTTCCAAGCT 65032 |||||||||| |||||||||| |||||||||| |||||| || |||||||| | |||||||||| AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 300 TAACAGTAGC TTTTATCTTT CTGTCAAGGG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 65092 |||||||||| |||||||||| || ||||| | |||||||||| |||||||||| |||||||||| TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 360 CTGAGTTATC TACTGAGCCA TGGAATGGAC CATCATTGCC TGCTGAGCAA CTAACAAGAA 65152 ||| || | |||||| || | || || | | ||| || ||| || ||| || |||| || CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 420 TGCCTCTTTC TGTTGCACTG TATGCCCCCA TAGCAATACT GTCTTCATAG AGAGGGATTG 65212 |||||| | ||||||||| |||||||| | ||||||| ||| |||||| | || | | | CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 480 GACTTCCACC AAGAGAGATT GAAAGAATAT CTACACCATC ATCTATAGCT GCATCCATGG 65272 || |||||| || || || |||||||||| |||| ||||| |||||||||| | |||||||| GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 540 CAGCTAAAAT ATCACTGTCA 65292 |||||||||| |||||||||| CAGCTAAAAT ATCACTGTCA 560 hqPGS_C08HBa0165B06.1+_SGN-E244422- (64733 65292) ******************************************************************************** EST sequence 261 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 64326 to 66630): Exon 1 64936 65399 ( 464 n); cDNA 1 464 ( 464 n); score: 0.903 MATCH C08HBa0165B06.1+ SGN-E202140- 0.903 464 0.998 C PGS_C08HBa0165B06.1+_SGN-E202140- (64936 65399) Alignment (genomic DNA sequence = upper lines): GCATTTTTTG CAGCATCAAA TAATGTGAAG AAGGTTGAGT TGGAAATCTG TGGACGATAA 64995 |||||||||| |||||||||| || |||||| || ||||||| ||||||||| |||||||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTGAAATTC CTCTCTATTT CCAAGCTTAA CAGTAGCTTT TATCTTTCTG 65055 |||||||||| ||| |||||| ||||| |||| || |||||| |||||||||| ||||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCAAGGGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGCCATGG 65115 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||| || | TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 AATGGACCAT CATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTCTGT TGCACTGTAT 65175 | ||||||| ||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCCATAG CAATACTGTC TTCATAGAGA GGGATTGGAC TTCCACCAAG AGAGATTGAA 65235 ||||| | || ||||||| || ||||| ||| || | || |||||||| || || ||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 300 AGAATATCTA CACCATCATC TATAGCTGCA TCCATGGCAG CTAAAATATC ACTGTCAGAA 65295 |||||||||| | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 360 CAACCATCAG AACTACACAC CTTATATATG GCTATGTGGG CAAGAGGGGC AACACCAACA 65355 |||||| ||| | ||||||| |||||||||| ||||| |||| ||||||| || ||||||||| CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 420 GCAGTGCCAT TAGCATTCCC AAATACATTA GCACCTTTCA CAAA 65399 ||||| |||| ||||||| | | |||||||| |||||||||| |||| GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAA 464 hqPGS_C08HBa0165B06.1+_SGN-E202140- (64936 65399) ******************************************************************************** EST sequence 189 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 63888 to 67847): Exon 1 65257 66032 ( 776 n); cDNA 1 779 ( 779 n); score: 0.901 MATCH C08HBa0165B06.1+ SGN-E539488- 0.901 776 0.996 C PGS_C08HBa0165B06.1+_SGN-E539488- (65257 66032) Alignment (genomic DNA sequence = upper lines): ATAGCTGCAT CCATGGCAGC TAAAATATCA CTGTCAGAAC AA---CCATC AGAACTACAC 65313 |||||||||| |||||||||| ||||||||| |||||||||| | ||||| ||||||||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA TGGCTATGTG GGCAAGAGGG GCAACACCAA CAGCAGTGCC ATTAGCATTC 65373 |||||||||| |||||||| ||| |||||| |||||||||| ||||||| || |||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCAAATACAT TAGCACCTTT CACAAAGGCT CCTGCAGCTG TGCTTGCTGT GTGTGTACCA 65433 ||||||| || |||||||||| |||||||||| || ||||||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCATCAT CGTCTATCGG GGAACCATTG GCAAGTTGGT AAGACCTCGC TCCAATGAGC 65493 ||||||| || | |||||||| |||||||||| ||||||| | ||||||| || |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGTTTGT GAAATTGGAC TCGCAAACTC CCTTCCACTT AGCAGGTGGG 65553 |||||||||| |||| | || |||||||||| || ||||||| | |||||||| |||||| ||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GAAGGCATCC CAACGTCGCT AAGTGAAGGA TGGTCAGGAA CGATTCCAGT GTCTATAACT 65613 | |||||||| |||| || || || ||||||| || ||||||| |||||||| ||||| |||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCAATGATCA CGCCTTTCCC ATAGTTGGAA TCCTTCCACA AGCCCATGTT CTGTTGCAAA 65673 || ||||||| | ||| || | | |||||| || ||||||| |||||||||| |||||||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTGTGC AAGGACAAAA TCCTCTGTTT CTGAGCAGAG 65733 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTCTTCTC CATTTCCTTC ACTTGTTCTG CCGTTAATCT TGCTGCAAAC 65793 |||||||||| |||| ||||| |||||||||| |||||| ||| | |||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTGTCATCA CATTGTGATA GGAATAGATC ATGGTAGCAG CCTCTTCATT TCCACTCGAA 65853 ||| |||||| ||||||| || ||| |||||| ||| |||||| ||||||||| ||||||||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGTGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTATCTAA ATCCGTTAAC 65913 ||||||| || |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTGAG TAGTAATTAG GCTTTCTGGG GATTCAACAT GGACGATATA AGTCTCGAGA 65973 |||||||||| ||| |||| | | |||| || |||||||||| |||| ||||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TCACTCTGAA TAGTAGGCCA TGGGAAAGAA CAAAAGATGA AAACAAAAAG GATTTTGAA 66032 |||||||||| || |||||| | ||||||| ||||| |||| | | || ||| ||||| || TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1+_SGN-E539488- (65257 66032) ******************************************************************************** EST sequence 331 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 63757 to 66832): Exon 1 65519 66058 ( 540 n); cDNA 1 540 ( 540 n); score: 0.939 MATCH C08HBa0165B06.1+ SGN-E207645- 0.939 540 0.978 C PGS_C08HBa0165B06.1+_SGN-E207645- (65519 66058) Alignment (genomic DNA sequence = upper lines): TGGACTCGCA AACTCCCTTC CACTTAGCAG GTGGGGAAGG CATCCCAACG TCGCTAAGTG 65578 ||| ||| || |||||| ||| |||||||||| | |||| ||| ||||||||| ||||||| || TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGGTC AGGAACGATT CCAGTGTCTA TAACTCCAAT GATCACGCCT TTCCCATAGT 65638 ||||||| || ||||| ||| |||||||||| |||||| || |||||||||| | ||| | | AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCCTT CCACAAGCCC ATGTTCTGTT GCAAACCAAG AAAACTTGGA GTATGAGTAG 65698 ||||||| || |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TGTGCAAGGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTC TTCTCCATTT 65758 ||||||| || |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TTCTGCCGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAGGAAT 65818 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATGGT AGCAGCCTCT TCATTTCCAC TCGAACTAAT TGTGGTAGTA GTTTTAGGCA 65878 ||||||| || |||||||||| |||||||||| | || ||||| || ||||||| |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAAAG GTAATAGCTA TCTAAATCCG TTAACGATGA TTGAGTAGTA ATTAGGCTTT 65938 |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CTGGGGATTC AACATGGACG ATATAAGTCT CGAGATCACT CTGAATAGTA GGCCATGGGA 65998 | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAACAAAA GATGAAAACA AAAAGGATTT TGAAGAATCC CATGGCTGCA AATACAAGAA 66058 | |||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||| ||||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 540 hqPGS_C08HBa0165B06.1+_SGN-E207645- (65519 66058) ******************************************************************************** EST sequence 409 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 64468 to 67254): Exon 1 65528 66058 ( 531 n); cDNA 1 532 ( 532 n); score: 0.937 MATCH C08HBa0165B06.1+ SGN-E330205- 0.937 531 0.996 C PGS_C08HBa0165B06.1+_SGN-E330205- (65528 66058) Alignment (genomic DNA sequence = upper lines): AAACTCCCTT CCACTTAGCA GGTGGGGAAG GCATCCCAAC GTCGCTAAGT GAAGGATGGT 65587 ||||||| || |||||||||| || |||| || |||||||||| ||||||| |||||||||| AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAACGAT TCCAGTGTCT ATAACTCCAA TGATCACGCC TTTCCCATAG TTGGAATCCT 65647 |||||| || |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCACAAGCC CATGTTCTGT TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAGG 65707 |||| | || ||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT CTTCTCCATT TCCTTCACTT 65767 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTTCTGCCGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 65827 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGT AGTTTTAGGC AAAAAAGAAA 65887 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT ATCTAAATCC GTTAACGATG ATTGAGTAGT AATTAGGCTT TCTGGGGATT 65947 |||||||||| | |||||||| |||||| ||| |||||||||| || ||||||| || ||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC GATATAAGTC TCGAGATCAC TCTGAATAGT AGGCCATGGG AAAGAACAAA 66007 |||||||||| |||||||||| ||||||| || |||||||||| ||||||| || |||||||| | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAAAAGGATT TTGAAGAATC CCATGGCT-G CAAATACAAG AA 66058 |||||||||| || | |||| || || |||| |||||||| | | ||||||| || AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AA 532 hqPGS_C08HBa0165B06.1+_SGN-E330205- (65528 66058) ******************************************************************************** EST sequence 350 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 64896 to 67204): Exon 1 65587 66054 ( 468 n); cDNA 1 469 ( 469 n); score: 0.948 MATCH C08HBa0165B06.1+ SGN-E207387- 0.948 468 0.998 C PGS_C08HBa0165B06.1+_SGN-E207387- (65587 66054) Alignment (genomic DNA sequence = upper lines): TCAGGAACGA TTCCAGTGTC TATAACTCCA ATGATCACGC CTTTCCCATA GTTGGAATCC 65646 ||||||| | |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCACAAGC CCATGTTCTG TTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAG 65706 ||||| | | |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TCTTCTCCAT TTCCTTCACT 65766 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTTCTGCCG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 65826 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG TAGTTTTAGG CAAAAAAGAA 65886 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TATCTAAATC CGTTAACGAT GATTGAGTAG TAATTAGGCT TTCTGGGGAT 65946 |||||||||| || ||||||| ||||||| || |||||||||| ||| |||||| ||| |||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CGATATAAGT CTCGAGATCA CTCTGAATAG TAGGCCATGG GAAAGAACAA 66006 |||||||||| |||||||||| |||||||| | |||||||||| |||||||| | ||||||||| TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAAAAGGAT TTTGAAGAAT CCCATGGCT- GCAAATACA 66054 |||||||||| ||| |||||| ||| || ||| ||||||||| || |||||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA 469 hqPGS_C08HBa0165B06.1+_SGN-E207387- (65587 66054) ******************************************************************************** EST sequence 149 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 64497 to 67837): Exon 1 65596 66029 ( 434 n); cDNA 4 437 ( 434 n); score: 0.910 MATCH C08HBa0165B06.1+ SGN-E282403- 0.910 434 0.989 C PGS_C08HBa0165B06.1+_SGN-E282403- (65596 66029) Alignment (genomic DNA sequence = upper lines): ATTCCAGTGT CTATAACTCC AATGATCACG CCTTTCCCAT AGTTGGAATC CTTCCACAAG 65655 |||||||||| ||| |||||| |||||||| ||| ||| | |||||||| ||||||||| ATTCCAGTGT CTAGAACTCC GATGATCACA CCTACTCCAA AATTGGAATC TTTCCACAAG 63 CCCATGTTCT GTTGCAAACC AAGAAAACTT GGAGTATGAG TAGTGTGCAA GGACAAAATC 65715 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| CCCATGTTCT GTTGCAAACC AAGAAAACTT GGAGTATGAG TAGTATGCAA GGAGAAAATC 123 CTCTGTTTCT GAGCAGAGAC AAAGCCGTGT TTCTTCTCCA TTTCCTTCAC TTGTTCTGCC 65775 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||| |||| CTCTGTTTCT GAGCAGAGAC AAAGCCGTGT TTTTTCTCCA TTTCCTTCAC TTGTGCTGCA 183 GTTAATCTTG CTGCAAACCC TGTCATCACA TTGTGATAGG AATAGATCAT GGTAGCAGCC 65835 |||||||||| ||||||| || | |||||||| ||||| |||| | |||||||| | |||||||| GTTAATCTTG CTGCAAAACC TTTCATCACA TTGTGGTAGG AGTAGATCAT GCTAGCAGCC 243 TCTTCATTTC CACTCGAACT AATTGTGGTA GTAGTTTTAG GCAAAAAAGA AAGGTAATAG 65895 ||||||| || ||||||| || ||||| |||| |||||||||| |||||||||| |||||||||| TCTTCATCTC CACTCGAGCT AATTGCGGTA GTAGTTTTAG GCAAAAAAGA AAGGTAATAG 303 CTATCTAAAT CCGTTAACGA TGATTGAGTA GTAATTAGGC TTTCTGGGGA TTCAACATGG 65955 || ||||||| ||||||| || |||||||||| | |||| || |||| || || |||||||||| CTCTCTAAAT CCGTTAATGA TGATTGAGTA GAAATTTGGT TTTCAGGTGA TTCAACATGG 363 ACGATATAAG TCTCGAGATC ACTCTGAATA GTAGGCCATG GGAAAGAACA AAAGATGAAA 66015 || ||||||| |||||||||| |||||||||| |||||| | ||||||| || ||| ||||| ACTATATAAG TCTCGAGATC ACTCTGAATA CTAGGCCTTA GGAAAGAGCA AAATATGAAG 423 ACAAAAAGGA TTTT 66029 | || ||| | |||| ATAAGAAGAA TTTT 437 hqPGS_C08HBa0165B06.1+_SGN-E282403- (65596 66029) ******************************************************************************** EST sequence 378 -strand 416 n (File: SGN-E219208-) 1 AATGGTGTTC TTTGCGCGTT TGGTGGGACG TTTTGATGTG GCTGATGAAG TTACCCCAGT 61 CAACATTGAT AATTTTGAGT GAGGTATACA ACCCCCCGGA TGCTCTTTGC CATAATAGGT 121 TGTTCAATAC CTGTTTGCCG TAACTAGGAA AATTTTGATG ATGGAGAGAG AAGAACCAAG 181 ATGATCTAAT TTTCCGGGGT GGTAAATCGG CAATGATCAG AATTTAAAAG TACTAAATCA 241 TTCTAAAATA AGTTTAATAA GCATTAGAAG GAAATTAAAA TTAAATTATG TATTTCCCTT 301 GTCTAAATCA ATGTAAAATC AAAGAACAAA TATTTAATAT TATTGTCATT CTTAATGTTA 361 TATTGATTTC CCTTTTGCCT TAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAA Predicted gene structure (within gDNA segment 64422 to 68711): Exon 1 65816 65826 ( 11 n); cDNA 205 215 ( 11 n); score: 0.636 Intron 1 65827 67262 (1436 n); Pd: 0.180 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 67263 67409 ( 147 n); cDNA 216 344 ( 129 n); score: 0.810 PPA cDNA 382 416 MATCH C08HBa0165B06.1+ SGN-E219208- 0.810 158 0.380 C PGS_C08HBa0165B06.1+_SGN-E219208- (65816 65826,67263 67409) Alignment (genomic DNA sequence = upper lines): AATAGATCAT GGTAGCAGCC TCTTCATTTC CACTCGAACT AATTGTGGTA GTAGTTTTAG 65875 ||| | || | AATCGGCAAT G......... .......... .......... .......... .......... 215 GCAAAAAAGA AAGGTAATAG CTATCTAAAT CCGTTAACGA TGATTGAGTA GTAATTAGGC 65935 .......... .......... .......... .......... .......... .......... 215 TTTCTGGGGA TTCAACATGG ACGATATAAG TCTCGAGATC ACTCTGAATA GTAGGCCATG 65995 .......... .......... .......... .......... .......... .......... 215 GGAAAGAACA AAAGATGAAA ACAAAAAGGA TTTTGAAGAA TCCCATGGCT GCAAATACAA 66055 .......... .......... .......... .......... .......... .......... 215 GAAGTAATTT ATCTGCTTTA ATATAACTGT CTATTTATAG TGATTCTTTG CTCATCACAT 66115 .......... .......... .......... .......... .......... .......... 215 TATTTTAGCT TAGTAGGGAA AAAAAAAAGA ATAATATGGA CAAGAAAATT AAAAGTACTA 66175 .......... .......... .......... .......... .......... .......... 215 TTGAAAAAAA AAAAGAAAAG AAAGGCCACT AAGTGTGAAT TCGTATGCTA AATTGAAGCT 66235 .......... .......... .......... .......... .......... .......... 215 GTAGATTTTC CAAAAGACCA TCCACTGTAA ATTTGTTCTC GAACAGTTTT ATTTAATAAA 66295 .......... .......... .......... .......... .......... .......... 215 GTTTAACTTT GTAATAAAAA GCTGCAAATA TTATGTTGAA ATGAAGTTGC AATCCATGTT 66355 .......... .......... .......... .......... .......... .......... 215 CTCAAAAAAA TACATCTATT TAAGTGAATT ATATCAATAG AGTCGAGTTC TTATCTAAAA 66415 .......... .......... .......... .......... .......... .......... 215 TTTAGGGTGT TTAGAGAAGA TTTGAGTTGG TTGGAATTGA AAAATAGAAC ATTGTTATAG 66475 .......... .......... .......... .......... .......... .......... 215 AAAATGAATT GGTGCAATGT ATAAATAATT CGTACAATAT TGATAGATTA CTTATAGAAT 66535 .......... .......... .......... .......... .......... .......... 215 CAACCTTTTT AGTCGATTTT TTTTTTGCAG TCGTACAATT ACGCAAGAAG CCCCTCTTTT 66595 .......... .......... .......... .......... .......... .......... 215 TATGATCTTG GATAATTGTC CCCTCATAAG ATATCATGAA CCTGAATTAG AATCAAGATA 66655 .......... .......... .......... .......... .......... .......... 215 AATTCATTTC CTGATTATGG TATCAAAGGC ATTTGTATTA TGTTCCCACA TTATCTATTT 66715 .......... .......... .......... .......... .......... .......... 215 TATAATAAGA ATGTTTCTTT ATACCAAATT GAACAATCCT TACTCTATTC CGTAACTTTT 66775 .......... .......... .......... .......... .......... .......... 215 ACATGTTTTT TTAGTTCACA AATAGCAATA ATGCTTTTCA TAATTCATGT TGTTGTTTTT 66835 .......... .......... .......... .......... .......... .......... 215 TTTGAAAATT ATTGCAAGAC TTTACCATGG ATAATGTACA TTGGTTCCCT TCAATTGGAC 66895 .......... .......... .......... .......... .......... .......... 215 TTGATCTTTT TGACATGTAT ATTTGGCTAG AGATTTCTTA TTTGGCCATG ATATATTAAA 66955 .......... .......... .......... .......... .......... .......... 215 AAAATTAAAA GGTATCGATG TGAATCAATT ACGTTTTTTC TAGGAAACTC GTAGGAATGT 67015 .......... .......... .......... .......... .......... .......... 215 CTTCATTATT TTTCTTGCCC TATTAATAAG TTAAAATATC AACGTCTCAA TTACTTCTTG 67075 .......... .......... .......... .......... .......... .......... 215 AAGTCACCAA AGACTTGGAT TTTCCTTTTA GGATAATAAT ATTTTTAGTC CCTCCATTAT 67135 .......... .......... .......... .......... .......... .......... 215 TATTTGAGGT GTTTTTTTTT AAAAAAAATA ACACATGAGA TGAGTATTGA TGACACAAAA 67195 .......... .......... .......... .......... .......... .......... 215 GTATTTAATA AAAAATAATA ATGATATTAT CATTTAAAAT AAACATTGTA AAGTCATAAT 67255 .......... .......... .......... .......... .......... .......... 215 AAAAATAATC ATAATATAAA AGTACTAAAT CATGTTAAAA TAAGTTTAAT AAGTATTAGT 67315 ||| | ||| |||| |||||||||| ||| ||||| |||||||||| ||| ||||| .......ATC AGAATTTAAA AGTACTAAAT CATTCTAAAA TAAGTTTAAT AAGCATTAG- 267 TACATGACTA AATATTAAAG AAAATTAAAA TTAGACTATG TATTTCAATT GTCTAAACTA 67375 | | | || ||| |||||| ||| | |||| |||||| || ||||||| | -A-A-G---G AA-ATT---- AAAATT-AAA -T----TATG TATTTCCCTT GTCTAAATCA 310 ATGTAAAATC AAAGAACAAA TATTTAATAT TATT 67409 |||||||||| |||||||||| |||||||||| |||| ATGTAAAATC AAAGAACAAA TATTTAATAT TATT 344 hqPGS_C08HBa0165B06.1+_SGN-E219208- (67263 67409) ******************************************************************************** EST sequence 379 -strand 407 n (File: SGN-E219032-) 1 TCTTTGCGCG TTTGGTGGGA CGTTTTGATG TGGCTGATGA AGTTACCCCA GTCAACATTG 61 ATAATTTTGA GTGAGGTATA CAACCCCCGG ATGCTCTTTG CCATAATAGG TTGTTCAATA 121 CCTGTTTGCC GTAACTAGGA AAATTTTGAT GATGGAGAGA GAAGAACCAA GATGATCTAA 181 TTTTCCGGGG TGGTAAATCG GCAATGATCA GAATTTAAAA GTACTAAATC ATTCTAAAAT 241 AAGTTTAATA AGCATTAGAA GGAAATTAAA ATTAAATTAT GTATTTCCCT TGTCTAAATC 301 AATGTAAAAT CAAAGAACAA ATATTTAATA TTATTGTCAT TCTTAATGTT ATATTAATTT 361 CCCCTTTGCC TTAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 64512 to 68711): Exon 1 65816 65826 ( 11 n); cDNA 196 206 ( 11 n); score: 0.636 Intron 1 65827 67262 (1436 n); Pd: 0.180 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 67263 67409 ( 147 n); cDNA 207 335 ( 129 n); score: 0.810 PPA cDNA 373 407 MATCH C08HBa0165B06.1+ SGN-E219032- 0.810 158 0.388 C PGS_C08HBa0165B06.1+_SGN-E219032- (65816 65826,67263 67409) Alignment (genomic DNA sequence = upper lines): AATAGATCAT GGTAGCAGCC TCTTCATTTC CACTCGAACT AATTGTGGTA GTAGTTTTAG 65875 ||| | || | AATCGGCAAT G......... .......... .......... .......... .......... 206 GCAAAAAAGA AAGGTAATAG CTATCTAAAT CCGTTAACGA TGATTGAGTA GTAATTAGGC 65935 .......... .......... .......... .......... .......... .......... 206 TTTCTGGGGA TTCAACATGG ACGATATAAG TCTCGAGATC ACTCTGAATA GTAGGCCATG 65995 .......... .......... .......... .......... .......... .......... 206 GGAAAGAACA AAAGATGAAA ACAAAAAGGA TTTTGAAGAA TCCCATGGCT GCAAATACAA 66055 .......... .......... .......... .......... .......... .......... 206 GAAGTAATTT ATCTGCTTTA ATATAACTGT CTATTTATAG TGATTCTTTG CTCATCACAT 66115 .......... .......... .......... .......... .......... .......... 206 TATTTTAGCT TAGTAGGGAA AAAAAAAAGA ATAATATGGA CAAGAAAATT AAAAGTACTA 66175 .......... .......... .......... .......... .......... .......... 206 TTGAAAAAAA AAAAGAAAAG AAAGGCCACT AAGTGTGAAT TCGTATGCTA AATTGAAGCT 66235 .......... .......... .......... .......... .......... .......... 206 GTAGATTTTC CAAAAGACCA TCCACTGTAA ATTTGTTCTC GAACAGTTTT ATTTAATAAA 66295 .......... .......... .......... .......... .......... .......... 206 GTTTAACTTT GTAATAAAAA GCTGCAAATA TTATGTTGAA ATGAAGTTGC AATCCATGTT 66355 .......... .......... .......... .......... .......... .......... 206 CTCAAAAAAA TACATCTATT TAAGTGAATT ATATCAATAG AGTCGAGTTC TTATCTAAAA 66415 .......... .......... .......... .......... .......... .......... 206 TTTAGGGTGT TTAGAGAAGA TTTGAGTTGG TTGGAATTGA AAAATAGAAC ATTGTTATAG 66475 .......... .......... .......... .......... .......... .......... 206 AAAATGAATT GGTGCAATGT ATAAATAATT CGTACAATAT TGATAGATTA CTTATAGAAT 66535 .......... .......... .......... .......... .......... .......... 206 CAACCTTTTT AGTCGATTTT TTTTTTGCAG TCGTACAATT ACGCAAGAAG CCCCTCTTTT 66595 .......... .......... .......... .......... .......... .......... 206 TATGATCTTG GATAATTGTC CCCTCATAAG ATATCATGAA CCTGAATTAG AATCAAGATA 66655 .......... .......... .......... .......... .......... .......... 206 AATTCATTTC CTGATTATGG TATCAAAGGC ATTTGTATTA TGTTCCCACA TTATCTATTT 66715 .......... .......... .......... .......... .......... .......... 206 TATAATAAGA ATGTTTCTTT ATACCAAATT GAACAATCCT TACTCTATTC CGTAACTTTT 66775 .......... .......... .......... .......... .......... .......... 206 ACATGTTTTT TTAGTTCACA AATAGCAATA ATGCTTTTCA TAATTCATGT TGTTGTTTTT 66835 .......... .......... .......... .......... .......... .......... 206 TTTGAAAATT ATTGCAAGAC TTTACCATGG ATAATGTACA TTGGTTCCCT TCAATTGGAC 66895 .......... .......... .......... .......... .......... .......... 206 TTGATCTTTT TGACATGTAT ATTTGGCTAG AGATTTCTTA TTTGGCCATG ATATATTAAA 66955 .......... .......... .......... .......... .......... .......... 206 AAAATTAAAA GGTATCGATG TGAATCAATT ACGTTTTTTC TAGGAAACTC GTAGGAATGT 67015 .......... .......... .......... .......... .......... .......... 206 CTTCATTATT TTTCTTGCCC TATTAATAAG TTAAAATATC AACGTCTCAA TTACTTCTTG 67075 .......... .......... .......... .......... .......... .......... 206 AAGTCACCAA AGACTTGGAT TTTCCTTTTA GGATAATAAT ATTTTTAGTC CCTCCATTAT 67135 .......... .......... .......... .......... .......... .......... 206 TATTTGAGGT GTTTTTTTTT AAAAAAAATA ACACATGAGA TGAGTATTGA TGACACAAAA 67195 .......... .......... .......... .......... .......... .......... 206 GTATTTAATA AAAAATAATA ATGATATTAT CATTTAAAAT AAACATTGTA AAGTCATAAT 67255 .......... .......... .......... .......... .......... .......... 206 AAAAATAATC ATAATATAAA AGTACTAAAT CATGTTAAAA TAAGTTTAAT AAGTATTAGT 67315 ||| | ||| |||| |||||||||| ||| ||||| |||||||||| ||| ||||| .......ATC AGAATTTAAA AGTACTAAAT CATTCTAAAA TAAGTTTAAT AAGCATTAG- 258 TACATGACTA AATATTAAAG AAAATTAAAA TTAGACTATG TATTTCAATT GTCTAAACTA 67375 | | | || ||| |||||| ||| | |||| |||||| || ||||||| | -A-A-G---G AA-ATT---- AAAATT-AAA -T----TATG TATTTCCCTT GTCTAAATCA 301 ATGTAAAATC AAAGAACAAA TATTTAATAT TATT 67409 |||||||||| |||||||||| |||||||||| |||| ATGTAAAATC AAAGAACAAA TATTTAATAT TATT 335 hqPGS_C08HBa0165B06.1+_SGN-E219032- (67263 67409) ******************************************************************************** EST sequence 88 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 70574 to 67220): Exon 1 69928 69401 ( 528 n); cDNA 1 528 ( 528 n); score: 0.926 MATCH C08HBa0165B06.1- SGN-E207645- 0.926 528 0.957 C PGS_C08HBa0165B06.1-_SGN-E207645- (69928 69401) Alignment (genomic DNA sequence = upper lines): TGGACTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCACTAAATG 69869 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACACCT ACTCCAAAAT 69809 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCTTT CCACAAGCCC ATGTTCTGTT GCAAACCAAG AAAACTTGGA GTATGAGTAG 69749 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TATGCAAGGA GAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 69689 | ||||| || ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TGCTGCAGTT AATCTTGCTG CAAAACCTTT CATCACATTG TGGTAGGAGT 69629 |||||||||| | |||||||| |||||||||| |||| ||| | |||||||||| || || || | CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATGCT AGCAGCCTCT TCATCTCCAC TCGAGCTAAT TGCGGTAGTA GTTTTAGGCA 69569 ||||||| | |||||||||| |||| ||||| | |||||||| |||||||||| |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAAAG GTAATAGCTC TCTAAATCCG TTAATGATGA TTGAGTAGAA ATTTGGTTTT 69509 |||||||||| ||||||||| ||||||||| |||| ||||| ||||| || | ||| || ||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CAGGTGATTC AACATGGACT ATATAAGTCT CGAGATCACT CTGAATACTA GGCCTTAGGA 69449 |||| ||||| ||||||||| |||||||||| |||||| ||| ||||||| || |||| | ||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAGCAAAA TATGAAGATA AGAAGAATTT TCAAGAATCC CATTGCTG 69401 | || ||||| ||||| | | | ||| |||| |||||||||| ||| |||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTG 528 hqPGS_C08HBa0165B06.1-_SGN-E207645- (69928 69401) ******************************************************************************** EST sequence 128 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 70529 to 67320): Exon 1 69919 69402 ( 518 n); cDNA 1 518 ( 518 n); score: 0.898 MATCH C08HBa0165B06.1- SGN-E330205- 0.898 518 0.972 C PGS_C08HBa0165B06.1-_SGN-E330205- (69919 69402) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCACTAAAT GAAGGATGAT 69860 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| |||||||| | AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAAGAAT TCCAGTGTCT AGAACTCCGA TGATCACACC TACTCCAAAA TTGGAATCTT 69800 |||||| ||| |||||||||| | |||||||| ||||||| || | ||| | |||||||| | CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCACAAGCC CATGTTCTGT TGCAAACCAA GAAAACTTGG AGTATGAGTA GTATGCAAGG 69740 |||| | || ||||||||| |||||||||| |||||||||| |||||||||| || ||||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 AGAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 69680 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTGCTGCAGT TAATCTTGCT GCAAAACCTT TCATCACATT GTGGTAGGAG TAGATCATGC 69620 || ||||||| |||||||||| ||||| ||| |||||||||| ||| ||||| ||||||||| GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATCTCCA CTCGAGCTAA TTGCGGTAGT AGTTTTAGGC AAAAAAGAAA 69560 |||||||||| ||||| |||| ||||| |||| ||| ||||| |||||||||| |||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT CTCTAAATCC GTTAATGATG ATTGAGTAGA AATTTGGTTT TCAGGTGATT 69500 |||||||||| |||||||| ||||| ||| ||||||||| || | || || ||||| |||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC TATATAAGTC TCGAGATCAC TCTGAATACT AGGCCTTAGG AAAGAGCAAA 69440 |||||||||| ||||||||| ||||||| || |||||||| | ||||| | || ||||| || | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 ATATGAAGAT AAGAAGAATT TTCAAGAATC CCATTGCT 69402 | ||||| | |||| ||| ||||| |||| |||| ||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCT 518 hqPGS_C08HBa0165B06.1-_SGN-E330205- (69919 69402) ******************************************************************************** EST sequence 99 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 71199 to 67370): Exon 1 69860 69402 ( 459 n); cDNA 1 459 ( 459 n); score: 0.895 MATCH C08HBa0165B06.1- SGN-E207387- 0.895 459 0.979 C PGS_C08HBa0165B06.1-_SGN-E207387- (69860 69402) Alignment (genomic DNA sequence = upper lines): TCAGGAAGAA TTCCAGTGTC TAGAACTCCG ATGATCACAC CTACTCCAAA ATTGGAATCT 69801 ||||||| || |||||||||| || ||||||| |||||||| | || ||| | |||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCACAAGC CCATGTTCTG TTGCAAACCA AGAAAACTTG GAGTATGAGT AGTATGCAAG 69741 ||||| | | |||||||||| ||||||||| |||||||||| |||||||||| ||| ||||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GAGAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 69681 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTGCTGCAG TTAATCTTGC TGCAAAACCT TTCATCACAT TGTGGTAGGA GTAGATCATG 69621 ||| |||||| |||||||||| |||||| ||| ||||||||| |||| ||||| ||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 CTAGCAGCCT CTTCATCTCC ACTCGAGCTA ATTGCGGTAG TAGTTTTAGG CAAAAAAGAA 69561 ||||||||| |||||| ||| |||||| ||| |||| ||||| ||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TCTCTAAATC CGTTAATGAT GATTGAGTAG AAATTTGGTT TTCAGGTGAT 69501 |||||||||| | ||||||| |||||| || |||||||||| || | || | |||||| ||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CTATATAAGT CTCGAGATCA CTCTGAATAC TAGGCCTTAG GAAAGAGCAA 69441 |||||||||| | |||||||| |||||||| | ||||||||| |||||| | | |||||| || TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AATATGAAGA TAAGAAGAAT TTTCAAGAAT CCCATTGCT 69402 || ||||| | |||||| || |||||| ||| ||||| ||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCT 459 hqPGS_C08HBa0165B06.1-_SGN-E207387- (69860 69402) ******************************************************************************** EST sequence 29 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 70803 to 68815): Exon 1 70193 69415 ( 779 n); cDNA 1 779 ( 779 n); score: 0.999 MATCH C08HBa0165B06.1- SGN-E539488- 0.999 779 1.000 C PGS_C08HBa0165B06.1-_SGN-E539488- (70193 69415) Alignment (genomic DNA sequence = upper lines): ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC AACCGCCATC AGAACTACAT 70134 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 70074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 70014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 69954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 69894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 69834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 69774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 69714 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 69654 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 69594 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 69534 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 69474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 69415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1-_SGN-E539488- (70193 69415) ******************************************************************************** EST sequence 16 +strand 439 n (File: SGN-E282403+) 1 TGAAAATTCT TCTTATCTTC ATATTTTGCT CTTTCCTAAG GCCTAGTATT CAGAGTGATC 61 TCGAGACTTA TATAGTCCAT GTTGAATCAC CTGAAAACCA AATTTCTACT CAATCATCAT 121 TAACGGATTT AGAGAGCTAT TACCTTTCTT TTTTGCCTAA AACTACTACC GCAATTAGCT 181 CGAGTGGAGA TGAAGAGGCT GCTAGCATGA TCTACTCCTA CCACAATGTG ATGAAAGGTT 241 TTGCAGCAAG ATTAACTGCA GCACAAGTGA AGGAAATGGA GAAAAAACAC GGCTTTGTCT 301 CTGCTCAGAA ACAGAGGATT TTCTCCTTGC ATACTACTCA TACTCCAAGT TTTCTTGGTT 361 TGCAACAGAA CATGGGCTTG TGGAAAGATT CCAATTTTGG AGTAGGTGTG ATCATCGGAG 421 TTCTAGACAC TGGAATTCT Predicted gene structure (within gDNA segment 68816 to 70464): Exon 1 69416 69854 ( 439 n); cDNA 1 439 ( 439 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E282403+ 1.000 439 1.000 C PGS_C08HBa0165B06.1+_SGN-E282403+ (69416 69854) Alignment (genomic DNA sequence = upper lines): TGAAAATTCT TCTTATCTTC ATATTTTGCT CTTTCCTAAG GCCTAGTATT CAGAGTGATC 69475 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAATTCT TCTTATCTTC ATATTTTGCT CTTTCCTAAG GCCTAGTATT CAGAGTGATC 60 TCGAGACTTA TATAGTCCAT GTTGAATCAC CTGAAAACCA AATTTCTACT CAATCATCAT 69535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGAGACTTA TATAGTCCAT GTTGAATCAC CTGAAAACCA AATTTCTACT CAATCATCAT 120 TAACGGATTT AGAGAGCTAT TACCTTTCTT TTTTGCCTAA AACTACTACC GCAATTAGCT 69595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACGGATTT AGAGAGCTAT TACCTTTCTT TTTTGCCTAA AACTACTACC GCAATTAGCT 180 CGAGTGGAGA TGAAGAGGCT GCTAGCATGA TCTACTCCTA CCACAATGTG ATGAAAGGTT 69655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGTGGAGA TGAAGAGGCT GCTAGCATGA TCTACTCCTA CCACAATGTG ATGAAAGGTT 240 TTGCAGCAAG ATTAACTGCA GCACAAGTGA AGGAAATGGA GAAAAAACAC GGCTTTGTCT 69715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGCAAG ATTAACTGCA GCACAAGTGA AGGAAATGGA GAAAAAACAC GGCTTTGTCT 300 CTGCTCAGAA ACAGAGGATT TTCTCCTTGC ATACTACTCA TACTCCAAGT TTTCTTGGTT 69775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTCAGAA ACAGAGGATT TTCTCCTTGC ATACTACTCA TACTCCAAGT TTTCTTGGTT 360 TGCAACAGAA CATGGGCTTG TGGAAAGATT CCAATTTTGG AGTAGGTGTG ATCATCGGAG 69835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAACAGAA CATGGGCTTG TGGAAAGATT CCAATTTTGG AGTAGGTGTG ATCATCGGAG 420 TTCTAGACAC TGGAATTCT 69854 |||||||||| ||||||||| TTCTAGACAC TGGAATTCT 439 hqPGS_C08HBa0165B06.1+_SGN-E282403+ (69416 69854) ******************************************************************************** EST sequence 227 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 72692 to 70095): Exon 1 71732 71242 ( 491 n); cDNA 37 527 ( 491 n); score: 1.000 Intron 1 71241 70977 ( 265 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 70976 70705 ( 272 n); cDNA 528 799 ( 272 n); score: 1.000 PPA cDNA 31 13 MATCH C08HBa0165B06.1- SGN-E548357+ 1.000 763 0.955 C PGS_C08HBa0165B06.1-_SGN-E548357+ (71732 71242,70976 70705) Alignment (genomic DNA sequence = upper lines): AAAAAAAAAC AGCAATCCAA TATGATTAAT TGTGAATAAT TTCTGCACTT ATTTTTACAT 71673 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAAAAC AGCAATCCAA TATGATTAAT TGTGAATAAT TTCTGCACTT ATTTTTACAT 96 TTTAGATTGA AAGCATTTTA GTTTTATTCA GCAGACACTC TAACTGCAAT TGGACTTCTT 71613 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGATTGA AAGCATTTTA GTTTTATTCA GCAGACACTC TAACTGCAAT TGGACTTCTT 156 ACAGAGTGCC TATTAGAATT CCACTTCAAA AATCCCTCAA CATCACTGGT AGTTGAGATA 71553 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGAGTGCC TATTAGAATT CCACTTCAAA AATCCCTCAA CATCACTGGT AGTTGAGATA 216 TTAGTTGTCT TGGTAAATAT CACTTGATAT GTCAACTTCT GGTTCAACGT TGAGAAATTT 71493 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTTGTCT TGGTAAATAT CACTTGATAT GTCAACTTCT GGTTCAACGT TGAGAAATTT 276 AGCGCGGAGG GTTCAACTTT CACGACAACT CCTTTTGGTG AAACTATCTC CACTTTGTAA 71433 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGCGGAGG GTTCAACTTT CACGACAACT CCTTTTGGTG AAACTATCTC CACTTTGTAA 336 GATGATTTAG CATCACCAAC ATTGGTTACG GTTCTGGTAT ATGTCTGAGG AGTTGATCCA 71373 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATTTAG CATCACCAAC ATTGGTTACG GTTCTGGTAT ATGTCTGAGG AGTTGATCCA 396 AGTCTGATGG AAAATGAAGG ATAATTTAGT TGCCCTTCAG GGATACGTTT TACCTCCGAG 71313 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTGATGG AAAATGAAGG ATAATTTAGT TGCCCTTCAG GGATACGTTT TACCTCCGAG 456 CAATTCACCT TGCGTTGTAA CACTTTACCT ACCTCCCGAT TTGTGTAGTT CAAACCACAT 71253 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTCACCT TGCGTTGTAA CACTTTACCT ACCTCCCGAT TTGTGTAGTT CAAACCACAT 516 AAATAAGGAA TGTAGTCCTC GAATGGTGTA TCATAAACTA GTCCTGGATC ACTTGCTCTC 71193 |||||||||| | AAATAAGGAA T......... .......... .......... .......... .......... 527 GATGGATTAA CATGTCCTGC ACCCATTGCA AAGAGATCAG CAGAAATGAG CCTTTCGTCC 71133 .......... .......... .......... .......... .......... .......... 527 AGTATTGGAC TGTTGGCGAG GTTTACTGTG TCAGCTGTTG TCATCATTGC TGACTTAATA 71073 .......... .......... .......... .......... .......... .......... 527 GCTGCAGGAG ACCAATCAGG ATGTGCGCTC TTCAGCAGAG CTGCAACACC ACTAAGGTGA 71013 .......... .......... .......... .......... .......... .......... 527 GGGCAAGACA TTGAGGTTCC GGATACTATA TTGAATGTTG ATTTTGTGTT TTTGTTGTTA 70953 |||| |||||||||| |||||||||| .......... .......... .......... ......GTTG ATTTTGTGTT TTTGTTGTTA 551 TCCACGGAGG TAGGCCAAGC AGCAAGGACG TTAACACCAG GACCGATTAT GTCAGGTTTT 70893 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCACGGAGG TAGGCCAAGC AGCAAGGACG TTAACACCAG GACCGATTAT GTCAGGTTTT 611 AAGATGCCAG GACTTGCTAC GCTTGGTCCT CGTGAGGAAA ATGAAGCAAC TATAGGAGCA 70833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATGCCAG GACTTGCTAC GCTTGGTCCT CGTGAGGAAA ATGAAGCAAC TATAGGAGCA 671 TTTTTGTCTC CAATTACAGT TCCATGGAAG GTGATTGAAG CAACCGGATT TGAAGATGAG 70773 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTGTCTC CAATTACAGT TCCATGGAAG GTGATTGAAG CAACCGGATT TGAAGATGAG 731 TTCATATAGG CAAGAATTTT CTTTCCATCA GCATTTGAAA CATCCAATGC AGGAAGGACA 70713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATATAGG CAAGAATTTT CTTTCCATCA GCATTTGAAA CATCCAATGC AGGAAGGACA 791 TGAGCTTC 70705 |||||||| TGAGCTTC 799 hqPGS_C08HBa0165B06.1-_SGN-E548357+ (71732 71242,70976 70705) ******************************************************************************** EST sequence 61 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 71358 to 68415): Exon 1 70513 70048 ( 466 n); cDNA 2 464 ( 463 n); score: 0.839 MATCH C08HBa0165B06.1- SGN-E202140- 0.839 466 1.002 C PGS_C08HBa0165B06.1-_SGN-E202140- (70513 70048) Alignment (genomic DNA sequence = upper lines): CATTCTTTCC AGCATCATAT AGAGGGAAGA ATGTTGAGTT GGAAGTCTTT GGATGATAAG 70454 |||| ||| | ||||||| || |||| ||||| |||||||||| |||| ||||| ||| |||||| CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGAGTT GGAAATCTTT GGACGATAAG 61 CAGATTCTCC TTCAAATTCC TCGCTATTTC CAAGCTTAAC AGTAACCTTC AGTTTTCTAT 70394 |||||||||| |||||||||| || | ||||| | |||||| | |||| | || | ||||||| CAGATTCTCC TTCAAATTCC TCTCCATTTC CGAGCTTAGC AGTAGCTTTT ATCTTTCTAT 121 CATGAGTACT GGCACCAACA GTGAGAATCC ACGGGGCTTC ATTAGCTACA GTGCCAAGCG 70334 || | || || |||||| || || ||||||| | |||||| ||| |||| | | || ||| CAAGCGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGA GTTATCTACT GAGGCAGGCG 181 ACGGACCGCT ATTGCCTGCT GAGGCACTTA CAAAAATACC TCTTTCTGTT GCACTGTACG 70274 | ||||| | |||||||||| ||| ||| | ||| ||| || ||||| |||| |||||||||| AAGGACCATT ATTGCCTGCT GAGCAACTAA CAAGAATGCC TCTTTGTGTT GCACTGTACG 241 TCCCGAGAGC AATACCATCA TCATGGAAAG GTTTTGTACT TCCACCAAGG GAGATTGAAA 70214 ||||||||| ||||| ||| |||| | || || | | |||||||| | || || |||| CCCCGAGAGC AATACTTTCA TCATAAAGAG GTCTCAGAGA TCCACCAATG GATATAGAAA 301 GAATATCTAC ACCATCATCT ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC 70154 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAATATCA CTGTCAGAAC 361 AACCGCCATC AGAACTACAT ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA 70094 || ||| | ||| |||| |||||||||| ||||| || ||| ||||| |||||||||| AA---CCAAC AGAGTTACAC ACCTTATATA TGGCTATATG GGCAAGAGGA GCAACACCAA 418 CAGCAGTACC ATTAGCATTC CCAAATATAT TAGCACCTTT CACAAA 70048 | ||||| || ||||||||| || ||| || |||||||||| |||||| CTGCAGTTCC ATTAGCATTT TCATATACAT TAGCACCTTT CACAAA 464 hqPGS_C08HBa0165B06.1-_SGN-E202140- (70513 70048) ******************************************************************************** EST sequence 38 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 71549 to 69569): Exon 1 70939 70169 ( 771 n); cDNA 1 771 ( 771 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E540271- 1.000 771 1.000 C PGS_C08HBa0165B06.1-_SGN-E540271- (70939 70169) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 70880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 70820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 70760 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 70700 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 70640 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 70580 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 70520 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 70460 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 70400 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 70340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 70280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 70220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 720 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 70169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A 771 hqPGS_C08HBa0165B06.1-_SGN-E540271- (70939 70169) ******************************************************************************** EST sequence 59 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 71357 to 69444): Exon 1 70747 70170 ( 578 n); cDNA 1 578 ( 578 n); score: 0.993 MATCH C08HBa0165B06.1- SGN-E286017- 0.993 578 1.000 C PGS_C08HBa0165B06.1-_SGN-E286017- (70747 70170) Alignment (genomic DNA sequence = upper lines): CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGCTGAT TTAGTCACAC 70688 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 60 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 70628 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 120 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 70568 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 180 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 70508 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 240 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 70448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 300 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 70388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 360 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 70328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 420 CGCTATTGCC TGCTGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 70268 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 480 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 70208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 540 CTACACCATC ATCTATAGCT GCATCCATGG CAGCTAAA 70170 |||||||||| |||||||||| |||| |||| |||||||| CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA 578 hqPGS_C08HBa0165B06.1-_SGN-E286017- (70747 70170) ******************************************************************************** EST sequence 22 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 72093 to 65254): Exon 1 71006 70387 ( 620 n); cDNA 1 617 ( 617 n); score: 0.794 MATCH C08HBa0165B06.1- SGN-E306389- 0.794 620 1.005 C PGS_C08HBa0165B06.1-_SGN-E306389- (71006 70387) Alignment (genomic DNA sequence = upper lines): GACATTGAGG TTCCGGATAC TATATTGAAT GTTGATTTTG TGTTTTTGTT GTTATCCACG 70947 ||||| |||| | | |||| ||||||||| || ||||| | | |||||||| || ||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAGGTAGGCC AAGCAGCAAG GACGTTAACA CCAGGACCGA TTATGTCAGG TTTTAAGATG 70887 |||||||||| |||||||||| || |||||| |||||||||| |||||||||| ||| |||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAGGACTTG CTACGCTTGG TCCTCGTGAG GAAAATGAAG CAACTATAGG AGCATTTTTG 70827 |||||||| | | |||| ||| || || |||||||||| ||||||| || ||| |||| CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA CAGTTCCATG GAAGGTGATT GAAGCAACCG GATTTGAAGA TGAGTTCATA 70767 |||||||||| ||||| || ||| |||||| ||| | | ||||| |||||| || TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAGGCAAGAA TTTTCTTTCC ATCAGCATTT GAAACATCCA ATGCAGGAAG GACATGAGCT 70707 || | ||||| || | |||| ||| ||| | ||||| |||| | || ||||| |||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCAGCTGATT TAGTCACACC CTCTTCTTGT TCATTGATGA GAATCATGCC AACACCTCCA 70647 |||||||||| | || ||||| |||||| | |||||| |||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTTA CGGATTGTCC TTGAGCAACT CTGAGAAGAC TTATACTTCG CAAACACAAG 70587 |||||||| | | | |||||| || ||||| | |||| || | || | | |||| | | GCATCCTTCA CAGCTTGTCC TTTTACAACT -TTAGAA-AC -GACACCTGG ATAACATATG 417 ACTATCTTAC CTTTGATAGC AGGGTCATTA AGTGAGCCTG GACTACAAAA AGGCGCGCTA 70527 |||||||| | |||| || || ||||||| | ||||| |||| | | || | ||| | || ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 AATTGATCAC TTTCATTCTT TCCAGCATCA TATAGAGGGA AGAATGTTGA GTTGGAAGTC 70467 || |||||| || | || | ||||||| || |||| || ||||| |||| || |||| || GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TTTGGATGAT AAGCAGATTC TCCTTCAAAT TCCTCGCTAT TTCCAAGCTT AACAGTAACC 70407 | |||| ||| ||| || ||| ||||||||| ||||| ||| ||||||| | ||||||||| TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTCAGTTTTC TATCATGAGT 70387 || | |||| ||||| ||| TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1-_SGN-E306389- (71006 70387) ******************************************************************************** EST sequence 111 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 73033 to 65707): Exon 1 71100 70438 ( 663 n); cDNA 1 663 ( 663 n); score: 0.822 MATCH C08HBa0165B06.1- SGN-E397025- 0.822 663 1.000 C PGS_C08HBa0165B06.1-_SGN-E397025- (71100 70438) Alignment (genomic DNA sequence = upper lines): AGCTGTTGTC ATCATTGCTG ACTTAATAGC TGCAGGAGAC CAATCAGGAT GTGCGCTCTT 71041 ||| |||||| |||||||| | | |||||| | ||||||||| |||||||||| ||| || || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCT GCAACACCAC TAAGGTGAGG GCAAGACATT GAGGTTCCGG ATACTATATT 70981 |||||||||| || || |||| |||||||||| |||||||||| ||||| || | ||| ||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTTGAT TTTGTGTTTT TGTTGTTATC CACGGAGGTA GGCCAAGCAG CAAGGACGTT 70921 |||||| ||| || ||||| | |||||| ||| |||||||||| |||||||||| |||||| || GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCGATTATGT CAGGTTTTAA GATGCCAGGA CTTGCTACGC TTGGTCCTCG 70861 | |||||||| |||||||||| |||| || || ||| |||||| || ||| | ||||||||| AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 TGAGGAAAAT GAAGCAACTA TAGGAGCATT TTTGTCTCCA ATTACAGTTC CATGGAAGGT 70801 |||||||||| | |||||| | |||||||||| |||||||||| |||| |||| | ||||| | TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGAAGCA ACCGGATTTG AAGATGAGTT CATATAGGCA AGAATTTTCT TTCCATCAGC 70741 |||| |||| || || ||| | | |||||| ||| || ||| |||||||| |||| || || AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 ATTTGAAACA TCCAATGCAG GAAGGACATG AGCTTCAGCT GATTTAGTCA CACCCTCTTC 70681 | ||||||| ||||||| | |||| ||||| ||| |||||| |||||||| | |||| | || AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 TTGTTCATTG ATGAGAATCA TGCCAACACC TCCAGCATCC TTTACGGATT GTCCTTGAGC 70621 | | ||| |||| ||||| |||||||||| |||||||||| || || | || |||||| | | TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 480 AACTCTGAGA AGACTTATAC TTCGCAAACA CAAGACTATC TTACCTTTGA TAGCAGGGTC 70561 ||| || | | | |||| || |||||| || ||| | | |||||||||| AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 540 ATTAAGTGAG CCTGGACTAC AAAAAGGCGC GCTAAATTGA TCACTTTCAT TCTTTCCAGC 70501 | | ||||| ||| | || | || |||| | || || || || ||| | ||| |||| AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 600 ATCATATAGA GGGAAGAATG TTGAGTTGGA AGTCTTTGGA TGATAAGCAG ATTCTCCTTC 70441 |||| ||||| | |||||||| ||| |||||| | |||||||| ||||||||| |||||||||| ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 660 AAA 70438 ||| AAA 663 hqPGS_C08HBa0165B06.1-_SGN-E397025- (71100 70438) ******************************************************************************** EST sequence 73 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 72669 to 66994): Exon 1 71168 70561 ( 608 n); cDNA 1 605 ( 605 n); score: 0.821 MATCH C08HBa0165B06.1- SGN-E308535- 0.821 608 1.005 C PGS_C08HBa0165B06.1-_SGN-E308535- (71168 70561) Alignment (genomic DNA sequence = upper lines): ATTGCAAAGA GATCAGCAGA AATGAGCCTT TCGTCCAGTA TTGGACTGTT GGCGAGGTTT 71109 |||||||||| || |||| || | | || || || |||| ||||||| | ||| |||||| ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 60 ACTGTGTCAG CTGTTGTCAT CATTGCTGAC TTAATAGCTG CAGGAGACCA ATCAGGATGT 71049 | |||| || | |||||||| ||||| ||| |||||||| | |||||||||| |||||||||| AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 120 GCGCTCTTCA GCAGAGCTGC AACACCACTA AGGTGAGGGC AAGACATTGA GGTTCCGGAT 70989 | |||||||| |||||||||| || |||||| |||||||||| ||||||| || ||| || ||| GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 180 ACTATATTGA ATGTTGATTT TGTGTTTTTG TTGTTATCCA CGGAGGTAGG CCAAGCAGCA 70929 | ||||||| |||| ||||| || |||||| |||| ||||| |||||||||| |||||||||| ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 240 AGGACGTTAA CACCAGGACC GATTATGTCA GGTTTTAAGA TGCCAGGACT TGCTACGCTT 70869 |||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| | | || AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 300 GGTCCTCGTG AGGAAAATGA AGCAACTATA GGAGCATTTT TGTCTCCAAT TACAGTTCCA 70809 ||||| || | | |||||||| ||||||||| ||||| |||| |||||||| || ||||| GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 360 TGGAAGGTGA TTGAAGCAAC CGGATTTGAA GATGAGTTCA TATAGGCAAG AATTTTCTTT 70749 ||||| |||| || ||| || ||||| |||||| |||| | ||| |||| | || TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 420 CCATCAGCAT TTGAAACATC CAATGCAGGA AGGACATGAG CTTCAGCTGA TTTAGTCACA 70689 ||||| ||| |||||| || ||| || ||| || ||||||| | |||||||| ||| || ||| CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 480 CCCTCTTCTT GTTCATTGAT GAGAATCATG CCAACACCTC CAGCATCCTT TACGGATTGT 70629 || |||||| | ||||| | |||||| |||||||||| |||||||||| || | |||| CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 540 CCTTGAGCAA CTCTGAGAAG ACTTATACTT CGCAAACACA AGACTATCTT ACCTTTGATA 70569 |||| ||| | || |||| || | || | | |||| | ||||||||| ||||| || CCTTTTACAA C-CTTAGAA- AC-GACACCT GGATAACATA TGACTATCTT TCCTTTTATT 597 GCAGGGTC 70561 |||||||| GCAGGGTC 605 hqPGS_C08HBa0165B06.1-_SGN-E308535- (71168 70561) ******************************************************************************** EST sequence 31 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 71955 to 65929): Exon 1 71282 70579 ( 704 n); cDNA 1 704 ( 704 n); score: 0.832 MATCH C08HBa0165B06.1- SGN-E212584- 0.832 704 1.000 C PGS_C08HBa0165B06.1-_SGN-E212584- (71282 70579) Alignment (genomic DNA sequence = upper lines): ACCTCCCGAT TTGTGTAGTT CAAACCACAT AAATAAGGAA TGTAGTCCTC GAATGGTGTA 71223 |||| ||| |||||||||| |||||||||| |||||||| | || ||||| ||||| ||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ACTTGCTCTC GATGGATTAA CATGTCCTGC ACCCATTGCA 71163 |||||||||| |||||||||| | |||| ||| |||||||||| |||||||||| ||| |||||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 AAGAGATCAG CAGAAATGAG CCTTTCGTCC AGTATTGGAC TGTTGGCGAG GTTTACTGTG 71103 ||| ||||| ||| | ||| ||||| ||| |||||||||| | |||| || ||||| |||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCTGTTG TCATCATTGC TGACTTAATA GCTGCAGGAG ACCAATCAGG ATGTGCGCTC 71043 ||||| |||| |||||||||| ||||||||| | ||||||| |||||||||| ||||| ||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CTGCAACACC ACTAAGGTGA GGGCAAGACA TTGAGGTTCC GGATACTATA 70983 |||||||||| |||| || || ||||||||| |||||||||| | ||||| || |||| ||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTTG ATTTTGTGTT TTTGTTGTTA TCCACGGAGG TAGGCCAAGC AGCAAGGACG 70923 |||||||| | |||| |||| ||||||| | ||||| || | |||||||||| ||| |||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCGATTAT GTCAGGTTTT AAGATGCCAG GACTTGCTAC GCTTGGTCCT 70863 |||||||||| |||| ||||| ||||||||| ||||| |||| || | | | |||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CGTGAGGAAA ATGAAGCAAC TATAGGAGCA TTTTTGTCTC CAATTACAGT TCCATGGAAG 70803 || || |||| ||| |||||| ||| |||||| ||||| |||| ||||||| || ||| |||| CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GTGATTGAAG CAACCGGATT TGAAGATGAG TTCATATAGG CAAGAATTTT CTTTCCATCA 70743 ||||||| || |||| || || || |||| || |||||| || ||||||| ||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCATTTGAAA CATCCAATGC AGGAAGGACA TGAGCTTCAG CTGATTTAGT CACACCCTCT 70683 ||| ||||| || ||||||| ||||| ||| ||||| |||| |||||||||| ||||| | | GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 TCTTGTTCAT TGATGAGAAT CATGCCAACA CCTCCAGCAT CCTTTACGGA TTGTCCTTGA 70623 | | | | |||||| ||| |||||||||| |||||||||| |||| || | |||||||| | TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 660 GCAACTCTGA GAAGACTTAT ACTTCGCAAA CACAAGACTA TCTT 70579 |||| || | || | ||| || || |||| |||| TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT 704 hqPGS_C08HBa0165B06.1-_SGN-E212584- (71282 70579) ******************************************************************************** EST sequence 49 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 71864 to 70063): Exon 1 71254 70663 ( 592 n); cDNA 1 592 ( 592 n); score: 0.995 MATCH C08HBa0165B06.1- SGN-E329031- 0.995 592 1.000 C PGS_C08HBa0165B06.1-_SGN-E329031- (71254 70663) Alignment (genomic DNA sequence = upper lines): ATAAATAAGG AATGTAGTCC TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTTGCTC 71195 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 60 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 71135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 120 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 71075 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 180 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 71015 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 240 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 70955 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 300 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 70895 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 360 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 70835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 420 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 70775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 480 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 70715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 540 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 70663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 592 hqPGS_C08HBa0165B06.1-_SGN-E329031- (71254 70663) ******************************************************************************** EST sequence 36 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 73195 to 67129): Exon 1 71402 70699 ( 704 n); cDNA 2 708 ( 707 n); score: 0.850 MATCH C08HBa0165B06.1- SGN-E213673- 0.850 704 0.994 C PGS_C08HBa0165B06.1-_SGN-E213673- (71402 70699) Alignment (genomic DNA sequence = upper lines): GTTCTGGTAT ATGTCTGAGG AGTTGATCCA AGTCT-GAT- GGAAAATG-A AGGATAATTT 71346 |||||||| | |||||||||| |||||||||| ||||| ||| | ||||| | |||||| ||| GTTCTGGTGT ATGTCTGAGG AGTTGATCCA AGTCTCGATA TGCAAATGAA AGGATAGTTT 61 AGTTGCCCTT CAGGGATACG TTTTACCTCC GAGCAATTCA CCTTGCGTTG TAACACTTTA 71286 | ||| ||| ||||||||| || |||||| |||||||||| || ||||| | ||||| |||| AATTGTGCTT CAGGGATACT TTCAACCTCC GAGCAATTCA CCCTGCGTCG TAACAATTTA 121 CCTACCTCCC GATTTGTGTA GTTCAAACCA CATAAATAAG GAATGTAGTC CTCGAATGGT 71226 ||||||| |||||||||| |||||||||| |||||||||| | | || || ||| ||||| CCTACCTGTG GATTTGTGTA GTTCAAACCA CATAAATAAG GTACATAATC CTCAAATGGG 181 GTATCATAAA CTAGTCCTGG ATCACTTGCT CTCGATGGAT TAACATGTCC TGCACCCATT 71166 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||| ||| GTATCATAAA CTAGTCCTGG ATCATTTGCC CTCGATGGAT TAACATGTCC TGCACCTATT 241 GCAAAGAGAT CAGCAGAAAT GAGCCTTTCG TCCAGTATTG GACTGTTGGC GAGGTTTACT 71106 ||| ||| || |||||| | |||||||| | || ||||||| |||| |||| ||||||| | GCATAGATAT CAGCAGGACG GAGCCTTTGG TCGAGTATTG GACTACTGGC AAGGTTTAAT 301 GTGTCAGCTG TTGTCATCAT TGCTGACTTA ATAGCTGCAG GAGACCAATC AGGATGTGCG 71046 |||||||| | |||||||||| ||| |||||| ||| | |||| |||||||||| |||||||| GTGTCAGCGG TTGTCATCAT TGCAGACTTA ATAACAGCAG GAGACCAATC AGGATGTGTT 361 CTCTTCAGCA GAGCTGCAAC ACCACTAAGG TGAGGGCAAG ACATTGAGGT TCCGGATACT 70986 |||||||||| ||||||| || ||||||||| || ||||||| |||| ||||| || |||| CTCTTCAGCA GAGCTGCTAC CCCACTAAGG TGTGGGCAAG ACATCGAGGT GCCTGATATA 421 ATATTGAATG TTGATTTTGT GTTTTTGTTG TTATCCACGG AGGTAGGCCA AGCAGCAAGG 70926 |||||||||| | ||||| || || |||||| | |||||| | | |||||||| |||||| ||| ATATTGAATG TGGATTTGGT GTCCTTGTTG TCATCCACAG AAGTAGGCCA AGCAGCGAGG 481 ACGTTAACAC CAGGACCGAT TATGTCAGGT TTTAAGATGC CAGGACTTGC TACGCTTGGT 70866 | ||||||| ||||||| || |||||||||| || ||||| | ||||| | | | |||||| ATATTAACAC CAGGACCAAT TATGTCAGGT TTCAAGATCC CAGGATTAGG TTTACTTGGT 541 CCTCGTGAGG AAAATGAAGC AACTATAGGA GCATTTTTGT CTCCAATTAC AGTTCCATGG 70806 || || || | |||||| ||| |||||| ||| |||||||| | |||||||||| ||||| ||| CCGCGAGAAG AAAATGCAGC AACTATTGGA GCATTTTTAT CTCCAATTAC TGTTCCTTGG 601 AAGGTGATTG AAGCAACCGG ATTTGAAGAT GAGTTCATAT AGGCAAGAAT TTTCTTTCCA 70746 | ||||||| |||||| || || || | ||||| ||| ||||| |||| ||| ||||| ATTGTGATTG TAGCAACAGG GTTCGATATT GAGTTTGTAT AGGCACGAAT TTTGCTTCCA 661 TCAGCATTTG AAACATCCAA TGCAGGAAGG ACATGAGCTT CAGCTGA 70699 || ||| || ||||| |||| ||| ||||| |||||||| | ||||||| TCTGCAGCTG AAACAACCAA TGCTGGAAGA ACATGAGCAT CAGCTGA 708 hqPGS_C08HBa0165B06.1-_SGN-E213673- (71402 70699) ******************************************************************************** EST sequence 26 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 72995 to 67669): Exon 1 71383 70753 ( 631 n); cDNA 1 634 ( 634 n); score: 0.850 MATCH C08HBa0165B06.1- SGN-E213088- 0.850 631 0.995 C PGS_C08HBa0165B06.1-_SGN-E213088- (71383 70753) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGTCT-G-- ATGGAAAATG AAGGATAATT TAGTTGCCCT TCAGGGATAC 71327 |||||||||| |||||| | ||| |||||| ||||||| || || ||| || |||||||||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 GTTTTACCTC CGAGCAATTC ACCTTGCGTT GTAACACTTT ACCTACCTCC CGATTTGTGT 71267 || ||||| |||||||||| ||| ||||| |||||| ||| |||||||| ||||||||| TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTCAAACC ACATAAATAA GGAATGTAGT CCTCGAATGG TGTATCATAA ACTAGTCCTG 71207 |||||||||| |||||||||| || | || | |||| ||||| ||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCACTTGC TCTCGATGGA TTAACATGTC CTGCACCCAT TGCAAAGAGA TCAGCAGAAA 71147 ||||| |||| ||||||||| |||||||||| ||||||| || |||| ||| | ||||||| | GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 TGAGCCTTTC GTCCAGTATT GGACTGTTGG CGAGGTTTAC TGTGTCAGCT GTTGTCATCA 71087 |||||||| ||| |||||| ||||| ||| | ||||||| ||||||||| |||||||||| GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCTGACTT AATAGCTGCA GGAGACCAAT CAGGATGTGC GCTCTTCAGC AGAGCTGCAA 71027 |||| ||||| |||| | ||| |||||||||| ||||||||| ||||||||| |||||||| | TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CACCACTAAG GTGAGGGCAA GACATTGAGG TTCCGGATAC TATATTGAAT GTTGATTTTG 70967 | |||||||| ||| |||||| ||||| |||| | || |||| ||||||||| || ||||| | CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTTTTTGTT GTTATCCACG GAGGTAGGCC AAGCAGCAAG GACGTTAACA CCAGGACCGA 70907 ||| ||||| || |||||| || ||||||| ||||||| || || |||||| |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTTAAGATG CCAGGACTTG CTACGCTTGG TCCTCGTGAG GAAAATGAAG 70847 |||||||||| ||| ||||| |||||| | | | ||||| ||| || || ||||||| || TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CAACTATAGG AGCATTTTTG TCTCCAATTA CAGTTCCATG GAAGGTGATT GAAGCAACCG 70787 ||||||| || ||||||||| |||||||||| | ||||| || || |||||| | |||||| | CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GATTTGAAGA TGAGTTCATA TAGGCAAGAA TTTT 70753 | || || |||||| || |||||| ||| |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1-_SGN-E213088- (71383 70753) ******************************************************************************** EST sequence 130 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 71841 to 70223): Exon 1 71231 70823 ( 409 n); cDNA 1 409 ( 409 n); score: 0.963 MATCH C08HBa0165B06.1- SGN-E317658- 0.963 409 1.000 C PGS_C08HBa0165B06.1-_SGN-E317658- (71231 70823) Alignment (genomic DNA sequence = upper lines): AATGGTGTAT CATAAACTAG TCCTGGATCA CTTGCTCTCG ATGGATTAAC ATGTCCTGCA 71172 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCCATTGCAA AGAGATCAGC AGAAATGAGC CTTTCGTCCA GTATTGGACT GTTGGCGAGG 71112 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| || || |||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTACTGTGT CAGCTGTTGT CATCATTGCT GACTTAATAG CTGCAGGAGA CCAATCAGGA 71052 |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGCGCTCT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAAGACAT TGAGGTTCCG 70992 |||||||| | |||||||||| |||||||||| |||||||||| ||||| |||| |||||||| | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 70932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACTTGCTACG 70872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCTC GTGAGGAAAA TGAAGCAACT ATAGGAGCAT TTTTGTCTC 70823 |||||||||| | ||| ||| ||||||| || |||||||||| ||||||||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1-_SGN-E317658- (71231 70823) ******************************************************************************** EST sequence 97 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 73933 to 69300): Exon 1 71612 71043 ( 570 n); cDNA 2 574 ( 573 n); score: 0.854 MATCH C08HBa0165B06.1- SGN-E207413- 0.854 570 0.993 C PGS_C08HBa0165B06.1-_SGN-E207413- (71612 71043) Alignment (genomic DNA sequence = upper lines): ACAGAGTGCC TATTAGAATT CCACTTCAAA AATCCCTCAA CATCACTGGT AGTTGAGATA 71553 |||||||||| | |||||||| ||||||||| |||||||||| || | | | ||||| | ACAGAGTGCC TGTTAGAATT CCACTTCAAG AATCCCTCAA CAACCCCAGA CATTGAGCTG 61 TTAGTTGTCT TGGTAAATAT CACTTGATAT GTCAACTTCT GGTTCAACGT TGAGAAATTT 71493 ||| |||||| ||| |||| | |||||| ||| || | ||||| |||||||| ||||||||| TTAATTGTCT TGGAAAATGT CACTTGGTAT GTTAGCTTCT GGTTCAACTC CGAGAAATTT 121 AGCGCGGAGG GTTCAACTTT CACGACAACT CCTTTTGGTG AAACTATCTC CACTTTGTAA 71433 ||| | || | | |||||| ||||||||| ||||| |||| || |||||| ||| ||||| AGCTTGCTGG GCTTAACTTT CACGACAACG CCTTTAGGTG AAGCTATCTG CACCGTGTAA 181 GATGATTTAG CATCACCAAC ATTGGTTACG GTTCTGGTAT ATGTCTGAGG AGTTGATCCA 71373 |||||||| | |||||||||| |||||| || |||||||| | |||||||||| |||||||||| GATGATTTGG CATCACCAAC ATTGGTCACA GTTCTGGTGT ATGTCTGAGG AGTTGATCCA 241 AGTCT-G--A TGGAAAATGA AGGATAATTT AGTTGCCCTT CAGGGATACG TTTTACCTCC 71316 ||||| | | || ||||||| |||||| ||| | ||| ||| ||||||||| || |||||| AGTCTCGATA TGCAAAATGA AGGATAGTTT AATTGTGCTT CAGGGATACT TTCAACCTCC 301 GAGCAATTCA CCTTGCGTTG TAACACTTTA CCTACCTCCC GATTTGTGTA GTTCAAACCA 71256 |||||||||| || ||||| | ||||| |||| ||||||| |||||||||| |||||||||| GAGCAATTCA CCCTGCGTCG TAACAATTTA CCTACCTGTG GATTTGTGTA GTTCAAACCA 361 CATAAATAAG GAATGTAGTC CTCGAATGGT GTATCATAAA CTAGTCCTGG ATCACTTGCT 71196 |||||||||| | | || || ||| ||||| |||||||||| |||||||||| |||| |||| CATAAATAAG GTACATAATC CTCAAATGGG GTATCATAAA CTAGTCCTGG ATCATTTGCC 421 CTCGATGGAT TAACATGTCC TGCACCCATT GCAAAGAGAT CAGCAGAAAT GAGCCTTTCG 71136 |||||||||| |||||||||| |||||| ||| ||| ||| || |||||| | |||||||| | CTCGATGGAT TAACATGTCC TGCACCTATT GCATAGATAT CAGCAGGACG GAGCCTTTGG 481 TCCAGTATTG GACTGTTGGC GAGGTTTACT GTGTCAGCTG TTGTCATCAT TGCTGACTTA 71076 || ||||||| |||| |||| ||||||| | |||||||| | |||||||||| ||| |||||| TCGAGTATTG GACTACTGGC AAGGTTTAAT GTGTCAGCGG TTGTCATCAT TGCAGACTTA 541 ATAGCTGCAG GAGACCAATC AGGATGTGCG CTC 71043 ||| | |||| |||||||||| |||||||| ||| ATAACAGCAG GAGACCAATC AGGATGTGTT CTC 574 hqPGS_C08HBa0165B06.1-_SGN-E207413- (71612 71043) ******************************************************************************** EST sequence 356 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 74560 to 69060): Exon 1 71509 71073 ( 437 n); cDNA 1 440 ( 440 n); score: 0.859 MATCH C08HBa0165B06.1- SGN-E287935+ 0.859 437 0.886 C PGS_C08HBa0165B06.1-_SGN-E287935+ (71509 71073) Alignment (genomic DNA sequence = upper lines): TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC GACAACTCCT TTTGGTGAAA 71450 ||||| || |||||||||| ||||||||| |||||| | | |||| ||| | ||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT GGTTACGGTT CTGGTATATG 71390 ||| |||||| |||||||||| ||| |||||| |||||||||| |||||| ||| |||||||||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGT -CTGA--TGG AAAATGAAGG ATAATTTAGT TGCCCTTCAG 71333 |||||||||| |||||||||| | | ||| |||| ||||| ||| |||| | || ||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GGATACGTTT TACCTCCGAG CAATTCACCT TGCGTTGTAA CACTTTACCT ACCTCCCGAT 71273 |||||| ||| ||||||||| ||||||||| ||||||||| || |||||| |||| ||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TTGTGTAGTT CAAACCACAT AAATAAGGAA TGTAGTCCTC GAATGGTGTA TCATAAACTA 71213 |||||| || |||||||||| |||||||| | |||||||| |||||||||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ACTTGCTCTC GATGGATTAA CATGTCCTGC ACCCATTGCA AAGAGATCAG 71153 |||||||||| | |||| || |||||||||| |||||||||| ||| |||||| ||| |||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGAAATGAG CCTTTCGTCC AGTATTGGAC TGTTGGCGAG GTTTACTGTG TCAGCTGTTG 71093 ||| || ||| |||||| || |||||||||| | || || || ||||| ||| ||||| |||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATCATTGC TGACTTAATA 71073 |||||||||| ||||||||| TCATCATTGC AGACTTAATA 440 hqPGS_C08HBa0165B06.1-_SGN-E287935+ (71509 71073) ******************************************************************************** EST sequence 418 +strand 450 n (File: SGN-E237320+) 1 TTTTTTTTTT TTTTTTTGAC ATAAAACATA TACTGGAAAA AAAAAACAGC AATCCAATAT 61 GATTAATTGT GAATAATTTC TGCACTTATT TTTACATTTT AGATTGAAAG CATTTTAGTT 121 TTATTCAGCA GACACTCTAA CTGCAATTGG ACTTCTTACA GAGTGCCTAT TAGAATTCCA 181 CTTCAAAAAT CCCTCAACAT CACTGGTAGT TGAGATATTA GTTGTCTTGG TAAATATCAC 241 TTGATATGTC AACTTCTGGT TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC 301 GACAACTCCT TTTGGTGAAA CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT 361 GGTTACGGTT CTGGTATATG TCTGAGGAGT TGATCCAAGT CTGATGGAAA ATGAAGGATA 421 ATTTAGTTGC CCTTAGGGAT ACGTTTTACC Predicted gene structure (within gDNA segment 72513 to 70709): Exon 1 71753 71319 ( 435 n); cDNA 17 450 ( 434 n); score: 0.998 PPA cDNA 16 1 MATCH C08HBa0165B06.1- SGN-E237320+ 0.998 435 0.967 C PGS_C08HBa0165B06.1-_SGN-E237320+ (71753 71319) Alignment (genomic DNA sequence = upper lines): TGACATAAAA CATATACTGG AAAAAAAAAA CAGCAATCCA ATATGATTAA TTGTGAATAA 71694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATAAAA CATATACTGG AAAAAAAAAA CAGCAATCCA ATATGATTAA TTGTGAATAA 76 TTTCTGCACT TATTTTTACA TTTTAGATTG AAAGCATTTT AGTTTTATTC AGCAGACACT 71634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTGCACT TATTTTTACA TTTTAGATTG AAAGCATTTT AGTTTTATTC AGCAGACACT 136 CTAACTGCAA TTGGACTTCT TACAGAGTGC CTATTAGAAT TCCACTTCAA AAATCCCTCA 71574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAACTGCAA TTGGACTTCT TACAGAGTGC CTATTAGAAT TCCACTTCAA AAATCCCTCA 196 ACATCACTGG TAGTTGAGAT ATTAGTTGTC TTGGTAAATA TCACTTGATA TGTCAACTTC 71514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCACTGG TAGTTGAGAT ATTAGTTGTC TTGGTAAATA TCACTTGATA TGTCAACTTC 256 TGGTTCAACG TTGAGAAATT TAGCGCGGAG GGTTCAACTT TCACGACAAC TCCTTTTGGT 71454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTCAACG TTGAGAAATT TAGCGCGGAG GGTTCAACTT TCACGACAAC TCCTTTTGGT 316 GAAACTATCT CCACTTTGTA AGATGATTTA GCATCACCAA CATTGGTTAC GGTTCTGGTA 71394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACTATCT CCACTTTGTA AGATGATTTA GCATCACCAA CATTGGTTAC GGTTCTGGTA 376 TATGTCTGAG GAGTTGATCC AAGTCTGATG GAAAATGAAG GATAATTTAG TTGCCCTTCA 71334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TATGTCTGAG GAGTTGATCC AAGTCTGATG GAAAATGAAG GATAATTTAG TTGCCCTT-A 435 GGGATACGTT TTACC 71319 |||||||||| ||||| GGGATACGTT TTACC 450 hqPGS_C08HBa0165B06.1-_SGN-E237320+ (71753 71319) ******************************************************************************** EST sequence 420 +strand 360 n (File: SGN-E237418+) 1 TTTTTTTTTT TTTTTTTGAC ATAAAACATA TACTGGAAAA AAAAAACAGC AATCCAATAT 61 GATTAATTGT GAATAATTTC TGCACTTATT TTTACATTTT AGATTGAAAG CATTTTAGTT 121 TTATTCAGCA GACACTCTAA CTGCAATTGG ACTTCTTACA GAGTGCCTAT TAGAATTCCA 181 CTTCAAAAAT CCCTCAACAT CACTGGTAGT TGAGATATTA GTTGTCTTGG TAAATATCAC 241 TTGATATGTC AACTTCTGGT TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC 301 GACAACTCCT TTTGGTGAAA CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT Predicted gene structure (within gDNA segment 72513 to 70800): Exon 1 71753 71410 ( 344 n); cDNA 17 360 ( 344 n); score: 1.000 PPA cDNA 16 1 MATCH C08HBa0165B06.1- SGN-E237418+ 1.000 344 0.956 C PGS_C08HBa0165B06.1-_SGN-E237418+ (71753 71410) Alignment (genomic DNA sequence = upper lines): TGACATAAAA CATATACTGG AAAAAAAAAA CAGCAATCCA ATATGATTAA TTGTGAATAA 71694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATAAAA CATATACTGG AAAAAAAAAA CAGCAATCCA ATATGATTAA TTGTGAATAA 76 TTTCTGCACT TATTTTTACA TTTTAGATTG AAAGCATTTT AGTTTTATTC AGCAGACACT 71634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTGCACT TATTTTTACA TTTTAGATTG AAAGCATTTT AGTTTTATTC AGCAGACACT 136 CTAACTGCAA TTGGACTTCT TACAGAGTGC CTATTAGAAT TCCACTTCAA AAATCCCTCA 71574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAACTGCAA TTGGACTTCT TACAGAGTGC CTATTAGAAT TCCACTTCAA AAATCCCTCA 196 ACATCACTGG TAGTTGAGAT ATTAGTTGTC TTGGTAAATA TCACTTGATA TGTCAACTTC 71514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCACTGG TAGTTGAGAT ATTAGTTGTC TTGGTAAATA TCACTTGATA TGTCAACTTC 256 TGGTTCAACG TTGAGAAATT TAGCGCGGAG GGTTCAACTT TCACGACAAC TCCTTTTGGT 71454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTCAACG TTGAGAAATT TAGCGCGGAG GGTTCAACTT TCACGACAAC TCCTTTTGGT 316 GAAACTATCT CCACTTTGTA AGATGATTTA GCATCACCAA CATT 71410 |||||||||| |||||||||| |||||||||| |||||||||| |||| GAAACTATCT CCACTTTGTA AGATGATTTA GCATCACCAA CATT 360 hqPGS_C08HBa0165B06.1-_SGN-E237418+ (71753 71410) ******************************************************************************** EST sequence 71 -strand 446 n (File: SGN-E353214-) 1 TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 61 ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 121 ACCGCTCAGT GATGAGCTGT TCACCAGAGT GGAGGAACGA GCCACGTGTC ATGCAAAAGA 181 GCTTCTTCAG AATCTTCAGT TTTTTCATAT TGTTGCTTCA CTTTCTCTTG TGTAGAGATT 241 TGAATGTTTA ATTAGTAGAA TTTTCAAAAG AGAGACAAAG AGGCTCTAGT GAAAGTCTAT 301 ATGTCTCTCA TGTATTAGAA TGAAATATTG TTAGAGAAAT TAAGACTGAC TTGTAGTTTG 361 GTTTGGTTGA TAATATATGA TCGGTAAAAA TTAAATGTTT AAATTTGTGA TTTAACCAAA 421 AAAAAAAAAA AAAAAAAAAA AAACTC Predicted gene structure (within gDNA segment 74844 to 69670): Exon 1 73603 73540 ( 64 n); cDNA 65 127 ( 63 n); score: 0.906 PPA cDNA 418 444 MATCH C08HBa0165B06.1- SGN-E353214- 0.906 64 0.143 C PGS_C08HBa0165B06.1-_SGN-E353214- (73603 73540) Alignment (genomic DNA sequence = upper lines): CAATTGGACT TCTCACAGAG TGCCTATTAG AAGTCCATTT CAAGAATCCC TCAACAACAC 73544 |||||||||| |||||| ||| |||||||||| ||||||| || |||||||||| |||| ||| | CAATTGGACT TCTCACTGAG TGCCTATTAG AAGTCCACTT CAAGAATCCC TCAATAAC-C 123 TATC 73540 || GCTC 127 hqPGS_C08HBa0165B06.1-_SGN-E353214- (73603 73540) ******************************************************************************** EST sequence 87 -strand 552 n (File: SGN-E207645-) 1 TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 61 AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 121 TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 181 TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 241 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 301 AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 361 AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 421 CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 481 ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGCTGCA AATATAAGAA 541 GTGCTGATGT AT Predicted gene structure (within gDNA segment 75776 to 73754): Exon 1 75130 74597 ( 534 n); cDNA 1 533 ( 533 n); score: 0.934 MATCH C08HBa0165B06.1- SGN-E207645- 0.934 534 0.967 C PGS_C08HBa0165B06.1-_SGN-E207645- (75130 74597) Alignment (genomic DNA sequence = upper lines): TGGACTCACA AACTCCTTTC CACTTAGCAG GCGGAGGAGG CATCCCAACG TCACTAAACG 75071 ||| |||||| |||||||||| |||||||||| |||| ||||| ||||||||| || ||||| | TGGGCTCACA AACTCCTTTC CACTTAGCAG GCGGGGGAGG CATCCCAACA TCGCTAAATG 60 AAGGATGATC AGGAAGAATT CCAGTGTCTA TAACTCCGAT AATCACGCCT TTTCCATAGT 75011 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| | |||| | | AAGGATGATC AGGAAGAATT CCAGTGTCTA GAACTCCGAT GATCACGCCT TCTCCAAAAT 120 TGGAATCCTT CCATACACCC ATGTTCTGCT GCAAACCAAG AAAGCTTGAA GTATGAGTAG 74951 ||||||| || ||| | ||| |||||||||| |||||||||| ||| |||| | |||||||||| TGGAATCTTT CCACAAGCCC ATGTTCTGCT GCAAACCAAG AAAACTTGGA GTATGAGTAG 180 TATCCAAGGA CAAAGTCCTC TGTTTCTGAG CGGAGACAAA GCCGTGTATC TTCTCCATTT 74891 | | ||| || |||| ||||| |||||||||| | |||||||| ||||||| | |||||||||| TGTGCAAAGA CAAAATCCTC TGTTTCTGAG CAGAGACAAA GCCGTGTTTT TTCTCCATTT 240 CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 74831 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCACTTG TTCTGCAGTT AATCTTGCTG CAAACCCTGT CATCACATTG TGATAAGAAT 300 AGATCATTGT AGCAGCCTCT TCATTTCCGC TAGAGCTGAT TGCGGTAGTA GTTTTAGGCA 74771 |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| AGATCATTGT AGCAGCCTCT TCATTTCCAC TAGAGCTAAT TGCGGTAGTA GTTTTAGGCA 360 AAAAAGAAAG GTAATAGCTA TCTAAATCCG TTAACGATGA TTGAGTAGAA ATTAGGCTTT 74711 |||||||||| |||||||||| ||||||||| |||||||||| ||||| || | |||||||||| AAAAAGAAAG GTAATAGCTA TCTAAATCCA TTAACGATGA TTGAGCAGTA ATTAGGCTTT 420 CGGGGGATTC AACATGGACT AGATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 74651 | |||||||| ||||||||| | |||||||| |||||||||| |||||||||| |||||||||| CAGGGGATTC AACATGGACG ATATAAGTCT CGAGATTACT CTGAATAGTA GGCCATGGGA 480 AAGAGCAAAA GATGAAAACA AGAAGGATTT TCAAGAATCC CATGGCTTGC AAAT 74597 | || ||||| |||||||||| | |||||||| |||||||||| |||||| ||| |||| ATGAACAAAA GATGAAAACA AAAAGGATTT TCAAGAATCC CATGGC-TGC AAAT 533 hqPGS_C08HBa0165B06.1-_SGN-E207645- (75130 74597) ******************************************************************************** EST sequence 127 -strand 533 n (File: SGN-E330205-) 1 AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 61 CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 121 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 181 ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 241 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 301 TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 361 GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 421 CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 481 AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAATACAAC AAG Predicted gene structure (within gDNA segment 76334 to 73395): Exon 1 75121 74597 ( 525 n); cDNA 1 525 ( 525 n); score: 0.924 MATCH C08HBa0165B06.1- SGN-E330205- 0.924 525 0.985 C PGS_C08HBa0165B06.1-_SGN-E330205- (75121 74597) Alignment (genomic DNA sequence = upper lines): AAACTCCTTT CCACTTAGCA GGCGGAGGAG GCATCCCAAC GTCACTAAAC GAAGGATGAT 75062 |||||||||| |||||||||| ||||| |||| |||||||||| || ||||| |||||||| | AAACTCCTTT CCACTTAGCA GGCGGGGGAG GCATCCCAAC ATCGCTAAAA GAAGGATGGT 60 CAGGAAGAAT TCCAGTGTCT ATAACTCCGA TAATCACGCC TTTTCCATAG TTGGAATCCT 75002 |||||| ||| |||||||||| |||||||||| | |||||||| ||| |||||| |||||||||| CAGGAATAAT TCCAGTGTCT ATAACTCCGA TGATCACGCC TTTCCCATAG TTGGAATCCT 120 TCCATACACC CATGTTCTGC TGCAAACCAA GAAAGCTTGA AGTATGAGTA GTATCCAAGG 74942 |||||||||| |||||||||| |||||||||| |||| |||| |||||||||| || | ||| | TCCATACACC CATGTTCTGC TGCAAACCAA GAAAACTTGG AGTATGAGTA GTGTGCAAAG 180 ACAAAGTCCT CTGTTTCTGA GCGGAGACAA AGCCGTGTAT CTTCTCCATT TCCTTCACTT 74882 ||||| |||| |||||||||| || ||||||| |||||||| | ||||||||| |||||||||| ACAAAATCCT CTGTTTCTGA GCAGAGACAA AGCCGTGTTT TTTCTCCATT TCCTTCACTT 240 GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAAGAA TAGATCATTG 74822 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| | GTTCTGCAGT TAATCTTGCT GCAAACCCTG TCATCACATT GTGATAGGAA TAGATCATGG 300 TAGCAGCCTC TTCATTTCCG CTAGAGCTGA TTGCGGTAGT AGTTTTAGGC AAAAAAGAAA 74762 |||||||||| ||||||||| || || || | ||| ||||| |||||||||| |||||||||| TAGCAGCCTC TTCATTTCCA CTCGAACTAA TTGTGGTAGC AGTTTTAGGC AAAAAAGAAA 360 GGTAATAGCT ATCTAAATCC GTTAACGATG ATTGAGTAGA AATTAGGCTT TCGGGGGATT 74702 |||||||||| | |||||||| |||||| ||| ||||||||| || ||||||| || ||||||| GGTAATAGCT ACCTAAATCC GTTAACAATG ATTGAGTAGT AACTAGGCTT TCAGGGGATT 420 CAACATGGAC TAGATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATGGG AAAGAGCAAA 74642 |||||||||| | ||||||| |||||||||| |||||||||| ||||||| || ||||| || | CAACATGGAC GATATAAGTC TCGAGATTAC TCTGAATAGT AGGCCATTGG AAAGAACAGA 480 AGATGAAAAC AAGAAGGATT TTCAAGAATC CCATGGCTTG CAAAT 74597 |||||||||| |||| |||| ||||| |||| |||||||| | | ||| AGATGAAAAC AAGACCGATT TTCAATAATC CCATGGCTAG CTAAT 525 hqPGS_C08HBa0165B06.1-_SGN-E330205- (75121 74597) ******************************************************************************** EST sequence 98 -strand 469 n (File: SGN-E207387-) 1 TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 61 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 121 GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 181 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 241 GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 301 AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 361 TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 421 AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAATACA Predicted gene structure (within gDNA segment 75744 to 73787): Exon 1 75062 74597 ( 466 n); cDNA 1 466 ( 466 n); score: 0.929 MATCH C08HBa0165B06.1- SGN-E207387- 0.929 466 0.994 C PGS_C08HBa0165B06.1-_SGN-E207387- (75062 74597) Alignment (genomic DNA sequence = upper lines): TCAGGAAGAA TTCCAGTGTC TATAACTCCG ATAATCACGC CTTTTCCATA GTTGGAATCC 75003 ||||||| || |||||||||| |||||||||| || ||||||| |||| ||||| |||||||||| TCAGGAATAA TTCCAGTGTC TATAACTCCG ATGATCACGC CTTTCCCATA GTTGGAATCC 60 TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAGCTTG AAGTATGAGT AGTATCCAAG 74943 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| ||| | ||| TTCCATACAC CCATGTTCTG CTGCAAACCA AGAAAACTTG GAGTATGAGT AGTGTGCAAA 120 GACAAAGTCC TCTGTTTCTG AGCGGAGACA AAGCCGTGTA TCTTCTCCAT TTCCTTCACT 74883 |||||| ||| |||||||||| ||| |||||| ||||||||| | |||||||| |||||||||| GACAAAATCC TCTGTTTCTG AGCAGAGACA AAGCCGTGTT TTTTCTCCAT TTCCTTCACT 180 TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAAGA ATAGATCATT 74823 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||||| TGTTCTGCAG TTAATCTTGC TGCAAACCCT GTCATCACAT TGTGATAGGA ATAGATCATG 240 GTAGCAGCCT CTTCATTTCC GCTAGAGCTG ATTGCGGTAG TAGTTTTAGG CAAAAAAGAA 74763 |||||||||| |||||||||| || || || |||| ||||| ||||||||| |||||||||| GTAGCAGCCT CTTCATTTCC ACTCGAACTA ATTGTGGTAG CAGTTTTAGG CAAAAAAGAA 300 AGGTAATAGC TATCTAAATC CGTTAACGAT GATTGAGTAG AAATTAGGCT TTCGGGGGAT 74703 |||||||||| || ||||||| ||||||| || |||||||||| || |||||| ||| |||||| AGGTAATAGC TACCTAAATC CGTTAACAAT GATTGAGTAG TAACTAGGCT TTCAGGGGAT 360 TCAACATGGA CTAGATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATGG GAAAGAGCAA 74643 |||||||||| | | |||||| |||||||||| |||||||||| |||||||| | |||||| || TCAACATGGA CGATATAAGT CTCGAGATTA CTCTGAATAG TAGGCCATTG GAAAGAACAG 420 AAGATGAAAA CAAGAAGGAT TTTCAAGAAT CCCATGGCTT GCAAAT 74597 |||||||||| |||||||||| |||||| ||| ||||||||| || ||| AAGATGAAAA CAAGAAGGAT TTTCAATAAT CCCATGGCTA GCTAAT 466 hqPGS_C08HBa0165B06.1-_SGN-E207387- (75062 74597) ******************************************************************************** EST sequence 28 -strand 779 n (File: SGN-E539488-) 1 ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 61 ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 121 CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 181 TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 241 TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 301 GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 361 CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 421 CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 481 ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 541 CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 601 CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 661 GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 721 TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA Predicted gene structure (within gDNA segment 77544 to 73360): Exon 1 75392 74617 ( 776 n); cDNA 1 779 ( 779 n); score: 0.891 MATCH C08HBa0165B06.1- SGN-E539488- 0.891 776 0.996 C PGS_C08HBa0165B06.1-_SGN-E539488- (75392 74617) Alignment (genomic DNA sequence = upper lines): ATAGCTGCAT CCATAGCAGC TAAGACATCA GTGTCAGCAC AA---CCATC AGAATTACAT 75336 |||||||||| |||| ||||| ||| | ||| |||||| || | ||||| |||| ||||| ATAGCTGCAT CCATGGCAGC TAAAATATCG CTGTCAGAAC ANCCGCCATC AGAACTACAT 60 ACCTTATATA CCGCTATGTG GGCAAAAGGG GCAACACCAG CAGCAGTGCC ATTAGCATTA 75276 |||||||||| |||||||||| ||| | |||| ||||||||| ||||||| || ||||||||| ACCTTATATA CCGCTATGTG GGCTAGAGGG GCAACACCAA CAGCAGTACC ATTAGCATTC 120 CCAAATACAT TGGCACCATT CACAAACGCT CCAGCTGCTG TGCTTGCTGT GTGTGTACCA 75216 ||||||| || | ||||| || |||||| ||| ||||| |||| ||| |||||| ||||||||| CCAAATATAT TAGCACCTTT CACAAAGGCT CCAGCAGCTG TGCCTGCTGT ATGTGTACCA 180 TGTCCATCAT CGTCTATCGG GGAACCATGG CCAAGTTGGT AAGACCTGGC TCCAATGAGC 75156 ||||||| || | |||||||| |||||||| | |||||||| | |||||||||| |||||||||| TGTCCATTAT CATCTATCGG GGAACCATTG CCAAGTTGAT AAGACCTGGC TCCAATGAGC 240 TTGTTGTTAC ACTTGTTTGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGA 75096 |||||||||| |||| | || |||||||||| |||||||||| |||||||||| ||||||||| TTGTTGTTAC ACTTTGTGGT GAAATTGGAC TCACAAACTC CTTTCCACTT AGCAGGCGGG 300 GGAGGCATCC CAACGTCACT AAACGAAGGA TGATCAGGAA GAATTCCAGT GTCTATAACT 75036 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| ||||| |||| GGAGGCATCC CAACATCACT AAATGAAGGA TGATCAGGAA GAATTCCAGT GTCTAGAACT 360 CCGATAATCA CGCCTTTTCC ATAGTTGGAA TCCTTCCATA CACCCATGTT CTGCTGCAAA 74976 ||||| |||| | ||| ||| | | |||||| || ||||| | |||||||| ||| |||||| CCGATGATCA CACCTACTCC AAAATTGGAA TCTTTCCACA AGCCCATGTT CTGTTGCAAA 420 CCAAGAAAGC TTGAAGTATG AGTAGTATCC AAGGACAAAG TCCTCTGTTT CTGAGCGGAG 74916 |||||||| | ||| |||||| |||||||| | ||||| ||| |||||||||| |||||| ||| CCAAGAAAAC TTGGAGTATG AGTAGTATGC AAGGAGAAAA TCCTCTGTTT CTGAGCAGAG 480 ACAAAGCCGT GTATCTTCTC CATTTCCTTC ACTTGTTCTG CAGTTAATCT TGCTGCAAAC 74856 |||||||||| || | ||||| |||||||||| |||||| ||| |||||||||| ||||||||| ACAAAGCCGT GTTTTTTCTC CATTTCCTTC ACTTGTGCTG CAGTTAATCT TGCTGCAAAA 540 CCTGTCATCA CATTGTGATA AGAATAGATC ATTGTAGCAG CCTCTTCATT TCCGCTAGAG 74796 ||| |||||| ||||||| || || |||||| || |||||| ||||||||| ||| || ||| CCTTTCATCA CATTGTGGTA GGAGTAGATC ATGCTAGCAG CCTCTTCATC TCCACTCGAG 600 CTGATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTATCTAA ATCCGTTAAC 74736 || ||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| CTAATTGCGG TAGTAGTTTT AGGCAAAAAA GAAAGGTAAT AGCTCTCTAA ATCCGTTAAT 660 GATGATTGAG TAGAAATTAG GCTTTCGGGG GATTCAACAT GGACTAGATA AGTCTCGAGA 74676 |||||||||| |||||||| | | |||| || |||||||||| |||||| ||| |||||||||| GATGATTGAG TAGAAATTTG GTTTTCAGGT GATTCAACAT GGACTATATA AGTCTCGAGA 720 TTACTCTGAA TAGTAGGCCA TGGGAAAGAG CAAAAGATGA AAACAAGAAG GATTTTCAA 74617 | |||||||| || |||||| | |||||||| ||||| |||| | | |||||| |||||||| TCACTCTGAA TACTAGGCCT TAGGAAAGAG CAAAATATGA AGATAAGAAG AATTTTCAA 779 hqPGS_C08HBa0165B06.1-_SGN-E539488- (75392 74617) ******************************************************************************** EST sequence 15 -strand 439 n (File: SGN-E282403-) 1 AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 61 AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 121 ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 181 GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 241 GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 301 TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 361 TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 421 AAGATAAGAA GAATTTTCA Predicted gene structure (within gDNA segment 77070 to 73370): Exon 1 75056 74618 ( 439 n); cDNA 1 439 ( 439 n); score: 0.893 MATCH C08HBa0165B06.1- SGN-E282403- 0.893 439 1.000 C PGS_C08HBa0165B06.1-_SGN-E282403- (75056 74618) Alignment (genomic DNA sequence = upper lines): AGAATTCCAG TGTCTATAAC TCCGATAATC ACGCCTTTTC CATAGTTGGA ATCCTTCCAT 74997 |||||||||| |||||| ||| |||||| ||| || ||| || || | ||||| ||| ||||| AGAATTCCAG TGTCTAGAAC TCCGATGATC ACACCTACTC CAAAATTGGA ATCTTTCCAC 60 ACACCCATGT TCTGCTGCAA ACCAAGAAAG CTTGAAGTAT GAGTAGTATC CAAGGACAAA 74937 | ||||||| |||| ||||| ||||||||| |||| ||||| ||||||||| |||||| ||| AAGCCCATGT TCTGTTGCAA ACCAAGAAAA CTTGGAGTAT GAGTAGTATG CAAGGAGAAA 120 GTCCTCTGTT TCTGAGCGGA GACAAAGCCG TGTATCTTCT CCATTTCCTT CACTTGTTCT 74877 ||||||||| ||||||| || |||||||||| ||| | |||| |||||||||| ||||||| || ATCCTCTGTT TCTGAGCAGA GACAAAGCCG TGTTTTTTCT CCATTTCCTT CACTTGTGCT 180 GCAGTTAATC TTGCTGCAAA CCCTGTCATC ACATTGTGAT AAGAATAGAT CATTGTAGCA 74817 |||||||||| |||||||||| ||| ||||| |||||||| | | || ||||| ||| ||||| GCAGTTAATC TTGCTGCAAA ACCTTTCATC ACATTGTGGT AGGAGTAGAT CATGCTAGCA 240 GCCTCTTCAT TTCCGCTAGA GCTGATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 74757 |||||||||| ||| || || ||| |||||| |||||||||| |||||||||| |||||||||| GCCTCTTCAT CTCCACTCGA GCTAATTGCG GTAGTAGTTT TAGGCAAAAA AGAAAGGTAA 300 TAGCTATCTA AATCCGTTAA CGATGATTGA GTAGAAATTA GGCTTTCGGG GGATTCAACA 74697 ||||| |||| |||||||||| ||||||||| ||||||||| || |||| || ||||||||| TAGCTCTCTA AATCCGTTAA TGATGATTGA GTAGAAATTT GGTTTTCAGG TGATTCAACA 360 TGGACTAGAT AAGTCTCGAG ATTACTCTGA ATAGTAGGCC ATGGGAAAGA GCAAAAGATG 74637 ||||||| || |||||||||| || ||||||| ||| |||||| | ||||||| |||||| ||| TGGACTATAT AAGTCTCGAG ATCACTCTGA ATACTAGGCC TTAGGAAAGA GCAAAATATG 420 AAAACAAGAA GGATTTTCA 74618 || | ||||| | ||||||| AAGATAAGAA GAATTTTCA 439 hqPGS_C08HBa0165B06.1-_SGN-E282403- (75056 74618) ******************************************************************************** EST sequence 228 +strand 799 n (File: SGN-E548357+) 1 GGCCCCCCTC GAGTTTTTTT TTTTTTTTTT TACTGGAAAA AAAAACAGCA ATCCAATATG 61 ATTAATTGTG AATAATTTCT GCACTTATTT TTACATTTTA GATTGAAAGC ATTTTAGTTT 121 TATTCAGCAG ACACTCTAAC TGCAATTGGA CTTCTTACAG AGTGCCTATT AGAATTCCAC 181 TTCAAAAATC CCTCAACATC ACTGGTAGTT GAGATATTAG TTGTCTTGGT AAATATCACT 241 TGATATGTCA ACTTCTGGTT CAACGTTGAG AAATTTAGCG CGGAGGGTTC AACTTTCACG 301 ACAACTCCTT TTGGTGAAAC TATCTCCACT TTGTAAGATG ATTTAGCATC ACCAACATTG 361 GTTACGGTTC TGGTATATGT CTGAGGAGTT GATCCAAGTC TGATGGAAAA TGAAGGATAA 421 TTTAGTTGCC CTTCAGGGAT ACGTTTTACC TCCGAGCAAT TCACCTTGCG TTGTAACACT 481 TTACCTACCT CCCGATTTGT GTAGTTCAAA CCACATAAAT AAGGAATGTT GATTTTGTGT 541 TTTTGTTGTT ATCCACGGAG GTAGGCCAAG CAGCAAGGAC GTTAACACCA GGACCGATTA 601 TGTCAGGTTT TAAGATGCCA GGACTTGCTA CGCTTGGTCC TCGTGAGGAA AATGAAGCAA 661 CTATAGGAGC ATTTTTGTCT CCAATTACAG TTCCATGGAA GGTGATTGAA GCAACCGGAT 721 TTGAAGATGA GTTCATATAG GCAAGAATTT TCTTTCCATC AGCATTTGAA ACATCCAATG 781 CAGGAAGGAC ATGAGCTTC Predicted gene structure (within gDNA segment 81080 to 73596): Exon 1 80000 79980 ( 21 n); cDNA 84 104 ( 21 n); score: 0.619 Intron 1 79979 79044 ( 936 n); Pd: 0.489 (s: 0), Pa: 0.931 (s: 0) Exon 2 79043 79018 ( 26 n); cDNA 105 129 ( 25 n); score: 0.577 Intron 2 79017 78207 ( 811 n); Pd: 0.900 (s: 0), Pa: 0.940 (s: 0) Exon 3 78206 78195 ( 12 n); cDNA 130 140 ( 11 n); score: 0.667 Intron 3 78194 76834 (1361 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 4 76833 76448 ( 386 n); cDNA 141 523 ( 383 n); score: 0.878 Intron 4 76447 76183 ( 265 n); Pd: 0.831 (s: 0.94), Pa: 0.000 (s: 0.90) Exon 5 76182 75907 ( 276 n); cDNA 524 799 ( 276 n); score: 0.851 PPA cDNA 31 13 MATCH C08HBa0165B06.1- SGN-E548357+ 0.867 721 0.902 C PGS_C08HBa0165B06.1-_SGN-E548357+ (80000 79980,79043 79018,78206 78195,76833 76448,76182 75907) Alignment (genomic DNA sequence = upper lines): CTTTTTTCTC CTTTTTTACT GGTCATCGAA CACCACCTCA TTTTTCTCCA AATTTATCAT 79941 ||| ||| | | |||| | CTTATTTTTA CATTTTAGAT T......... .......... .......... .......... 104 CGTCAATATC TTTTTTTATT TTTAGCTTTT CAAACAATCA ATTACAAATT TTAATTTGTT 79881 .......... .......... .......... .......... .......... .......... 104 CATTAGAAAA CAATGCCACC AATCATCTTT TTCTTTATGC CAAATCAACT CAAACATGAA 79821 .......... .......... .......... .......... .......... .......... 104 TTGAATCTAA GCTTAAAAAT AAAACATTAA TTAGATAAAA AGAAGTAGAA AAACTTAGGT 79761 .......... .......... .......... .......... .......... .......... 104 GATTTAAGTG TTTTTTTGAA AGAAAAAAAA AAGGAGGAAG AAGATGAAGT TGGGGTGGGG 79701 .......... .......... .......... .......... .......... .......... 104 TGGGGGGAGG GGGGAGCAGG TCTGAGCGGA GGCAGGAACA TACATACTTT AGGATTTTAT 79641 .......... .......... .......... .......... .......... .......... 104 TTTTTTTAAT TATAATTATT TTTTAGCAAG AAAAACAAAT TTAAGACACG TGGCTTCTTT 79581 .......... .......... .......... .......... .......... .......... 104 TAATTAATTA GTTTGCCATG TCATGGCAAG TGCATCACAC ACACTTGACA TTTTTTGTTG 79521 .......... .......... .......... .......... .......... .......... 104 ATTATCAAAA TGTGTCTAAT AGGAAAATTT TTATATAAGT AAAAGTGTTC AATAGGTAAA 79461 .......... .......... .......... .......... .......... .......... 104 AGATTAAATT GAGATGTCTA AATGAATAAT GAGGACAACT TTAAGGGGTC ACATATGACT 79401 .......... .......... .......... .......... .......... .......... 104 TTGGCCTAAT ATGAAGTATC ACATAAGAAG CATGAAGTGT TGTAAATTAT GAATAATAAT 79341 .......... .......... .......... .......... .......... .......... 104 AATATTAAAA CATTAGAATG AAATACAATA TGAACAAACA AGAAACGTCA ACATTAAAGC 79281 .......... .......... .......... .......... .......... .......... 104 ATAATGAAAC AATATAAGAG ACAACAGAAT AGACCATGGT GTGACGCATT GAAGAGTATG 79221 .......... .......... .......... .......... .......... .......... 104 GGTCGAGGTT TAATCGATTA TGTTTGCATA TTTCAAGCAA TGTAATGTTG TTAGTATTTT 79161 .......... .......... .......... .......... .......... .......... 104 ATGATTTATA AATAGTTCAT TATTTGTGTT AGAATGAACA TATATGTATA TCATACCTAA 79101 .......... .......... .......... .......... .......... .......... 104 AACATCCTTA ATGTTCTTTG TGTATGTTCC ATTGTGGCGT TTTGGTTGCT CGGTTAGGAC 79041 || .......... .......... .......... .......... .......... .......GA- 106 AAGTACTTTT GTTGTGGACA TAGATATCCC TCTAGAGAGT GCCACGTACA ATTGACCATG 78981 ||| | ||| ||| | || AAGCATTTTA GTTTTATTCA GCA....... .......... .......... .......... 129 TGAGAAAACA TTTTGAGGCA AATACAATTC AACAATTGGA ATTGTTTGAC CTTGCGCTTT 78921 .......... .......... .......... .......... .......... .......... 129 ATTTATAGTC ATTGCAAAGC AAAGTCGTAT CAATTTTGAT GGTGATGAAA GCAAGAAACC 78861 .......... .......... .......... .......... .......... .......... 129 TGTTAAAAGT ATTACAACAT AAAGAGATAG TAAATGTAAT TTCCAATGAA CTAAATTAAT 78801 .......... .......... .......... .......... .......... .......... 129 AAAAAAGAAA CAAATTACTG CATCGAAAGT ATTACAAACT GAACGACTTC AAAATGGAAA 78741 .......... .......... .......... .......... .......... .......... 129 AGTCTTTGGC CGACAATCTT TAGACTTGTT ATGGCAGAAC GTGGATATTG CCAAGAAAAG 78681 .......... .......... .......... .......... .......... .......... 129 CTGAGTATTG GAAGATATTA CAACAATAAA GCTCTACGAC TAAAGCTTTG GCCAATTAGG 78621 .......... .......... .......... .......... .......... .......... 129 AAGAAATCAC TTCAATTTAT AAGAAAAAGT CATATATGTC TCTTCTGTGT TAGGATTGTG 78561 .......... .......... .......... .......... .......... .......... 129 ACAATGCTAA TTAATTAATG CAAACATCTT GTAGTAATAT GGTGTTTCTT GTGGTACCTT 78501 .......... .......... .......... .......... .......... .......... 129 ACCATACATG ATTTTGGTAA AAGCTAATGA TGTTGTATCG TTACTGTTCT AATTGTGGAC 78441 .......... .......... .......... .......... .......... .......... 129 CGTATTGAAG TTTTATGCGA AAACAAACCA TAGACAAACA GTATTGAAGG TTTATGCAAA 78381 .......... .......... .......... .......... .......... .......... 129 AGCAAATCAT AGACAGGTGG TGAAGTTAGT TTGTTGTTTA GAAACTTTTT TTTTTTGTAA 78321 .......... .......... .......... .......... .......... .......... 129 TATGCGTAGA GCTGTACTAT ACCCTGTATT ATGCTCGTTA CTTATGGCCT TGTGATTTAG 78261 .......... .......... .......... .......... .......... .......... 129 GATAGATATT CAACTAAGTA TAGAGGAAAA TTACAATGAA ATTTCTTTTA TTAGGAAACT 78201 || ||| .......... .......... .......... .......... .......... ....GACACT 135 CACAATGTCA ACTATTTCAA AACAAACGAC AAGCTCCTTG CGGAACAACA AAAAAAGAGT 78141 | || C-TAAC.... .......... .......... .......... .......... .......... 140 GTCTGAATTA AAATCAGGAT TTTTTAGGAC TATCTGAATC TGTGGAGGAT CGAATTAGTG 78081 .......... .......... .......... .......... .......... .......... 140 CATAAGTTTG AAATAATCTG CTGTTAGAAG CTGCATATTA AAGAGAACCA TTAGGCACAA 78021 .......... .......... .......... .......... .......... .......... 140 TATTGCTAAC TACTTTTGCA TTTGACAGAG ATCCCAGCCA TGCAGATCAC TAAGCGAAGA 77961 .......... .......... .......... .......... .......... .......... 140 AATTGATAAT AACTGAAAAT CCATGCTTTC AGGCAGAATC AAGAATGAAA AGATAGAATT 77901 .......... .......... .......... .......... .......... .......... 140 TTACTTTACT AACCGTACTT ATTCATTAAA CAACAATTTG AGGAGTACTT TACTGTCCAT 77841 .......... .......... .......... .......... .......... .......... 140 ATTTTTTTTA TTCAACAACA ATATGAGGAT TTTTTTTACC TGATTTATTT GATTGAGGCA 77781 .......... .......... .......... .......... .......... .......... 140 CAGAAACGAT AACAGATTAA TGGGCAATAA CAACTTCTTG GAGACATTTA TATAGACGCC 77721 .......... .......... .......... .......... .......... .......... 140 TGAAGTATCT GAAAAGCCTG CTGAAGCTGA GTGTTGGAAA TTTTTTGTCC CACTGATCGA 77661 .......... .......... .......... .......... .......... .......... 140 AGAGTTTGAG CAGAAACTTG GACGAAGAGG ATGAGGCAAC GTTTAGTTTC TGGAGAATTA 77601 .......... .......... .......... .......... .......... .......... 140 AAGCAGCTAC TCTACGTCTC TGTTACATTG AACATGAGGC AACAGTTAGT CTGTGGTGAA 77541 .......... .......... .......... .......... .......... .......... 140 TTTAAAGCAG CAACTCTACG TCTCTGTTAC ATTGAACATG AGGCAACAAT TGGTCTGTGG 77481 .......... .......... .......... .......... .......... .......... 140 AGAATTAAAA GCAGCGACTC TTCGTCTCTT ACATTGAACA TGAGGTTAAG GCTGAGGCAA 77421 .......... .......... .......... .......... .......... .......... 140 CGGTTGATGT GTGAAGAAAT AATTTAGATA TCATCAGCTA ATTTATAATA AATTAATTTA 77361 .......... .......... .......... .......... .......... .......... 140 TTAAAATTAT AGAGATAAAA CAGTAAATTA ACTTTTGGGT TAAACTCTTC AGATTTATAA 77301 .......... .......... .......... .......... .......... .......... 140 TATGATATGA TTTGGTAAAT AAATAAAAAG ATACTAACTC AAAAGCATTT ATATGGAAGG 77241 .......... .......... .......... .......... .......... .......... 140 TACCAAAATA TTATGAGGGT TGAAGGTGGG GGGTTCAAGT GTGGTCAAGA CTCAAAGGAT 77181 .......... .......... .......... .......... .......... .......... 140 GGGGTTTAAG AAGATTGTTT TGCTAGAGAA AATATTTTGA TCGACCAATC AAACATGAAA 77121 .......... .......... .......... .......... .......... .......... 140 AAAATTGAAA ACAAAAAATG TTCTGCCGCC ACCAAAAAAG TAAAAGAAAT GATAAAAGGA 77061 .......... .......... .......... .......... .......... .......... 140 AAAATTGATT ACTATCAATA AGGATATGCA TTTATTTTCT TCAATTAGGT GTGAACAAAC 77001 .......... .......... .......... .......... .......... .......... 140 ATTGAAGCAG TATTTAATAT TAAAGACCAA ATAATTATCA ATATAGTACT GTAGTTTAAA 76941 .......... .......... .......... .......... .......... .......... 140 AAAAAAAGAA GAAGCATATA GTGGAAAGAA ACAGAACTTT CACTATAATC AAATGTTTGA 76881 .......... .......... .......... .......... .......... .......... 140 GTACTTTATG CAGTTATATA GCCAAATTTT CATTGGATCA ACAAAAGTGC AATTGGACTT 76821 ||| |||||||||| .......... .......... .......... .......... .......TGC AATTGGACTT 153 CTCACTGAGT GCCTATTAGA AGTCCACTTC AAGAATCCCT CAATAACCTC AGTGTTTGAG 76761 || || |||| |||||||||| | |||||||| || ||||||| ||| | | || ||||| CTTACAGAGT GCCTATTAGA ATTCCACTTC AAAAATCCCT CAACATCACT GGTAGTTGAG 213 CTATTAGCTG TCTTGGAAAA TGTCACTTGG TATGTCAACT TCTGGTTCAA CTCGGAGAAA 76701 |||||| || |||||| ||| | ||||||| |||||||||| |||||||||| | |||||| ATATTAGTTG TCTTGGTAAA TATCACTTGA TATGTCAACT TCTGGTTCAA CGTTGAGAAA 273 TTTAGCTCGG AGGGTTCAAC TTCGATGGCA ACGCCTTCTG GTGAAGCTAC CTCCACTTTG 76641 |||||| ||| |||||||||| || | | || || |||| || ||||| ||| |||||||||| TTTAGCGCGG AGGGTTCAAC TTTCACGACA ACTCCTTTTG GTGAAACTAT CTCCACTTTG 333 TAAGATGATT TAGCATCACC AACATTGGTC ACAGTTCTGG TATATGTCTG AGGAGTTGAT 76581 |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| TAAGATGATT TAGCATCACC AACATTGGTT ACGGTTCTGG TATATGTCTG AGGAGTTGAT 393 CCAAGGTCGT ATATGGAAAA CGAAGGATAG TTTAATTGTG CTTCAAGAAT ACTTTTCACC 76521 |||| ||| | |||||||| |||||||| |||| ||| ||||| | || || ||| ||| CCAA-GTC-T -GATGGAAAA TGAAGGATAA TTTAGTTGCC CTTCAGGGAT ACGTTTTACC 450 TCCGAGCAAT TCACCTTGCG TTGTAACAGG TTACCTACCT GCCGATTTGT GTAGTTCAAA 76461 |||||||||| |||||||||| |||||||| |||||||||| ||||||||| |||||||||| TCCGAGCAAT TCACCTTGCG TTGTAACACT TTACCTACCT CCCGATTTGT GTAGTTCAAA 510 CCACATAAAT AAGGTACATA GTCCTCGAAT GGTGTATCAT AAACTAGTCC TGGATCATTT 76401 |||||||||| ||| CCACATAAAT AAG....... .......... .......... .......... .......... 523 GCCCTCGATG GATTAACATG TCCTGCACCG ATTGCATAAA TGTCAGCAGG AAGGAGCCTT 76341 .......... .......... .......... .......... .......... .......... 523 TCGTCTAGTA TTGGACTGTT GGCTAGGTTT AATGTGTCAG CTGTTGTCAT CATTGCAGAC 76281 .......... .......... .......... .......... .......... .......... 523 TTAATAGCAG CAGGAGACCA ATCAGGATGT GTGCTCTTCA GCAGAGCAGC TACGCCACTA 76221 .......... .......... .......... .......... .......... .......... 523 AGGTGAGGGC AAGACATTGA TGTGCCTGAT ATGATATTGA ATGTGGATTT GGTGTTTTTG 76161 || |||| ||||| ||||||||| .......... .......... .......... ........GA ATGTTGATTT TGTGTTTTTG 545 TTATCATCCA CAGAGGTAGG CCAAGCAGCA AGGATATTAA CACCAGGACC GATTATGTCA 76101 || | ||||| | |||||||| |||||||||| |||| |||| |||||||||| |||||||||| TTGTTATCCA CGGAGGTAGG CCAAGCAGCA AGGACGTTAA CACCAGGACC GATTATGTCA 605 GGTTTCAAGA TGCCAATACT AGCTCCACTT GGTCCGCGAG ACGAAAATGC AGCTACTATG 76041 ||||| |||| ||||| ||| ||| | ||| ||||| || | | ||||||| ||| ||||| GGTTTTAAGA TGCCAGGACT TGCTACGCTT GGTCCTCGTG AGGAAAATGA AGCAACTATA 665 GGAGCATTTT TATCTCCAAT TATCGTTCCT TGGAACGTGA TTGTAGCAAC AGGGTTCGAT 75981 |||||||||| | |||||||| || ||||| ||||| |||| ||| |||||| || || || GGAGCATTTT TGTCTCCAAT TACAGTTCCA TGGAAGGTGA TTGAAGCAAC CGGATTTGAA 725 GTTGAGTTCA TATAAGCAAG GATTTTTGTT CCATCTGCAT CAGAAATATC CAATGCTGGA 75921 | |||||||| |||| ||||| ||||| || ||||| |||| |||| ||| |||||| ||| GATGAGTTCA TATAGGCAAG AATTTTCTTT CCATCAGCAT TTGAAACATC CAATGCAGGA 785 AGCACATGAG CATC 75907 || ||||||| | || AGGACATGAG CTTC 799 hqPGS_C08HBa0165B06.1-_SGN-E548357+ (76833 76448,76182 75907) ******************************************************************************** EST sequence 60 -strand 465 n (File: SGN-E202140-) 1 GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 61 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 121 TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 181 GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 241 GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTCAGAG ATCCACCAAT GGATATAGAA 301 AGAATATCTA CTCCATCATC TATAGCTGAA TCCATGGCAG CTAAAATATC ACTGTCAGAA 361 CAACCAACAG AGTTACACAC CTTATATATG GCTATATGGG CAAGAGGAGC AACACCAACT 421 GCAGTTCCAT TAGCATTTTC ATATACATTA GCACCTTTCA CAAAA Predicted gene structure (within gDNA segment 76560 to 71295): Exon 1 75716 75250 ( 467 n); cDNA 1 464 ( 464 n); score: 0.850 MATCH C08HBa0165B06.1- SGN-E202140- 0.850 467 1.004 C PGS_C08HBa0165B06.1-_SGN-E202140- (75716 75250) Alignment (genomic DNA sequence = upper lines): GCATTTTTTC CAGCATCAAA TAGAGCGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 75657 ||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGAGT TGGAAATCTT TGGACGATAA 60 GCAGATTCTC CTTCAAATTC CTCTCCATTT CCAAGCTTAA CAGTAGCTTT TAGCTTTCTA 75597 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| || ||||||| GCAGATTCTC CTTCAAATTC CTCTCCATTT CCGAGCTTAG CAGTAGCTTT TATCTTTCTA 120 TCTTGAGTGC TAGCGCCTAC TGTAAGAATC CACGGGGCTT CATTTCCTAC TGAGCCAGTA 75537 || | |||| | || ||||| |||||||||| || |||||| || |||| |||| ||| TCAAGCGTGC TGGCACCTAC TGTAAGAATC CAAGGGGCTG AGTTATCTAC TGAGGCAGGC 180 GAAGGACCAT TATTGCCGGC AGAGCAACTT ACAAGAATAC CTCTTTCTGT TGCACTATAT 75477 |||||||||| ||||||| || |||||||| |||||||| | |||||| ||| |||||| || GAAGGACCAT TATTGCCTGC TGAGCAACTA ACAAGAATGC CTCTTTGTGT TGCACTGTAC 240 GCCCCAAGAG CAATAGGATT ACTATAGAAA TCACTCGAAC CACCTCCACC AAGAGATATA 75417 ||||| |||| ||||| | | ||| | | ||| | | |||||| || |||||| GCCCCGAGAG CAATACTTTC ATCATAAAGA GGTCTC--A- GAGATCCACC AATGGATATA 297 GAAAGGATAT CTACGCCATC ATCTATAGCT GCATCCATAG CAGCTAAGAC ATCAGTGTCA 75357 ||||| |||| |||| ||||| |||||||||| | |||||| | ||||||| | |||| ||||| GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG CAGCTAAAAT ATCACTGTCA 357 GCACAACCAT CAGAATTACA TACCTTATAT ACCGCTATGT GGGCAAAAGG GGCAACACCA 75297 | ||||||| |||| ||||| ||||||||| | ||||| | |||||| ||| ||||||||| GAACAACCAA CAGAGTTACA CACCTTATAT ATGGCTATAT GGGCAAGAGG AGCAACACCA 417 GCAGCAGTGC CATTAGCATT ACCAAATACA TTGGCACCAT TCACAAA 75250 | ||||| | |||||||||| || ||||| || ||||| | ||||||| ACTGCAGTTC CATTAGCATT TTCATATACA TTAGCACCTT TCACAAA 464 hqPGS_C08HBa0165B06.1-_SGN-E202140- (75716 75250) ******************************************************************************** EST sequence 77 -strand 578 n (File: SGN-E244401-) 1 AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTGTGATG 61 TTTTGATGAC AATCATGCCA ACACCTCCAG CATCCTTCAC AACTTTTCCT TTAGCAACAC 121 TGGAGACGCC ACCGCCTGCT AGACATAATA CTATCTTTCC TCTTATAACA GGGCCCTTGA 181 GTGACCCTGG TTTGCAATAA GGGGTTTCCG ATGGATCTTT TGCATGTTTT GCAGCATCAA 241 ATAGAGTGAA GAATGTTGAG TTGGAAATCT GTGGACGATA AGCAGATTCT CCTTCGAATT 301 CCTCTCCATT TCCAAGCTTA ACAGTAGCTT TTATCTTTCT ATCAAGCGTG CTGGCACCTA 361 CTGTAAGAAT CCAAGGGGCT GCATTTCCAA CTGAGGCAAG CAAAGGGCCT CTATTACCTG 421 CAGAACAACT TACAAAAACA CCTCTTGCCG TTGCACTGTA TGCCCCAAGA GCAATAGGGT 481 CATCATAGAA AGAGTTGGGA GATCCACCAA TGGATATAGA AAGAATATCT ACTCCATCAT 541 CTATAGCTGA ATCCATGGCA GCTAAAATAT CACTGTCA Predicted gene structure (within gDNA segment 78770 to 69495): Exon 1 75937 75357 ( 581 n); cDNA 1 578 ( 578 n); score: 0.832 MATCH C08HBa0165B06.1- SGN-E244401- 0.832 581 1.005 C PGS_C08HBa0165B06.1-_SGN-E244401- (75937 75357) Alignment (genomic DNA sequence = upper lines): AAATATCCAA TGCTGGAAGC ACATGAGCAT CGGCTGATTT AGTGACACCA GAACGCTGCT 75878 |||||||||| ||||||||| |||||||||| | |||| ||| |||||||||| | | || | AAATATCCAA TGCTGGAAGA ACATGAGCAT CAGCTGTTTT AGTGACACCA TATTG-TGAT 59 G-GTTGATTA TAATCATGCC AACACCTCCA GCATCCTTTA CAGCTTGCCC TTTATCAACC 75819 | ||||| | ||||||||| |||||||||| |||||||| | || ||| || |||| |||| GTTTTGATGA CAATCATGCC AACACCTCCA GCATCCTTCA CAACTTTTCC TTTAGCAACA 119 CTCGGAACTC CACCACCTGC CAAACATATG ACTATCTTTC CTCTTATAAC GGGATCAGTA 75759 || | || | |||| ||||| | ||||| |||||||||| |||||||||| || | | CTGGAGACGC CACCGCCTGC TAGACATAAT ACTATCTTTC CTCTTATAAC AGGGCCCTTG 179 AGTGACCCTG ATCTGCAATA AGGTGTTTCA AATTCGTCAC TTGCATTTTT TCCAGCATCA 75699 |||||||||| | ||||||| ||| ||||| || || |||||| ||| | |||||||| AGTGACCCTG GTTTGCAATA AGGGGTTTCC GATGGATCTT TTGCATGTTT TGCAGCATCA 239 AATAGAGCGA AGAATGTTGA GTTGGAAATC TTTGGACGAT AAGCAGATTC TCCTTCAAAT 75639 ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| |||||| ||| AATAGAGTGA AGAATGTTGA GTTGGAAATC TGTGGACGAT AAGCAGATTC TCCTTCGAAT 299 TCCTCTCCAT TTCCAAGCTT AACAGTAGCT TTTAGCTTTC TATCTTGAGT GCTAGCGCCT 75579 |||||||||| |||||||||| |||||||||| |||| ||||| |||| | || ||| || ||| TCCTCTCCAT TTCCAAGCTT AACAGTAGCT TTTATCTTTC TATCAAGCGT GCTGGCACCT 359 ACTGTAAGAA TCCACGGGGC TTCATTTCCT ACTGAGCCAG TAGAAGGACC ATTATTGCCG 75519 |||||||||| |||| ||||| | ||||||| |||||| || |||| || |||| || ACTGTAAGAA TCCAAGGGGC TGCATTTCCA ACTGAGGCAA GCAAAGGGCC TCTATTACCT 419 GCAGAGCAAC TTACAAGAAT ACCTCTTTCT GTTGCACTAT ATGCCCCAAG AGCAATAGGA 75459 ||||| |||| |||||| || ||||||| | |||||||| | |||||||||| ||||||||| GCAGAACAAC TTACAAAAAC ACCTCTTGCC GTTGCACTGT ATGCCCCAAG AGCAATAGGG 479 TTACTATAGA AATCACTCGA ACCACCTCCA CCAAGAGATA TAGAAAGGAT ATCTACGCCA 75399 | | ||||| || | | | | |||| |||| |||| ||||||| || |||||| ||| TCATCATAGA AA-GAGTTG- -GGAGATCCA CCAATGGATA TAGAAAGAAT ATCTACTCCA 536 TCATCTATAG CTGCATCCAT AGCAGCTAAG ACATCAGTGT CA 75357 |||||||||| ||| |||||| |||||||| | |||| ||| || TCATCTATAG CTGAATCCAT GGCAGCTAAA ATATCACTGT CA 578 hqPGS_C08HBa0165B06.1-_SGN-E244401- (75937 75357) ******************************************************************************** EST sequence 79 -strand 560 n (File: SGN-E244422-) 1 GAACATGAGC ATCAGCTGTT TTAGTGACCC CATATTGTGA TGTTTTGATG ACAATCATGC 61 CAACACCTCC AGCATCCTTC ACAACTTTTC CTTTAGCAAC ACTGGAGACG CCACCGCCTG 121 CTAGACATAA TACTATCTTT CCTCTTATAA CAGGGCCCTT GAGTGACCCT GGTTTGCAAT 181 AAGGGGTTTC CGATGGATCT TTTGCATGTT TTGCAGCATC AAATAGAGTG AAGAATGTTG 241 AGTTGGAAAT CTGTGGACGA TAAGCAGATT CTCCTTCGAA TTCCTCTCCA TTTCCAAGCT 301 TAACAGTAGC TTTTATCTTT CTATCAAGCG TGCTGGCACC TACTGTAAGA ATCCAAGGGG 361 CTGCATTTCC AACTGAGGCA AGCAAAGGGC CTCTATTACC TGCAGAACAA CTTACAAAAA 421 CACCTCTTGC CGTTGCACTG TATGCCCCAA GAGCAATAGG GTCATCATAG AAAGAGTTGG 481 GAGATCCACC AATGGATATA GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG 541 CAGCTAAAAT ATCACTGTCA Predicted gene structure (within gDNA segment 78590 to 69495): Exon 1 75917 75357 ( 561 n); cDNA 3 560 ( 558 n); score: 0.826 MATCH C08HBa0165B06.1- SGN-E244422- 0.826 561 1.002 C PGS_C08HBa0165B06.1-_SGN-E244422- (75917 75357) Alignment (genomic DNA sequence = upper lines): ACATGAGCAT CGGCTGATTT AGTGACACCA GAACGCTGCT GG-TTGATTA TAATCATGCC 75859 |||||||||| | |||| ||| |||||| ||| | | || | | ||||| | ||||||||| ACATGAGCAT CAGCTGTTTT AGTGACCCCA TATTG-TGAT GTTTTGATGA CAATCATGCC 61 AACACCTCCA GCATCCTTTA CAGCTTGCCC TTTATCAACC CTCGGAACTC CACCACCTGC 75799 |||||||||| |||||||| | || ||| || |||| |||| || | || | |||| ||||| AACACCTCCA GCATCCTTCA CAACTTTTCC TTTAGCAACA CTGGAGACGC CACCGCCTGC 121 CAAACATATG ACTATCTTTC CTCTTATAAC GGGATCAGTA AGTGACCCTG ATCTGCAATA 75739 | ||||| |||||||||| |||||||||| || | | |||||||||| | ||||||| TAGACATAAT ACTATCTTTC CTCTTATAAC AGGGCCCTTG AGTGACCCTG GTTTGCAATA 181 AGGTGTTTCA AATTCGTCAC TTGCATTTTT TCCAGCATCA AATAGAGCGA AGAATGTTGA 75679 ||| ||||| || || |||||| ||| | |||||||| ||||||| || |||||||||| AGGGGTTTCC GATGGATCTT TTGCATGTTT TGCAGCATCA AATAGAGTGA AGAATGTTGA 241 GTTGGAAATC TTTGGACGAT AAGCAGATTC TCCTTCAAAT TCCTCTCCAT TTCCAAGCTT 75619 |||||||||| | |||||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGGAAATC TGTGGACGAT AAGCAGATTC TCCTTCGAAT TCCTCTCCAT TTCCAAGCTT 301 AACAGTAGCT TTTAGCTTTC TATCTTGAGT GCTAGCGCCT ACTGTAAGAA TCCACGGGGC 75559 |||||||||| |||| ||||| |||| | || ||| || ||| |||||||||| |||| ||||| AACAGTAGCT TTTATCTTTC TATCAAGCGT GCTGGCACCT ACTGTAAGAA TCCAAGGGGC 361 TTCATTTCCT ACTGAGCCAG TAGAAGGACC ATTATTGCCG GCAGAGCAAC TTACAAGAAT 75499 | ||||||| |||||| || |||| || |||| || ||||| |||| |||||| || TGCATTTCCA ACTGAGGCAA GCAAAGGGCC TCTATTACCT GCAGAACAAC TTACAAAAAC 421 ACCTCTTTCT GTTGCACTAT ATGCCCCAAG AGCAATAGGA TTACTATAGA AATCACTCGA 75439 ||||||| | |||||||| | |||||||||| ||||||||| | | ||||| || | | | ACCTCTTGCC GTTGCACTGT ATGCCCCAAG AGCAATAGGG TCATCATAGA AA-GAGTTG- 479 ACCACCTCCA CCAAGAGATA TAGAAAGGAT ATCTACGCCA TCATCTATAG CTGCATCCAT 75379 | |||| |||| |||| ||||||| || |||||| ||| |||||||||| ||| |||||| -GGAGATCCA CCAATGGATA TAGAAAGAAT ATCTACTCCA TCATCTATAG CTGAATCCAT 538 AGCAGCTAAG ACATCAGTGT CA 75357 |||||||| | |||| ||| || GGCAGCTAAA ATATCACTGT CA 560 hqPGS_C08HBa0165B06.1-_SGN-E244422- (75917 75357) ******************************************************************************** EST sequence 37 -strand 771 n (File: SGN-E540271-) 1 GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 61 TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 121 TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 181 GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 241 ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 301 TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 361 TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 421 CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 481 GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 541 TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 601 CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 661 TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TGTACTTCCA CCAAGGGAGA 721 TTGAAAGAAT ATCTACACCA TCATCTATAG CTGCATCCAT GGCAGCTAAA A Predicted gene structure (within gDNA segment 79217 to 72602): Exon 1 76141 75370 ( 772 n); cDNA 1 769 ( 769 n); score: 0.808 MATCH C08HBa0165B06.1- SGN-E540271- 0.808 772 1.001 C PGS_C08HBa0165B06.1-_SGN-E540271- (76141 75370) Alignment (genomic DNA sequence = upper lines): GCCAAGCAGC AAGGATATTA ACACCAGGAC CGATTATGTC AGGTTTCAAG ATGCCAATAC 76082 |||||||||| ||||| ||| |||||||||| |||||||||| |||||| ||| |||||| || GCCAAGCAGC AAGGACGTTA ACACCAGGAC CGATTATGTC AGGTTTTAAG ATGCCAGGAC 60 TAGCTCCACT TGGTCCGCGA GACGAAAATG CAGCTACTAT GGGAGCATTT TTATCTCCAA 76022 | ||| | || |||||| || || ||||||| ||| ||||| ||||||||| || ||||||| TTGCTACGCT TGGTCCTCGT GAGGAAAATG AAGCAACTAT AGGAGCATTT TTGTCTCCAA 120 TTATCGTTCC TTGGAACGTG ATTGTAGCAA CAGGGTTCGA TGTTGAGTTC ATATAAGCAA 75962 ||| ||||| ||||| ||| |||| ||||| | || || || | ||||||| ||||| |||| TTACAGTTCC ATGGAAGGTG ATTGAAGCAA CCGGATTTGA AGATGAGTTC ATATAGGCAA 180 GGATTTTTGT TCCATCTGCA TCAGAAATAT CCAATGCTGG AAGCACATGA GCATCGGCTG 75902 | ||||| | |||||| ||| | |||| || ||||||| || ||| |||||| || || |||| GAATTTTCTT TCCATCAGCA TTTGAAACAT CCAATGCAGG AAGGACATGA GCTTCAGCTG 240 ATTTAGTGAC ACCAGAACGC TGCTGGTTGA TTATAATCAT GCCAACACCT CCAGCATCCT 75842 ||||||| || ||| || | |||| | | |||||| |||||||||| |||||||||| ATTTAGTCAC ACCCTCTTCT TGTTCATTGA TGAGAATCAT GCCAACACCT CCAGCATCCT 300 TTACAGCTTG CCCTTTATCA ACCCTCGGAA CTCCACCACC TGCCAAACAT ATGACTATCT 75782 |||| | ||| |||| | || || || ||| | || | |||||| | |||||||| TTACGGATTG TCCTTGAGCA ACTCTGAGAA GACTTATACT TCGCAAACAC AAGACTATCT 360 TTCCTCTTAT AACGGGATCA GTAAGTGACC CTGATCTGCA ATAAGGTGTT TCAAATTCGT 75722 | ||| | || | | || ||| ||||||| | ||| || || | |||| | ||||| | TACCTTTGAT AGCAGGGTCA TTAAGTGAGC CTGGACTACA AAAAGGCGCG CTAAATTGAT 420 CACTTGCATT TTTTCCAGCA TCAAATAGAG CGAAGAATGT TGAGTTGGAA ATCTTTGGAC 75662 ||||| |||| ||||||||| ||| |||||| ||||||||| |||||||||| |||||||| CACTTTCATT CTTTCCAGCA TCATATAGAG GGAAGAATGT TGAGTTGGAA GTCTTTGGAT 480 GATAAGCAGA TTCTCCTTCA AATTCCTCTC CATTTCCAAG CTTAACAGTA GCTTTTAGCT 75602 |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| | || || | GATAAGCAGA TTCTCCTTCA AATTCCTCGC TATTTCCAAG CTTAACAGTA ACCTTCAGTT 540 TTCTATCTTG AGTGCTAGCG CCTACTGTAA GAATCCACGG GGCTTCATTT CCTACTGAGC 75542 ||||||| || ||| || || || || || | |||||||||| ||||||||| |||| | || TTCTATCATG AGTACTGGCA CCAACAGTGA GAATCCACGG GGCTTCATTA GCTACAGTGC 600 CAGTAGAAGG ACCATTATTG CCGGCAGAGC AACTTACAAG AATACCTCTT TCTGTTGCAC 75482 || || || ||| ||||| || || ||| |||||||| |||||||||| |||||||||| CAAGCGACGG ACCGCTATTG CCTGCTGAGG CACTTACAAA AATACCTCTT TCTGTTGCAC 660 TATATGCCCC AAGAGCAATA GGATTACTAT AGAAATCACT CGAACCACCT CCACCAAGAG 75422 | || | ||| ||||||||| || | || |||| | | || | |||||||| | TGTACGTCCC GAGAGCAATA CCATCATCAT GGAAAGGTTT TG---TACTT CCACCAAGGG 717 ATATAGAAAG GATATCTACG CCATCATCTA TAGCTGCATC CATAGCAGCT AA 75370 | || ||||| |||||||| |||||||||| |||||||||| ||| |||||| || AGATTGAAAG AATATCTACA CCATCATCTA TAGCTGCATC CATGGCAGCT AA 769 hqPGS_C08HBa0165B06.1-_SGN-E540271- (76141 75370) ******************************************************************************** EST sequence 32 -strand 655 n (File: SGN-E335107-) 1 CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 61 GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 121 GCTGATTTAG TGACACCATA TTGTGATGGG TTGATGATAA TCATGCCAAC ACCTCCAGCA 181 TCCTTCACAG CTTGTCCTTT ATCAACATTG GCTACATGGC CGAGTGCTGA ACATAATACT 241 ATCTTTCCTC TTATAGCAGG GTCAGTGAGT GAACCTCGTC TGCAATAAGG GGTTTCGGAT 301 GGATCTTTTG CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGCGTT GGAAATCTTT 361 GGACGATAAG CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCGTAAC AGTAGCTTTT 421 ATCTTTCTGT CAAGCGTGCT GGCACCTACC GTAAGAATCC AAGGGGCGGT GTTTACTGCT 481 GTGATAAAGG ATGGACCACT ATTTCCAGCA GAACAACTTA CAAGAATTCC TCTTTCCGTT 541 GCACTGTACG CCCCGATAGC AATATTGTCT CTATGGAAAG GGATTGGACC TCCACTAAGG 601 GACATTGAAA GAATATCTAC TCCATCATCT ATAGCTGAAT CCATGGCAGC TAAAA Predicted gene structure (within gDNA segment 77715 to 69569): Exon 1 76025 75370 ( 656 n); cDNA 1 653 ( 653 n); score: 0.824 MATCH C08HBa0165B06.1- SGN-E335107- 0.824 656 1.002 C PGS_C08HBa0165B06.1-_SGN-E335107- (76025 75370) Alignment (genomic DNA sequence = upper lines): CCAATTATCG TTCCTTGGAA CGTGATTGTA GCAACAGGGT TCGATGTTGA GTTCATATAA 75966 |||||||| | |||||||||| | |||||| ||||||||| | |||||||| |||||| ||| CCAATTATTG TTCCTTGGAA TGCAATTGTA GCAACAGGGC TTGATGTTGA GTTCATGTAA 60 GCAAGGATTT TTGTTCCATC TGCATCAGAA ATATCCAATG CTGGAAGCAC ATGAGCATCG 75906 ||||| |||| ||||||| || |||| | ||| | | |||||| ||||||| || ||||||||| GCAAGAATTT TTGTTCCGTC TGCAGCTGAA ACAACCAATG CTGGAAGAAC ATGAGCATCA 120 GCTGATTTAG TGACACCAGA ACGCTGCT-G GTTGATTATA ATCATGCCAA CACCTCCAGC 75847 |||||||||| |||||||| | | || | | |||||| ||| |||||||||| |||||||||| GCTGATTTAG TGACACCATA TTG-TGATGG GTTGATGATA ATCATGCCAA CACCTCCAGC 179 ATCCTTTACA GCTTGCCCTT TATCAACCCT CGGAACTCCA CCACCTGCCA AACATATGAC 75787 |||||| ||| ||||| |||| ||||||| | | || || ||| |||||| || ATCCTTCACA GCTTGTCCTT TATCAACATT GGCTACATGG CCGAGTGCTG AACATAATAC 239 TATCTTTCCT CTTATAACGG GATCAGTAAG TGACCCTGAT CTGCAATAAG GTGTTTCAAA 75727 |||||||||| |||||| | | | ||||| || ||| ||| | |||||||||| | ||||| | TATCTTTCCT CTTATAGCAG GGTCAGTGAG TGAACCTCGT CTGCAATAAG GGGTTTCGGA 299 TTCGTCACTT GCATTTTTTC CAGCATCAAA TAGAGCGAAG AATGTTGAGT TGGAAATCTT 75667 | || || ||||||||| |||||||||| ||||| |||| ||||||| || |||||||||| TGGATCTTTT GCATTTTTTG CAGCATCAAA TAGAGTGAAG AATGTTGCGT TGGAAATCTT 359 TGGACGATAA GCAGATTCTC CTTCAAATTC CTCTCCATTT CCAAGCTTAA CAGTAGCTTT 75607 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TGGACGATAA GCAGATTCTC CTTCAAATTC CTCTCCATTT CCAAGCGTAA CAGTAGCTTT 419 TAGCTTTCTA TCTTGAGTGC TAGCGCCTAC TGTAAGAATC CACGGGGCTT CATTTCCTAC 75547 || |||||| || | |||| | || ||||| ||||||||| || ||||| ||| || | TATCTTTCTG TCAAGCGTGC TGGCACCTAC CGTAAGAATC CAAGGGGCGG TGTTTACTGC 479 TGAGCCAGTA GAAGGACCAT TATTGCCGGC AGAGCAACTT ACAAGAATAC CTCTTTCTGT 75487 || | | || |||||| |||| || || ||| |||||| |||||||| | ||||||| || TGTGATAAAG GATGGACCAC TATTTCCAGC AGAACAACTT ACAAGAATTC CTCTTTCCGT 539 TGCACTATAT GCCCCAAGAG CAATAGGATT ACTATAGAAA TCACTCGAAC CACCTCCACC 75427 |||||| || ||||| | || ||||| | |||| |||| | | |||||||| TGCACTGTAC GCCCCGATAG CAATATTGTC TCTATGGAAA GGGATTG--- GACCTCCACT 596 AAGAGATATA GAAAGGATAT CTACGCCATC ATCTATAGCT GCATCCATAG CAGCTAA 75370 ||| || || ||||| |||| |||| ||||| |||||||||| | |||||| | ||||||| AAGGGACATT GAAAGAATAT CTACTCCATC ATCTATAGCT GAATCCATGG CAGCTAA 653 hqPGS_C08HBa0165B06.1-_SGN-E335107- (76025 75370) ******************************************************************************** EST sequence 58 -strand 578 n (File: SGN-E286017-) 1 CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 61 CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 121 CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 181 CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 241 TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 301 CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 361 TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 421 CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 481 GAGCAATACC ATCATCATGG AAAGGTTTTG TACTTCCACC AAGGGAGATT GAAAGAATAT 541 CTACACCATC ATCTATAGCT GCATAAATGG CAGCTAAA Predicted gene structure (within gDNA segment 77297 to 72612): Exon 1 75949 75370 ( 580 n); cDNA 1 577 ( 577 n); score: 0.788 MATCH C08HBa0165B06.1- SGN-E286017- 0.788 580 1.003 C PGS_C08HBa0165B06.1-_SGN-E286017- (75949 75370) Alignment (genomic DNA sequence = upper lines): CATCTGCATC AGAAATATCC AATGCTGGAA GCACATGAGC ATCGGCTGAT TTAGTGACAC 75890 |||| |||| |||| |||| ||||| |||| | |||||||| || | |||| ||||| |||| CATCAGCATT TGAAACATCC AATGCAGGAA GGACATGAGC TTCAGTTGAT TTAGTCACAC 60 CAGAACGCTG CTGGTTGATT ATAATCATGC CAACACCTCC AGCATCCTTT ACAGCTTGCC 75830 | || | ||||| | |||||||| |||||||||| |||||||||| || | ||| | CCTCTTCTTG TTCATTGATG AGAATCATGC CAACACCTCC AGCATCCTTT ACGGATTGTC 120 CTTTATCAAC CCTCGGAACT CCACCACCTG CCAAACATAT GACTATCTTT CCTCTTATAA 75770 ||| | |||| || ||| | || | |||||| | ||||||||| ||| | ||| CTTGAGCAAC TCTGAGAAGA CTTATACTTC GCAAACACAA GACTATCTTA CCTTTGATAG 180 CGGGATCAGT AAGTGACCCT GATCTGCAAT AAGGTGTTTC AAATTCGTCA CTTGCATTTT 75710 | || ||| | |||||| ||| | || ||| |||| | ||||| ||| ||| |||| | CAGGGTCATT AAGTGAGCCT GGACTACAAA AAGGCGCGCT AAATTGATCA CTTTCATTCT 240 TTCCAGCATC AAATAGAGCG AAGAATGTTG AGTTGGAAAT CTTTGGACGA TAAGCAGATT 75650 |||||||||| | |||||| | |||||||||| |||||||| | ||||||| || |||||||||| TTCCAGCATC ATATAGAGGG AAGAATGTTG AGTTGGAAGT CTTTGGATGA TAAGCAGATT 300 CTCCTTCAAA TTCCTCTCCA TTTCCAAGCT TAACAGTAGC TTTTAGCTTT CTATCTTGAG 75590 |||||||||| |||||| | | |||||||||| |||||||| | || || ||| ||||| |||| CTCCTTCAAA TTCCTCGCTA TTTCCAAGCT TAACAGTAAC CTTCAGTTTT CTATCATGAG 360 TGCTAGCGCC TACTGTAAGA ATCCACGGGG CTTCATTTCC TACTGAGCCA GTAGAAGGAC 75530 | || || || || || ||| |||||||||| ||||||| | ||| | |||| || |||| TACTGGCACC AACAGTGAGA ATCCACGGGG CTTCATTAGC TACAGTGCCA AGCGACGGAC 420 CATTATTGCC GGCAGAGCAA CTTACAAGAA TACCTCTTTC TGTTGCACTA TATGCCCCAA 75470 | ||||||| | ||| | ||||||| || |||||||||| ||||||||| || | ||| | CGCTATTGCC TGATGAGGCA CTTACAAAAA TACCTCTTTC TGTTGCACTG TACGTCCCGA 480 GAGCAATAGG ATTACTATAG AAATCACTCG AACCACCTCC ACCAAGAGAT ATAGAAAGGA 75410 |||||||| || | || | ||| | | || ||| |||||| || || ||||| | GAGCAATACC ATCATCATGG AAAGGTTTTG ---TACTTCC ACCAAGGGAG ATTGAAAGAA 537 TATCTACGCC ATCATCTATA GCTGCATCCA TAGCAGCTAA 75370 ||||||| || |||||||||| ||||||| | | |||||||| TATCTACACC ATCATCTATA GCTGCATAAA TGGCAGCTAA 577 hqPGS_C08HBa0165B06.1-_SGN-E286017- (75949 75370) ******************************************************************************** EST sequence 125 -strand 556 n (File: SGN-E208913-) 1 TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 61 TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 121 GACACCATAT TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC 181 TTGTCCTTTA TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTTTCCTCT 241 TATAGCAGGG TCAGTGAGTG ACCCTCGTCT GCAATAAGGG GTTTCAGATG GATCTTTTGC 301 ATTTTTTGCA GCATCAAATA GAGTGAAGAA TGTTGAGTTG GAAATCTTTG GACGATAAGC 361 AGATTCTCCT TCAAATTCCT CTCCATTTCC GAGCTTAGCA GTAGCTTTTA TCTTTCTATC 421 AAGCGTGCTG GCACCTACTG TAAGAATCCA AGGGGCTGAG TTATCTACTG AGGCAGGCGA 481 AGGACCATTA TTGCCTGCTG AGCAACTAAC AAGAATGCCT CTTTGTGTTG CACTGTACGC 541 CCCGAGAGCA ATACTT Predicted gene structure (within gDNA segment 79540 to 73365): Exon 1 76011 75462 ( 550 n); cDNA 1 553 ( 553 n); score: 0.840 MATCH C08HBa0165B06.1- SGN-E208913- 0.840 550 0.989 C PGS_C08HBa0165B06.1-_SGN-E208913- (76011 75462) Alignment (genomic DNA sequence = upper lines): TTGGAACGTG ATTGTAGCAA CAGGGTTCGA TGTTGAGTTC ATATAAGCAA GGATTTTTGT 75952 ||||| ||| |||||||||| |||||||||| | ||||||| |||| ||| | ||||| | TTGGATTGTG ATTGTAGCAA CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT 60 TCCATCTGCA TCAGAAATAT CC---AATGC TGGAAGCACA TGAGCATCGG CTGATTTAGT 75895 |||||||||| | |||| | || ||||| |||||| ||| |||||||| | |||||||||| TCCATCTGCA GCTGAAACAA CCAGAAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT 120 GACACCAGAA CGCTGCT-GG TTGATTATAA TCATGCCAAC ACCTCCAGCA TCCTTTACAG 75836 ||||||| | | || | || ||||| | || |||||||||| |||||||||| ||||| |||| GACACCATAT TG-TGATGGG TTGATGACAA TCATGCCAAC ACCTCCAGCA TCCTTCACAG 179 CTTGCCCTTT ATCAACCCTC GGAACTCCAC CACCTGCCAA ACATATGACT ATCTTTCCTC 75776 |||| ||||| |||||| | | || || | | ||| || ||||| ||| |||||||||| CTTGTCCTTT ATCAACATTG GCTACACCGC CGAATGCTAA ACATAATACT ATCTTTCCTC 239 TTATAACGGG ATCAGTAAGT GACCCTGATC TGCAATAAGG TGTTTCAAAT TCGTCACTTG 75716 ||||| | || ||||| ||| |||||| || |||||||||| |||||| || || ||| TTATAGCAGG GTCAGTGAGT GACCCTCGTC TGCAATAAGG GGTTTCAGAT GGATCTTTTG 299 CATTTTTTCC AGCATCAAAT AGAGCGAAGA ATGTTGAGTT GGAAATCTTT GGACGATAAG 75656 |||||||| | |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CATTTTTTGC AGCATCAAAT AGAGTGAAGA ATGTTGAGTT GGAAATCTTT GGACGATAAG 359 CAGATTCTCC TTCAAATTCC TCTCCATTTC CAAGCTTAAC AGTAGCTTTT AGCTTTCTAT 75596 |||||||||| |||||||||| |||||||||| | |||||| | |||||||||| | |||||||| CAGATTCTCC TTCAAATTCC TCTCCATTTC CGAGCTTAGC AGTAGCTTTT ATCTTTCTAT 419 CTTGAGTGCT AGCGCCTACT GTAAGAATCC ACGGGGCTTC ATTTCCTACT GAGCCAGTAG 75536 | | ||||| || |||||| |||||||||| | |||||| || ||||| ||| ||| | CAAGCGTGCT GGCACCTACT GTAAGAATCC AAGGGGCTGA GTTATCTACT GAGGCAGGCG 479 AAGGACCATT ATTGCCGGCA GAGCAACTTA CAAGAATACC TCTTTCTGTT GCACTATATG 75476 |||||||||| |||||| || |||||||| | ||||||| || ||||| |||| ||||| || | AAGGACCATT ATTGCCTGCT GAGCAACTAA CAAGAATGCC TCTTTGTGTT GCACTGTACG 539 CCCCAAGAGC AATA 75462 |||| ||||| |||| CCCCGAGAGC AATA 553 hqPGS_C08HBa0165B06.1-_SGN-E208913- (76011 75462) ******************************************************************************** EST sequence 126 -strand 435 n (File: SGN-E208810-) 1 CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 61 GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 121 ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 181 TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 241 GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 301 AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 361 GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 421 CCGAGAGCAA TACTT Predicted gene structure (within gDNA segment 78330 to 73365): Exon 1 75890 75462 ( 429 n); cDNA 1 432 ( 432 n); score: 0.819 MATCH C08HBa0165B06.1- SGN-E208810- 0.819 429 0.986 C PGS_C08HBa0165B06.1-_SGN-E208810- (75890 75462) Alignment (genomic DNA sequence = upper lines): CCAGAACGCT GCTGGTTGAT TATAATCATG C-CAACACCT CCAGCATCCT TTACAG-CTT 75833 ||| | | ||||||| | ||||||| | |||||||| ||||||||| | |||| || CCATATTGTG ATGGGTTGAT GACAATCATG CCCAACACCT GCAGCATCCT TAACAGGGTT 60 GCCCTTTATC AACCCTCGGA ACTCCACC-A CCTGCCAAAC ATATGACTAT CTTTCCTCTT 75774 | |||||||| ||| | | || || || | || |||| ||| ||||| ||||||| || GTCCTTTATC AACATTGGCT ACACCGCCGA ATGGCTAAAC ATAATACTAT CTTTCCTATT 120 ATAACGGGAT CAGTAAGTGA CCCTGATCTG CAATAAGGTG TTTCAAATTC GTCACTTGCA 75714 ||| | || | |||| ||||| |||| |||| |||||||| | ||||| || || ||||| ATAGCAGGGT CAGTGAGTGA CCCTCGTCTG CAATAAGGGG TTTCAGATGG ATCTTTTGCA 180 TTTTTTCCAG CATCAAATAG AGCGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 75654 |||||| ||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TTTTTTGCAG CATCAAATAG AGTGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA 240 GATTCTCCTT CAAATTCCTC TCCATTTCCA AGCTTAACAG TAGCTTTTAG CTTTCTATCT 75594 |||| ||||| |||||||||| ||||||||| |||||| ||| ||||||||| ||||||||| GATTGTCCTT CAAATTCCTC TCCATTTCCG AGCTTAGCAG TAGCTTTTAT CTTTCTATCA 300 TGAGTGCTAG CGCCTACTGT AAGAATCCAC GGGGCTTCAT TTCCTACTGA GCCAGTAGAA 75534 | ||||| | | |||||||| ||||||||| |||||| | | ||| ||| | ||| ||| AGCGTGCTGG CACCTACTGT AAGAATCCAA GGGGCTGAGT TATCTAGTGA GGCAGGCGAA 360 GGACCATTAT TGCCGGCAGA GCAACTTACA AGAATACCTC TTTCTGTTGC ACTATATGCC 75474 |||||||||| |||| || || |||||| ||| ||||| |||| ||| |||||| ||| || ||| GGACCATTAT TGCCTGCTGA GCAACTAACA AGAATGCCTC TTTGTGTTGC ACTGTACGCC 420 CCAAGAGCAA TA 75462 || ||||||| || CCGAGAGCAA TA 432 hqPGS_C08HBa0165B06.1-_SGN-E208810- (75890 75462) ******************************************************************************** EST sequence 21 -strand 617 n (File: SGN-E306389-) 1 GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 61 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 121 CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 181 TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 241 TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 301 TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 361 GCATCCTTCA CAGCTTGTCC TTTTACAACT TTAGAAACGA CACCTGGATA ACATATGACT 421 ATCTTTCCTT TTATTGCAGG GTCAGTGAGT GACCCTGGTT TGCAGTAAGG GGTTTTAGAT 481 GGATCACCTT TACCTTTTGA AGCATCATAC AGAGTGAAGA ATTTTGAGTC GGAAATCTGT 541 GGACGATAAG AAGCTTCCCC TTCAAATTCC TCTGTATTTC CAAGTGTAAC AGTAACTTTT 601 ATCTTTCTAT CAGTAGT Predicted gene structure (within gDNA segment 77358 to 70546): Exon 1 76208 75589 ( 620 n); cDNA 1 617 ( 617 n); score: 0.826 MATCH C08HBa0165B06.1- SGN-E306389- 0.826 620 1.005 C PGS_C08HBa0165B06.1-_SGN-E306389- (76208 75589) Alignment (genomic DNA sequence = upper lines): GACATTGATG TGCCTGATAT GATATTGAAT GTGGATTTGG TGTTTTTGTT ATCATCCACA 76149 ||||| || | ||| |||||| ||||||||| |||||||||| | |||||||| |||||||| GACATCGAGG TGCNTGATAT AATATTGAAT GTGGATTTGG TTTTTTTGTT GTCATCCACG 60 GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 76089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG 120 CCAATACTAG CTCCACTTGG TCCGCGAGAC GAAAATGCAG CTACTATGGG AGCATTTTTA 76029 ||| ||||| | | |||| ||||||||| ||||||| || | |||||||| ||| |||| | CCAGGACTAG GTTTATTTGG TCCGCGAGAA GAAAATGAAG CAACTATGGG AGCGTTTTCA 180 TCTCCAATTA TCGTTCCTTG GAACGTGATT GTAGCAACAG GGTTCGATGT TGAGTTCATA 75969 |||||||||| | |||||||| ||| |||||| |||| || |||| ||| | |||||| || TCTCCAATTA TTGTTCCTTG GAATGTGATT TTAGCTGTAG GGTTTGATAT TGAGTTTGTA 240 TAAGCAAGGA TTTTTGTTCC ATCTGCATCA GAAATATCCA ATGCTGGAAG CACATGAGCA 75909 |||| ||| | || | |||| ||||||| | |||| |||| | |||||||| ||||||||| TAAGTAAGAA TTCTGATTCC ATCTGCAGCT GAAACCTCCA AAGCTGGAAG AACATGAGCA 300 TCGGCTGATT TAGTGACACC AGAACGCTGC TGGTTGATTA TAATCATGCC AACACCTCCA 75849 || ||||||| | |||||||| | || ||||||| |||||| || |||||||||| TCAGCTGATT TTGTGACACC ATCTTCTGGC AGGTTGATGG CAATCATACC AACACCTCCA 360 GCATCCTTTA CAGCTTGCCC TTTATCAACC CTCGGAACTC CACCACCTGC CAAACATATG 75789 |||||||| | ||||||| || ||| ||| | | ||| | | |||||| |||||||| GCATCCTTCA CAGCTTGTCC TTTTACAA-C TTTAGAA-AC GA-CACCTGG ATAACATATG 417 ACTATCTTTC CTCTTATAAC GGGATCAGTA AGTGACCCTG ATCTGCAATA AGGTGTTTCA 75729 |||||||||| || |||| | || ||||| |||||||||| | |||| || ||| |||| | ACTATCTTTC CTTTTATTGC AGGGTCAGTG AGTGACCCTG GTTTGCAGTA AGGGGTTTTA 477 AATTCGTCAC TTGCATTTTT TCCAGCATCA AATAGAGCGA AGAATGTTGA GTTGGAAATC 75669 || |||| | | ||| | ||||||| | |||| || ||||| |||| || ||||||| GATGGATCAC CTTTACCTTT TGAAGCATCA TACAGAGTGA AGAATTTTGA GTCGGAAATC 537 TTTGGACGAT AAGCAGATTC TCCTTCAAAT TCCTCTCCAT TTCCAAGCTT AACAGTAGCT 75609 | |||||||| ||| || ||| ||||||||| |||||| || ||||||| | ||||||| || TGTGGACGAT AAGAAGCTTC CCCTTCAAAT TCCTCTGTAT TTCCAAGTGT AACAGTAACT 597 TTTAGCTTTC TATCTTGAGT 75589 |||| ||||| |||| ||| TTTATCTTTC TATCAGTAGT 617 hqPGS_C08HBa0165B06.1-_SGN-E306389- (76208 75589) ******************************************************************************** EST sequence 115 -strand 494 n (File: SGN-E210009-) 1 CAATTATGTC AGGTTTCAAG ATCCCAGGAT TAGGTTTACT TGGTCCGCGA GAAGAAAATG 61 CAGCAACTAT TGGAGCATTT TTATCTCCAA TTACTGTTCC TTGGATTGTG ATTGTAGCAA 121 CAGGGTTCGA TATTGAGTTT GTATAGGCAC GAATTTTGCT TCCATCTGCA GCTGAAACAA 181 CCAATGCTGG AAGAACATGA GCATCAGCTG ATTTAGTGAC ACCATATTGT GATGGGTTGA 241 TGACAATCAT GCCAACACCT CCAGCATCCT TCACAGCTTG TCCTTTATCA ACATTGGCTA 301 CACCGCCGAA TGCTAAACAT AATACTATCT TTCCTCTTAT AGCAGGGTCA GTGAGTGACC 361 CTCGTCTGCA ATAAGGGGTT TCAGATGGAT CTTTTGCATT TTTTGCAGCA TCAAATAGAG 421 TGAAGAATGT TGAGTTGGAA ATCTTTGGAC GATAAGCAGA TTCTCCTTCA AATTCCTCTC 481 CATTTCCGAG CTTA Predicted gene structure (within gDNA segment 77360 to 74955): Exon 1 76109 75618 ( 492 n); cDNA 3 494 ( 492 n); score: 0.861 MATCH C08HBa0165B06.1- SGN-E210009- 0.861 492 0.996 C PGS_C08HBa0165B06.1-_SGN-E210009- (76109 75618) Alignment (genomic DNA sequence = upper lines): ATTATGTCAG GTTTCAAGAT GCCAATACTA GCTCCACTTG GTCCGCGAGA CGAAAATGCA 76050 |||||||||| |||||||||| ||| | || | | ||||| |||||||||| ||||||||| ATTATGTCAG GTTTCAAGAT CCCAGGATTA GGTTTACTTG GTCCGCGAGA AGAAAATGCA 62 GCTACTATGG GAGCATTTTT ATCTCCAATT ATCGTTCCTT GGAACGTGAT TGTAGCAACA 75990 || ||||| | |||||||||| |||||||||| | ||||||| ||| ||||| |||||||||| GCAACTATTG GAGCATTTTT ATCTCCAATT ACTGTTCCTT GGATTGTGAT TGTAGCAACA 122 GGGTTCGATG TTGAGTTCAT ATAAGCAAGG ATTTTTGTTC CATCTGCATC AGAAATATCC 75930 ||||||||| ||||||| | ||| ||| | ||||| ||| |||||||| | |||| | || GGGTTCGATA TTGAGTTTGT ATAGGCACGA ATTTTGCTTC CATCTGCAGC TGAAACAACC 182 AATGCTGGAA GCACATGAGC ATCGGCTGAT TTAGTGACAC CAGAACGCTG CT-GGTTGAT 75871 |||||||||| | |||||||| ||| |||||| |||||||||| || | | || | ||||||| AATGCTGGAA GAACATGAGC ATCAGCTGAT TTAGTGACAC CATATTG-TG ATGGGTTGAT 241 TATAATCATG CCAACACCTC CAGCATCCTT TACAGCTTGC CCTTTATCAA CCCTCGGAAC 75811 | ||||||| |||||||||| |||||||||| |||||||| |||||||||| | | | || GACAATCATG CCAACACCTC CAGCATCCTT CACAGCTTGT CCTTTATCAA CATTGGCTAC 301 TCCACCACCT GCCAAACATA TGACTATCTT TCCTCTTATA ACGGGATCAG TAAGTGACCC 75751 || || | || ||||||| |||||||| |||||||||| | || |||| | |||||||| ACCGCCGAAT GCTAAACATA ATACTATCTT TCCTCTTATA GCAGGGTCAG TGAGTGACCC 361 TGATCTGCAA TAAGGTGTTT CAAATTCGTC ACTTGCATTT TTTCCAGCAT CAAATAGAGC 75691 | ||||||| ||||| |||| || || || |||||||| ||| |||||| ||||||||| TCGTCTGCAA TAAGGGGTTT CAGATGGATC TTTTGCATTT TTTGCAGCAT CAAATAGAGT 421 GAAGAATGTT GAGTTGGAAA TCTTTGGACG ATAAGCAGAT TCTCCTTCAA ATTCCTCTCC 75631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAATGTT GAGTTGGAAA TCTTTGGACG ATAAGCAGAT TCTCCTTCAA ATTCCTCTCC 481 ATTTCCAAGC TTA 75618 |||||| ||| ||| ATTTCCGAGC TTA 494 hqPGS_C08HBa0165B06.1-_SGN-E210009- (76109 75618) ******************************************************************************** EST sequence 110 -strand 663 n (File: SGN-E397025-) 1 AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 61 CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 121 GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 181 AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 241 TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 301 AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 361 AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 421 TGATGGGTTG ATGATAATCA TGCCAACACC TCCAGCATCC TTCACAGCTT GTCCTTTATC 481 AACATTGGCT ACATGGCCGA GTGCTGAACA TAATACTATC TTTCCTCTTA TAGCAGGGTC 541 AGTGAGTGAA CCTCGTCTGC AATAAGGGGT TTCGGATGGA TCTTTTGCAT TTTTTGCAGC 601 ATCAAATAGA GTGAAGAATG TTGCGTTGGA AATCTTTGGA CGATAAGCAG ATTCTCCTTC 661 AAA Predicted gene structure (within gDNA segment 76948 to 75040): Exon 1 76302 75640 ( 663 n); cDNA 1 663 ( 663 n); score: 0.874 MATCH C08HBa0165B06.1- SGN-E397025- 0.874 663 1.000 C PGS_C08HBa0165B06.1-_SGN-E397025- (76302 75640) Alignment (genomic DNA sequence = upper lines): AGCTGTTGTC ATCATTGCAG ACTTAATAGC AGCAGGAGAC CAATCAGGAT GTGTGCTCTT 76243 ||| |||||| |||||||||| | |||||| | |||||||||| |||||||||| |||||| || AGCCGTTGTC ATCATTGCAG ATTTAATAAC AGCAGGAGAC CAATCAGGAT GTGTGCATTT 60 CAGCAGAGCA GCTACGCCAC TAAGGTGAGG GCAAGACATT GATGTGCCTG ATATGATATT 76183 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CAGCAGAGCT GCTACGCCAC TAAGGTGAGG GCAAGACATT GAGGTGCCTG ATATGATATT 120 GAATGTGGAT TTGGTGTTTT TGTTATCATC CACAGAGGTA GGCCAAGCAG CAAGGATATT 76123 |||||||||| |||||||| | |||| ||||| ||| |||||| |||||||||| |||||||||| GAATGTGGAT TTGGTGTTCT TGTTGTCATC CACGGAGGTA GGCCAAGCAG CAAGGATATT 180 AACACCAGGA CCGATTATGT CAGGTTTCAA GATGCCAATA CTAGCTCCAC TTGGTCCGCG 76063 | |||||||| |||||||||| |||| ||||| ||| ||| | ||||||| || ||||||| | AGCACCAGGA CCGATTATGT CAGGCTTCAA GATTCCAGGA CTAGCTCTAC TTGGTCCTCT 240 AGACGAAAAT GCAGCTACTA TGGGAGCATT TTTATCTCCA ATTATCGTTC CTTGGAACGT 76003 || |||||| ||||| || | | |||||||| ||| |||||| ||||| |||| ||||||| | TGAGGAAAAT GCAGCAACCA TAGGAGCATT TTTGTCTCCA ATTATTGTTC CTTGGAATGC 300 GATTGTAGCA ACAGGGTTCG ATGTTGAGTT CATATAAGCA AGGATTTTTG TTCCATCTGC 75943 ||||||||| |||||| | | |||||||||| ||| |||||| || ||||||| |||| ||||| AATTGTAGCA ACAGGGCTTG ATGTTGAGTT CATGTAAGCA AGAATTTTTG TTCCGTCTGC 360 ATCAGAAATA TCCAATGCTG GAAGCACATG AGCATCGGCT GATTTAGTGA CACCAGAACG 75883 | | |||| | ||||||||| |||| ||||| |||||| ||| |||||||||| ||||| | | AGCTGAAACA ACCAATGCTG GAAGAACATG AGCATCAGCT GATTTAGTGA CACCATATTG 420 CTGCT-GGTT GATTATAATC ATGCCAACAC CTCCAGCATC CTTTACAGCT TGCCCTTTAT 75824 || | |||| ||| |||||| |||||||||| |||||||||| ||| |||||| || ||||||| -TGATGGGTT GATGATAATC ATGCCAACAC CTCCAGCATC CTTCACAGCT TGTCCTTTAT 479 CAACCCTCGG AACTCCACCA CCTGCCAAAC ATATGACTAT CTTTCCTCTT ATAACGGGAT 75764 |||| | | || || ||| ||| ||| ||||| |||||||||| ||| | || | CAACATTGGC TACATGGCCG AGTGCTGAAC ATAATACTAT CTTTCCTCTT ATAGCAGGGT 539 CAGTAAGTGA CCCTGATCTG CAATAAGGTG TTTCAAATTC GTCACTTGCA TTTTTTCCAG 75704 |||| ||||| ||| |||| |||||||| | |||| || || ||||| |||||| ||| CAGTGAGTGA ACCTCGTCTG CAATAAGGGG TTTCGGATGG ATCTTTTGCA TTTTTTGCAG 599 CATCAAATAG AGCGAAGAAT GTTGAGTTGG AAATCTTTGG ACGATAAGCA GATTCTCCTT 75644 |||||||||| || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CATCAAATAG AGTGAAGAAT GTTGCGTTGG AAATCTTTGG ACGATAAGCA GATTCTCCTT 659 CAAA 75640 |||| CAAA 663 hqPGS_C08HBa0165B06.1-_SGN-E397025- (76302 75640) ******************************************************************************** EST sequence 72 -strand 605 n (File: SGN-E308535-) 1 ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 61 AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 121 GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 181 ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 241 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 301 GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 361 TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 421 CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 481 CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 541 CCTTTTACAA CCTTAGAAAC GACACCTGGA TAACATATGA CTATCTTTCC TTTTATTGCA 601 GGGTC Predicted gene structure (within gDNA segment 77709 to 72286): Exon 1 76370 75763 ( 608 n); cDNA 1 605 ( 605 n); score: 0.859 MATCH C08HBa0165B06.1- SGN-E308535- 0.859 608 1.005 C PGS_C08HBa0165B06.1-_SGN-E308535- (76370 75763) Alignment (genomic DNA sequence = upper lines): ATTGCATAAA TGTCAGCAGG AAGGAGCCTT TCGTCTAGTA TTGGACTGTT GGCTAGGTTT 76311 |||||| | | |||| ||||| ||| | | || || ||||||| ||||||| | ||| |||||| ATTGCAAAGA TGTCTGCAGG AAGTAACTTT TCATCTAGTA TTGGACTACT GGCAAGGTTT 60 AATGTGTCAG CTGTTGTCAT CATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 76251 || |||| || | |||||||| ||||||||| |||||||||| |||||||||| |||||||||| AAAGTGTAAG CGGTTGTCAT GATTGCAGAC TTAATAGCAG CAGGAGACCA ATCAGGATGT 120 GTGCTCTTCA GCAGAGCAGC TACGCCACTA AGGTGAGGGC AAGACATTGA TGTGCCTGAT 76191 |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || ||||||||| GTGCTCTTCA GCAGAGCTGC TACGCCACTA AGGTGAGGGC AAGACATCGA GGTGCCTGAT 180 ATGATATTGA ATGTGGATTT GGTGTTTTTG TTATCATCCA CAGAGGTAGG CCAAGCAGCA 76131 || ||||||| |||||||||| ||| |||||| || ||||||| | |||||||| |||||||||| ATAATATTGA ATGTGGATTT GGTTTTTTTG TTGTCATCCA CGGAGGTAGG CCAAGCAGCA 240 AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAATACT AGCTCCACTT 76071 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| || | | || AGGATATTAA CACCAGGACC GATTATGTCA GGTTTCAAGA TGCCAGGACT AGGTTTATTT 300 GGTCCGCGAG ACGAAAATGC AGCTACTATG GGAGCATTTT TATCTCCAAT TATCGTTCCT 76011 |||||||||| | ||||||| ||| |||||| ||||| |||| ||||||||| ||| |||||| GGTCCGCGAG AAGAAAATGA AGCAACTATG GGAGCGTTTT CATCTCCAAT TATTGTTCCT 360 TGGAACGTGA TTGTAGCAAC AGGGTTCGAT GTTGAGTTCA TATAAGCAAG GATTTTTGTT 75951 ||||| |||| || |||| |||||| ||| ||||||| |||||| ||| ||| | || TGGAATGTGA TTTTAGCTGT AGGGTTTGAT ATTGAGTTTG TATAAGTAAG AATTCTGATT 420 CCATCTGCAT CAGAAATATC CAATGCTGGA AGCACATGAG CATCGGCTGA TTTAGTGACA 75891 ||||||||| | |||| || ||| |||||| || ||||||| |||| ||||| ||| |||||| CCATCTGCAG CTGAAACCTC CAAAGCTGGA AGAACATGAG CATCAGCTGA TTTTGTGACA 480 CCAGAACGCT GCTGGTTGAT TATAATCATG CCAACACCTC CAGCATCCTT TACAGCTTGC 75831 ||| || ||||||| |||||| |||||||||| |||||||||| |||||||| CCATCTTCTG GCAGGTTGAT GGCAATCATA CCAACACCTC CAGCATCCTT CACAGCTTGT 540 CCTTTATCAA CCCTCGGAAC TCCACCACCT GCCAAACATA TGACTATCTT TCCTCTTATA 75771 ||||| ||| ||| ||| | | ||||| | |||||| |||||||||| |||| |||| CCTTTTACAA -CCTTAGAA- ACGA-CACCT GGATAACATA TGACTATCTT TCCTTTTATT 597 ACGGGATC 75763 | || || GCAGGGTC 605 hqPGS_C08HBa0165B06.1-_SGN-E308535- (76370 75763) ******************************************************************************** EST sequence 65 -strand 362 n (File: SGN-E200689-) 1 CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 61 GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 121 ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 181 ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 241 TTAGTGACAC CATATTGTGA TGGGTTGATG ACAATCATGC CAACACCTCC AGCATCCTTC 301 ACAGCTTGTC CTTTATCAAC ATTGGCTACA CCGCCGAATG CTAAACATAA TACTATCTTT 361 CC Predicted gene structure (within gDNA segment 76830 to 73351): Exon 1 76139 75778 ( 362 n); cDNA 1 362 ( 362 n); score: 0.849 MATCH C08HBa0165B06.1- SGN-E200689- 0.849 362 1.000 C PGS_C08HBa0165B06.1-_SGN-E200689- (76139 75778) Alignment (genomic DNA sequence = upper lines): CAAGCAGCAA GGATATTAAC ACCAGGACCG ATTATGTCAG GTTTCAAGAT GCCAATACTA 76080 |||||||| | |||||||||| ||||||||| |||||||||| |||||||||| ||| | || CAAGCAGCGA GGATATTAAC ACCAGGACCA ATTATGTCAG GTTTCAAGAT CCCAGGATTA 60 GCTCCACTTG GTCCGCGAGA CGAAAATGCA GCTACTATGG GAGCATTTTT ATCTCCAATT 76020 | | ||||| |||||||||| ||||||||| || ||||| | |||||||||| |||||||||| GGTTTACTTG GTCCGCGAGA AGAAAATGCA GCAACTATTG GAGCATTTTT ATCTCCAATT 120 ATCGTTCCTT GGAACGTGAT TGTAGCAACA GGGTTCGATG TTGAGTTCAT ATAAGCAAGG 75960 | ||||||| ||| ||||| |||||||||| ||||||||| ||||||| | ||| ||| | ACTGTTCCTT GGATTGTGAT TGTAGCAACA GGGTTCGATA TTGAGTTTGT ATAGGCACGA 180 ATTTTTGTTC CATCTGCATC AGAAATATCC AATGCTGGAA GCACATGAGC ATCGGCTGAT 75900 ||||| ||| |||||||| | |||| | || |||||||||| | |||||||| ||| |||||| ATTTTGCTTC CATCTGCAGC TGAAACAACC AATGCTGGAA GAACATGAGC ATCAGCTGAT 240 TTAGTGACAC CAGAACGCTG CT-GGTTGAT TATAATCATG CCAACACCTC CAGCATCCTT 75841 |||||||||| || | | || | ||||||| | ||||||| |||||||||| |||||||||| TTAGTGACAC CATATTG-TG ATGGGTTGAT GACAATCATG CCAACACCTC CAGCATCCTT 299 TACAGCTTGC CCTTTATCAA CCCTCGGAAC TCCACCACCT GCCAAACATA TGACTATCTT 75781 |||||||| |||||||||| | | | || || || | || ||||||| |||||||| CACAGCTTGT CCTTTATCAA CATTGGCTAC ACCGCCGAAT GCTAAACATA ATACTATCTT 359 TCC 75778 ||| TCC 362 hqPGS_C08HBa0165B06.1-_SGN-E200689- (76139 75778) ******************************************************************************** EST sequence 30 -strand 704 n (File: SGN-E212584-) 1 ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 61 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 121 TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 181 TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 241 TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 301 TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 361 TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 421 CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 481 GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 541 GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 601 TGTGATGGGT TGATGACAAT CATGCCAACA CCTCCAGCAT CCTTCACAGC TTGTCCTTTA 661 TCAACATTGG CTACACCGCC GAATGCTAAA CATAATACTA TCTT Predicted gene structure (within gDNA segment 77157 to 73381): Exon 1 76484 75781 ( 704 n); cDNA 1 704 ( 704 n); score: 0.884 MATCH C08HBa0165B06.1- SGN-E212584- 0.884 704 1.000 C PGS_C08HBa0165B06.1-_SGN-E212584- (76484 75781) Alignment (genomic DNA sequence = upper lines): ACCTGCCGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA 76425 ||||| ||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||| ACCTGTGGAT TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAATCCTC AAATGGGGTA 60 TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCGATTGCA 76365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TCATAAACTA GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCTATTGCA 120 TAAATGTCAG CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TGTTGGCTAG GTTTAATGTG 76305 || || |||| ||||| |||| ||||| ||| |||||||||| | |||| || |||||||||| TAGATATCAG CAGGACGGAG CCTTTGGTCG AGTATTGGAC TACTGGCAAG GTTTAATGTG 180 TCAGCTGTTG TCATCATTGC AGACTTAATA GCAGCAGGAG ACCAATCAGG ATGTGTGCTC 76245 ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| |||||| ||| TCAGCGGTTG TCATCATTGC AGACTTAATA ACAGCAGGAG ACCAATCAGG ATGTGTTCTC 240 TTCAGCAGAG CAGCTACGCC ACTAAGGTGA GGGCAAGACA TTGATGTGCC TGATATGATA 76185 |||||||||| | ||||| || ||||||||| |||||||||| | || ||||| |||||| ||| TTCAGCAGAG CTGCTACCCC ACTAAGGTGT GGGCAAGACA TCGAGGTGCC TGATATAATA 300 TTGAATGTGG ATTTGGTGTT TTTGTTATCA TCCACAGAGG TAGGCCAAGC AGCAAGGATA 76125 |||||||||| ||||||||| ||||| ||| |||||||| | |||||||||| ||| |||||| TTGAATGTGG ATTTGGTGTC CTTGTTGTCA TCCACAGAAG TAGGCCAAGC AGCGAGGATA 360 TTAACACCAG GACCGATTAT GTCAGGTTTC AAGATGCCAA TACTAGCTCC ACTTGGTCCG 76065 |||||||||| |||| ||||| |||||||||| ||||| ||| | ||| | |||||||||| TTAACACCAG GACCAATTAT GTCAGGTTTC AAGATCCCAG GATTAGGTTT ACTTGGTCCG 420 CGAGACGAAA ATGCAGCTAC TATGGGAGCA TTTTTATCTC CAATTATCGT TCCTTGGAAC 76005 ||||| |||| ||||||| || ||| |||||| |||||||||| |||||| || |||||||| CGAGAAGAAA ATGCAGCAAC TATTGGAGCA TTTTTATCTC CAATTACTGT TCCTTGGATT 480 GTGATTGTAG CAACAGGGTT CGATGTTGAG TTCATATAAG CAAGGATTTT TGTTCCATCT 75945 |||||||||| |||||||||| |||| ||||| || |||| | || | ||||| |||||||| GTGATTGTAG CAACAGGGTT CGATATTGAG TTTGTATAGG CACGAATTTT GCTTCCATCT 540 GCATCAGAAA TATCCAATGC TGGAAGCACA TGAGCATCGG CTGATTTAGT GACACCAGAA 75885 ||| | |||| | ||||||| |||||| ||| |||||||| | |||||||||| ||||||| | GCAGCTGAAA CAACCAATGC TGGAAGAACA TGAGCATCAG CTGATTTAGT GACACCATAT 600 CGCTGCT-GG TTGATTATAA TCATGCCAAC ACCTCCAGCA TCCTTTACAG CTTGCCCTTT 75826 | || | || ||||| | || |||||||||| |||||||||| ||||| |||| |||| ||||| TG-TGATGGG TTGATGACAA TCATGCCAAC ACCTCCAGCA TCCTTCACAG CTTGTCCTTT 659 ATCAACCCTC GGAACTCCAC CACCTGCCAA ACATATGACT ATCTT 75781 |||||| | | || || | | ||| || ||||| ||| ||||| ATCAACATTG GCTACACCGC CGAATGCTAA ACATAATACT ATCTT 704 hqPGS_C08HBa0165B06.1-_SGN-E212584- (76484 75781) ******************************************************************************** EST sequence 48 -strand 592 n (File: SGN-E329031-) 1 ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 61 TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 121 CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 181 TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 241 GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 301 TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 361 TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 421 CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 481 AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 541 CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT Predicted gene structure (within gDNA segment 77246 to 73186): Exon 1 76456 75865 ( 592 n); cDNA 1 592 ( 592 n); score: 0.858 MATCH C08HBa0165B06.1- SGN-E329031- 0.858 592 1.000 C PGS_C08HBa0165B06.1-_SGN-E329031- (76456 75865) Alignment (genomic DNA sequence = upper lines): ATAAATAAGG TACATAGTCC TCGAATGGTG TATCATAAAC TAGTCCTGGA TCATTTGCCC 76397 |||||||||| | ||||| |||||||||| |||||||||| |||||||||| ||| | | | ATAAATAAGG AATGTAGTCT TCGAATGGTG TATCATAAAC TAGTCCTGGA TCACTGNCTC 60 TCGATGGATT AACATGTCCT GCACCGATTG CATAAATGTC AGCAGGAAGG AGCCTTTCGT 76337 |||||||||| |||||||||| ||||| |||| || | | || ||||| || | |||||||||| TCGATGGATT AACATGTCCT GCACCCATTG CAAAGAGATC AGCAGAAATG AGCCTTTCGT 120 CTAGTATTGG ACTGTTGGCT AGGTTTAATG TGTCAGCTGT TGTCATCATT GCAGACTTAA 76277 | |||||||| ||||||||| ||||||| || |||||||||| |||||||||| || ||||||| CCAGTATTGG ACTGTTGGCG AGGTTTACTG TGTCAGCTGT TGTCATCATT GCTGACTTAA 180 TAGCAGCAGG AGACCAATCA GGATGTGTGC TCTTCAGCAG AGCAGCTACG CCACTAAGGT 76217 |||| ||||| |||||||||| ||||||| || |||||||||| ||| || || |||||||||| TAGCTGCAGG AGACCAATCA GGATGTGCGC TCTTCAGCAG AGCTGCAACA CCACTAAGGT 240 GAGGGCAAGA CATTGATGTG CCTGATATGA TATTGAATGT GGATTTGGTG TTTTTGTTAT 76157 |||||||||| |||||| || || |||| | |||||||||| ||||| ||| |||||||| | GAGGGCAAGA CATTGAGGTT CCGGATACTA TATTGAATGT TGATTTTGTG TTTTTGTTGT 300 CATCCACAGA GGTAGGCCAA GCAGCAAGGA TATTAACACC AGGACCGATT ATGTCAGGTT 76097 |||||| || |||||||||| |||||||||| |||||||| |||||||||| |||||||||| TATCCACGGA GGTAGGCCAA GCAGCAAGGA CGTTAACACC AGGACCGATT ATGTCAGGTT 360 TCAAGATGCC AATACTAGCT CCACTTGGTC CGCGAGACGA AAATGCAGCT ACTATGGGAG 76037 | |||||||| | ||| ||| | ||||||| | || || || ||||| ||| ||||| |||| TTAAGATGCC AGGACTTGCT ACGCTTGGTC CTCGTGAGGA AAATGAAGCA ACTATAGGAG 420 CATTTTTATC TCCAATTATC GTTCCTTGGA ACGTGATTGT AGCAACAGGG TTCGATGTTG 75977 ||||||| || |||||||| ||||| |||| | ||||||| |||||| || || || | || CATTTTTGTC TCCAATTACA GTTCCATGGA AGGTGATTGA AGCAACCGGA TTTGAAGATG 480 AGTTCATATA AGCAAGGATT TTTGTTCCAT CTGCATCAGA AATATCCAAT GCTGGAAGCA 75917 |||||||||| ||||| ||| || |||||| | |||| || || ||||||| || ||||| | AGTTCATATA GGCAAGAATT TTCTTTCCAT CAGCATTTGA AACATCCAAT GCAGGAAGGA 540 CATGAGCATC GGCTGATTTA GTGACACCAG AACGCTGCTG GTTGATTATA AT 75865 ||||||| || ||||||||| || ||||| || | ||||| | | || CATGAGCTTC AGCTGATTTA GTCACACCCT CTTCTTGTTC ATTGATGAGA AT 592 hqPGS_C08HBa0165B06.1-_SGN-E329031- (76456 75865) ******************************************************************************** EST sequence 35 -strand 708 n (File: SGN-E213673-) 1 AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 61 TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 121 ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 181 GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 241 TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 301 TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 361 TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 421 AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 481 GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 541 TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 601 GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 661 ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA Predicted gene structure (within gDNA segment 77308 to 74581): Exon 1 76608 75901 ( 708 n); cDNA 1 708 ( 708 n); score: 0.894 MATCH C08HBa0165B06.1- SGN-E213673- 0.894 708 1.000 C PGS_C08HBa0165B06.1-_SGN-E213673- (76608 75901) Alignment (genomic DNA sequence = upper lines): AGTTCTGGTA TATGTCTGAG GAGTTGATCC AAGGTCGTAT ATGGAAAACG AAGGATAGTT 76549 ||||||||| |||||||||| |||||||||| ||| || ||| ||| |||||||||| AGTTCTGGTG TATGTCTGAG GAGTTGATCC AAGTCTCGAT ATGCAAATGA AAGGATAGTT 60 TAATTGTGCT TCAAGAATAC TTTTCACCTC CGAGCAATTC ACCTTGCGTT GTAACAGGTT 76489 |||||||||| ||| | |||| ||| ||||| |||||||||| ||| ||||| |||||| || TAATTGTGCT TCAGGGATAC TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT 120 ACCTACCTGC CGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAGT CCTCGAATGG 76429 ||||||||| ||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| ACCTACCTGT GGATTTGTGT AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG 180 TGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCGAT 76369 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || GGTATCATAA ACTAGTCCTG GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT 240 TGCATAAATG TCAGCAGGAA GGAGCCTTTC GTCTAGTATT GGACTGTTGG CTAGGTTTAA 76309 |||||| || ||||||||| ||||||||| ||| |||||| ||||| ||| | |||||||| TGCATAGATA TCAGCAGGAC GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA 300 TGTGTCAGCT GTTGTCATCA TTGCAGACTT AATAGCAGCA GGAGACCAAT CAGGATGTGT 76249 ||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TGTGTCAGCG GTTGTCATCA TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT 360 GCTCTTCAGC AGAGCAGCTA CGCCACTAAG GTGAGGGCAA GACATTGATG TGCCTGATAT 76189 ||||||||| ||||| |||| | |||||||| ||| |||||| ||||| || | |||||||||| TCTCTTCAGC AGAGCTGCTA CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT 420 GATATTGAAT GTGGATTTGG TGTTTTTGTT ATCATCCACA GAGGTAGGCC AAGCAGCAAG 76129 ||||||||| |||||||||| ||| ||||| ||||||||| || ||||||| ||||||| || AATATTGAAT GTGGATTTGG TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG 480 GATATTAACA CCAGGACCGA TTATGTCAGG TTTCAAGATG CCAATACTAG CTCCACTTGG 76069 |||||||||| |||||||| | |||||||||| ||||||||| ||| | ||| | |||||| GATATTAACA CCAGGACCAA TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG 540 TCCGCGAGAC GAAAATGCAG CTACTATGGG AGCATTTTTA TCTCCAATTA TCGTTCCTTG 76009 ||||||||| |||||||||| | ||||| || |||||||||| |||||||||| |||||||| TCCGCGAGAA GAAAATGCAG CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG 600 GAACGTGATT GTAGCAACAG GGTTCGATGT TGAGTTCATA TAAGCAAGGA TTTTTGTTCC 75949 || |||||| |||||||||| |||||||| | |||||| || || ||| | | |||| |||| GATTGTGATT GTAGCAACAG GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTTGCTTCC 660 ATCTGCATCA GAAATATCCA ATGCTGGAAG CACATGAGCA TCGGCTGA 75901 ||||||| | |||| | ||| |||||||||| ||||||||| || ||||| ATCTGCAGCT GAAACAACCA ATGCTGGAAG AACATGAGCA TCAGCTGA 708 hqPGS_C08HBa0165B06.1-_SGN-E213673- (76608 75901) ******************************************************************************** EST sequence 25 -strand 634 n (File: SGN-E213088-) 1 GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 61 TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 121 AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 181 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 241 GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 301 TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 361 CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 421 TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 481 TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 541 CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 601 GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT Predicted gene structure (within gDNA segment 77459 to 75121): Exon 1 76588 75955 ( 634 n); cDNA 1 634 ( 634 n); score: 0.899 MATCH C08HBa0165B06.1- SGN-E213088- 0.899 634 1.000 C PGS_C08HBa0165B06.1-_SGN-E213088- (76588 75955) Alignment (genomic DNA sequence = upper lines): GAGTTGATCC AAGGTCGTAT ATGGAAAACG AAGGATAGTT TAATTGTGCT TCAAGAATAC 76529 |||||||||| ||| || ||| |||| | |||||||||| |||||||||| ||| | |||| GAGTTGATCC AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC 60 TTTTCACCTC CGAGCAATTC ACCTTGCGTT GTAACAGGTT ACCTACCTGC CGATTTGTGT 76469 ||| ||||| |||||||||| ||| ||||| |||||| || ||||||||| ||||||||| TTTCAACCTC CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT 120 AGTTCAAACC ACATAAATAA GGTACATAGT CCTCGAATGG TGTATCATAA ACTAGTCCTG 76409 |||||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| AGTTCAAACC ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG 180 GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCGAT TGCATAAATG TCAGCAGGAA 76349 |||||||||| |||||||||| |||||||||| ||||||| || |||||| || ||||||||| GATCATTTGC CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC 240 GGAGCCTTTC GTCTAGTATT GGACTGTTGG CTAGGTTTAA TGTGTCAGCT GTTGTCATCA 76289 ||||||||| ||| |||||| ||||| ||| | |||||||| ||||||||| |||||||||| GGAGCCTTTG GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA 300 TTGCAGACTT AATAGCAGCA GGAGACCAAT CAGGATGTGT GCTCTTCAGC AGAGCAGCTA 76229 |||||||||| |||| ||||| |||||||||| |||||||||| ||||||||| ||||| |||| TTGCAGACTT AATAACAGCA GGAGACCAAT CAGGATGTGT TCTCTTCAGC AGAGCTGCTA 360 CGCCACTAAG GTGAGGGCAA GACATTGATG TGCCTGATAT GATATTGAAT GTGGATTTGG 76169 | |||||||| ||| |||||| ||||| || | |||||||||| ||||||||| |||||||||| CCCCACTAAG GTGTGGGCAA GACATCGAGG TGCCTGATAT AATATTGAAT GTGGATTTGG 420 TGTTTTTGTT ATCATCCACA GAGGTAGGCC AAGCAGCAAG GATATTAACA CCAGGACCGA 76109 ||| ||||| ||||||||| || ||||||| ||||||| || |||||||||| |||||||| | TGTCCTTGTT GTCATCCACA GAAGTAGGCC AAGCAGCGAG GATATTAACA CCAGGACCAA 480 TTATGTCAGG TTTCAAGATG CCAATACTAG CTCCACTTGG TCCGCGAGAC GAAAATGCAG 76049 |||||||||| ||||||||| ||| | ||| | |||||| ||||||||| |||||||||| TTATGTCAGG TTTCAAGATC CCAGGATTAG GTTTACTTGG TCCGCGAGAA GAAAATGCAG 540 CTACTATGGG AGCATTTTTA TCTCCAATTA TCGTTCCTTG GAACGTGATT GTAGCAACAG 75989 | ||||| || |||||||||| |||||||||| |||||||| || |||||| |||||||||| CAACTATTGG AGCATTTTTA TCTCCAATTA CTGTTCCTTG GATTGTGATT GTAGCAACAG 600 GGTTCGATGT TGAGTTCATA TAAGCAAGGA TTTT 75955 |||||||| | |||||| || || ||| | | |||| GGTTCGATAT TGAGTTTGTA TAGGCACGAA TTTT 634 hqPGS_C08HBa0165B06.1-_SGN-E213088- (76588 75955) ******************************************************************************** EST sequence 129 -strand 409 n (File: SGN-E317658-) 1 AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 61 CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 121 TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 181 TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 241 GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 301 GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 361 CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC Predicted gene structure (within gDNA segment 77043 to 72302): Exon 1 76433 76025 ( 409 n); cDNA 1 409 ( 409 n); score: 0.861 MATCH C08HBa0165B06.1- SGN-E317658- 0.861 409 1.000 C PGS_C08HBa0165B06.1-_SGN-E317658- (76433 76025) Alignment (genomic DNA sequence = upper lines): AATGGTGTAT CATAAACTAG TCCTGGATCA TTTGCCCTCG ATGGATTAAC ATGTCCTGCA 76374 |||||||||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| AATGGTGTAT CATAAACTAG TCCTGGATCA CCTGCTCTCG ATGGATTAAC ATGTCCTGCA 60 CCGATTGCAT AAATGTCAGC AGGAAGGAGC CTTTCGTCTA GTATTGGACT GTTGGCTAGG 76314 || |||||| | | ||||| | || |||| |||||||| | |||||||||| || || ||| CCCATTGCAA AGAGATCAGC ATAAATGAGC CTTTCGTCCA GTATTGGACT GTCGGAGAGG 120 TTTAATGTGT CAGCTGTTGT CATCATTGCA GACTTAATAG CAGCAGGAGA CCAATCAGGA 76254 |||| ||||| |||||||||| ||||||||| ||||||||| | |||||||| |||||||| | TTTACTGTGT CAGCTGTTGT CATCATTGCC CACTTAATAG CTGCAGGAGA CCAATCAGTA 180 TGTGTGCTCT TCAGCAGAGC AGCTACGCCA CTAAGGTGAG GGCAAGACAT TGATGTGCCT 76194 |||| ||| | |||||||||| || || ||| |||||||||| ||||| |||| ||| || | TGTGCGCTTT TCAGCAGAGC TGCAACACCA CTAAGGTGAG GGCAACACAT TGAGGTTCTG 240 GATATGATAT TGAATGTGGA TTTGGTGTTT TTGTTATCAT CCACAGAGGT AGGCCAAGCA 76134 |||| |||| ||||||| || ||| |||||| ||||| | || |||| ||||| |||||||||| GATACTATAT TGAATGTTGA TTTTGTGTTT TTGTTGTTAT CCACGGAGGT AGGCCAAGCA 300 GCAAGGATAT TAACACCAGG ACCGATTATG TCAGGTTTCA AGATGCCAAT ACTAGCTCCA 76074 ||||||| | |||||||||| |||||||||| |||||||| | |||||||| || ||| | GCAAGGACGT TAACACCAGG ACCGATTATG TCAGGTTTTA AGATGCCAGG ACCTGCTACG 360 CTTGGTCCGC GAGACGAAAA TGCAGCTACT ATGGGAGCAT TTTTATCTC 76025 |||||||| | | | ||| || ||| || || ||||||| |||| |||| CTTGGTCCTC CTCAGGTAAA TGAAGCACCT ATAGGAGCAT TTTTGTCTC 409 hqPGS_C08HBa0165B06.1-_SGN-E317658- (76433 76025) ******************************************************************************** EST sequence 96 -strand 574 n (File: SGN-E207413-) 1 CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 61 GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 121 TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 181 AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 241 AAGTCTCGAT ATGCAAAATG AAGGATAGTT TAATTGTGCT TCAGGGATAC TTTCAACCTC 301 CGAGCAATTC ACCCTGCGTC GTAACAATTT ACCTACCTGT GGATTTGTGT AGTTCAAACC 361 ACATAAATAA GGTACATAAT CCTCAAATGG GGTATCATAA ACTAGTCCTG GATCATTTGC 421 CCTCGATGGA TTAACATGTC CTGCACCTAT TGCATAGATA TCAGCAGGAC GGAGCCTTTG 481 GTCGAGTATT GGACTACTGG CAAGGTTTAA TGTGTCAGCG GTTGTCATCA TTGCAGACTT 541 AATAACAGCA GGAGACCAAT CAGGATGTGT TCTC Predicted gene structure (within gDNA segment 79138 to 75609): Exon 1 76818 76245 ( 574 n); cDNA 1 574 ( 574 n); score: 0.891 MATCH C08HBa0165B06.1- SGN-E207413- 0.891 574 1.000 C PGS_C08HBa0165B06.1-_SGN-E207413- (76818 76245) Alignment (genomic DNA sequence = upper lines): CACTGAGTGC CTATTAGAAG TCCACTTCAA GAATCCCTCA ATAACCTCAG TGTTTGAGCT 76759 ||| |||||| || |||||| |||||||||| |||||||||| | |||| ||| ||||||| CACAGAGTGC CTGTTAGAAT TCCACTTCAA GAATCCCTCA ACAACCCCAG ACATTGAGCT 60 ATTAGCTGTC TTGGAAAATG TCACTTGGTA TGTCAACTTC TGGTTCAACT CGGAGAAATT 76699 ||| |||| |||||||||| |||||||||| ||| | |||| |||||||||| | |||||||| GTTAATTGTC TTGGAAAATG TCACTTGGTA TGTTAGCTTC TGGTTCAACT CCGAGAAATT 120 TAGCTCGGAG GGTTCAACTT CGATGGCAAC GCCTTCTGGT GAAGCTACCT CCACTTTGTA 76639 ||||| | | || | ||||| | | |||| ||||| ||| ||||||| || ||| |||| TAGCTTGCTG GGCTTAACTT TCACGACAAC GCCTTTAGGT GAAGCTATCT GCACCGTGTA 180 AGATGATTTA GCATCACCAA CATTGGTCAC AGTTCTGGTA TATGTCTGAG GAGTTGATCC 76579 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGATGATTTG GCATCACCAA CATTGGTCAC AGTTCTGGTG TATGTCTGAG GAGTTGATCC 240 AAG-GTCGTA TATGGAAAAC GAAGGATAGT TTAATTGTGC TTCAAGAATA CTTTTCACCT 76520 ||| ||| | |||| |||| |||||||||| |||||||||| |||| | ||| |||| |||| AAGTCTCG-A TATGCAAAAT GAAGGATAGT TTAATTGTGC TTCAGGGATA CTTTCAACCT 299 CCGAGCAATT CACCTTGCGT TGTAACAGGT TACCTACCTG CCGATTTGTG TAGTTCAAAC 76460 |||||||||| |||| ||||| |||||| | |||||||||| |||||||| |||||||||| CCGAGCAATT CACCCTGCGT CGTAACAATT TACCTACCTG TGGATTTGTG TAGTTCAAAC 359 CACATAAATA AGGTACATAG TCCTCGAATG GTGTATCATA AACTAGTCCT GGATCATTTG 76400 |||||||||| ||||||||| ||||| |||| | |||||||| |||||||||| |||||||||| CACATAAATA AGGTACATAA TCCTCAAATG GGGTATCATA AACTAGTCCT GGATCATTTG 419 CCCTCGATGG ATTAACATGT CCTGCACCGA TTGCATAAAT GTCAGCAGGA AGGAGCCTTT 76340 |||||||||| |||||||||| |||||||| | ||||||| || ||||||||| ||||||||| CCCTCGATGG ATTAACATGT CCTGCACCTA TTGCATAGAT ATCAGCAGGA CGGAGCCTTT 479 CGTCTAGTAT TGGACTGTTG GCTAGGTTTA ATGTGTCAGC TGTTGTCATC ATTGCAGACT 76280 ||| ||||| |||||| || || ||||||| |||||||||| ||||||||| |||||||||| GGTCGAGTAT TGGACTACTG GCAAGGTTTA ATGTGTCAGC GGTTGTCATC ATTGCAGACT 539 TAATAGCAGC AGGAGACCAA TCAGGATGTG TGCTC 76245 ||||| |||| |||||||||| |||||||||| | ||| TAATAACAGC AGGAGACCAA TCAGGATGTG TTCTC 574 hqPGS_C08HBa0165B06.1-_SGN-E207413- (76818 76245) ******************************************************************************** EST sequence 357 +strand 493 n (File: SGN-E287935+) 1 TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 61 CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 121 TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 181 GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 241 CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 301 GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 361 CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 421 TCATCATTGC AGACTTAATA ACAGAAAAAA CATTCTTATT TCAAAATTAA GAATTATATT 481 GATATATCAT TAT Predicted gene structure (within gDNA segment 77314 to 74559): Exon 1 76714 76275 ( 440 n); cDNA 1 440 ( 440 n); score: 0.948 MATCH C08HBa0165B06.1- SGN-E287935+ 0.948 440 0.892 C PGS_C08HBa0165B06.1-_SGN-E287935+ (76714 76275) Alignment (genomic DNA sequence = upper lines): TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 76655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACTCGGA GAAATTTAGC TCGGAGGGTT CAACTTCGAT GGCAACGCCT TCTGGTGAAG 60 CTACCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT GGTCACAGTT CTGGTATATG 76595 |||||||||| |||||||||| ||| |||||| |||||||||| ||| |||||| |||||||||| CTACCTCCAC TTTGTAAGAT GATGTAGCAT CACCAACATT GGTTACAGTT CTGGTATATG 120 TCTGAGGAGT TGATCCAAGG TCGTATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 76535 |||||||||| ||||||||| | |||||| |||||||||| |||||||||| |||||||||| TCTGAGGAGT TGATCCAAGT CCAAATATGG AAAACGAAGG ATAGTTTAAT TGTGCTTCAA 180 GAATACTTTT CACCTCCGAG CAATTCACCT TGCGTTGTAA CAGGTTACCT ACCTGCCGAT 76475 | |||||||| |||||||||| ||||||||| ||||||||| |||||||||| ||||| ||| GGATACTTTT CACCTCCGAG CAATTCACCC TGCGTTGTAT CAGGTTACCT ACCTGTTGAT 240 TTGTGTAGTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 76415 |||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTACTT CAAACCACAT AAATAAGGTA CATAGTCCTC GAATGGTGTA TCATAAACTA 300 GTCCTGGATC ATTTGCCCTC GATGGATTAA CATGTCCTGC ACCGATTGCA TAAATGTCAG 76355 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| || ||||||| GTCCTGGATC ATTTGCCCTT GATGGATTAA CATGTCCTGC ACCAATTGCA TAGATGTCAG 360 CAGGAAGGAG CCTTTCGTCT AGTATTGGAC TGTTGGCTAG GTTTAATGTG TCAGCTGTTG 76295 |||||||||| |||||| || |||||||||| | || || || |||||| ||| ||||| |||| CAGGAAGGAG CCTTTCATCG AGTATTGGAC TATTAGCAAG GTTTAACGTG TCAGCCGTTG 420 TCATCATTGC AGACTTAATA 76275 |||||||||| |||||||||| TCATCATTGC AGACTTAATA 440 hqPGS_C08HBa0165B06.1-_SGN-E287935+ (76714 76275) ******************************************************************************** EST sequence 80 -strand 441 n (File: SGN-E307529-) 1 TTTTTTTTTT TCGAGTACTT TATGCACTTA TATATATAGC CAATTTTTCA CTAGACCAAT 61 ACAACTGCAA TTGGACTTCT CACAGAGTGC CTAGTAGAAG TCCACTTCAA GAATCCCTCA 121 ACAACCACAA CTTCTGAACT GCTGGTTGTC TTGGAAAATG TCACTTGGTA TGTTAACTTC 181 TGGTTCAACT TGGAGAAATT TAGTTCTGTG GGTACAACTT CTATGGCAAC TCCTATAGGT 241 GAAGCTATCT CCACTTTGTA AGATGATGCA ACATCACCAA CGTTGGTCAC AGTTCTTGTG 301 TATGTCTGAG GAGTTGATCC AAGTCCAAAT ATGGAAAACG AAGGATAGTT TAATTCTGCT 361 TCAGGGATAC TCTTTACTTC TAAGCAATTT ACCTTGCGTT GTAACAGTTT ACTTACCTGT 421 GCATTTGTGT ACCTCAAACC A Predicted gene structure (within gDNA segment 78093 to 75084): Exon 1 76866 76458 ( 409 n); cDNA 33 441 ( 409 n); score: 0.858 PPA cDNA 11 1 MATCH C08HBa0165B06.1- SGN-E307529- 0.858 409 0.927 C PGS_C08HBa0165B06.1-_SGN-E307529- (76866 76458) Alignment (genomic DNA sequence = upper lines): TATATAGCCA AATTTTCATT GGATCAACAA AAGTGCAATT GGACTTCTCA CTGAGTGCCT 76807 |||||||||| | |||||| | || ||| | || ||||||| |||||||||| | |||||||| TATATAGCCA ATTTTTCACT AGACCAATAC AACTGCAATT GGACTTCTCA CAGAGTGCCT 92 ATTAGAAGTC CACTTCAAGA ATCCCTCAAT AACCTCAGTG TTTGAGCTAT TAGCTGTCTT 76747 | |||||||| |||||||||| ||||||||| |||| || | ||| || | | |||||| AGTAGAAGTC CACTTCAAGA ATCCCTCAAC AACCACAACT TCTGAACTGC TGGTTGTCTT 152 GGAAAATGTC ACTTGGTATG TCAACTTCTG GTTCAACTCG GAGAAATTTA GCTCGGAGGG 76687 |||||||||| |||||||||| | |||||||| |||||||| | |||||||||| | || | ||| GGAAAATGTC ACTTGGTATG TTAACTTCTG GTTCAACTTG GAGAAATTTA GTTCTGTGGG 212 TTCAACTTCG ATGGCAACGC CTTCTGGTGA AGCTACCTCC ACTTTGTAAG ATGATTTAGC 76627 | ||||||| |||||||| | || ||||| ||||| |||| |||||||||| ||||| | | TACAACTTCT ATGGCAACTC CTATAGGTGA AGCTATCTCC ACTTTGTAAG ATGATGCAAC 272 ATCACCAACA TTGGTCACAG TTCTGGTATA TGTCTGAGGA GTTGATCCAA GGTCGTATAT 76567 ||||||||| |||||||||| |||| || || |||||||||| |||||||||| | | |||| ATCACCAACG TTGGTCACAG TTCTTGTGTA TGTCTGAGGA GTTGATCCAA GTCCAAATAT 332 GGAAAACGAA GGATAGTTTA ATTGTGCTTC AAGAATACTT TTCACCTCCG AGCAATTCAC 76507 |||||||||| |||||||||| ||| |||||| | | ||||| || || || ||||||| || GGAAAACGAA GGATAGTTTA ATTCTGCTTC AGGGATACTC TTTACTTCTA AGCAATTTAC 392 CTTGCGTTGT AACAGGTTAC CTACCTGCCG ATTTGTGTAG TTCAAACCA 76458 |||||||||| ||||| |||| |||||| ||||||||| |||||||| CTTGCGTTGT AACAGTTTAC TTACCTGTGC ATTTGTGTAC CTCAAACCA 441 hqPGS_C08HBa0165B06.1-_SGN-E307529- (76866 76458) ******************************************************************************** EST sequence 419 +strand 450 n (File: SGN-E237320+) 1 TTTTTTTTTT TTTTTTTGAC ATAAAACATA TACTGGAAAA AAAAAACAGC AATCCAATAT 61 GATTAATTGT GAATAATTTC TGCACTTATT TTTACATTTT AGATTGAAAG CATTTTAGTT 121 TTATTCAGCA GACACTCTAA CTGCAATTGG ACTTCTTACA GAGTGCCTAT TAGAATTCCA 181 CTTCAAAAAT CCCTCAACAT CACTGGTAGT TGAGATATTA GTTGTCTTGG TAAATATCAC 241 TTGATATGTC AACTTCTGGT TCAACGTTGA GAAATTTAGC GCGGAGGGTT CAACTTTCAC 301 GACAACTCCT TTTGGTGAAA CTATCTCCAC TTTGTAAGAT GATTTAGCAT CACCAACATT 361 GGTTACGGTT CTGGTATATG TCTGAGGAGT TGATCCAAGT CTGATGGAAA ATGAAGGATA 421 ATTTAGTTGC CCTTAGGGAT ACGTTTTACC Predicted gene structure (within gDNA segment 81090 to 75456): Exon 1 80000 79980 ( 21 n); cDNA 85 105 ( 21 n); score: 0.619 Intron 1 79979 79044 ( 936 n); Pd: 0.489 (s: 0), Pa: 0.931 (s: 0) Exon 2 79043 79018 ( 26 n); cDNA 106 130 ( 25 n); score: 0.577 Intron 2 79017 78207 ( 811 n); Pd: 0.900 (s: 0), Pa: 0.940 (s: 0) Exon 3 78206 78195 ( 12 n); cDNA 131 141 ( 11 n); score: 0.667 Intron 3 78194 76834 (1361 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.92) Exon 4 76833 76521 ( 313 n); cDNA 142 450 ( 309 n); score: 0.856 PPA cDNA 17 1 MATCH C08HBa0165B06.1- SGN-E237320+ 0.856 372 0.827 C PGS_C08HBa0165B06.1-_SGN-E237320+ (80000 79980,79043 79018,78206 78195,76833 76521) Alignment (genomic DNA sequence = upper lines): CTTTTTTCTC CTTTTTTACT GGTCATCGAA CACCACCTCA TTTTTCTCCA AATTTATCAT 79941 ||| ||| | | |||| | CTTATTTTTA CATTTTAGAT T......... .......... .......... .......... 105 CGTCAATATC TTTTTTTATT TTTAGCTTTT CAAACAATCA ATTACAAATT TTAATTTGTT 79881 .......... .......... .......... .......... .......... .......... 105 CATTAGAAAA CAATGCCACC AATCATCTTT TTCTTTATGC CAAATCAACT CAAACATGAA 79821 .......... .......... .......... .......... .......... .......... 105 TTGAATCTAA GCTTAAAAAT AAAACATTAA TTAGATAAAA AGAAGTAGAA AAACTTAGGT 79761 .......... .......... .......... .......... .......... .......... 105 GATTTAAGTG TTTTTTTGAA AGAAAAAAAA AAGGAGGAAG AAGATGAAGT TGGGGTGGGG 79701 .......... .......... .......... .......... .......... .......... 105 TGGGGGGAGG GGGGAGCAGG TCTGAGCGGA GGCAGGAACA TACATACTTT AGGATTTTAT 79641 .......... .......... .......... .......... .......... .......... 105 TTTTTTTAAT TATAATTATT TTTTAGCAAG AAAAACAAAT TTAAGACACG TGGCTTCTTT 79581 .......... .......... .......... .......... .......... .......... 105 TAATTAATTA GTTTGCCATG TCATGGCAAG TGCATCACAC ACACTTGACA TTTTTTGTTG 79521 .......... .......... .......... .......... .......... .......... 105 ATTATCAAAA TGTGTCTAAT AGGAAAATTT TTATATAAGT AAAAGTGTTC AATAGGTAAA 79461 .......... .......... .......... .......... .......... .......... 105 AGATTAAATT GAGATGTCTA AATGAATAAT GAGGACAACT TTAAGGGGTC ACATATGACT 79401 .......... .......... .......... .......... .......... .......... 105 TTGGCCTAAT ATGAAGTATC ACATAAGAAG CATGAAGTGT TGTAAATTAT GAATAATAAT 79341 .......... .......... .......... .......... .......... .......... 105 AATATTAAAA CATTAGAATG AAATACAATA TGAACAAACA AGAAACGTCA ACATTAAAGC 79281 .......... .......... .......... .......... .......... .......... 105 ATAATGAAAC AATATAAGAG ACAACAGAAT AGACCATGGT GTGACGCATT GAAGAGTATG 79221 .......... .......... .......... .......... .......... .......... 105 GGTCGAGGTT TAATCGATTA TGTTTGCATA TTTCAAGCAA TGTAATGTTG TTAGTATTTT 79161 .......... .......... .......... .......... .......... .......... 105 ATGATTTATA AATAGTTCAT TATTTGTGTT AGAATGAACA TATATGTATA TCATACCTAA 79101 .......... .......... .......... .......... .......... .......... 105 AACATCCTTA ATGTTCTTTG TGTATGTTCC ATTGTGGCGT TTTGGTTGCT CGGTTAGGAC 79041 || .......... .......... .......... .......... .......... .......GA- 107 AAGTACTTTT GTTGTGGACA TAGATATCCC TCTAGAGAGT GCCACGTACA ATTGACCATG 78981 ||| | ||| ||| | || AAGCATTTTA GTTTTATTCA GCA....... .......... .......... .......... 130 TGAGAAAACA TTTTGAGGCA AATACAATTC AACAATTGGA ATTGTTTGAC CTTGCGCTTT 78921 .......... .......... .......... .......... .......... .......... 130 ATTTATAGTC ATTGCAAAGC AAAGTCGTAT CAATTTTGAT GGTGATGAAA GCAAGAAACC 78861 .......... .......... .......... .......... .......... .......... 130 TGTTAAAAGT ATTACAACAT AAAGAGATAG TAAATGTAAT TTCCAATGAA CTAAATTAAT 78801 .......... .......... .......... .......... .......... .......... 130 AAAAAAGAAA CAAATTACTG CATCGAAAGT ATTACAAACT GAACGACTTC AAAATGGAAA 78741 .......... .......... .......... .......... .......... .......... 130 AGTCTTTGGC CGACAATCTT TAGACTTGTT ATGGCAGAAC GTGGATATTG CCAAGAAAAG 78681 .......... .......... .......... .......... .......... .......... 130 CTGAGTATTG GAAGATATTA CAACAATAAA GCTCTACGAC TAAAGCTTTG GCCAATTAGG 78621 .......... .......... .......... .......... .......... .......... 130 AAGAAATCAC TTCAATTTAT AAGAAAAAGT CATATATGTC TCTTCTGTGT TAGGATTGTG 78561 .......... .......... .......... .......... .......... .......... 130 ACAATGCTAA TTAATTAATG CAAACATCTT GTAGTAATAT GGTGTTTCTT GTGGTACCTT 78501 .......... .......... .......... .......... .......... .......... 130 ACCATACATG ATTTTGGTAA AAGCTAATGA TGTTGTATCG TTACTGTTCT AATTGTGGAC 78441 .......... .......... .......... .......... .......... .......... 130 CGTATTGAAG TTTTATGCGA AAACAAACCA TAGACAAACA GTATTGAAGG TTTATGCAAA 78381 .......... .......... .......... .......... .......... .......... 130 AGCAAATCAT AGACAGGTGG TGAAGTTAGT TTGTTGTTTA GAAACTTTTT TTTTTTGTAA 78321 .......... .......... .......... .......... .......... .......... 130 TATGCGTAGA GCTGTACTAT ACCCTGTATT ATGCTCGTTA CTTATGGCCT TGTGATTTAG 78261 .......... .......... .......... .......... .......... .......... 130 GATAGATATT CAACTAAGTA TAGAGGAAAA TTACAATGAA ATTTCTTTTA TTAGGAAACT 78201 || ||| .......... .......... .......... .......... .......... ....GACACT 136 CACAATGTCA ACTATTTCAA AACAAACGAC AAGCTCCTTG CGGAACAACA AAAAAAGAGT 78141 | || C-TAAC.... .......... .......... .......... .......... .......... 141 GTCTGAATTA AAATCAGGAT TTTTTAGGAC TATCTGAATC TGTGGAGGAT CGAATTAGTG 78081 .......... .......... .......... .......... .......... .......... 141 CATAAGTTTG AAATAATCTG CTGTTAGAAG CTGCATATTA AAGAGAACCA TTAGGCACAA 78021 .......... .......... .......... .......... .......... .......... 141 TATTGCTAAC TACTTTTGCA TTTGACAGAG ATCCCAGCCA TGCAGATCAC TAAGCGAAGA 77961 .......... .......... .......... .......... .......... .......... 141 AATTGATAAT AACTGAAAAT CCATGCTTTC AGGCAGAATC AAGAATGAAA AGATAGAATT 77901 .......... .......... .......... .......... .......... .......... 141 TTACTTTACT AACCGTACTT ATTCATTAAA CAACAATTTG AGGAGTACTT TACTGTCCAT 77841 .......... .......... .......... .......... .......... .......... 141 ATTTTTTTTA TTCAACAACA ATATGAGGAT TTTTTTTACC TGATTTATTT GATTGAGGCA 77781 .......... .......... .......... .......... .......... .......... 141 CAGAAACGAT AACAGATTAA TGGGCAATAA CAACTTCTTG GAGACATTTA TATAGACGCC 77721 .......... .......... .......... .......... .......... .......... 141 TGAAGTATCT GAAAAGCCTG CTGAAGCTGA GTGTTGGAAA TTTTTTGTCC CACTGATCGA 77661 .......... .......... .......... .......... .......... .......... 141 AGAGTTTGAG CAGAAACTTG GACGAAGAGG ATGAGGCAAC GTTTAGTTTC TGGAGAATTA 77601 .......... .......... .......... .......... .......... .......... 141 AAGCAGCTAC TCTACGTCTC TGTTACATTG AACATGAGGC AACAGTTAGT CTGTGGTGAA 77541 .......... .......... .......... .......... .......... .......... 141 TTTAAAGCAG CAACTCTACG TCTCTGTTAC ATTGAACATG AGGCAACAAT TGGTCTGTGG 77481 .......... .......... .......... .......... .......... .......... 141 AGAATTAAAA GCAGCGACTC TTCGTCTCTT ACATTGAACA TGAGGTTAAG GCTGAGGCAA 77421 .......... .......... .......... .......... .......... .......... 141 CGGTTGATGT GTGAAGAAAT AATTTAGATA TCATCAGCTA ATTTATAATA AATTAATTTA 77361 .......... .......... .......... .......... .......... .......... 141 TTAAAATTAT AGAGATAAAA CAGTAAATTA ACTTTTGGGT TAAACTCTTC AGATTTATAA 77301 .......... .......... .......... .......... .......... .......... 141 TATGATATGA TTTGGTAAAT AAATAAAAAG ATACTAACTC AAAAGCATTT ATATGGAAGG 77241 .......... .......... .......... .......... .......... .......... 141 TACCAAAATA TTATGAGGGT TGAAGGTGGG GGGTTCAAGT GTGGTCAAGA CTCAAAGGAT 77181 .......... .......... .......... .......... .......... .......... 141 GGGGTTTAAG AAGATTGTTT TGCTAGAGAA AATATTTTGA TCGACCAATC AAACATGAAA 77121 .......... .......... .......... .......... .......... .......... 141 AAAATTGAAA ACAAAAAATG TTCTGCCGCC ACCAAAAAAG TAAAAGAAAT GATAAAAGGA 77061 .......... .......... .......... .......... .......... .......... 141 AAAATTGATT ACTATCAATA AGGATATGCA TTTATTTTCT TCAATTAGGT GTGAACAAAC 77001 .......... .......... .......... .......... .......... .......... 141 ATTGAAGCAG TATTTAATAT TAAAGACCAA ATAATTATCA ATATAGTACT GTAGTTTAAA 76941 .......... .......... .......... .......... .......... .......... 141 AAAAAAAGAA GAAGCATATA GTGGAAAGAA ACAGAACTTT CACTATAATC AAATGTTTGA 76881 .......... .......... .......... .......... .......... .......... 141 GTACTTTATG CAGTTATATA GCCAAATTTT CATTGGATCA ACAAAAGTGC AATTGGACTT 76821 ||| |||||||||| .......... .......... .......... .......... .......TGC AATTGGACTT 154 CTCACTGAGT GCCTATTAGA AGTCCACTTC AAGAATCCCT CAATAACCTC AGTGTTTGAG 76761 || || |||| |||||||||| | |||||||| || ||||||| ||| | | || ||||| CTTACAGAGT GCCTATTAGA ATTCCACTTC AAAAATCCCT CAACATCACT GGTAGTTGAG 214 CTATTAGCTG TCTTGGAAAA TGTCACTTGG TATGTCAACT TCTGGTTCAA CTCGGAGAAA 76701 |||||| || |||||| ||| | ||||||| |||||||||| |||||||||| | |||||| ATATTAGTTG TCTTGGTAAA TATCACTTGA TATGTCAACT TCTGGTTCAA CGTTGAGAAA 274 TTTAGCTCGG AGGGTTCAAC TTCGATGGCA ACGCCTTCTG GTGAAGCTAC CTCCACTTTG 76641 |||||| ||| |||||||||| || | | || || |||| || ||||| ||| |||||||||| TTTAGCGCGG AGGGTTCAAC TTTCACGACA ACTCCTTTTG GTGAAACTAT CTCCACTTTG 334 TAAGATGATT TAGCATCACC AACATTGGTC ACAGTTCTGG TATATGTCTG AGGAGTTGAT 76581 |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| TAAGATGATT TAGCATCACC AACATTGGTT ACGGTTCTGG TATATGTCTG AGGAGTTGAT 394 CCAAGGTCGT ATATGGAAAA CGAAGGATAG TTTAATTGTG CTTCAAGAAT ACTTTTCACC 76521 |||| ||| | |||||||| |||||||| |||| ||| ||| | | || || ||| ||| CCAA-GTC-T -GATGGAAAA TGAAGGATAA TTTAGTTGCC CTT-AGGGAT ACGTTTTACC 450 hqPGS_C08HBa0165B06.1-_SGN-E237320+ (76833 76521) ******************************************************************************** EST sequence 70 -strand 446 n (File: SGN-E353214-) 1 TTTTCAAATG TCCGAGTACT TAATGCACTT ATATAGCCAA TTTTTGACTA GGCAGACACA 61 ACTGCAATTG GACTTCTCAC TGAGTGCCTA TTAGAAGTCC ACTTCAAGAA TCCCTCAATA 121 ACCGCTCAGT GATGAGCTGT TCACCAGAGT GGAGGAACGA GCCACGTGTC ATGCAAAAGA 181 GCTTCTTCAG AATCTTCAGT TTTTTCATAT TGTTGCTTCA CTTTCTCTTG TGTAGAGATT 241 TGAATGTTTA ATTAGTAGAA TTTTCAAAAG AGAGACAAAG AGGCTCTAGT GAAAGTCTAT 301 ATGTCTCTCA TGTATTAGAA TGAAATATTG TTAGAGAAAT TAAGACTGAC TTGTAGTTTG 361 GTTTGGTTGA TAATATATGA TCGGTAAAAA TTAAATGTTT AAATTTGTGA TTTAACCAAA 421 AAAAAAAAAA AAAAAAAAAA AAACTC Predicted gene structure (within gDNA segment 78063 to 72943): Exon 1 76892 76759 ( 134 n); cDNA 4 138 ( 135 n); score: 0.843 PPA cDNA 418 444 MATCH C08HBa0165B06.1- SGN-E353214- 0.843 134 0.300 C PGS_C08HBa0165B06.1-_SGN-E353214- (76892 76759) Alignment (genomic DNA sequence = upper lines): TCAAATGTTT GAGTACTTTA TGCAGTTATA TAGCCAAATT TTCATTGGAT CAACAAAAGT 76833 |||||||| |||||||| | |||| ||||| ||||||| || || | | | ||| || | TCAAATGTCC GAGTACTTAA TGCACTTATA TAGCCAATTT TTGACTAGGC AGACACAACT 63 GCAATTGGAC TTCTCACTGA GTGCCTATTA GAAGTCCACT TCAAGAATCC CTCAATAA-C 76774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GCAATTGGAC TTCTCACTGA GTGCCTATTA GAAGTCCACT TCAAGAATCC CTCAATAACC 123 -CTCAGTGTT TGAGCT 76759 ||||||| |||||| GCTCAGTG-A TGAGCT 138 hqPGS_C08HBa0165B06.1-_SGN-E353214- (76892 76759) ******************************************************************************** EST sequence 23 +strand 433 n (File: SGN-E280646+) 1 TCTTCTCTAT GACCAAAACT CTGAATATAA AAAGAGTAAA AAAAAATGGC ATTTTTGAGG 61 TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 121 GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 181 TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 241 AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 301 AATGGAGTCG TTTTGCCTGA GTTGCTGACA GAGTTTATGG TGGATATGTC GTGTCAAGGC 361 TGTGTTAGTG CTGTCAAGAG CAAATTGCAA ACCGTAGAAG GAGTCAAGAA TGTAGATGTG 421 GATCTTGATA ATC Predicted gene structure (within gDNA segment 81192 to 83874): Exon 1 81792 82091 ( 300 n); cDNA 1 300 ( 300 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 301 327 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 328 400 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 0) Exon 4 83232 83264 ( 33 n); cDNA 401 433 ( 33 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E280646+ 1.000 433 1.000 C PGS_C08HBa0165B06.1+_SGN-E280646+ (81792 82091,82381 82407,83048 83120,83232 83264) Alignment (genomic DNA sequence = upper lines): TCTTCTCTAT GACCAAAACT CTGAATATAA AAAGAGTAAA AAAAAATGGC ATTTTTGAGG 81851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTCTAT GACCAAAACT CTGAATATAA AAAGAGTAAA AAAAAATGGC ATTTTTGAGG 60 TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 81911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 120 GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 81971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 180 TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 82031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 240 AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 82091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 300 GTAATAATTT TATCCTTCAG CTCTTTTATC TTTTTGTTGA TTTTTTGAAT TATTTGGAGA 82151 .......... .......... .......... .......... .......... .......... 300 ATCTTACAGG GGTCAATTGG TTGGCTAATT GAATTTTCAC CTATTGGCGA GGATTTAGGG 82211 .......... .......... .......... .......... .......... .......... 300 TTTAGGGAGG TCTTACTTGT ATTGCAATTC TTCACTACTA AATTTTAGAT CCATCTCTTT 82271 .......... .......... .......... .......... .......... .......... 300 TTTTTAATCC AGAATGAAAA ACTAATATGT TTAATTTTTT TTTGTTTGTA AATTTGGCAA 82331 .......... .......... .......... .......... .......... .......... 300 TAAATGGATG CTATTGTTCT AATTGGGTTA TGTGATTTTT CGTTTGCAGA ATGGAGTCGT 82391 | |||||||||| .......... .......... .......... .......... .........A ATGGAGTCGT 311 TTTGCCTGAG TTGCTGGTAA GTTTTTTCTC AGGAAAAAAA AAATCTCTGT TATTTTTGTT 82451 |||||||||| |||||| TTTGCCTGAG TTGCTG.... .......... .......... .......... .......... 327 TGGAGGAGAA ATGAGGAAAT TTCTGGTGTT TTTTTATTGC ACATTGGAAG CTGTACAATA 82511 .......... .......... .......... .......... .......... .......... 327 AATAGGATTC TTGTACTTAT AAAGAGTCTA GTAACTTTGT ACTTTGGATA GTACTATGAG 82571 .......... .......... .......... .......... .......... .......... 327 TAGTACAACA TTTGATGAAA GGAGGAGATG TACACTTAAG AGTAGTATTA TATCAATCTT 82631 .......... .......... .......... .......... .......... .......... 327 TTTCGCCTCT GCTTTAGGTA GATCAACTAA CATCTTCTGT TAGAAGAGAG GACAAGAGCC 82691 .......... .......... .......... .......... .......... .......... 327 CTTATATAAT GCTACTACAA ACAATATTCA TTTGTCAATA AAAAATCTGT AGCTCTGCTT 82751 .......... .......... .......... .......... .......... .......... 327 TTGAATTATA TTGCCGATAA CACGTGACGG TTTTTTCTCC TTGATCAATT GCTGAGGTAA 82811 .......... .......... .......... .......... .......... .......... 327 ATTGATTGTG CTGGTTGTAA TGTGATTAGT GAGTGTATCA GAGATGATGA CTTTTAACGG 82871 .......... .......... .......... .......... .......... .......... 327 GAGGGGGGTA TCTTTTAATC TTGATGGCTT AATGTAGCCC ATTTTGTTGG TTATTGAAGG 82931 .......... .......... .......... .......... .......... .......... 327 TTTAGTTTGG GGGGCTTATG TTTGTTTCTA TTGGTTTCTT TGTGAGTTGA TATATTATGT 82991 .......... .......... .......... .......... .......... .......... 327 TGCACATTGT TGTTTTTTTC CACGTTAAAC TGATCATATT GACAAATTGG TGACAGACAG 83051 |||| .......... .......... .......... .......... .......... ......ACAG 331 AGTTTATGGT GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA 83111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTATGGT GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA 391 CCGTAGAAGG TATATGCTAA GAAAAAAGAA GAAGAGAGAA ACCATGCCCT GTAATGGGGC 83171 ||||||||| CCGTAGAAG. .......... .......... .......... .......... .......... 400 TTTATTTTTA ACTTCCTCAT TTGTTTTGGT GTTGAAAGAG ATCTTTTATG TGGCTTTTAG 83231 .......... .......... .......... .......... .......... .......... 400 GAGTCAAGAA TGTAGATGTG GATCTTGATA ATC 83264 |||||||||| |||||||||| |||||||||| ||| GAGTCAAGAA TGTAGATGTG GATCTTGATA ATC 433 hqPGS_C08HBa0165B06.1+_SGN-E280646+ (81792 82091,82381 82407,83048 83120,83232 83264) ******************************************************************************** EST sequence 53 +strand 722 n (File: SGN-E341939+) 1 CAAAACTCTG AATATAAAAA GAGTAAAAAA AAATGGCATT TTTGAGGTCC ATTGTGACTG 61 CAAAAACTAC CGCCATTGCT GCTGCTATTC CAGCTGCTGC TTTTGCTGTT TCTTCTATTT 121 CTTCTTCTTC GCAGTTTGAA CGTCCGTTGA AAAATCTAAA ATTTGGCTCA ATTTCTAGTT 181 CGAATTCGAT TCTCCAATTA AGCTTCGCGA AGAATCTACA AAAAAAGAGT CCTCCTTCAG 241 CTCTTCATAT GGAAACGCAT TCTTCAAATC ACCAAACTTC CTCCGATAAT GGAGTCGTTT 301 TGCCTGAGTT GCTGACAGAG TTTATGGTGG ATATGTCGTG TCAAGGCTGT GTTAGTGCTG 361 TCAAGAGCAA ATTGCAAACC GTAGAAGGAG TCAAGAATGT AGATGTGGAT CTTGATAATC 421 AAGTAGTGAG AATTCTTGGA TCTTCACCTG TGAAGACAAT GACTGAAGCC TTGGAGCAAA 481 CAGGTCGAAA AGCCCGTCTG ATTGGGCAAG GAGTACCGGA TGATTTCCTT ATATCTGCTG 541 CCGTTGCCGA ATTCAAAGGA CCCAGATATT TTTGGTGTTG TTCGCTTGGC TCAAGTCAAT 601 ATGGAATTAA CTAGGATTGA AGCAAACTTC AGTGGCCTGT CACCTGGGAA GCATGCTTGG 661 TCTATTAATG AATTTGGTAT TTTGACGAGG GGGGCAGCTA GTACTGGAAA ATTGTACAGC 721 CT Predicted gene structure (within gDNA segment 81205 to 84469): Exon 1 81805 82091 ( 287 n); cDNA 1 287 ( 287 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 288 314 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 315 387 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 388 522 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 0.95) Exon 5 83661 83859 ( 199 n); cDNA 523 722 ( 200 n); score: 0.977 MATCH C08HBa0165B06.1+ SGN-E341939+ 0.994 721 0.999 C PGS_C08HBa0165B06.1+_SGN-E341939+ (81805 82091,82381 82407,83048 83120,83232 83366,83661 83859) Alignment (genomic DNA sequence = upper lines): CAAAACTCTG AATATAAAAA GAGTAAAAAA AAATGGCATT TTTGAGGTCC ATTGTGACTG 81864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAACTCTG AATATAAAAA GAGTAAAAAA AAATGGCATT TTTGAGGTCC ATTGTGACTG 60 CAAAAACTAC CGCCATTGCT GCTGCTATTC CAGCTGCTGC TTTTGCTGTT TCTTCTATTT 81924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAACTAC CGCCATTGCT GCTGCTATTC CAGCTGCTGC TTTTGCTGTT TCTTCTATTT 120 CTTCTTCTTC GCAGTTTGAA CGTCCGTTGA AAAATCTAAA ATTTGGCTCA ATTTCTAGTT 81984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTTC GCAGTTTGAA CGTCCGTTGA AAAATCTAAA ATTTGGCTCA ATTTCTAGTT 180 CGAATTCGAT TCTCCAATTA AGCTTCGCGA AGAATCTACA AAAAAAGAGT CCTCCTTCAG 82044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAATTCGAT TCTCCAATTA AGCTTCGCGA AGAATCTACA AAAAAAGAGT CCTCCTTCAG 240 CTCTTCATAT GGAAACGCAT TCTTCAAATC ACCAAACTTC CTCCGATGTA ATAATTTTAT 82104 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTCTTCATAT GGAAACGCAT TCTTCAAATC ACCAAACTTC CTCCGAT... .......... 287 CCTTCAGCTC TTTTATCTTT TTGTTGATTT TTTGAATTAT TTGGAGAATC TTACAGGGGT 82164 .......... .......... .......... .......... .......... .......... 287 CAATTGGTTG GCTAATTGAA TTTTCACCTA TTGGCGAGGA TTTAGGGTTT AGGGAGGTCT 82224 .......... .......... .......... .......... .......... .......... 287 TACTTGTATT GCAATTCTTC ACTACTAAAT TTTAGATCCA TCTCTTTTTT TTAATCCAGA 82284 .......... .......... .......... .......... .......... .......... 287 ATGAAAAACT AATATGTTTA ATTTTTTTTT GTTTGTAAAT TTGGCAATAA ATGGATGCTA 82344 .......... .......... .......... .......... .......... .......... 287 TTGTTCTAAT TGGGTTATGT GATTTTTCGT TTGCAGAATG GAGTCGTTTT GCCTGAGTTG 82404 |||| |||||||||| |||||||||| .......... .......... .......... ......AATG GAGTCGTTTT GCCTGAGTTG 311 CTGGTAAGTT TTTTCTCAGG AAAAAAAAAA TCTCTGTTAT TTTTGTTTGG AGGAGAAATG 82464 ||| CTG....... .......... .......... .......... .......... .......... 314 AGGAAATTTC TGGTGTTTTT TTATTGCACA TTGGAAGCTG TACAATAAAT AGGATTCTTG 82524 .......... .......... .......... .......... .......... .......... 314 TACTTATAAA GAGTCTAGTA ACTTTGTACT TTGGATAGTA CTATGAGTAG TACAACATTT 82584 .......... .......... .......... .......... .......... .......... 314 GATGAAAGGA GGAGATGTAC ACTTAAGAGT AGTATTATAT CAATCTTTTT CGCCTCTGCT 82644 .......... .......... .......... .......... .......... .......... 314 TTAGGTAGAT CAACTAACAT CTTCTGTTAG AAGAGAGGAC AAGAGCCCTT ATATAATGCT 82704 .......... .......... .......... .......... .......... .......... 314 ACTACAAACA ATATTCATTT GTCAATAAAA AATCTGTAGC TCTGCTTTTG AATTATATTG 82764 .......... .......... .......... .......... .......... .......... 314 CCGATAACAC GTGACGGTTT TTTCTCCTTG ATCAATTGCT GAGGTAAATT GATTGTGCTG 82824 .......... .......... .......... .......... .......... .......... 314 GTTGTAATGT GATTAGTGAG TGTATCAGAG ATGATGACTT TTAACGGGAG GGGGGTATCT 82884 .......... .......... .......... .......... .......... .......... 314 TTTAATCTTG ATGGCTTAAT GTAGCCCATT TTGTTGGTTA TTGAAGGTTT AGTTTGGGGG 82944 .......... .......... .......... .......... .......... .......... 314 GCTTATGTTT GTTTCTATTG GTTTCTTTGT GAGTTGATAT ATTATGTTGC ACATTGTTGT 83004 .......... .......... .......... .......... .......... .......... 314 TTTTTTCCAC GTTAAACTGA TCATATTGAC AAATTGGTGA CAGACAGAGT TTATGGTGGA 83064 ||||||| |||||||||| .......... .......... .......... .......... ...ACAGAGT TTATGGTGGA 331 TATGTCGTGT CAAGGCTGTG TTAGTGCTGT CAAGAGCAAA TTGCAAACCG TAGAAGGTAT 83124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| TATGTCGTGT CAAGGCTGTG TTAGTGCTGT CAAGAGCAAA TTGCAAACCG TAGAAG.... 387 ATGCTAAGAA AAAAGAAGAA GAGAGAAACC ATGCCCTGTA ATGGGGCTTT ATTTTTAACT 83184 .......... .......... .......... .......... .......... .......... 387 TCCTCATTTG TTTTGGTGTT GAAAGAGATC TTTTATGTGG CTTTTAGGAG TCAAGAATGT 83244 ||| |||||||||| .......... .......... .......... .......... .......GAG TCAAGAATGT 400 AGATGTGGAT CTTGATAATC AAGTAGTGAG AATTCTTGGA TCTTCACCTG TGAAGACAAT 83304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGTGGAT CTTGATAATC AAGTAGTGAG AATTCTTGGA TCTTCACCTG TGAAGACAAT 460 GACTGAAGCC TTGGAGCAAA CAGGTCGAAA AGCCCGTCTG ATTGGGCAAG GAGTACCGGA 83364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTGAAGCC TTGGAGCAAA CAGGTCGAAA AGCCCGTCTG ATTGGGCAAG GAGTACCGGA 520 TGGTATGTTC CGATCTTATC TAATTGCATC TGTCATGTTT CCTAAGTTAG TATTATAGAA 83424 || TG........ .......... .......... .......... .......... .......... 522 AATTTGTGAA GCATTATGTC TTCACATCTC TGGCTATGTT AAAGAGGATG AGCAGAAGTA 83484 .......... .......... .......... .......... .......... .......... 522 AAGCATACTT ATGATTATAG TGTGTAATGG CCTTCTTAAG TGCTGAAGGG AACGAAGAGT 83544 .......... .......... .......... .......... .......... .......... 522 GCAAAAAAAG AGATATTATG CACTTCTCTC ATGAGCTTCA GTCGTCTTAG CTTTATCTGC 83604 .......... .......... .......... .......... .......... .......... 522 TTTATATTTT ATGCGATGCA TCTTACTTTT ATATTCATTT GAACCATGCC CTGTAGATTT 83664 |||| .......... .......... .......... .......... .......... ......ATTT 526 CCTTATATCT GCTGCCGTTG CCGAATTCAA AGGA-CCAGA TATTTTTGGT GTTGTTCGCT 83723 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CCTTATATCT GCTGCCGTTG CCGAATTCAA AGGACCCAGA TATTTTTGGT GTTGTTCGCT 586 TGGCTCAAGT CAATATGGAA TTAACTAGGA TTGAAGCAAA CTTCAGTGGC CTGTCACCTG 83783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCTCAAGT CAATATGGAA TTAACTAGGA TTGAAGCAAA CTTCAGTGGC CTGTCACCTG 646 GGAAGCATGC TTGGTCTATT AATGAATTTG GTGATTTGAC GAGGGGGGCA GCTAGTACTG 83843 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| GGAAGCATGC TTGGTCTATT AATGAATTTG GTATTTTGAC GAGGGGGGCA GCTAGTACTG 706 GAAAATTGTA CAGCCT 83859 |||||||||| |||||| GAAAATTGTA CAGCCT 722 hqPGS_C08HBa0165B06.1+_SGN-E341939+ (81805 82091,82381 82407,83048 83120,83232 83366,83661 83859) ******************************************************************************** EST sequence 123 +strand 522 n (File: SGN-E329759+) 1 AAAAGAGTAA AAAAAAATGG CATTTTTGAG GTCCATTGTG ACTGCAAAAA CTACCGCCAT 61 TGCTGCTGCT ATTCCAGCTG CTGCTTTTGC TGTTTCTTCT ATTTCTTCTT CTTCGCAGTT 121 TGAACGTCCG TTGAAAAATC TAAAATTTGG CTCAATTTCT AGTTCGAATT CGATTCTCCA 181 ATTAAGCTTC GCGAAGAATC TACAAAAAAA GAGTCCTCCT TCAGCTCTTC ATATGGAAAC 241 GCATTCTTCA AATCACCAAA CTTCCTCCGA TAATGGAGTC GTTTTGCCTG AGTTGCTGAC 301 AGAGTTTATG GTGGATATGT CGTGTCAAGG CTGTGTTAGT GCTGTCAAGA GCAAATTGCA 361 AACCGTAGAA GGAGTCAAGA ATGTAGATGT GGATCTTGAT AATCAAGTAG TGAGAATTCT 421 TGGATCTTCA CCTGTGAAGA CAATGACTGA AGCCTTGGAG CAAACAGGTC GAAAAGCCCG 481 TCTGATTGGG CAAGGAGTAC CGGATGATTT CCTTATATCT GC Predicted gene structure (within gDNA segment 81221 to 84136): Exon 1 81821 82091 ( 271 n); cDNA 1 271 ( 271 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 272 298 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 299 371 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 372 506 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 0) Exon 5 83661 83676 ( 16 n); cDNA 507 522 ( 16 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E329759+ 1.000 522 1.000 C PGS_C08HBa0165B06.1+_SGN-E329759+ (81821 82091,82381 82407,83048 83120,83232 83366,83661 83676) Alignment (genomic DNA sequence = upper lines): AAAAGAGTAA AAAAAAATGG CATTTTTGAG GTCCATTGTG ACTGCAAAAA CTACCGCCAT 81880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAGTAA AAAAAAATGG CATTTTTGAG GTCCATTGTG ACTGCAAAAA CTACCGCCAT 60 TGCTGCTGCT ATTCCAGCTG CTGCTTTTGC TGTTTCTTCT ATTTCTTCTT CTTCGCAGTT 81940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGCTGCT ATTCCAGCTG CTGCTTTTGC TGTTTCTTCT ATTTCTTCTT CTTCGCAGTT 120 TGAACGTCCG TTGAAAAATC TAAAATTTGG CTCAATTTCT AGTTCGAATT CGATTCTCCA 82000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAACGTCCG TTGAAAAATC TAAAATTTGG CTCAATTTCT AGTTCGAATT CGATTCTCCA 180 ATTAAGCTTC GCGAAGAATC TACAAAAAAA GAGTCCTCCT TCAGCTCTTC ATATGGAAAC 82060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAGCTTC GCGAAGAATC TACAAAAAAA GAGTCCTCCT TCAGCTCTTC ATATGGAAAC 240 GCATTCTTCA AATCACCAAA CTTCCTCCGA TGTAATAATT TTATCCTTCA GCTCTTTTAT 82120 |||||||||| |||||||||| |||||||||| | GCATTCTTCA AATCACCAAA CTTCCTCCGA T......... .......... .......... 271 CTTTTTGTTG ATTTTTTGAA TTATTTGGAG AATCTTACAG GGGTCAATTG GTTGGCTAAT 82180 .......... .......... .......... .......... .......... .......... 271 TGAATTTTCA CCTATTGGCG AGGATTTAGG GTTTAGGGAG GTCTTACTTG TATTGCAATT 82240 .......... .......... .......... .......... .......... .......... 271 CTTCACTACT AAATTTTAGA TCCATCTCTT TTTTTTAATC CAGAATGAAA AACTAATATG 82300 .......... .......... .......... .......... .......... .......... 271 TTTAATTTTT TTTTGTTTGT AAATTTGGCA ATAAATGGAT GCTATTGTTC TAATTGGGTT 82360 .......... .......... .......... .......... .......... .......... 271 ATGTGATTTT TCGTTTGCAG AATGGAGTCG TTTTGCCTGA GTTGCTGGTA AGTTTTTTCT 82420 |||||||||| |||||||||| ||||||| .......... .......... AATGGAGTCG TTTTGCCTGA GTTGCTG... .......... 298 CAGGAAAAAA AAAATCTCTG TTATTTTTGT TTGGAGGAGA AATGAGGAAA TTTCTGGTGT 82480 .......... .......... .......... .......... .......... .......... 298 TTTTTTATTG CACATTGGAA GCTGTACAAT AAATAGGATT CTTGTACTTA TAAAGAGTCT 82540 .......... .......... .......... .......... .......... .......... 298 AGTAACTTTG TACTTTGGAT AGTACTATGA GTAGTACAAC ATTTGATGAA AGGAGGAGAT 82600 .......... .......... .......... .......... .......... .......... 298 GTACACTTAA GAGTAGTATT ATATCAATCT TTTTCGCCTC TGCTTTAGGT AGATCAACTA 82660 .......... .......... .......... .......... .......... .......... 298 ACATCTTCTG TTAGAAGAGA GGACAAGAGC CCTTATATAA TGCTACTACA AACAATATTC 82720 .......... .......... .......... .......... .......... .......... 298 ATTTGTCAAT AAAAAATCTG TAGCTCTGCT TTTGAATTAT ATTGCCGATA ACACGTGACG 82780 .......... .......... .......... .......... .......... .......... 298 GTTTTTTCTC CTTGATCAAT TGCTGAGGTA AATTGATTGT GCTGGTTGTA ATGTGATTAG 82840 .......... .......... .......... .......... .......... .......... 298 TGAGTGTATC AGAGATGATG ACTTTTAACG GGAGGGGGGT ATCTTTTAAT CTTGATGGCT 82900 .......... .......... .......... .......... .......... .......... 298 TAATGTAGCC CATTTTGTTG GTTATTGAAG GTTTAGTTTG GGGGGCTTAT GTTTGTTTCT 82960 .......... .......... .......... .......... .......... .......... 298 ATTGGTTTCT TTGTGAGTTG ATATATTATG TTGCACATTG TTGTTTTTTT CCACGTTAAA 83020 .......... .......... .......... .......... .......... .......... 298 CTGATCATAT TGACAAATTG GTGACAGACA GAGTTTATGG TGGATATGTC GTGTCAAGGC 83080 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......ACA GAGTTTATGG TGGATATGTC GTGTCAAGGC 331 TGTGTTAGTG CTGTCAAGAG CAAATTGCAA ACCGTAGAAG GTATATGCTA AGAAAAAAGA 83140 |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTAGTG CTGTCAAGAG CAAATTGCAA ACCGTAGAAG .......... .......... 371 AGAAGAGAGA AACCATGCCC TGTAATGGGG CTTTATTTTT AACTTCCTCA TTTGTTTTGG 83200 .......... .......... .......... .......... .......... .......... 371 TGTTGAAAGA GATCTTTTAT GTGGCTTTTA GGAGTCAAGA ATGTAGATGT GGATCTTGAT 83260 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GAGTCAAGA ATGTAGATGT GGATCTTGAT 400 AATCAAGTAG TGAGAATTCT TGGATCTTCA CCTGTGAAGA CAATGACTGA AGCCTTGGAG 83320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCAAGTAG TGAGAATTCT TGGATCTTCA CCTGTGAAGA CAATGACTGA AGCCTTGGAG 460 CAAACAGGTC GAAAAGCCCG TCTGATTGGG CAAGGAGTAC CGGATGGTAT GTTCCGATCT 83380 |||||||||| |||||||||| |||||||||| |||||||||| |||||| CAAACAGGTC GAAAAGCCCG TCTGATTGGG CAAGGAGTAC CGGATG.... .......... 506 TATCTAATTG CATCTGTCAT GTTTCCTAAG TTAGTATTAT AGAAAATTTG TGAAGCATTA 83440 .......... .......... .......... .......... .......... .......... 506 TGTCTTCACA TCTCTGGCTA TGTTAAAGAG GATGAGCAGA AGTAAAGCAT ACTTATGATT 83500 .......... .......... .......... .......... .......... .......... 506 ATAGTGTGTA ATGGCCTTCT TAAGTGCTGA AGGGAACGAA GAGTGCAAAA AAAGAGATAT 83560 .......... .......... .......... .......... .......... .......... 506 TATGCACTTC TCTCATGAGC TTCAGTCGTC TTAGCTTTAT CTGCTTTATA TTTTATGCGA 83620 .......... .......... .......... .......... .......... .......... 506 TGCATCTTAC TTTTATATTC ATTTGAACCA TGCCCTGTAG ATTTCCTTAT ATCTGC 83676 |||||||||| |||||| .......... .......... .......... .......... ATTTCCTTAT ATCTGC 522 hqPGS_C08HBa0165B06.1+_SGN-E329759+ (81821 82091,82381 82407,83048 83120,83232 83366,83661 83676) ******************************************************************************** EST sequence 57 +strand 534 n (File: SGN-E251505+) 1 TTTTGAGGTC CATTGTGACT GCAAAAACTA CCGCCATTGC TGCTGCTATT CCAGCTGCTG 61 CTTTTGCTGT TTCTTCTATT TCTTCTTCTT CGCAGTTTGA ACGTCCGTTG AAAAATCTAA 121 AATTTGGCTC AATTTCTAGT TCGAATTCGA TTCTCCAATT AAGCTTCGCG AAGAATCTAC 181 AAAAAAAGAG TCCTCCTTCA GCTCTTCATA TGGAAACGCA TTCTTCAAAT CACCAAACTT 241 CCTCCGATAA TGGAGTCGTT TTGCCTGAGT TGCTGACAGA GTTTATGGTG GATATGTCGT 301 GTCAAGGCTG TGTTAGTGCT GTCAAGAGCA AATTGCAAAC CGTAGAAGGA GTCAAGAATG 361 TAGATGTGGA TCTTGATAAT CAAGTAGTGA GAATTCTTGG ATCTTCACCT GTGAAGACAA 421 TGACTGAAGC CTTGGAGCAA ACAGGTCGAA AAGCCCGTCT GATTGGGCAA GGAGTACCGG 481 ATGATTTCCT TATATCTGCT GCCGTTGCCG AATTCAAAGG ACCAGATATT TTTG Predicted gene structure (within gDNA segment 81244 to 84321): Exon 1 81844 82091 ( 248 n); cDNA 1 248 ( 248 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 249 275 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 276 348 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 349 483 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 1.00) Exon 5 83661 83711 ( 51 n); cDNA 484 534 ( 51 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E251505+ 1.000 534 1.000 C PGS_C08HBa0165B06.1+_SGN-E251505+ (81844 82091,82381 82407,83048 83120,83232 83366,83661 83711) Alignment (genomic DNA sequence = upper lines): TTTTGAGGTC CATTGTGACT GCAAAAACTA CCGCCATTGC TGCTGCTATT CCAGCTGCTG 81903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGAGGTC CATTGTGACT GCAAAAACTA CCGCCATTGC TGCTGCTATT CCAGCTGCTG 60 CTTTTGCTGT TTCTTCTATT TCTTCTTCTT CGCAGTTTGA ACGTCCGTTG AAAAATCTAA 81963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTGCTGT TTCTTCTATT TCTTCTTCTT CGCAGTTTGA ACGTCCGTTG AAAAATCTAA 120 AATTTGGCTC AATTTCTAGT TCGAATTCGA TTCTCCAATT AAGCTTCGCG AAGAATCTAC 82023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTGGCTC AATTTCTAGT TCGAATTCGA TTCTCCAATT AAGCTTCGCG AAGAATCTAC 180 AAAAAAAGAG TCCTCCTTCA GCTCTTCATA TGGAAACGCA TTCTTCAAAT CACCAAACTT 82083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAAGAG TCCTCCTTCA GCTCTTCATA TGGAAACGCA TTCTTCAAAT CACCAAACTT 240 CCTCCGATGT AATAATTTTA TCCTTCAGCT CTTTTATCTT TTTGTTGATT TTTTGAATTA 82143 |||||||| CCTCCGAT.. .......... .......... .......... .......... .......... 248 TTTGGAGAAT CTTACAGGGG TCAATTGGTT GGCTAATTGA ATTTTCACCT ATTGGCGAGG 82203 .......... .......... .......... .......... .......... .......... 248 ATTTAGGGTT TAGGGAGGTC TTACTTGTAT TGCAATTCTT CACTACTAAA TTTTAGATCC 82263 .......... .......... .......... .......... .......... .......... 248 ATCTCTTTTT TTTAATCCAG AATGAAAAAC TAATATGTTT AATTTTTTTT TGTTTGTAAA 82323 .......... .......... .......... .......... .......... .......... 248 TTTGGCAATA AATGGATGCT ATTGTTCTAA TTGGGTTATG TGATTTTTCG TTTGCAGAAT 82383 ||| .......... .......... .......... .......... .......... .......AAT 251 GGAGTCGTTT TGCCTGAGTT GCTGGTAAGT TTTTTCTCAG GAAAAAAAAA ATCTCTGTTA 82443 |||||||||| |||||||||| |||| GGAGTCGTTT TGCCTGAGTT GCTG...... .......... .......... .......... 275 TTTTTGTTTG GAGGAGAAAT GAGGAAATTT CTGGTGTTTT TTTATTGCAC ATTGGAAGCT 82503 .......... .......... .......... .......... .......... .......... 275 GTACAATAAA TAGGATTCTT GTACTTATAA AGAGTCTAGT AACTTTGTAC TTTGGATAGT 82563 .......... .......... .......... .......... .......... .......... 275 ACTATGAGTA GTACAACATT TGATGAAAGG AGGAGATGTA CACTTAAGAG TAGTATTATA 82623 .......... .......... .......... .......... .......... .......... 275 TCAATCTTTT TCGCCTCTGC TTTAGGTAGA TCAACTAACA TCTTCTGTTA GAAGAGAGGA 82683 .......... .......... .......... .......... .......... .......... 275 CAAGAGCCCT TATATAATGC TACTACAAAC AATATTCATT TGTCAATAAA AAATCTGTAG 82743 .......... .......... .......... .......... .......... .......... 275 CTCTGCTTTT GAATTATATT GCCGATAACA CGTGACGGTT TTTTCTCCTT GATCAATTGC 82803 .......... .......... .......... .......... .......... .......... 275 TGAGGTAAAT TGATTGTGCT GGTTGTAATG TGATTAGTGA GTGTATCAGA GATGATGACT 82863 .......... .......... .......... .......... .......... .......... 275 TTTAACGGGA GGGGGGTATC TTTTAATCTT GATGGCTTAA TGTAGCCCAT TTTGTTGGTT 82923 .......... .......... .......... .......... .......... .......... 275 ATTGAAGGTT TAGTTTGGGG GGCTTATGTT TGTTTCTATT GGTTTCTTTG TGAGTTGATA 82983 .......... .......... .......... .......... .......... .......... 275 TATTATGTTG CACATTGTTG TTTTTTTCCA CGTTAAACTG ATCATATTGA CAAATTGGTG 83043 .......... .......... .......... .......... .......... .......... 275 ACAGACAGAG TTTATGGTGG ATATGTCGTG TCAAGGCTGT GTTAGTGCTG TCAAGAGCAA 83103 |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ....ACAGAG TTTATGGTGG ATATGTCGTG TCAAGGCTGT GTTAGTGCTG TCAAGAGCAA 331 ATTGCAAACC GTAGAAGGTA TATGCTAAGA AAAAAGAAGA AGAGAGAAAC CATGCCCTGT 83163 |||||||||| ||||||| ATTGCAAACC GTAGAAG... .......... .......... .......... .......... 348 AATGGGGCTT TATTTTTAAC TTCCTCATTT GTTTTGGTGT TGAAAGAGAT CTTTTATGTG 83223 .......... .......... .......... .......... .......... .......... 348 GCTTTTAGGA GTCAAGAATG TAGATGTGGA TCTTGATAAT CAAGTAGTGA GAATTCTTGG 83283 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ........GA GTCAAGAATG TAGATGTGGA TCTTGATAAT CAAGTAGTGA GAATTCTTGG 400 ATCTTCACCT GTGAAGACAA TGACTGAAGC CTTGGAGCAA ACAGGTCGAA AAGCCCGTCT 83343 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTCACCT GTGAAGACAA TGACTGAAGC CTTGGAGCAA ACAGGTCGAA AAGCCCGTCT 460 GATTGGGCAA GGAGTACCGG ATGGTATGTT CCGATCTTAT CTAATTGCAT CTGTCATGTT 83403 |||||||||| |||||||||| ||| GATTGGGCAA GGAGTACCGG ATG....... .......... .......... .......... 483 TCCTAAGTTA GTATTATAGA AAATTTGTGA AGCATTATGT CTTCACATCT CTGGCTATGT 83463 .......... .......... .......... .......... .......... .......... 483 TAAAGAGGAT GAGCAGAAGT AAAGCATACT TATGATTATA GTGTGTAATG GCCTTCTTAA 83523 .......... .......... .......... .......... .......... .......... 483 GTGCTGAAGG GAACGAAGAG TGCAAAAAAA GAGATATTAT GCACTTCTCT CATGAGCTTC 83583 .......... .......... .......... .......... .......... .......... 483 AGTCGTCTTA GCTTTATCTG CTTTATATTT TATGCGATGC ATCTTACTTT TATATTCATT 83643 .......... .......... .......... .......... .......... .......... 483 TGAACCATGC CCTGTAGATT TCCTTATATC TGCTGCCGTT GCCGAATTCA AAGGACCAGA 83703 ||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .......ATT TCCTTATATC TGCTGCCGTT GCCGAATTCA AAGGACCAGA 526 TATTTTTG 83711 |||||||| TATTTTTG 534 hqPGS_C08HBa0165B06.1+_SGN-E251505+ (81844 82091,82381 82407,83048 83120,83232 83366,83661 83711) ******************************************************************************** EST sequence 18 +strand 564 n (File: SGN-E306307+) 1 TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 61 GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 121 TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 181 AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 241 AATGGAGTCG TTTTGCCTGA GTTGCTGACA GAGTTTATGG TGGATATGTC GTGTCAAGGC 301 TGTGTTAGTG CTGTCAAGAG CAAATTGCAA ACCGTAGAAG GAGTCAAGAA TGTAGATGTG 361 GATCTTGATA ATCAAGTAGT GAGAATTCTT GGATCTTCAC CTGTGAAGAC AATGACTGAA 421 GCCTTGGAGC AAACAGGTCG AAAAGCCCGT CTGATTGGGC AAGGAGTACC GGATGATTTC 481 CTTATATCTG CTGCCGTTGC CGAATTCAAA GGACCAGATA TTTTTGGTGT TGTTCGCTTG 541 GCTCAAGTCA ATATGGAATT AACT Predicted gene structure (within gDNA segment 81252 to 84359): Exon 1 81852 82091 ( 240 n); cDNA 1 240 ( 240 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 241 267 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 268 340 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 341 475 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 1.00) Exon 5 83661 83749 ( 89 n); cDNA 476 564 ( 89 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E306307+ 1.000 564 1.000 C PGS_C08HBa0165B06.1+_SGN-E306307+ (81852 82091,82381 82407,83048 83120,83232 83366,83661 83749) Alignment (genomic DNA sequence = upper lines): TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 81911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATTGTGA CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT 60 GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 81971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTTCTA TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC 120 TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 82031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTTCTA GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG 180 AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 82091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCCTCCTT CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT 240 GTAATAATTT TATCCTTCAG CTCTTTTATC TTTTTGTTGA TTTTTTGAAT TATTTGGAGA 82151 .......... .......... .......... .......... .......... .......... 240 ATCTTACAGG GGTCAATTGG TTGGCTAATT GAATTTTCAC CTATTGGCGA GGATTTAGGG 82211 .......... .......... .......... .......... .......... .......... 240 TTTAGGGAGG TCTTACTTGT ATTGCAATTC TTCACTACTA AATTTTAGAT CCATCTCTTT 82271 .......... .......... .......... .......... .......... .......... 240 TTTTTAATCC AGAATGAAAA ACTAATATGT TTAATTTTTT TTTGTTTGTA AATTTGGCAA 82331 .......... .......... .......... .......... .......... .......... 240 TAAATGGATG CTATTGTTCT AATTGGGTTA TGTGATTTTT CGTTTGCAGA ATGGAGTCGT 82391 | |||||||||| .......... .......... .......... .......... .........A ATGGAGTCGT 251 TTTGCCTGAG TTGCTGGTAA GTTTTTTCTC AGGAAAAAAA AAATCTCTGT TATTTTTGTT 82451 |||||||||| |||||| TTTGCCTGAG TTGCTG.... .......... .......... .......... .......... 267 TGGAGGAGAA ATGAGGAAAT TTCTGGTGTT TTTTTATTGC ACATTGGAAG CTGTACAATA 82511 .......... .......... .......... .......... .......... .......... 267 AATAGGATTC TTGTACTTAT AAAGAGTCTA GTAACTTTGT ACTTTGGATA GTACTATGAG 82571 .......... .......... .......... .......... .......... .......... 267 TAGTACAACA TTTGATGAAA GGAGGAGATG TACACTTAAG AGTAGTATTA TATCAATCTT 82631 .......... .......... .......... .......... .......... .......... 267 TTTCGCCTCT GCTTTAGGTA GATCAACTAA CATCTTCTGT TAGAAGAGAG GACAAGAGCC 82691 .......... .......... .......... .......... .......... .......... 267 CTTATATAAT GCTACTACAA ACAATATTCA TTTGTCAATA AAAAATCTGT AGCTCTGCTT 82751 .......... .......... .......... .......... .......... .......... 267 TTGAATTATA TTGCCGATAA CACGTGACGG TTTTTTCTCC TTGATCAATT GCTGAGGTAA 82811 .......... .......... .......... .......... .......... .......... 267 ATTGATTGTG CTGGTTGTAA TGTGATTAGT GAGTGTATCA GAGATGATGA CTTTTAACGG 82871 .......... .......... .......... .......... .......... .......... 267 GAGGGGGGTA TCTTTTAATC TTGATGGCTT AATGTAGCCC ATTTTGTTGG TTATTGAAGG 82931 .......... .......... .......... .......... .......... .......... 267 TTTAGTTTGG GGGGCTTATG TTTGTTTCTA TTGGTTTCTT TGTGAGTTGA TATATTATGT 82991 .......... .......... .......... .......... .......... .......... 267 TGCACATTGT TGTTTTTTTC CACGTTAAAC TGATCATATT GACAAATTGG TGACAGACAG 83051 |||| .......... .......... .......... .......... .......... ......ACAG 271 AGTTTATGGT GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA 83111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTATGGT GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA 331 CCGTAGAAGG TATATGCTAA GAAAAAAGAA GAAGAGAGAA ACCATGCCCT GTAATGGGGC 83171 ||||||||| CCGTAGAAG. .......... .......... .......... .......... .......... 340 TTTATTTTTA ACTTCCTCAT TTGTTTTGGT GTTGAAAGAG ATCTTTTATG TGGCTTTTAG 83231 .......... .......... .......... .......... .......... .......... 340 GAGTCAAGAA TGTAGATGTG GATCTTGATA ATCAAGTAGT GAGAATTCTT GGATCTTCAC 83291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCAAGAA TGTAGATGTG GATCTTGATA ATCAAGTAGT GAGAATTCTT GGATCTTCAC 400 CTGTGAAGAC AATGACTGAA GCCTTGGAGC AAACAGGTCG AAAAGCCCGT CTGATTGGGC 83351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGAAGAC AATGACTGAA GCCTTGGAGC AAACAGGTCG AAAAGCCCGT CTGATTGGGC 460 AAGGAGTACC GGATGGTATG TTCCGATCTT ATCTAATTGC ATCTGTCATG TTTCCTAAGT 83411 |||||||||| ||||| AAGGAGTACC GGATG..... .......... .......... .......... .......... 475 TAGTATTATA GAAAATTTGT GAAGCATTAT GTCTTCACAT CTCTGGCTAT GTTAAAGAGG 83471 .......... .......... .......... .......... .......... .......... 475 ATGAGCAGAA GTAAAGCATA CTTATGATTA TAGTGTGTAA TGGCCTTCTT AAGTGCTGAA 83531 .......... .......... .......... .......... .......... .......... 475 GGGAACGAAG AGTGCAAAAA AAGAGATATT ATGCACTTCT CTCATGAGCT TCAGTCGTCT 83591 .......... .......... .......... .......... .......... .......... 475 TAGCTTTATC TGCTTTATAT TTTATGCGAT GCATCTTACT TTTATATTCA TTTGAACCAT 83651 .......... .......... .......... .......... .......... .......... 475 GCCCTGTAGA TTTCCTTATA TCTGCTGCCG TTGCCGAATT CAAAGGACCA GATATTTTTG 83711 | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .........A TTTCCTTATA TCTGCTGCCG TTGCCGAATT CAAAGGACCA GATATTTTTG 526 GTGTTGTTCG CTTGGCTCAA GTCAATATGG AATTAACT 83749 |||||||||| |||||||||| |||||||||| |||||||| GTGTTGTTCG CTTGGCTCAA GTCAATATGG AATTAACT 564 hqPGS_C08HBa0165B06.1+_SGN-E306307+ (81852 82091,82381 82407,83048 83120,83232 83366,83661 83749) ******************************************************************************** EST sequence 100 +strand 775 n (File: SGN-E549093+) 1 GTGACTGCAA AAACTACCGC CATTGCTGCT GCTATTCCAG CTGCTGCTTT TGCTGTTTCT 61 TCTATTTCTT CTTCTTCGCA GTTTGAACGT CCGTTGAAAA ATCTAAAATT TGGCTCAATT 121 TCTAGTTCGA ATTCGATTCT CCAATTAAGC TTCGCGAAGA ATCTACAAAA AAAGAGTCCT 181 CCTTCAGCTC TTCATATGGA AACGCATTCT TCAAATCACC AAACTTCCTC CGATAATGGA 241 GTCGTTTTGC CTGAGTTGCT GACAGAGTTT ATGGTGGATA TGTCGTGTCA AGGCTGTGTT 301 AGTGCTGTCA AGAGCAAATT GCAAACCGTA GAAGGAGTCA AGAATGTAGA TGTGGATCTT 361 GATAATCAAG TAGTGAGAAT TCTTGGATCT TCACCTGTGA AGACAATGAC TGAAGCCTTG 421 GAGCAAACAG GTCGAAAAGC CCGTCTGATT GGGCAAGGAG TACCGGAATT AACTAGGATT 481 GAAGCAAACT TCAGTGGCCT GTCACCTGGG AAGCATGCTT GGTCTATTAA TGAATTTGGT 541 GATTTGACGA GGGGGGCAGC TAGTACTGGA AAATTGTACA GCCTACCACT CGGTGACCTG 601 GGAACACTGG ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG 661 AGAGTTGCTG ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC 721 CCAGGACTTA CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACA Predicted gene structure (within gDNA segment 81258 to 85163): Exon 1 81858 82091 ( 234 n); cDNA 1 234 ( 234 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 235 261 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 262 334 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 335 469 ( 135 n); score: 0.985 Intron 4 83367 83744 ( 378 n); Pd: 0.993 (s: 0.96), Pa: 0.000 (s: 1.00) Exon 5 83745 83860 ( 116 n); cDNA 470 585 ( 116 n); score: 1.000 Intron 5 83861 84363 ( 503 n); Pd: 0.981 (s: 1.00), Pa: 0.994 (s: 1.00) Exon 6 84364 84553 ( 190 n); cDNA 586 775 ( 190 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E549093+ 0.997 775 1.000 C PGS_C08HBa0165B06.1+_SGN-E549093+ (81858 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84553) Alignment (genomic DNA sequence = upper lines): GTGACTGCAA AAACTACCGC CATTGCTGCT GCTATTCCAG CTGCTGCTTT TGCTGTTTCT 81917 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACTGCAA AAACTACCGC CATTGCTGCT GCTATTCCAG CTGCTGCTTT TGCTGTTTCT 60 TCTATTTCTT CTTCTTCGCA GTTTGAACGT CCGTTGAAAA ATCTAAAATT TGGCTCAATT 81977 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATTTCTT CTTCTTCGCA GTTTGAACGT CCGTTGAAAA ATCTAAAATT TGGCTCAATT 120 TCTAGTTCGA ATTCGATTCT CCAATTAAGC TTCGCGAAGA ATCTACAAAA AAAGAGTCCT 82037 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTAGTTCGA ATTCGATTCT CCAATTAAGC TTCGCGAAGA ATCTACAAAA AAAGAGTCCT 180 CCTTCAGCTC TTCATATGGA AACGCATTCT TCAAATCACC AAACTTCCTC CGATGTAATA 82097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| CCTTCAGCTC TTCATATGGA AACGCATTCT TCAAATCACC AAACTTCCTC CGAT...... 234 ATTTTATCCT TCAGCTCTTT TATCTTTTTG TTGATTTTTT GAATTATTTG GAGAATCTTA 82157 .......... .......... .......... .......... .......... .......... 234 CAGGGGTCAA TTGGTTGGCT AATTGAATTT TCACCTATTG GCGAGGATTT AGGGTTTAGG 82217 .......... .......... .......... .......... .......... .......... 234 GAGGTCTTAC TTGTATTGCA ATTCTTCACT ACTAAATTTT AGATCCATCT CTTTTTTTTA 82277 .......... .......... .......... .......... .......... .......... 234 ATCCAGAATG AAAAACTAAT ATGTTTAATT TTTTTTTGTT TGTAAATTTG GCAATAAATG 82337 .......... .......... .......... .......... .......... .......... 234 GATGCTATTG TTCTAATTGG GTTATGTGAT TTTTCGTTTG CAGAATGGAG TCGTTTTGCC 82397 ||||||| |||||||||| .......... .......... .......... .......... ...AATGGAG TCGTTTTGCC 251 TGAGTTGCTG GTAAGTTTTT TCTCAGGAAA AAAAAAATCT CTGTTATTTT TGTTTGGAGG 82457 |||||||||| TGAGTTGCTG .......... .......... .......... .......... .......... 261 AGAAATGAGG AAATTTCTGG TGTTTTTTTA TTGCACATTG GAAGCTGTAC AATAAATAGG 82517 .......... .......... .......... .......... .......... .......... 261 ATTCTTGTAC TTATAAAGAG TCTAGTAACT TTGTACTTTG GATAGTACTA TGAGTAGTAC 82577 .......... .......... .......... .......... .......... .......... 261 AACATTTGAT GAAAGGAGGA GATGTACACT TAAGAGTAGT ATTATATCAA TCTTTTTCGC 82637 .......... .......... .......... .......... .......... .......... 261 CTCTGCTTTA GGTAGATCAA CTAACATCTT CTGTTAGAAG AGAGGACAAG AGCCCTTATA 82697 .......... .......... .......... .......... .......... .......... 261 TAATGCTACT ACAAACAATA TTCATTTGTC AATAAAAAAT CTGTAGCTCT GCTTTTGAAT 82757 .......... .......... .......... .......... .......... .......... 261 TATATTGCCG ATAACACGTG ACGGTTTTTT CTCCTTGATC AATTGCTGAG GTAAATTGAT 82817 .......... .......... .......... .......... .......... .......... 261 TGTGCTGGTT GTAATGTGAT TAGTGAGTGT ATCAGAGATG ATGACTTTTA ACGGGAGGGG 82877 .......... .......... .......... .......... .......... .......... 261 GGTATCTTTT AATCTTGATG GCTTAATGTA GCCCATTTTG TTGGTTATTG AAGGTTTAGT 82937 .......... .......... .......... .......... .......... .......... 261 TTGGGGGGCT TATGTTTGTT TCTATTGGTT TCTTTGTGAG TTGATATATT ATGTTGCACA 82997 .......... .......... .......... .......... .......... .......... 261 TTGTTGTTTT TTTCCACGTT AAACTGATCA TATTGACAAA TTGGTGACAG ACAGAGTTTA 83057 |||||||||| .......... .......... .......... .......... .......... ACAGAGTTTA 271 TGGTGGATAT GTCGTGTCAA GGCTGTGTTA GTGCTGTCAA GAGCAAATTG CAAACCGTAG 83117 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGGATAT GTCGTGTCAA GGCTGTGTTA GTGCTGTCAA GAGCAAATTG CAAACCGTAG 331 AAGGTATATG CTAAGAAAAA AGAAGAAGAG AGAAACCATG CCCTGTAATG GGGCTTTATT 83177 ||| AAG....... .......... .......... .......... .......... .......... 334 TTTAACTTCC TCATTTGTTT TGGTGTTGAA AGAGATCTTT TATGTGGCTT TTAGGAGTCA 83237 |||||| .......... .......... .......... .......... .......... ....GAGTCA 340 AGAATGTAGA TGTGGATCTT GATAATCAAG TAGTGAGAAT TCTTGGATCT TCACCTGTGA 83297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGTAGA TGTGGATCTT GATAATCAAG TAGTGAGAAT TCTTGGATCT TCACCTGTGA 400 AGACAATGAC TGAAGCCTTG GAGCAAACAG GTCGAAAAGC CCGTCTGATT GGGCAAGGAG 83357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACAATGAC TGAAGCCTTG GAGCAAACAG GTCGAAAAGC CCGTCTGATT GGGCAAGGAG 460 TACCGGATGG TATGTTCCGA TCTTATCTAA TTGCATCTGT CATGTTTCCT AAGTTAGTAT 83417 ||||||| TACCGGAAT. .......... .......... .......... .......... .......... 469 TATAGAAAAT TTGTGAAGCA TTATGTCTTC ACATCTCTGG CTATGTTAAA GAGGATGAGC 83477 .......... .......... .......... .......... .......... .......... 469 AGAAGTAAAG CATACTTATG ATTATAGTGT GTAATGGCCT TCTTAAGTGC TGAAGGGAAC 83537 .......... .......... .......... .......... .......... .......... 469 GAAGAGTGCA AAAAAAGAGA TATTATGCAC TTCTCTCATG AGCTTCAGTC GTCTTAGCTT 83597 .......... .......... .......... .......... .......... .......... 469 TATCTGCTTT ATATTTTATG CGATGCATCT TACTTTTATA TTCATTTGAA CCATGCCCTG 83657 .......... .......... .......... .......... .......... .......... 469 TAGATTTCCT TATATCTGCT GCCGTTGCCG AATTCAAAGG ACCAGATATT TTTGGTGTTG 83717 .......... .......... .......... .......... .......... .......... 469 TTCGCTTGGC TCAAGTCAAT ATGGAATTAA CTAGGATTGA AGCAAACTTC AGTGGCCTGT 83777 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......TAA CTAGGATTGA AGCAAACTTC AGTGGCCTGT 502 CACCTGGGAA GCATGCTTGG TCTATTAATG AATTTGGTGA TTTGACGAGG GGGGCAGCTA 83837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCTGGGAA GCATGCTTGG TCTATTAATG AATTTGGTGA TTTGACGAGG GGGGCAGCTA 562 GTACTGGAAA ATTGTACAGC CTAGTAAGTA ACACGCAAAA GAACATTTTA TTTATGTTGA 83897 |||||||||| |||||||||| ||| GTACTGGAAA ATTGTACAGC CTA....... .......... .......... .......... 585 ATATGTTGTA CTATCTTCTT TCTACGAACC TTTGTTTCTT GGGGGCATGG ATTCTGCAAT 83957 .......... .......... .......... .......... .......... .......... 585 ATACTTGCAT TGAGAAAGAG AGAATCAGGA TCCATAATAT TAATTATGCA ATCATGTTTC 84017 .......... .......... .......... .......... .......... .......... 585 ATTTAATCTC ACTCAAGGAT GCTTGAAGTG TTTGGAGTAT GATATAAATG CTTTTAAGTG 84077 .......... .......... .......... .......... .......... .......... 585 GTCCTTTGCC ATATGAAATG CATCTAATAC CATGCTGTTA GTTATGGAAT CGTAACTGTC 84137 .......... .......... .......... .......... .......... .......... 585 TGGATACTAG ATAACATTTG TCAAGGACTG TGAAACTTTT CCTCTCTCTT TGTCCTCTGA 84197 .......... .......... .......... .......... .......... .......... 585 AAGTGAAATA AGCATCTATC AATTGTAATT TTCCTTTTGT TGGACAGTCA AAAGGAGACA 84257 .......... .......... .......... .......... .......... .......... 585 AATATATGGA TAAAGTTCTA ATGAATGATT GGTTTACTTA TGTCTAATAT ATGTTGCACC 84317 .......... .......... .......... .......... .......... .......... 585 AGACAGACTA TTAACTGCAT TTCTGATGTG TTTTTCCATC TTTCAGCCAC TCGGTGACCT 84377 |||| |||||||||| .......... .......... .......... .......... ......CCAC TCGGTGACCT 599 GGGAACACTG GATGTTGACG AGAAAGGAGA GGCATTTTAT TCCGGTCCTA AAGAGAAGCT 84437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAACACTG GATGTTGACG AGAAAGGAGA GGCATTTTAT TCCGGTCCTA AAGAGAAGCT 659 GAGAGTTGCT GACCTGATTG GGAGAGCTAT TGCTGTATAT GCTACTGAAG ATAAATCAGA 84497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGTTGCT GACCTGATTG GGAGAGCTAT TGCTGTATAT GCTACTGAAG ATAAATCAGA 719 CCCAGGACTT ACAGCAGCAG TGATAGCTAG AAGTGCCGGG GTTGGTGAGA ACTACA 84553 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| CCCAGGACTT ACAGCAGCAG TGATAGCTAG AAGTGCCGGG GTTGGTGAGA ACTACA 775 hqPGS_C08HBa0165B06.1+_SGN-E549093+ (81858 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84553) ******************************************************************************** EST sequence 66 +strand 703 n (File: SGN-E306718+) 1 TGACTGCAAA TTCTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCGGGTTCTT 61 CTATTTCTGG TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 121 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 181 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATAATGGAG 241 TCGTTTTGCC TGAGTTGCTG ACAGAGTTTA TGGTGGATAT GTCGTGTCAA GGCTGTGTTA 301 GTGCTGTCAA GAGCAAATTG CAAACCGTAG AAGGAGTCAA GAATGTAGAT GTGGATCTTG 361 ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA GACAATGACT GAAGCCTTGG 421 AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT ACCGGAATTA ACTAGGATTG 481 AAGCAAACTT CAGTGGCCTG TCACCTGGGA AGCATGCTTG GTCTATTAAT GAATTTGGTG 541 ATTTGACGAG GGGGGCAGCT AGTACTGGAA AATTGTACAG CCTACCACTC GGTGACCTGG 601 GAACACTGGA TGTTGACGAG AAAGGAGAGG CATTTTATTC CGGTCCTAAA GAGAAGCTGA 661 GAGTTGCTGA CCTGATTGGG AGAGCTATTG CTGTATATGC TAC Predicted gene structure (within gDNA segment 81151 to 85092): Exon 1 81859 82091 ( 233 n); cDNA 1 233 ( 233 n); score: 0.974 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 234 260 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 261 333 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 334 468 ( 135 n); score: 0.985 Intron 4 83367 83744 ( 378 n); Pd: 0.993 (s: 0.96), Pa: 0.000 (s: 1.00) Exon 5 83745 83860 ( 116 n); cDNA 469 584 ( 116 n); score: 1.000 Intron 5 83861 84363 ( 503 n); Pd: 0.981 (s: 1.00), Pa: 0.994 (s: 1.00) Exon 6 84364 84482 ( 119 n); cDNA 585 703 ( 119 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E306718+ 0.988 703 1.000 C PGS_C08HBa0165B06.1+_SGN-E306718+ (81859 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84482) Alignment (genomic DNA sequence = upper lines): TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 81918 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| || | ||||| TGACTGCAAA TTCTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCGGGTTCTT 60 CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 81978 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATTTCTGG TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 120 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 82038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 180 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATGTAATAA 82098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GAT....... 233 TTTTATCCTT CAGCTCTTTT ATCTTTTTGT TGATTTTTTG AATTATTTGG AGAATCTTAC 82158 .......... .......... .......... .......... .......... .......... 233 AGGGGTCAAT TGGTTGGCTA ATTGAATTTT CACCTATTGG CGAGGATTTA GGGTTTAGGG 82218 .......... .......... .......... .......... .......... .......... 233 AGGTCTTACT TGTATTGCAA TTCTTCACTA CTAAATTTTA GATCCATCTC TTTTTTTTAA 82278 .......... .......... .......... .......... .......... .......... 233 TCCAGAATGA AAAACTAATA TGTTTAATTT TTTTTTGTTT GTAAATTTGG CAATAAATGG 82338 .......... .......... .......... .......... .......... .......... 233 ATGCTATTGT TCTAATTGGG TTATGTGATT TTTCGTTTGC AGAATGGAGT CGTTTTGCCT 82398 |||||||| |||||||||| .......... .......... .......... .......... ..AATGGAGT CGTTTTGCCT 251 GAGTTGCTGG TAAGTTTTTT CTCAGGAAAA AAAAAATCTC TGTTATTTTT GTTTGGAGGA 82458 ||||||||| GAGTTGCTG. .......... .......... .......... .......... .......... 260 GAAATGAGGA AATTTCTGGT GTTTTTTTAT TGCACATTGG AAGCTGTACA ATAAATAGGA 82518 .......... .......... .......... .......... .......... .......... 260 TTCTTGTACT TATAAAGAGT CTAGTAACTT TGTACTTTGG ATAGTACTAT GAGTAGTACA 82578 .......... .......... .......... .......... .......... .......... 260 ACATTTGATG AAAGGAGGAG ATGTACACTT AAGAGTAGTA TTATATCAAT CTTTTTCGCC 82638 .......... .......... .......... .......... .......... .......... 260 TCTGCTTTAG GTAGATCAAC TAACATCTTC TGTTAGAAGA GAGGACAAGA GCCCTTATAT 82698 .......... .......... .......... .......... .......... .......... 260 AATGCTACTA CAAACAATAT TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT 82758 .......... .......... .......... .......... .......... .......... 260 ATATTGCCGA TAACACGTGA CGGTTTTTTC TCCTTGATCA ATTGCTGAGG TAAATTGATT 82818 .......... .......... .......... .......... .......... .......... 260 GTGCTGGTTG TAATGTGATT AGTGAGTGTA TCAGAGATGA TGACTTTTAA CGGGAGGGGG 82878 .......... .......... .......... .......... .......... .......... 260 GTATCTTTTA ATCTTGATGG CTTAATGTAG CCCATTTTGT TGGTTATTGA AGGTTTAGTT 82938 .......... .......... .......... .......... .......... .......... 260 TGGGGGGCTT ATGTTTGTTT CTATTGGTTT CTTTGTGAGT TGATATATTA TGTTGCACAT 82998 .......... .......... .......... .......... .......... .......... 260 TGTTGTTTTT TTCCACGTTA AACTGATCAT ATTGACAAAT TGGTGACAGA CAGAGTTTAT 83058 | |||||||||| .......... .......... .......... .......... .........A CAGAGTTTAT 271 GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 83118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 331 AGGTATATGC TAAGAAAAAA GAAGAAGAGA GAAACCATGC CCTGTAATGG GGCTTTATTT 83178 || AG........ .......... .......... .......... .......... .......... 333 TTAACTTCCT CATTTGTTTT GGTGTTGAAA GAGATCTTTT ATGTGGCTTT TAGGAGTCAA 83238 ||||||| .......... .......... .......... .......... .......... ...GAGTCAA 340 GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 83298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 400 GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 83358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 460 ACCGGATGGT ATGTTCCGAT CTTATCTAAT TGCATCTGTC ATGTTTCCTA AGTTAGTATT 83418 |||||| ACCGGAAT.. .......... .......... .......... .......... .......... 468 ATAGAAAATT TGTGAAGCAT TATGTCTTCA CATCTCTGGC TATGTTAAAG AGGATGAGCA 83478 .......... .......... .......... .......... .......... .......... 468 GAAGTAAAGC ATACTTATGA TTATAGTGTG TAATGGCCTT CTTAAGTGCT GAAGGGAACG 83538 .......... .......... .......... .......... .......... .......... 468 AAGAGTGCAA AAAAAGAGAT ATTATGCACT TCTCTCATGA GCTTCAGTCG TCTTAGCTTT 83598 .......... .......... .......... .......... .......... .......... 468 ATCTGCTTTA TATTTTATGC GATGCATCTT ACTTTTATAT TCATTTGAAC CATGCCCTGT 83658 .......... .......... .......... .......... .......... .......... 468 AGATTTCCTT ATATCTGCTG CCGTTGCCGA ATTCAAAGGA CCAGATATTT TTGGTGTTGT 83718 .......... .......... .......... .......... .......... .......... 468 TCGCTTGGCT CAAGTCAATA TGGAATTAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC 83778 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......TAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC 502 ACCTGGGAAG CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG 83838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTGGGAAG CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG 562 TACTGGAAAA TTGTACAGCC TAGTAAGTAA CACGCAAAAG AACATTTTAT TTATGTTGAA 83898 |||||||||| |||||||||| || TACTGGAAAA TTGTACAGCC TA........ .......... .......... .......... 584 TATGTTGTAC TATCTTCTTT CTACGAACCT TTGTTTCTTG GGGGCATGGA TTCTGCAATA 83958 .......... .......... .......... .......... .......... .......... 584 TACTTGCATT GAGAAAGAGA GAATCAGGAT CCATAATATT AATTATGCAA TCATGTTTCA 84018 .......... .......... .......... .......... .......... .......... 584 TTTAATCTCA CTCAAGGATG CTTGAAGTGT TTGGAGTATG ATATAAATGC TTTTAAGTGG 84078 .......... .......... .......... .......... .......... .......... 584 TCCTTTGCCA TATGAAATGC ATCTAATACC ATGCTGTTAG TTATGGAATC GTAACTGTCT 84138 .......... .......... .......... .......... .......... .......... 584 GGATACTAGA TAACATTTGT CAAGGACTGT GAAACTTTTC CTCTCTCTTT GTCCTCTGAA 84198 .......... .......... .......... .......... .......... .......... 584 AGTGAAATAA GCATCTATCA ATTGTAATTT TCCTTTTGTT GGACAGTCAA AAGGAGACAA 84258 .......... .......... .......... .......... .......... .......... 584 ATATATGGAT AAAGTTCTAA TGAATGATTG GTTTACTTAT GTCTAATATA TGTTGCACCA 84318 .......... .......... .......... .......... .......... .......... 584 GACAGACTAT TAACTGCATT TCTGATGTGT TTTTCCATCT TTCAGCCACT CGGTGACCTG 84378 ||||| |||||||||| .......... .......... .......... .......... .....CCACT CGGTGACCTG 599 GGAACACTGG ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG 84438 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACACTGG ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG 659 AGAGTTGCTG ACCTGATTGG GAGAGCTATT GCTGTATATG CTAC 84482 |||||||||| |||||||||| |||||||||| |||||||||| |||| AGAGTTGCTG ACCTGATTGG GAGAGCTATT GCTGTATATG CTAC 703 hqPGS_C08HBa0165B06.1+_SGN-E306718+ (81859 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84482) ******************************************************************************** EST sequence 74 +strand 483 n (File: SGN-E257746+) 1 TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 61 CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 121 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 181 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATAATGGAG 241 TCGTTTTGCC TGAGTTGCTG ACAGAGTTTA TGGTGGATAT GTCGTGTCAA GGCTGTGTTA 301 GTGCTGTCAA GAGCAAATTG CAAACCGTAG AAGGAGTCAA GAATGTAGAT GTGGATCTTG 361 ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA GACAATGACT GAAGCCTTGG 421 AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT ACCGGATGAT TTCCTTATAT 481 CTG Predicted gene structure (within gDNA segment 81259 to 84126): Exon 1 81859 82091 ( 233 n); cDNA 1 233 ( 233 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 234 260 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 261 333 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 334 468 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 0) Exon 5 83661 83675 ( 15 n); cDNA 469 483 ( 15 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E257746+ 1.000 483 1.000 C PGS_C08HBa0165B06.1+_SGN-E257746+ (81859 82091,82381 82407,83048 83120,83232 83366,83661 83675) Alignment (genomic DNA sequence = upper lines): TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 81918 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 60 CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 81978 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 120 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 82038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 180 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATGTAATAA 82098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GAT....... 233 TTTTATCCTT CAGCTCTTTT ATCTTTTTGT TGATTTTTTG AATTATTTGG AGAATCTTAC 82158 .......... .......... .......... .......... .......... .......... 233 AGGGGTCAAT TGGTTGGCTA ATTGAATTTT CACCTATTGG CGAGGATTTA GGGTTTAGGG 82218 .......... .......... .......... .......... .......... .......... 233 AGGTCTTACT TGTATTGCAA TTCTTCACTA CTAAATTTTA GATCCATCTC TTTTTTTTAA 82278 .......... .......... .......... .......... .......... .......... 233 TCCAGAATGA AAAACTAATA TGTTTAATTT TTTTTTGTTT GTAAATTTGG CAATAAATGG 82338 .......... .......... .......... .......... .......... .......... 233 ATGCTATTGT TCTAATTGGG TTATGTGATT TTTCGTTTGC AGAATGGAGT CGTTTTGCCT 82398 |||||||| |||||||||| .......... .......... .......... .......... ..AATGGAGT CGTTTTGCCT 251 GAGTTGCTGG TAAGTTTTTT CTCAGGAAAA AAAAAATCTC TGTTATTTTT GTTTGGAGGA 82458 ||||||||| GAGTTGCTG. .......... .......... .......... .......... .......... 260 GAAATGAGGA AATTTCTGGT GTTTTTTTAT TGCACATTGG AAGCTGTACA ATAAATAGGA 82518 .......... .......... .......... .......... .......... .......... 260 TTCTTGTACT TATAAAGAGT CTAGTAACTT TGTACTTTGG ATAGTACTAT GAGTAGTACA 82578 .......... .......... .......... .......... .......... .......... 260 ACATTTGATG AAAGGAGGAG ATGTACACTT AAGAGTAGTA TTATATCAAT CTTTTTCGCC 82638 .......... .......... .......... .......... .......... .......... 260 TCTGCTTTAG GTAGATCAAC TAACATCTTC TGTTAGAAGA GAGGACAAGA GCCCTTATAT 82698 .......... .......... .......... .......... .......... .......... 260 AATGCTACTA CAAACAATAT TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT 82758 .......... .......... .......... .......... .......... .......... 260 ATATTGCCGA TAACACGTGA CGGTTTTTTC TCCTTGATCA ATTGCTGAGG TAAATTGATT 82818 .......... .......... .......... .......... .......... .......... 260 GTGCTGGTTG TAATGTGATT AGTGAGTGTA TCAGAGATGA TGACTTTTAA CGGGAGGGGG 82878 .......... .......... .......... .......... .......... .......... 260 GTATCTTTTA ATCTTGATGG CTTAATGTAG CCCATTTTGT TGGTTATTGA AGGTTTAGTT 82938 .......... .......... .......... .......... .......... .......... 260 TGGGGGGCTT ATGTTTGTTT CTATTGGTTT CTTTGTGAGT TGATATATTA TGTTGCACAT 82998 .......... .......... .......... .......... .......... .......... 260 TGTTGTTTTT TTCCACGTTA AACTGATCAT ATTGACAAAT TGGTGACAGA CAGAGTTTAT 83058 | |||||||||| .......... .......... .......... .......... .........A CAGAGTTTAT 271 GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 83118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 331 AGGTATATGC TAAGAAAAAA GAAGAAGAGA GAAACCATGC CCTGTAATGG GGCTTTATTT 83178 || AG........ .......... .......... .......... .......... .......... 333 TTAACTTCCT CATTTGTTTT GGTGTTGAAA GAGATCTTTT ATGTGGCTTT TAGGAGTCAA 83238 ||||||| .......... .......... .......... .......... .......... ...GAGTCAA 340 GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 83298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 400 GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 83358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 460 ACCGGATGGT ATGTTCCGAT CTTATCTAAT TGCATCTGTC ATGTTTCCTA AGTTAGTATT 83418 |||||||| ACCGGATG.. .......... .......... .......... .......... .......... 468 ATAGAAAATT TGTGAAGCAT TATGTCTTCA CATCTCTGGC TATGTTAAAG AGGATGAGCA 83478 .......... .......... .......... .......... .......... .......... 468 GAAGTAAAGC ATACTTATGA TTATAGTGTG TAATGGCCTT CTTAAGTGCT GAAGGGAACG 83538 .......... .......... .......... .......... .......... .......... 468 AAGAGTGCAA AAAAAGAGAT ATTATGCACT TCTCTCATGA GCTTCAGTCG TCTTAGCTTT 83598 .......... .......... .......... .......... .......... .......... 468 ATCTGCTTTA TATTTTATGC GATGCATCTT ACTTTTATAT TCATTTGAAC CATGCCCTGT 83658 .......... .......... .......... .......... .......... .......... 468 AGATTTCCTT ATATCTG 83675 |||||||| ||||||| ..ATTTCCTT ATATCTG 483 hqPGS_C08HBa0165B06.1+_SGN-E257746+ (81859 82091,82381 82407,83048 83120,83232 83366,83661 83675) ******************************************************************************** EST sequence 122 +strand 451 n (File: SGN-E259961+) 1 TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 61 CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 121 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 181 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATAATGGAG 241 TCGTTTTGCC TGAGTTGCTG ACAGAGTTTA TGGTGGATAT GTCGTGTCAA GGCTGTGTTA 301 GTGCTGTCAA GAGCAAATTG CAAACCGTAG AAGGAGTCAA GAATGTAGAT GTGGATCTTG 361 ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA GACAATGACT GAAGCCTTGG 421 AGCAAACAGG GCGAAAAGCC CGTCTGATTG G Predicted gene structure (within gDNA segment 81259 to 83959): Exon 1 81859 82091 ( 233 n); cDNA 1 233 ( 233 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 234 260 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 261 333 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83349 ( 118 n); cDNA 334 451 ( 118 n); score: 0.992 MATCH C08HBa0165B06.1+ SGN-E259961+ 0.998 451 1.000 C PGS_C08HBa0165B06.1+_SGN-E259961+ (81859 82091,82381 82407,83048 83120,83232 83349) Alignment (genomic DNA sequence = upper lines): TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 81918 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACTGCAAA AACTACCGCC ATTGCTGCTG CTATTCCAGC TGCTGCTTTT GCTGTTTCTT 60 CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 81978 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATTTCTTC TTCTTCGCAG TTTGAACGTC CGTTGAAAAA TCTAAAATTT GGCTCAATTT 120 CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 82038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGTTCGAA TTCGATTCTC CAATTAAGCT TCGCGAAGAA TCTACAAAAA AAGAGTCCTC 180 CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GATGTAATAA 82098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CTTCAGCTCT TCATATGGAA ACGCATTCTT CAAATCACCA AACTTCCTCC GAT....... 233 TTTTATCCTT CAGCTCTTTT ATCTTTTTGT TGATTTTTTG AATTATTTGG AGAATCTTAC 82158 .......... .......... .......... .......... .......... .......... 233 AGGGGTCAAT TGGTTGGCTA ATTGAATTTT CACCTATTGG CGAGGATTTA GGGTTTAGGG 82218 .......... .......... .......... .......... .......... .......... 233 AGGTCTTACT TGTATTGCAA TTCTTCACTA CTAAATTTTA GATCCATCTC TTTTTTTTAA 82278 .......... .......... .......... .......... .......... .......... 233 TCCAGAATGA AAAACTAATA TGTTTAATTT TTTTTTGTTT GTAAATTTGG CAATAAATGG 82338 .......... .......... .......... .......... .......... .......... 233 ATGCTATTGT TCTAATTGGG TTATGTGATT TTTCGTTTGC AGAATGGAGT CGTTTTGCCT 82398 |||||||| |||||||||| .......... .......... .......... .......... ..AATGGAGT CGTTTTGCCT 251 GAGTTGCTGG TAAGTTTTTT CTCAGGAAAA AAAAAATCTC TGTTATTTTT GTTTGGAGGA 82458 ||||||||| GAGTTGCTG. .......... .......... .......... .......... .......... 260 GAAATGAGGA AATTTCTGGT GTTTTTTTAT TGCACATTGG AAGCTGTACA ATAAATAGGA 82518 .......... .......... .......... .......... .......... .......... 260 TTCTTGTACT TATAAAGAGT CTAGTAACTT TGTACTTTGG ATAGTACTAT GAGTAGTACA 82578 .......... .......... .......... .......... .......... .......... 260 ACATTTGATG AAAGGAGGAG ATGTACACTT AAGAGTAGTA TTATATCAAT CTTTTTCGCC 82638 .......... .......... .......... .......... .......... .......... 260 TCTGCTTTAG GTAGATCAAC TAACATCTTC TGTTAGAAGA GAGGACAAGA GCCCTTATAT 82698 .......... .......... .......... .......... .......... .......... 260 AATGCTACTA CAAACAATAT TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT 82758 .......... .......... .......... .......... .......... .......... 260 ATATTGCCGA TAACACGTGA CGGTTTTTTC TCCTTGATCA ATTGCTGAGG TAAATTGATT 82818 .......... .......... .......... .......... .......... .......... 260 GTGCTGGTTG TAATGTGATT AGTGAGTGTA TCAGAGATGA TGACTTTTAA CGGGAGGGGG 82878 .......... .......... .......... .......... .......... .......... 260 GTATCTTTTA ATCTTGATGG CTTAATGTAG CCCATTTTGT TGGTTATTGA AGGTTTAGTT 82938 .......... .......... .......... .......... .......... .......... 260 TGGGGGGCTT ATGTTTGTTT CTATTGGTTT CTTTGTGAGT TGATATATTA TGTTGCACAT 82998 .......... .......... .......... .......... .......... .......... 260 TGTTGTTTTT TTCCACGTTA AACTGATCAT ATTGACAAAT TGGTGACAGA CAGAGTTTAT 83058 | |||||||||| .......... .......... .......... .......... .........A CAGAGTTTAT 271 GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 83118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 331 AGGTATATGC TAAGAAAAAA GAAGAAGAGA GAAACCATGC CCTGTAATGG GGCTTTATTT 83178 || AG........ .......... .......... .......... .......... .......... 333 TTAACTTCCT CATTTGTTTT GGTGTTGAAA GAGATCTTTT ATGTGGCTTT TAGGAGTCAA 83238 ||||||| .......... .......... .......... .......... .......... ...GAGTCAA 340 GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 83298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 400 GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG G 83349 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| | GACAATGACT GAAGCCTTGG AGCAAACAGG GCGAAAAGCC CGTCTGATTG G 451 hqPGS_C08HBa0165B06.1+_SGN-E259961+ (81859 82091,82381 82407,83048 83120,83232 83349) ******************************************************************************** EST sequence 89 +strand 560 n (File: SGN-E274956+) 1 CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT GTTTCTTCTA 61 TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC TCAATTTCTA 121 GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG AGTCCTCCTT 181 CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT AATGGAGTCG 241 TTTTGCCTGA GTTGCTGACA GAGTTTATGG TGGATATGTC GTGTCAAGGC TGTGTTAGTG 301 CTGTCAAGAG CAAATTGCAA ACCGTAGAAG GAGTCAAGAA TGTAGATGTG GATCTTGATA 361 ATCAAGTAGT GAGAATTCTT GGATCTTCAC CTGTGAAGAC AATGACTGAA GCCTTGGAGC 421 AAACAGGTCG AAAAGCCCGT CTGATTGGGC AAGGAGTACC GGATGATTTC CTTATATCTG 481 CTGCCGTTGC CGAATTCAAA GGACCAGATA TTTTTGGTGT TGTTCGCTTG GCTCAAGTCA 541 ATATGGAATT AACTAGGATT Predicted gene structure (within gDNA segment 81262 to 84365): Exon 1 81862 82091 ( 230 n); cDNA 1 230 ( 230 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 0) Exon 2 82381 82407 ( 27 n); cDNA 231 257 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 3 83048 83120 ( 73 n); cDNA 258 330 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 83232 83366 ( 135 n); cDNA 331 465 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 1.00) Exon 5 83661 83755 ( 95 n); cDNA 466 560 ( 95 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E274956+ 1.000 560 1.000 C PGS_C08HBa0165B06.1+_SGN-E274956+ (81862 82091,82381 82407,83048 83120,83232 83366,83661 83755) Alignment (genomic DNA sequence = upper lines): CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT GTTTCTTCTA 81921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAAAAAC TACCGCCATT GCTGCTGCTA TTCCAGCTGC TGCTTTTGCT GTTTCTTCTA 60 TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC TCAATTTCTA 81981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTCTTC TTCGCAGTTT GAACGTCCGT TGAAAAATCT AAAATTTGGC TCAATTTCTA 120 GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG AGTCCTCCTT 82041 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCGAATTC GATTCTCCAA TTAAGCTTCG CGAAGAATCT ACAAAAAAAG AGTCCTCCTT 180 CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT GTAATAATTT 82101 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCTCTTCA TATGGAAACG CATTCTTCAA ATCACCAAAC TTCCTCCGAT .......... 230 TATCCTTCAG CTCTTTTATC TTTTTGTTGA TTTTTTGAAT TATTTGGAGA ATCTTACAGG 82161 .......... .......... .......... .......... .......... .......... 230 GGTCAATTGG TTGGCTAATT GAATTTTCAC CTATTGGCGA GGATTTAGGG TTTAGGGAGG 82221 .......... .......... .......... .......... .......... .......... 230 TCTTACTTGT ATTGCAATTC TTCACTACTA AATTTTAGAT CCATCTCTTT TTTTTAATCC 82281 .......... .......... .......... .......... .......... .......... 230 AGAATGAAAA ACTAATATGT TTAATTTTTT TTTGTTTGTA AATTTGGCAA TAAATGGATG 82341 .......... .......... .......... .......... .......... .......... 230 CTATTGTTCT AATTGGGTTA TGTGATTTTT CGTTTGCAGA ATGGAGTCGT TTTGCCTGAG 82401 | |||||||||| |||||||||| .......... .......... .......... .........A ATGGAGTCGT TTTGCCTGAG 251 TTGCTGGTAA GTTTTTTCTC AGGAAAAAAA AAATCTCTGT TATTTTTGTT TGGAGGAGAA 82461 |||||| TTGCTG.... .......... .......... .......... .......... .......... 257 ATGAGGAAAT TTCTGGTGTT TTTTTATTGC ACATTGGAAG CTGTACAATA AATAGGATTC 82521 .......... .......... .......... .......... .......... .......... 257 TTGTACTTAT AAAGAGTCTA GTAACTTTGT ACTTTGGATA GTACTATGAG TAGTACAACA 82581 .......... .......... .......... .......... .......... .......... 257 TTTGATGAAA GGAGGAGATG TACACTTAAG AGTAGTATTA TATCAATCTT TTTCGCCTCT 82641 .......... .......... .......... .......... .......... .......... 257 GCTTTAGGTA GATCAACTAA CATCTTCTGT TAGAAGAGAG GACAAGAGCC CTTATATAAT 82701 .......... .......... .......... .......... .......... .......... 257 GCTACTACAA ACAATATTCA TTTGTCAATA AAAAATCTGT AGCTCTGCTT TTGAATTATA 82761 .......... .......... .......... .......... .......... .......... 257 TTGCCGATAA CACGTGACGG TTTTTTCTCC TTGATCAATT GCTGAGGTAA ATTGATTGTG 82821 .......... .......... .......... .......... .......... .......... 257 CTGGTTGTAA TGTGATTAGT GAGTGTATCA GAGATGATGA CTTTTAACGG GAGGGGGGTA 82881 .......... .......... .......... .......... .......... .......... 257 TCTTTTAATC TTGATGGCTT AATGTAGCCC ATTTTGTTGG TTATTGAAGG TTTAGTTTGG 82941 .......... .......... .......... .......... .......... .......... 257 GGGGCTTATG TTTGTTTCTA TTGGTTTCTT TGTGAGTTGA TATATTATGT TGCACATTGT 83001 .......... .......... .......... .......... .......... .......... 257 TGTTTTTTTC CACGTTAAAC TGATCATATT GACAAATTGG TGACAGACAG AGTTTATGGT 83061 |||| |||||||||| .......... .......... .......... .......... ......ACAG AGTTTATGGT 271 GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA CCGTAGAAGG 83121 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGATATGTCG TGTCAAGGCT GTGTTAGTGC TGTCAAGAGC AAATTGCAAA CCGTAGAAG. 330 TATATGCTAA GAAAAAAGAA GAAGAGAGAA ACCATGCCCT GTAATGGGGC TTTATTTTTA 83181 .......... .......... .......... .......... .......... .......... 330 ACTTCCTCAT TTGTTTTGGT GTTGAAAGAG ATCTTTTATG TGGCTTTTAG GAGTCAAGAA 83241 |||||||||| .......... .......... .......... .......... .......... GAGTCAAGAA 340 TGTAGATGTG GATCTTGATA ATCAAGTAGT GAGAATTCTT GGATCTTCAC CTGTGAAGAC 83301 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAGATGTG GATCTTGATA ATCAAGTAGT GAGAATTCTT GGATCTTCAC CTGTGAAGAC 400 AATGACTGAA GCCTTGGAGC AAACAGGTCG AAAAGCCCGT CTGATTGGGC AAGGAGTACC 83361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGACTGAA GCCTTGGAGC AAACAGGTCG AAAAGCCCGT CTGATTGGGC AAGGAGTACC 460 GGATGGTATG TTCCGATCTT ATCTAATTGC ATCTGTCATG TTTCCTAAGT TAGTATTATA 83421 ||||| GGATG..... .......... .......... .......... .......... .......... 465 GAAAATTTGT GAAGCATTAT GTCTTCACAT CTCTGGCTAT GTTAAAGAGG ATGAGCAGAA 83481 .......... .......... .......... .......... .......... .......... 465 GTAAAGCATA CTTATGATTA TAGTGTGTAA TGGCCTTCTT AAGTGCTGAA GGGAACGAAG 83541 .......... .......... .......... .......... .......... .......... 465 AGTGCAAAAA AAGAGATATT ATGCACTTCT CTCATGAGCT TCAGTCGTCT TAGCTTTATC 83601 .......... .......... .......... .......... .......... .......... 465 TGCTTTATAT TTTATGCGAT GCATCTTACT TTTATATTCA TTTGAACCAT GCCCTGTAGA 83661 | .......... .......... .......... .......... .......... .........A 466 TTTCCTTATA TCTGCTGCCG TTGCCGAATT CAAAGGACCA GATATTTTTG GTGTTGTTCG 83721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTTATA TCTGCTGCCG TTGCCGAATT CAAAGGACCA GATATTTTTG GTGTTGTTCG 526 CTTGGCTCAA GTCAATATGG AATTAACTAG GATT 83755 |||||||||| |||||||||| |||||||||| |||| CTTGGCTCAA GTCAATATGG AATTAACTAG GATT 560 hqPGS_C08HBa0165B06.1+_SGN-E274956+ (81862 82091,82381 82407,83048 83120,83232 83366,83661 83755) ******************************************************************************** EST sequence 51 +strand 544 n (File: SGN-E201842+) 1 TAACATCTTC TGTTACAAGA GAGGACAAGA GCCCTTATGT AATGCTACTA CAAACAATGT 61 TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT ATATTGCCGA TAACACGTGA 121 CGGTTTTTTC TCCTTGATCA ATCGCTGAGA GTTTATGGTG GATATGTCGT GTCAAGGCTG 181 TGTTAGTGCT GTCAAGAGCA AATTGCAAAC CGAAGAAGGA GTCAAGAATG TATATGTGGA 241 TCTTGATAAT CAAGTAGTGA GAATTCTTGG ATCTTCACCT GTGAAGACAA TGACTGAAGC 301 CTTGGAGCAA ACAGGTCGAA AAGCCCGTCT GATTGGGCAA GGAGTACCGG ATGATTTCCT 361 TATATCTGCT GCCGATGCCG AATTCAAAGG ACCAGATATT TTTGGTGTTG TTCGCTAGGC 421 TCAAGTCAAT ATGGAATTAA CTAGGATTGA AGCAAACTTC AGTGGCCTGT CACCTGGGAA 481 GCATGCTTGG TCTATTAATG AATTTGGTGA TTTGACGAGG GGGGCAGCTA GTACTGGAAA 541 ATTG Predicted gene structure (within gDNA segment 81915 to 84461): Exon 1 82659 82807 ( 149 n); cDNA 1 149 ( 149 n); score: 0.973 Intron 1 82808 83051 ( 244 n); Pd: 0.226 (s: 0.98), Pa: 0.000 (s: 1.00) Exon 2 83052 83120 ( 69 n); cDNA 150 218 ( 69 n); score: 0.986 Intron 2 83121 83231 ( 111 n); Pd: 0.000 (s: 0.98), Pa: 0.990 (s: 0.98) Exon 3 83232 83366 ( 135 n); cDNA 219 353 ( 135 n); score: 0.993 Intron 3 83367 83660 ( 294 n); Pd: 0.993 (s: 1.00), Pa: 0.807 (s: 0.98) Exon 4 83661 83851 ( 191 n); cDNA 354 544 ( 191 n); score: 0.990 MATCH C08HBa0165B06.1+ SGN-E201842+ 0.985 544 1.000 C PGS_C08HBa0165B06.1+_SGN-E201842+ (82659 82807,83052 83120,83232 83366,83661 83851) Alignment (genomic DNA sequence = upper lines): TAACATCTTC TGTTAGAAGA GAGGACAAGA GCCCTTATAT AATGCTACTA CAAACAATAT 82718 |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| |||||||| | TAACATCTTC TGTTACAAGA GAGGACAAGA GCCCTTATGT AATGCTACTA CAAACAATGT 60 TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT ATATTGCCGA TAACACGTGA 82778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT ATATTGCCGA TAACACGTGA 120 CGGTTTTTTC TCCTTGATCA ATTGCTGAGG TAAATTGATT GTGCTGGTTG TAATGTGATT 82838 |||||||||| |||||||||| || |||||| CGGTTTTTTC TCCTTGATCA ATCGCTGAG. .......... .......... .......... 149 AGTGAGTGTA TCAGAGATGA TGACTTTTAA CGGGAGGGGG GTATCTTTTA ATCTTGATGG 82898 .......... .......... .......... .......... .......... .......... 149 CTTAATGTAG CCCATTTTGT TGGTTATTGA AGGTTTAGTT TGGGGGGCTT ATGTTTGTTT 82958 .......... .......... .......... .......... .......... .......... 149 CTATTGGTTT CTTTGTGAGT TGATATATTA TGTTGCACAT TGTTGTTTTT TTCCACGTTA 83018 .......... .......... .......... .......... .......... .......... 149 AACTGATCAT ATTGACAAAT TGGTGACAGA CAGAGTTTAT GGTGGATATG TCGTGTCAAG 83078 ||||||| |||||||||| |||||||||| .......... .......... .......... ...AGTTTAT GGTGGATATG TCGTGTCAAG 176 GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA AGGTATATGC TAAGAAAAAA 83138 |||||||||| |||||||||| |||||||||| |||||| ||| || GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGAAGA AG........ .......... 218 GAAGAAGAGA GAAACCATGC CCTGTAATGG GGCTTTATTT TTAACTTCCT CATTTGTTTT 83198 .......... .......... .......... .......... .......... .......... 218 GGTGTTGAAA GAGATCTTTT ATGTGGCTTT TAGGAGTCAA GAATGTAGAT GTGGATCTTG 83258 ||||||| ||||||| || |||||||||| .......... .......... .......... ...GAGTCAA GAATGTATAT GTGGATCTTG 245 ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA GACAATGACT GAAGCCTTGG 83318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA GACAATGACT GAAGCCTTGG 305 AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT ACCGGATGGT ATGTTCCGAT 83378 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT ACCGGATG.. .......... 353 CTTATCTAAT TGCATCTGTC ATGTTTCCTA AGTTAGTATT ATAGAAAATT TGTGAAGCAT 83438 .......... .......... .......... .......... .......... .......... 353 TATGTCTTCA CATCTCTGGC TATGTTAAAG AGGATGAGCA GAAGTAAAGC ATACTTATGA 83498 .......... .......... .......... .......... .......... .......... 353 TTATAGTGTG TAATGGCCTT CTTAAGTGCT GAAGGGAACG AAGAGTGCAA AAAAAGAGAT 83558 .......... .......... .......... .......... .......... .......... 353 ATTATGCACT TCTCTCATGA GCTTCAGTCG TCTTAGCTTT ATCTGCTTTA TATTTTATGC 83618 .......... .......... .......... .......... .......... .......... 353 GATGCATCTT ACTTTTATAT TCATTTGAAC CATGCCCTGT AGATTTCCTT ATATCTGCTG 83678 |||||||| |||||||||| .......... .......... .......... .......... ..ATTTCCTT ATATCTGCTG 371 CCGTTGCCGA ATTCAAAGGA CCAGATATTT TTGGTGTTGT TCGCTTGGCT CAAGTCAATA 83738 ||| |||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CCGATGCCGA ATTCAAAGGA CCAGATATTT TTGGTGTTGT TCGCTAGGCT CAAGTCAATA 431 TGGAATTAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC ACCTGGGAAG CATGCTTGGT 83798 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATTAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC ACCTGGGAAG CATGCTTGGT 491 CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG TACTGGAAAA TTG 83851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG TACTGGAAAA TTG 544 hqPGS_C08HBa0165B06.1+_SGN-E201842+ (82659 82807,83052 83120,83232 83366,83661 83851) ******************************************************************************** EST sequence 355 -strand 740 n (File: SGN-E544746-) 1 GAGTTGCTGA CAGAGTTTAT GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG 61 AGCAAATTGC AAACCGTAGA AGGAGTCAAG AATGTAGATG TGGATCTTGA TAATCAAGTA 121 GTGAGAATTC TTGGATCTTC ACCTGTGAAG ACAATGACTG AAGCCTTGGA GCAAACAGGT 181 CGAAAAGCCC GTCTGATTGG GCAAGGAGTA CCGGAATTAA CTAGGATTGA AGCAAACTTC 241 AGTGGCCTGT CACCTGGGAA GCATGCTTGG TCTATTAATG AATTTGGTGA TTTGACGAGG 301 GGGGCAGCTA GTACTGGAAA ATTGTACAGC CTACCACTCG GTGACCTGGG AACACTGGAT 361 GTTGACGAGA AAGGAGAGGC ATTTTATTCC GGTCCTAAAG AGAAGCTGAG AGTTGCTGAC 421 CTGATTGGGA GAGCTATTGC TGTATATGCT ACTGAAGATA AATCAGACCC AGGACTTACA 481 GCAGCAGTGA TAGCTAGAAG TGCCGGGGTT GGTGAGAACT ACAAGAAGCT TTGCACTTGT 541 GATGGTACAA CTATCTGGGA AGCAACCAGC AAAATCTGAA CAGTTTATTA TCTTTAGAAT 601 CATTTGATCA TTGTATACTA CTACGTCTGT ATCATTCACA TTCATGATGC TTTTAAGTTG 661 GATGGACAAG CTAATGTATC AAAAATAAAT GTAATCATTT GTTGCTCTCA AAAAAAAAAA 721 AAAAAAAAAC TCGAGGGGGG Predicted gene structure (within gDNA segment 82357 to 85640): Exon 1 82399 82407 ( 9 n); cDNA 1 9 ( 9 n); score: 1.000 Intron 1 82408 83047 ( 640 n); Pd: 0.967 (s: 0), Pa: 0.956 (s: 1.00) Exon 2 83048 83120 ( 73 n); cDNA 10 82 ( 73 n); score: 1.000 Intron 2 83121 83231 ( 111 n); Pd: 0.000 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 3 83232 83366 ( 135 n); cDNA 83 217 ( 135 n); score: 0.985 Intron 3 83367 83744 ( 378 n); Pd: 0.993 (s: 0.96), Pa: 0.000 (s: 1.00) Exon 4 83745 83860 ( 116 n); cDNA 218 333 ( 116 n); score: 1.000 Intron 4 83861 84363 ( 503 n); Pd: 0.981 (s: 1.00), Pa: 0.994 (s: 1.00) Exon 5 84364 84740 ( 377 n); cDNA 334 710 ( 377 n); score: 1.000 PPA cDNA 711 730 MATCH C08HBa0165B06.1+ SGN-E544746- 0.997 710 0.959 C PGS_C08HBa0165B06.1+_SGN-E544746- (82399 82407,83048 83120,83232 83366,83745 83860,84364 84740) Alignment (genomic DNA sequence = upper lines): GAGTTGCTGG TAAGTTTTTT CTCAGGAAAA AAAAAATCTC TGTTATTTTT GTTTGGAGGA 82458 ||||||||| GAGTTGCTG. .......... .......... .......... .......... .......... 9 GAAATGAGGA AATTTCTGGT GTTTTTTTAT TGCACATTGG AAGCTGTACA ATAAATAGGA 82518 .......... .......... .......... .......... .......... .......... 9 TTCTTGTACT TATAAAGAGT CTAGTAACTT TGTACTTTGG ATAGTACTAT GAGTAGTACA 82578 .......... .......... .......... .......... .......... .......... 9 ACATTTGATG AAAGGAGGAG ATGTACACTT AAGAGTAGTA TTATATCAAT CTTTTTCGCC 82638 .......... .......... .......... .......... .......... .......... 9 TCTGCTTTAG GTAGATCAAC TAACATCTTC TGTTAGAAGA GAGGACAAGA GCCCTTATAT 82698 .......... .......... .......... .......... .......... .......... 9 AATGCTACTA CAAACAATAT TCATTTGTCA ATAAAAAATC TGTAGCTCTG CTTTTGAATT 82758 .......... .......... .......... .......... .......... .......... 9 ATATTGCCGA TAACACGTGA CGGTTTTTTC TCCTTGATCA ATTGCTGAGG TAAATTGATT 82818 .......... .......... .......... .......... .......... .......... 9 GTGCTGGTTG TAATGTGATT AGTGAGTGTA TCAGAGATGA TGACTTTTAA CGGGAGGGGG 82878 .......... .......... .......... .......... .......... .......... 9 GTATCTTTTA ATCTTGATGG CTTAATGTAG CCCATTTTGT TGGTTATTGA AGGTTTAGTT 82938 .......... .......... .......... .......... .......... .......... 9 TGGGGGGCTT ATGTTTGTTT CTATTGGTTT CTTTGTGAGT TGATATATTA TGTTGCACAT 82998 .......... .......... .......... .......... .......... .......... 9 TGTTGTTTTT TTCCACGTTA AACTGATCAT ATTGACAAAT TGGTGACAGA CAGAGTTTAT 83058 | |||||||||| .......... .......... .......... .......... .........A CAGAGTTTAT 20 GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 83118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGATATG TCGTGTCAAG GCTGTGTTAG TGCTGTCAAG AGCAAATTGC AAACCGTAGA 80 AGGTATATGC TAAGAAAAAA GAAGAAGAGA GAAACCATGC CCTGTAATGG GGCTTTATTT 83178 || AG........ .......... .......... .......... .......... .......... 82 TTAACTTCCT CATTTGTTTT GGTGTTGAAA GAGATCTTTT ATGTGGCTTT TAGGAGTCAA 83238 ||||||| .......... .......... .......... .......... .......... ...GAGTCAA 89 GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 83298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTAGAT GTGGATCTTG ATAATCAAGT AGTGAGAATT CTTGGATCTT CACCTGTGAA 149 GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 83358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAATGACT GAAGCCTTGG AGCAAACAGG TCGAAAAGCC CGTCTGATTG GGCAAGGAGT 209 ACCGGATGGT ATGTTCCGAT CTTATCTAAT TGCATCTGTC ATGTTTCCTA AGTTAGTATT 83418 |||||| ACCGGAAT.. .......... .......... .......... .......... .......... 217 ATAGAAAATT TGTGAAGCAT TATGTCTTCA CATCTCTGGC TATGTTAAAG AGGATGAGCA 83478 .......... .......... .......... .......... .......... .......... 217 GAAGTAAAGC ATACTTATGA TTATAGTGTG TAATGGCCTT CTTAAGTGCT GAAGGGAACG 83538 .......... .......... .......... .......... .......... .......... 217 AAGAGTGCAA AAAAAGAGAT ATTATGCACT TCTCTCATGA GCTTCAGTCG TCTTAGCTTT 83598 .......... .......... .......... .......... .......... .......... 217 ATCTGCTTTA TATTTTATGC GATGCATCTT ACTTTTATAT TCATTTGAAC CATGCCCTGT 83658 .......... .......... .......... .......... .......... .......... 217 AGATTTCCTT ATATCTGCTG CCGTTGCCGA ATTCAAAGGA CCAGATATTT TTGGTGTTGT 83718 .......... .......... .......... .......... .......... .......... 217 TCGCTTGGCT CAAGTCAATA TGGAATTAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC 83778 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......TAAC TAGGATTGAA GCAAACTTCA GTGGCCTGTC 251 ACCTGGGAAG CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG 83838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTGGGAAG CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG 311 TACTGGAAAA TTGTACAGCC TAGTAAGTAA CACGCAAAAG AACATTTTAT TTATGTTGAA 83898 |||||||||| |||||||||| || TACTGGAAAA TTGTACAGCC TA........ .......... .......... .......... 333 TATGTTGTAC TATCTTCTTT CTACGAACCT TTGTTTCTTG GGGGCATGGA TTCTGCAATA 83958 .......... .......... .......... .......... .......... .......... 333 TACTTGCATT GAGAAAGAGA GAATCAGGAT CCATAATATT AATTATGCAA TCATGTTTCA 84018 .......... .......... .......... .......... .......... .......... 333 TTTAATCTCA CTCAAGGATG CTTGAAGTGT TTGGAGTATG ATATAAATGC TTTTAAGTGG 84078 .......... .......... .......... .......... .......... .......... 333 TCCTTTGCCA TATGAAATGC ATCTAATACC ATGCTGTTAG TTATGGAATC GTAACTGTCT 84138 .......... .......... .......... .......... .......... .......... 333 GGATACTAGA TAACATTTGT CAAGGACTGT GAAACTTTTC CTCTCTCTTT GTCCTCTGAA 84198 .......... .......... .......... .......... .......... .......... 333 AGTGAAATAA GCATCTATCA ATTGTAATTT TCCTTTTGTT GGACAGTCAA AAGGAGACAA 84258 .......... .......... .......... .......... .......... .......... 333 ATATATGGAT AAAGTTCTAA TGAATGATTG GTTTACTTAT GTCTAATATA TGTTGCACCA 84318 .......... .......... .......... .......... .......... .......... 333 GACAGACTAT TAACTGCATT TCTGATGTGT TTTTCCATCT TTCAGCCACT CGGTGACCTG 84378 ||||| |||||||||| .......... .......... .......... .......... .....CCACT CGGTGACCTG 348 GGAACACTGG ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG 84438 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACACTGG ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG 408 AGAGTTGCTG ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC 84498 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGTTGCTG ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC 468 CCAGGACTTA CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACAAGAAG 84558 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGACTTA CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACAAGAAG 528 CTTTGCACTT GTGATGGTAC AACTATCTGG GAAGCAACCA GCAAAATCTG AACAGTTTAT 84618 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGCACTT GTGATGGTAC AACTATCTGG GAAGCAACCA GCAAAATCTG AACAGTTTAT 588 TATCTTTAGA ATCATTTGAT CATTGTATAC TACTACGTCT GTATCATTCA CATTCATGAT 84678 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCTTTAGA ATCATTTGAT CATTGTATAC TACTACGTCT GTATCATTCA CATTCATGAT 648 GCTTTTAAGT TGGATGGACA AGCTAATGTA TCAAAAATAA ATGTAATCAT TTGTTGCTCT 84738 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTAAGT TGGATGGACA AGCTAATGTA TCAAAAATAA ATGTAATCAT TTGTTGCTCT 708 CA 84740 || CA 710 hqPGS_C08HBa0165B06.1+_SGN-E544746- (83048 83120,83232 83366,83745 83860,84364 84740) ******************************************************************************** EST sequence 159 -strand 540 n (File: SGN-E242952-) 1 TCAAAGGACC AGATATTTTT GGTGTTGTTC GCTTGGCTCA AGTCAATATG GAATTAACTA 61 GGATTGAAGC AATCTTCAGT GGCCTGTCAC TTGGGAAGCA TGCTTGGTCT ATTAATGAAT 121 TTGGTGATTT GACGAGGGGG GCAGCTAGTA CTGGAAAATT GTACAGCCTA CCACTCGGTG 181 ACCTGGGAAC ACTGGATGTT GACGAGAAAG GAGAGGCATT TTATTCCGGT CCTAAAGAGA 241 AGCTGAGAGT TGCTGACCTG ATTGGGAGAG CTATTGCTGT ATATGCTACT GAAGATAAAT 301 CAGACCCAGG ACTTACAGCA GCAGTGATAG CTAGAAGTGC CGGGGTTGGT GAGAACTACA 361 AGAAGCTTTG CACTTGTGAT GGTACAACTA TCTGGGAAGC AACCAGCAAA ATCTGAACAG 421 TTTATTATCT TTAGAATCAT TTGATCATTG TATACTACTA CGTCTGTATC ATTCACATTC 481 ATGATGCTTT TAAGTTGGAT GGACAAGCTA ATGTATCAAA AATAAATGTA ATCATTTGTT Predicted gene structure (within gDNA segment 83081 to 85333): Exon 1 83691 83860 ( 170 n); cDNA 1 170 ( 170 n); score: 0.988 Intron 1 83861 84363 ( 503 n); Pd: 0.981 (s: 1.00), Pa: 0.994 (s: 1.00) Exon 2 84364 84733 ( 370 n); cDNA 171 540 ( 370 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E242952- 0.996 540 1.000 C PGS_C08HBa0165B06.1+_SGN-E242952- (83691 83860,84364 84733) Alignment (genomic DNA sequence = upper lines): TCAAAGGACC AGATATTTTT GGTGTTGTTC GCTTGGCTCA AGTCAATATG GAATTAACTA 83750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGGACC AGATATTTTT GGTGTTGTTC GCTTGGCTCA AGTCAATATG GAATTAACTA 60 GGATTGAAGC AAACTTCAGT GGCCTGTCAC CTGGGAAGCA TGCTTGGTCT ATTAATGAAT 83810 |||||||||| || ||||||| |||||||||| ||||||||| |||||||||| |||||||||| GGATTGAAGC AATCTTCAGT GGCCTGTCAC TTGGGAAGCA TGCTTGGTCT ATTAATGAAT 120 TTGGTGATTT GACGAGGGGG GCAGCTAGTA CTGGAAAATT GTACAGCCTA GTAAGTAACA 83870 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTGATTT GACGAGGGGG GCAGCTAGTA CTGGAAAATT GTACAGCCTA .......... 170 CGCAAAAGAA CATTTTATTT ATGTTGAATA TGTTGTACTA TCTTCTTTCT ACGAACCTTT 83930 .......... .......... .......... .......... .......... .......... 170 GTTTCTTGGG GGCATGGATT CTGCAATATA CTTGCATTGA GAAAGAGAGA ATCAGGATCC 83990 .......... .......... .......... .......... .......... .......... 170 ATAATATTAA TTATGCAATC ATGTTTCATT TAATCTCACT CAAGGATGCT TGAAGTGTTT 84050 .......... .......... .......... .......... .......... .......... 170 GGAGTATGAT ATAAATGCTT TTAAGTGGTC CTTTGCCATA TGAAATGCAT CTAATACCAT 84110 .......... .......... .......... .......... .......... .......... 170 GCTGTTAGTT ATGGAATCGT AACTGTCTGG ATACTAGATA ACATTTGTCA AGGACTGTGA 84170 .......... .......... .......... .......... .......... .......... 170 AACTTTTCCT CTCTCTTTGT CCTCTGAAAG TGAAATAAGC ATCTATCAAT TGTAATTTTC 84230 .......... .......... .......... .......... .......... .......... 170 CTTTTGTTGG ACAGTCAAAA GGAGACAAAT ATATGGATAA AGTTCTAATG AATGATTGGT 84290 .......... .......... .......... .......... .......... .......... 170 TTACTTATGT CTAATATATG TTGCACCAGA CAGACTATTA ACTGCATTTC TGATGTGTTT 84350 .......... .......... .......... .......... .......... .......... 170 TTCCATCTTT CAGCCACTCG GTGACCTGGG AACACTGGAT GTTGACGAGA AAGGAGAGGC 84410 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ...CCACTCG GTGACCTGGG AACACTGGAT GTTGACGAGA AAGGAGAGGC 217 ATTTTATTCC GGTCCTAAAG AGAAGCTGAG AGTTGCTGAC CTGATTGGGA GAGCTATTGC 84470 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTATTCC GGTCCTAAAG AGAAGCTGAG AGTTGCTGAC CTGATTGGGA GAGCTATTGC 277 TGTATATGCT ACTGAAGATA AATCAGACCC AGGACTTACA GCAGCAGTGA TAGCTAGAAG 84530 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTATATGCT ACTGAAGATA AATCAGACCC AGGACTTACA GCAGCAGTGA TAGCTAGAAG 337 TGCCGGGGTT GGTGAGAACT ACAAGAAGCT TTGCACTTGT GATGGTACAA CTATCTGGGA 84590 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGGGGTT GGTGAGAACT ACAAGAAGCT TTGCACTTGT GATGGTACAA CTATCTGGGA 397 AGCAACCAGC AAAATCTGAA CAGTTTATTA TCTTTAGAAT CATTTGATCA TTGTATACTA 84650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAACCAGC AAAATCTGAA CAGTTTATTA TCTTTAGAAT CATTTGATCA TTGTATACTA 457 CTACGTCTGT ATCATTCACA TTCATGATGC TTTTAAGTTG GATGGACAAG CTAATGTATC 84710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACGTCTGT ATCATTCACA TTCATGATGC TTTTAAGTTG GATGGACAAG CTAATGTATC 517 AAAAATAAAT GTAATCATTT GTT 84733 |||||||||| |||||||||| ||| AAAAATAAAT GTAATCATTT GTT 540 hqPGS_C08HBa0165B06.1+_SGN-E242952- (83691 83860,84364 84733) ******************************************************************************** EST sequence 384 -strand 469 n (File: SGN-E219098-) 1 CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGN GGGCAGCTAG TACTGGAAAA 61 TTGTACAGCC TACCACTCGG TGACCTGGGA ACACTGGATT TGACGAGAAA GGAGAGGCAT 121 TTTATTCCGG TCCTAAAGAG AAGCTGAGAG TTGCTGACCT GATTGGGAGA GCTATTGCTG 181 TATATGCTAC TGAAGATAAA TCAGACCCAG GACTTACAGC AGCAGTGATA GCTAGAAGTG 241 CCGGGGTTGG TGAGAACTAC AAGAAGCTTT GCACTTGTGA TGGTACAACT ATCTGGGAAG 301 CAACCAGCAA AATCTGAACA GTTTATTATC TTTAGAATCA TTTGATCATT GTATACTACT 361 ACGTCTGTAT CATTCACATT CATGATGCTT TTAAGTTGGA TGGACAAGCT AATGTATCAA 421 AAATCAATGT AATCATTTGT TGCTCTCAAA AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 83179 to 85550): Exon 1 83789 83860 ( 72 n); cDNA 1 72 ( 72 n); score: 0.986 Intron 1 83861 84363 ( 503 n); Pd: 0.981 (s: 0.98), Pa: 0.994 (s: 0.98) Exon 2 84364 84740 ( 377 n); cDNA 73 448 ( 376 n); score: 0.995 PPA cDNA 449 469 MATCH C08HBa0165B06.1+ SGN-E219098- 0.993 449 0.957 C PGS_C08HBa0165B06.1+_SGN-E219098- (83789 83860,84364 84740) Alignment (genomic DNA sequence = upper lines): CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGG GGGCAGCTAG TACTGGAAAA 83848 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CATGCTTGGT CTATTAATGA ATTTGGTGAT TTGACGAGGN GGGCAGCTAG TACTGGAAAA 60 TTGTACAGCC TAGTAAGTAA CACGCAAAAG AACATTTTAT TTATGTTGAA TATGTTGTAC 83908 |||||||||| || TTGTACAGCC TA........ .......... .......... .......... .......... 72 TATCTTCTTT CTACGAACCT TTGTTTCTTG GGGGCATGGA TTCTGCAATA TACTTGCATT 83968 .......... .......... .......... .......... .......... .......... 72 GAGAAAGAGA GAATCAGGAT CCATAATATT AATTATGCAA TCATGTTTCA TTTAATCTCA 84028 .......... .......... .......... .......... .......... .......... 72 CTCAAGGATG CTTGAAGTGT TTGGAGTATG ATATAAATGC TTTTAAGTGG TCCTTTGCCA 84088 .......... .......... .......... .......... .......... .......... 72 TATGAAATGC ATCTAATACC ATGCTGTTAG TTATGGAATC GTAACTGTCT GGATACTAGA 84148 .......... .......... .......... .......... .......... .......... 72 TAACATTTGT CAAGGACTGT GAAACTTTTC CTCTCTCTTT GTCCTCTGAA AGTGAAATAA 84208 .......... .......... .......... .......... .......... .......... 72 GCATCTATCA ATTGTAATTT TCCTTTTGTT GGACAGTCAA AAGGAGACAA ATATATGGAT 84268 .......... .......... .......... .......... .......... .......... 72 AAAGTTCTAA TGAATGATTG GTTTACTTAT GTCTAATATA TGTTGCACCA GACAGACTAT 84328 .......... .......... .......... .......... .......... .......... 72 TAACTGCATT TCTGATGTGT TTTTCCATCT TTCAGCCACT CGGTGACCTG GGAACACTGG 84388 ||||| |||||||||| |||||||||| .......... .......... .......... .....CCACT CGGTGACCTG GGAACACTGG 97 ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG AGAGTTGCTG 84448 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AT-TTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG AGAGTTGCTG 156 ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC CCAGGACTTA 84508 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC CCAGGACTTA 216 CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACAAGAAG CTTTGCACTT 84568 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACAAGAAG CTTTGCACTT 276 GTGATGGTAC AACTATCTGG GAAGCAACCA GCAAAATCTG AACAGTTTAT TATCTTTAGA 84628 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATGGTAC AACTATCTGG GAAGCAACCA GCAAAATCTG AACAGTTTAT TATCTTTAGA 336 ATCATTTGAT CATTGTATAC TACTACGTCT GTATCATTCA CATTCATGAT GCTTTTAAGT 84688 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATTTGAT CATTGTATAC TACTACGTCT GTATCATTCA CATTCATGAT GCTTTTAAGT 396 TGGATGGACA AGCTAATGTA TCAAAAATAA ATGTAATCAT TTGTTGCTCT CA 84740 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| || TGGATGGACA AGCTAATGTA TCAAAAATCA ATGTAATCAT TTGTTGCTCT CA 448 hqPGS_C08HBa0165B06.1+_SGN-E219098- (83789 83860,84364 84740) ******************************************************************************** EST sequence 366 -strand 405 n (File: SGN-E240522-) 1 GGGGGGCAGC TAGTACTGGA AAATTGTACA GCCTACCACT CGGTGACCTG GGAACACTGG 61 ATGTTGACGA GAAAGGAGAG GCATTTTATT CCGGTCCTAA AGAGAAGCTG AGAGTTGCTG 121 ACCTGATTGG GAGAGCTATT GCTGTATATG CTACTGAAGA TAAATCAGAC CCAGGACTTA 181 CAGCAGCAGT GATAGCTAGA AGTGCCGGGG TTGGTGAGAA CTACAAGAAG CTTTGCACTT 241 GTGATGGTAC AACTATCTGG GAAGCAACCA GCAAAATCTG AACAGTTTAT TATCTTTAGA 301 ATCATTTGAT CATTGTATAC TACTACGTCT GTATCATTCA CATTCATGAT GCTTTTAAGT 361 TGGATGGACA AGCTAATGTA TCAAAAATAA ATGTAATCAT TTGTT Predicted gene structure (within gDNA segment 83216 to 85333): Exon 1 83826 83860 ( 35 n); cDNA 1 35 ( 35 n); score: 1.000 Intron 1 83861 84363 ( 503 n); Pd: 0.981 (s: 0), Pa: 0.994 (s: 1.00) Exon 2 84364 84733 ( 370 n); cDNA 36 405 ( 370 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E240522- 1.000 405 1.000 C PGS_C08HBa0165B06.1+_SGN-E240522- (83826 83860,84364 84733) Alignment (genomic DNA sequence = upper lines): GGGGGGCAGC TAGTACTGGA AAATTGTACA GCCTAGTAAG TAACACGCAA AAGAACATTT 83885 |||||||||| |||||||||| |||||||||| ||||| GGGGGGCAGC TAGTACTGGA AAATTGTACA GCCTA..... .......... .......... 35 TATTTATGTT GAATATGTTG TACTATCTTC TTTCTACGAA CCTTTGTTTC TTGGGGGCAT 83945 .......... .......... .......... .......... .......... .......... 35 GGATTCTGCA ATATACTTGC ATTGAGAAAG AGAGAATCAG GATCCATAAT ATTAATTATG 84005 .......... .......... .......... .......... .......... .......... 35 CAATCATGTT TCATTTAATC TCACTCAAGG ATGCTTGAAG TGTTTGGAGT ATGATATAAA 84065 .......... .......... .......... .......... .......... .......... 35 TGCTTTTAAG TGGTCCTTTG CCATATGAAA TGCATCTAAT ACCATGCTGT TAGTTATGGA 84125 .......... .......... .......... .......... .......... .......... 35 ATCGTAACTG TCTGGATACT AGATAACATT TGTCAAGGAC TGTGAAACTT TTCCTCTCTC 84185 .......... .......... .......... .......... .......... .......... 35 TTTGTCCTCT GAAAGTGAAA TAAGCATCTA TCAATTGTAA TTTTCCTTTT GTTGGACAGT 84245 .......... .......... .......... .......... .......... .......... 35 CAAAAGGAGA CAAATATATG GATAAAGTTC TAATGAATGA TTGGTTTACT TATGTCTAAT 84305 .......... .......... .......... .......... .......... .......... 35 ATATGTTGCA CCAGACAGAC TATTAACTGC ATTTCTGATG TGTTTTTCCA TCTTTCAGCC 84365 || .......... .......... .......... .......... .......... ........CC 37 ACTCGGTGAC CTGGGAACAC TGGATGTTGA CGAGAAAGGA GAGGCATTTT ATTCCGGTCC 84425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCGGTGAC CTGGGAACAC TGGATGTTGA CGAGAAAGGA GAGGCATTTT ATTCCGGTCC 97 TAAAGAGAAG CTGAGAGTTG CTGACCTGAT TGGGAGAGCT ATTGCTGTAT ATGCTACTGA 84485 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGAGAAG CTGAGAGTTG CTGACCTGAT TGGGAGAGCT ATTGCTGTAT ATGCTACTGA 157 AGATAAATCA GACCCAGGAC TTACAGCAGC AGTGATAGCT AGAAGTGCCG GGGTTGGTGA 84545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATAAATCA GACCCAGGAC TTACAGCAGC AGTGATAGCT AGAAGTGCCG GGGTTGGTGA 217 GAACTACAAG AAGCTTTGCA CTTGTGATGG TACAACTATC TGGGAAGCAA CCAGCAAAAT 84605 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACTACAAG AAGCTTTGCA CTTGTGATGG TACAACTATC TGGGAAGCAA CCAGCAAAAT 277 CTGAACAGTT TATTATCTTT AGAATCATTT GATCATTGTA TACTACTACG TCTGTATCAT 84665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAACAGTT TATTATCTTT AGAATCATTT GATCATTGTA TACTACTACG TCTGTATCAT 337 TCACATTCAT GATGCTTTTA AGTTGGATGG ACAAGCTAAT GTATCAAAAA TAAATGTAAT 84725 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACATTCAT GATGCTTTTA AGTTGGATGG ACAAGCTAAT GTATCAAAAA TAAATGTAAT 397 CATTTGTT 84733 |||||||| CATTTGTT 405 hqPGS_C08HBa0165B06.1+_SGN-E240522- (83826 83860,84364 84733) ******************************************************************************** EST sequence 207 +strand 817 n (File: SGN-E552703+) 1 GAACAGGTTA GGGTCCCAGT TGGGAGGCTA ATTTTGGAAT TGCCAGCAGG AATGTTGGAT 61 GATGACCAAG GCGACTTTGC TGGAACAGCA GTTCGAGAAG TTGAGGAAGA AACTGGAATA 121 CACCTGAATG TCCATGATAT GGTCGATCTC ACGGCTTTTC TTGACGCGTC AACTGGGGGC 181 AGAGTTTTTC CTTCTCCTGG TGGATGTGAT GAGGAGATGA GTTTGTTTCT CTACAGAGGA 241 AATGTCAGCA AAGAGAAAAT CCAACAACTG CAAGGGAAAG AAACCGGACT ACGAGACCAT 301 GGTGAGCTGA TCAAAGTGCA TGTGGTTCCA TATGATAAAC TATGGCGTGC CACAGCTGAT 361 GCAAAGGCTC TGACCGCCAT TGCTCTCTAT GAGATGGCTA AAAGAGATGG ACTGTTGTCT 421 TGATCGACGA GTTAATAATT TCTCCTCCAT TATATAACAA CTTACGATTG TATGCTTTGC 481 TGAAAAGATG ACGACTCTCT ATTTTAGGCA AGTCTGCTTC TACAGTATGA GCATTCCTAG 541 GTGAACGCTC CGGGTAATTG CATCTACTGT TGCTTGGTAT TGAATTTTTG TATATTAGAC 601 GCAACTGTTC TGCATAGAAC AGAATTTTAC TGTTTCGAAA AAGAAATTTA AAAGGGGAAA 661 GAGAAGATTC TTCCTTGTTA TCTATCAGTA TTCAACACGA CTACCACCAA CTGGAATTTG 721 AGCTTTGTTT GAAGTTGAAT TCCCTATCTT TTCTCATTCA AATGAAGAGG AGCAGTTCGT 781 CACACAGGAA CCAAAGAAAG TGAGAGCAAC AAATGAT Predicted gene structure (within gDNA segment 87125 to 84114): Exon 1 86629 86624 ( 6 n); cDNA 1 6 ( 6 n); score: 1.000 Intron 1 86623 86484 ( 140 n); Pd: 0.993 (s: 0), Pa: 0.990 (s: 1.00) Exon 2 86483 86391 ( 93 n); cDNA 7 99 ( 93 n); score: 1.000 Intron 2 86390 85940 ( 451 n); Pd: 0.000 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 85939 85841 ( 99 n); cDNA 100 198 ( 99 n); score: 1.000 Intron 3 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 4 85342 84724 ( 619 n); cDNA 199 817 ( 619 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E552703+ 1.000 817 1.000 C PGS_C08HBa0165B06.1-_SGN-E552703+ (86629 86624,86483 86391,85939 85841,85342 84724) Alignment (genomic DNA sequence = upper lines): GAACAGGTAG GTCTTCCAAC TGTCAACTCC TCCATTTTTA TAACGTCGAA AAATATCTCA 86570 |||||| GAACAG.... .......... .......... .......... .......... .......... 6 CAGTACAGAT AATATGAGGA AATTTATGAA AGTTTTCTGT CCCTTTTACT GTTTAAACTC 86510 .......... .......... .......... .......... .......... .......... 6 TAAAATACAT TCAACCTGTT TGGAAGGTTA GGGTCCCAGT TGGGAGGCTA ATTTTGGAAT 86450 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GTTA GGGTCCCAGT TGGGAGGCTA ATTTTGGAAT 40 TGCCAGCAGG AATGTTGGAT GATGACCAAG GCGACTTTGC TGGAACAGCA GTTCGAGAAG 86390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TGCCAGCAGG AATGTTGGAT GATGACCAAG GCGACTTTGC TGGAACAGCA GTTCGAGAA. 99 TCTCTCTCTC CCTTTCTATC AAAGCACTAT CCCCTTCTCA AAATTTTCTC AAGTGAGACA 86330 .......... .......... .......... .......... .......... .......... 99 AGCTGTCCCC TTGTTTTTTT GGTGTTCAGT TCCCTAGTAT ATTAGTTTAT TATGGCATAA 86270 .......... .......... .......... .......... .......... .......... 99 TGAACTGTAT TCCTCTTATC GTGTCATTTT TCAACAAATC ACTGGAAGTT CCTTCGTTTC 86210 .......... .......... .......... .......... .......... .......... 99 TGAGCAAGTT CAATTGAATC CAGAAATCTG CTAATGAAAC TATATGCGTG ACTAAACTGA 86150 .......... .......... .......... .......... .......... .......... 99 AATCCTTATA AGAACATCAC AACTTCCTTA TCAAAAGCAA CTATTTGTTT TACATATTTG 86090 .......... .......... .......... .......... .......... .......... 99 ACAACTTAGT TGCACTCCAC TGTATAATTA AATATTGAAT ACTTTTGCAT TTGAATATAT 86030 .......... .......... .......... .......... .......... .......... 99 ATCGGTTTTA GCGCGTGGAT GGAAAAATCA GAGAGTTTGA CATTGCTTGG CTTAACTTAT 85970 .......... .......... .......... .......... .......... .......... 99 AATTGAAGTA TTTGATCTAA TATGATTCAG GTTGAGGAAG AAACTGGAAT ACACCTGAAT 85910 |||||||||| |||||||||| |||||||||| .......... .......... .......... GTTGAGGAAG AAACTGGAAT ACACCTGAAT 129 GTCCATGATA TGGTCGATCT CACGGCTTTT CTTGACGCGT CAACTGGGGG CAGAGTTTTT 85850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCATGATA TGGTCGATCT CACGGCTTTT CTTGACGCGT CAACTGGGGG CAGAGTTTTT 189 CCTTCTCCTG TAAGCATTCC ACCATCTTCT ATAAGACTCA GATAACTCTC AGCGCATGCT 85790 ||||||||| CCTTCTCCT. .......... .......... .......... .......... .......... 198 TTCTTGGATT TTGTATTATA GGAACAGAAA AAAGTAGAAA TATTTGCATT AACAACTAGT 85730 .......... .......... .......... .......... .......... .......... 198 TTCTGCTAAA ACTCTTATGG AAATGTATGT GTTGTAATAT ATATTTTTTT TATTTCTGTT 85670 .......... .......... .......... .......... .......... .......... 198 AGTCAATAAT TTTGATTCAT TGCACTGCTT GCTTTACTGT TTGGAACCTG TAAATTGTAA 85610 .......... .......... .......... .......... .......... .......... 198 TGACATTGGA TATTGCTCCA TGTGCACTTG CAATTAGTGG TATATTTGTG AACCTTGCCC 85550 .......... .......... .......... .......... .......... .......... 198 ATTGCACGGG GTAGGACTAG ACCTGACTTT TTTTGTTAGA GAGGGAAAGG TTCGGAGTAG 85490 .......... .......... .......... .......... .......... .......... 198 GCGCAACTAC ATTGGATCTT TTGTATGCAG CCAGCCTTAT ATTGGGTGTA TTTTTCAATT 85430 .......... .......... .......... .......... .......... .......... 198 CAAAGATGAG GCCTTCTGTG ATTGTTTCTG CCTTTATATA TCTCTTAACA CTATATTTAT 85370 .......... .......... .......... .......... .......... .......... 198 GTGGTTTTGG TGTTCTTTCA ATGTTAGGGT GGATGTGATG AGGAGATGAG TTTGTTTCTC 85310 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......GGT GGATGTGATG AGGAGATGAG TTTGTTTCTC 231 TACAGAGGAA ATGTCAGCAA AGAGAAAATC CAACAACTGC AAGGGAAAGA AACCGGACTA 85250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAGAGGAA ATGTCAGCAA AGAGAAAATC CAACAACTGC AAGGGAAAGA AACCGGACTA 291 CGAGACCATG GTGAGCTGAT CAAAGTGCAT GTGGTTCCAT ATGATAAACT ATGGCGTGCC 85190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGACCATG GTGAGCTGAT CAAAGTGCAT GTGGTTCCAT ATGATAAACT ATGGCGTGCC 351 ACAGCTGATG CAAAGGCTCT GACCGCCATT GCTCTCTATG AGATGGCTAA AAGAGATGGA 85130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCTGATG CAAAGGCTCT GACCGCCATT GCTCTCTATG AGATGGCTAA AAGAGATGGA 411 CTGTTGTCTT GATCGACGAG TTAATAATTT CTCCTCCATT ATATAACAAC TTACGATTGT 85070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGTCTT GATCGACGAG TTAATAATTT CTCCTCCATT ATATAACAAC TTACGATTGT 471 ATGCTTTGCT GAAAAGATGA CGACTCTCTA TTTTAGGCAA GTCTGCTTCT ACAGTATGAG 85010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCTTTGCT GAAAAGATGA CGACTCTCTA TTTTAGGCAA GTCTGCTTCT ACAGTATGAG 531 CATTCCTAGG TGAACGCTCC GGGTAATTGC ATCTACTGTT GCTTGGTATT GAATTTTTGT 84950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCCTAGG TGAACGCTCC GGGTAATTGC ATCTACTGTT GCTTGGTATT GAATTTTTGT 591 ATATTAGACG CAACTGTTCT GCATAGAACA GAATTTTACT GTTTCGAAAA AGAAATTTAA 84890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAGACG CAACTGTTCT GCATAGAACA GAATTTTACT GTTTCGAAAA AGAAATTTAA 651 AAGGGGAAAG AGAAGATTCT TCCTTGTTAT CTATCAGTAT TCAACACGAC TACCACCAAC 84830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGGAAAG AGAAGATTCT TCCTTGTTAT CTATCAGTAT TCAACACGAC TACCACCAAC 711 TGGAATTTGA GCTTTGTTTG AAGTTGAATT CCCTATCTTT TCTCATTCAA ATGAAGAGGA 84770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATTTGA GCTTTGTTTG AAGTTGAATT CCCTATCTTT TCTCATTCAA ATGAAGAGGA 771 GCAGTTCGTC ACACAGGAAC CAAAGAAAGT GAGAGCAACA AATGAT 84724 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GCAGTTCGTC ACACAGGAAC CAAAGAAAGT GAGAGCAACA AATGAT 817 hqPGS_C08HBa0165B06.1-_SGN-E552703+ (86629 86624,86483 86391,85939 85841,85342 84724) ******************************************************************************** EST sequence 262 +strand 728 n (File: SGN-E556212+) 1 GTACAGGTTA CGGTCCCAGT TGGGAGGCTA ATTTTGGAAT TGCCAGCAGG GATGTTGGAT 61 GATGACCAAG GCGACTTTGC TGGAACAGCA GTTCTAGAAG TTGAGGAAGA AACTGGAATA 121 CACCTGAATG TCCATGATAT GGTGCGATCT CACGGTCTTT TCTTGACGCG TCAACTGGGG 181 GCAGAGTTTT TCCTTCTCCT GGTGGATGTG ATGAGGAGAT GAGTTTGTTT CTCTACAGAA 241 GAAATGTCAG AAAAGAGAAA ATCCAGCAAC TGCAAGGGAA AGAAACCGGA CTACGAGACC 301 ATGATGAGCT GATCAAAGTG CATGTGGTTC CATATGATAA ACTATGGCGT GCCTCACCTG 361 ATGCAAAGGC TCTGACCGCC ATTGCTCTCT ATGAGATGGC TAAAAGAGAT GGACTGTTGT 421 CTTGATCGAC AAGTTAATGA TTTCTCCTCC ATTATATCAC AACTTACGAT TGTATGCTTT 481 GCTGAACAGA TGACGACTCT CTATTTTAGG CAAGTCTGCT TCTACAGTAT GAGCATTCCT 541 AGGTGAACGC TCCGGGTAAT TGCATCTACT GTTGCTTGGT ATTGAATTTT GGTATATTAG 601 ACGCACCTGT TCTGCATAGA ACATAATTTT ACTGTTTCGA ACAAGACATT TAAGAGGGGA 661 AAGAGAAGAT TCTTCCTTGT TATCTATCAG TATTCAACGC CACTACCACC AACTGGAATT 721 TGAGCTTT Predicted gene structure (within gDNA segment 87188 to 84205): Exon 1 86483 86391 ( 93 n); cDNA 7 99 ( 93 n); score: 0.968 Intron 1 86390 85940 ( 451 n); Pd: 0.000 (s: 0.96), Pa: 0.999 (s: 0.95) Exon 2 85939 85841 ( 99 n); cDNA 100 200 ( 101 n); score: 0.949 Intron 2 85840 85343 ( 498 n); Pd: 0.825 (s: 0.95), Pa: 0.993 (s: 0.98) Exon 3 85342 84815 ( 528 n); cDNA 201 728 ( 528 n); score: 0.966 MATCH C08HBa0165B06.1- SGN-E556212+ 0.964 720 0.989 C PGS_C08HBa0165B06.1-_SGN-E556212+ (86483 86391,85939 85841,85342 84815) Alignment (genomic DNA sequence = upper lines): GTTAGGGTCC CAGTTGGGAG GCTAATTTTG GAATTGCCAG CAGGAATGTT GGATGATGAC 86424 |||| ||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| GTTACGGTCC CAGTTGGGAG GCTAATTTTG GAATTGCCAG CAGGGATGTT GGATGATGAC 66 CAAGGCGACT TTGCTGGAAC AGCAGTTCGA GAAGTCTCTC TCTCCCTTTC TATCAAAGCA 86364 |||||||||| |||||||||| |||||||| | ||| CAAGGCGACT TTGCTGGAAC AGCAGTTCTA GAA....... .......... .......... 99 CTATCCCCTT CTCAAAATTT TCTCAAGTGA GACAAGCTGT CCCCTTGTTT TTTTGGTGTT 86304 .......... .......... .......... .......... .......... .......... 99 CAGTTCCCTA GTATATTAGT TTATTATGGC ATAATGAACT GTATTCCTCT TATCGTGTCA 86244 .......... .......... .......... .......... .......... .......... 99 TTTTTCAACA AATCACTGGA AGTTCCTTCG TTTCTGAGCA AGTTCAATTG AATCCAGAAA 86184 .......... .......... .......... .......... .......... .......... 99 TCTGCTAATG AAACTATATG CGTGACTAAA CTGAAATCCT TATAAGAACA TCACAACTTC 86124 .......... .......... .......... .......... .......... .......... 99 CTTATCAAAA GCAACTATTT GTTTTACATA TTTGACAACT TAGTTGCACT CCACTGTATA 86064 .......... .......... .......... .......... .......... .......... 99 ATTAAATATT GAATACTTTT GCATTTGAAT ATATATCGGT TTTAGCGCGT GGATGGAAAA 86004 .......... .......... .......... .......... .......... .......... 99 ATCAGAGAGT TTGACATTGC TTGGCTTAAC TTATAATTGA AGTATTTGAT CTAATATGAT 85944 .......... .......... .......... .......... .......... .......... 99 TCAGGTTGAG GAAGAAACTG GAATACACCT GAATGTCCAT GATATGGT-C GATCTCACGG 85885 |||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ....GTTGAG GAAGAAACTG GAATACACCT GAATGTCCAT GATATGGTGC GATCTCACGG 155 -CTTTTCTTG ACGCGTCAAC TGGGGGCAGA GTTTTTCCTT CTCCTGTAAG CATTCCACCA 85826 ||||||||| |||||||||| |||||||||| |||||||||| ||||| TCTTTTCTTG ACGCGTCAAC TGGGGGCAGA GTTTTTCCTT CTCCT..... .......... 200 TCTTCTATAA GACTCAGATA ACTCTCAGCG CATGCTTTCT TGGATTTTGT ATTATAGGAA 85766 .......... .......... .......... .......... .......... .......... 200 CAGAAAAAAG TAGAAATATT TGCATTAACA ACTAGTTTCT GCTAAAACTC TTATGGAAAT 85706 .......... .......... .......... .......... .......... .......... 200 GTATGTGTTG TAATATATAT TTTTTTTATT TCTGTTAGTC AATAATTTTG ATTCATTGCA 85646 .......... .......... .......... .......... .......... .......... 200 CTGCTTGCTT TACTGTTTGG AACCTGTAAA TTGTAATGAC ATTGGATATT GCTCCATGTG 85586 .......... .......... .......... .......... .......... .......... 200 CACTTGCAAT TAGTGGTATA TTTGTGAACC TTGCCCATTG CACGGGGTAG GACTAGACCT 85526 .......... .......... .......... .......... .......... .......... 200 GACTTTTTTT GTTAGAGAGG GAAAGGTTCG GAGTAGGCGC AACTACATTG GATCTTTTGT 85466 .......... .......... .......... .......... .......... .......... 200 ATGCAGCCAG CCTTATATTG GGTGTATTTT TCAATTCAAA GATGAGGCCT TCTGTGATTG 85406 .......... .......... .......... .......... .......... .......... 200 TTTCTGCCTT TATATATCTC TTAACACTAT ATTTATGTGG TTTTGGTGTT CTTTCAATGT 85346 .......... .......... .......... .......... .......... .......... 200 TAGGGTGGAT GTGATGAGGA GATGAGTTTG TTTCTCTACA GAGGAAATGT CAGCAAAGAG 85286 ||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||| |||||| ...GGTGGAT GTGATGAGGA GATGAGTTTG TTTCTCTACA GAAGAAATGT CAGAAAAGAG 257 AAAATCCAAC AACTGCAAGG GAAAGAAACC GGACTACGAG ACCATGGTGA GCTGATCAAA 85226 |||||||| | |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| AAAATCCAGC AACTGCAAGG GAAAGAAACC GGACTACGAG ACCATGATGA GCTGATCAAA 317 GTGCATGTGG TTCCATATGA TAAACTATGG CGTGCCACAG CTGATGCAAA GGCTCTGACC 85166 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| GTGCATGTGG TTCCATATGA TAAACTATGG CGTGCCTCAC CTGATGCAAA GGCTCTGACC 377 GCCATTGCTC TCTATGAGAT GGCTAAAAGA GATGGACTGT TGTCTTGATC GACGAGTTAA 85106 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GCCATTGCTC TCTATGAGAT GGCTAAAAGA GATGGACTGT TGTCTTGATC GACAAGTTAA 437 TAATTTCTCC TCCATTATAT AACAACTTAC GATTGTATGC TTTGCTGAAA AGATGACGAC 85046 | |||||||| |||||||||| ||||||||| |||||||||| ||||||||| |||||||||| TGATTTCTCC TCCATTATAT CACAACTTAC GATTGTATGC TTTGCTGAAC AGATGACGAC 497 TCTCTATTTT AGGCAAGTCT GCTTCTACAG TATGAGCATT CCTAGGTGAA CGCTCCGGGT 84986 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCTATTTT AGGCAAGTCT GCTTCTACAG TATGAGCATT CCTAGGTGAA CGCTCCGGGT 557 AATTGCATCT ACTGTTGCTT GGTATTGAAT TTTTGTATAT TAGACGCAAC TGTTCTGCAT 84926 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| AATTGCATCT ACTGTTGCTT GGTATTGAAT TTTGGTATAT TAGACGCACC TGTTCTGCAT 617 AGAACAGAAT TTTACTGTTT CGAAAAAGAA ATTTAAAAGG GGAAAGAGAA GATTCTTCCT 84866 |||||| ||| |||||||||| |||| |||| |||||| ||| |||||||||| |||||||||| AGAACATAAT TTTACTGTTT CGAACAAGAC ATTTAAGAGG GGAAAGAGAA GATTCTTCCT 677 TGTTATCTAT CAGTATTCAA CACGACTACC ACCAACTGGA ATTTGAGCTT T 84815 |||||||||| |||||||||| | | |||||| |||||||||| |||||||||| | TGTTATCTAT CAGTATTCAA CGCCACTACC ACCAACTGGA ATTTGAGCTT T 728 hqPGS_C08HBa0165B06.1-_SGN-E556212+ (86483 86391,85939 85841,85342 84815) ******************************************************************************** EST sequence 354 +strand 621 n (File: SGN-E368683+) 1 TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 61 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 121 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 181 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGGT GGATGTGATG 241 AGGAGATGAG TTTGTTTCTC TACAGAGGAA ATGTCAGCAA AGAGAAAATC CAACAACTGC 301 AAGGGAAAGA AACCGGACTA CGAGACCATG GTGAGCTGAT CAAAGTGCAT GTGGTTCCAT 361 ATGATAAACT ATGGCGTGCC ACAGCTGATG CAAAGGCTCT GACCGCCATT GCTCTCTATG 421 AGATGGCTAA AAGAGATGGA CTGTTGTCTT GATCGACGAG TTAATAATTT CTCCTCCATT 481 ATATAACAAC TTACGATTGT ATGCTTTGCT GAAAAGATGA CGACTCTCTA TTTTAGGCAA 541 GTCTGCTTCT ACAGTATGAG CATTCCTAGG TGAACGCTCC GGGTAAATTG CATCTACTTG 601 TTGCTGGTAT TTGAATTTTT G Predicted gene structure (within gDNA segment 86667 to 84024): Exon 1 86067 85841 ( 227 n); cDNA 1 227 ( 227 n); score: 1.000 Intron 1 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 85342 84951 ( 392 n); cDNA 228 621 ( 394 n); score: 0.977 MATCH C08HBa0165B06.1- SGN-E368683+ 0.985 619 0.997 C PGS_C08HBa0165B06.1-_SGN-E368683+ (86067 85841,85342 84951) Alignment (genomic DNA sequence = upper lines): TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 86008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 60 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 85948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 120 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 85888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 180 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGTA AGCATTCCAC 85828 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCT... .......... 227 CATCTTCTAT AAGACTCAGA TAACTCTCAG CGCATGCTTT CTTGGATTTT GTATTATAGG 85768 .......... .......... .......... .......... .......... .......... 227 AACAGAAAAA AGTAGAAATA TTTGCATTAA CAACTAGTTT CTGCTAAAAC TCTTATGGAA 85708 .......... .......... .......... .......... .......... .......... 227 ATGTATGTGT TGTAATATAT ATTTTTTTTA TTTCTGTTAG TCAATAATTT TGATTCATTG 85648 .......... .......... .......... .......... .......... .......... 227 CACTGCTTGC TTTACTGTTT GGAACCTGTA AATTGTAATG ACATTGGATA TTGCTCCATG 85588 .......... .......... .......... .......... .......... .......... 227 TGCACTTGCA ATTAGTGGTA TATTTGTGAA CCTTGCCCAT TGCACGGGGT AGGACTAGAC 85528 .......... .......... .......... .......... .......... .......... 227 CTGACTTTTT TTGTTAGAGA GGGAAAGGTT CGGAGTAGGC GCAACTACAT TGGATCTTTT 85468 .......... .......... .......... .......... .......... .......... 227 GTATGCAGCC AGCCTTATAT TGGGTGTATT TTTCAATTCA AAGATGAGGC CTTCTGTGAT 85408 .......... .......... .......... .......... .......... .......... 227 TGTTTCTGCC TTTATATATC TCTTAACACT ATATTTATGT GGTTTTGGTG TTCTTTCAAT 85348 .......... .......... .......... .......... .......... .......... 227 GTTAGGGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 85288 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....GGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 282 AGAAAATCCA ACAACTGCAA GGGAAAGAAA CCGGACTACG AGACCATGGT GAGCTGATCA 85228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAAATCCA ACAACTGCAA GGGAAAGAAA CCGGACTACG AGACCATGGT GAGCTGATCA 342 AAGTGCATGT GGTTCCATAT GATAAACTAT GGCGTGCCAC AGCTGATGCA AAGGCTCTGA 85168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGCATGT GGTTCCATAT GATAAACTAT GGCGTGCCAC AGCTGATGCA AAGGCTCTGA 402 CCGCCATTGC TCTCTATGAG ATGGCTAAAA GAGATGGACT GTTGTCTTGA TCGACGAGTT 85108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCATTGC TCTCTATGAG ATGGCTAAAA GAGATGGACT GTTGTCTTGA TCGACGAGTT 462 AATAATTTCT CCTCCATTAT ATAACAACTT ACGATTGTAT GCTTTGCTGA AAAGATGACG 85048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATTTCT CCTCCATTAT ATAACAACTT ACGATTGTAT GCTTTGCTGA AAAGATGACG 522 ACTCTCTATT TTAGGCAAGT CTGCTTCTAC AGTATGAGCA TTCCTAGGTG AACGCTCCGG 84988 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCTCTATT TTAGGCAAGT CTGCTTCTAC AGTATGAGCA TTCCTAGGTG AACGCTCCGG 582 GT-AATTGCA TCTAC-TGTT GCTTGGTATT GAATTTTTG 84951 || ||||||| ||||| |||| ||| | || ||||||||| GTAAATTGCA TCTACTTGTT GCTGGTATTT GAATTTTTG 621 hqPGS_C08HBa0165B06.1-_SGN-E368683+ (86067 85841,85342 84951) ******************************************************************************** EST sequence 353 +strand 613 n (File: SGN-E368105+) 1 TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 61 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 121 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 181 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGGT GGATGTGATG 241 AGGAGATGAG TTTGTTTCTC TACAGAGGAA ATGTCAGCAA AGAGAAAATC CAACAACTGC 301 AAGGGAAAGA AACCGGACTA CGAGACCATG GTGAGCTGAT CAAAGTGCAT GTGGTTCCAT 361 ATGATAAACT ATGGCGTGCC ACAGCTGATG CAAAGGCTCT GACCGCCATT GCTCTCTATG 421 AGATGGCTAA AAGAGATGGA CTGTTGTCTT GATCGACGAG TTAATAATTT CTCCTCCATT 481 ATATAACAAC TTACGATTGT ATGCTTTGCT GAAAAGATGA CGACTCTCTA TTTTAGGCAA 541 GTCTGCTTCT ACAGTATGAG CATTCCTAGG TGAACGCTCC GGGTAATTGC ATCTACTGTT 601 GCTTGGTATT GAA Predicted gene structure (within gDNA segment 86667 to 84347): Exon 1 86067 85841 ( 227 n); cDNA 1 227 ( 227 n); score: 1.000 Intron 1 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 85342 84957 ( 386 n); cDNA 228 613 ( 386 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E368105+ 1.000 613 1.000 C PGS_C08HBa0165B06.1-_SGN-E368105+ (86067 85841,85342 84957) Alignment (genomic DNA sequence = upper lines): TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 86008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 60 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 85948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 120 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 85888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 180 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGTA AGCATTCCAC 85828 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCT... .......... 227 CATCTTCTAT AAGACTCAGA TAACTCTCAG CGCATGCTTT CTTGGATTTT GTATTATAGG 85768 .......... .......... .......... .......... .......... .......... 227 AACAGAAAAA AGTAGAAATA TTTGCATTAA CAACTAGTTT CTGCTAAAAC TCTTATGGAA 85708 .......... .......... .......... .......... .......... .......... 227 ATGTATGTGT TGTAATATAT ATTTTTTTTA TTTCTGTTAG TCAATAATTT TGATTCATTG 85648 .......... .......... .......... .......... .......... .......... 227 CACTGCTTGC TTTACTGTTT GGAACCTGTA AATTGTAATG ACATTGGATA TTGCTCCATG 85588 .......... .......... .......... .......... .......... .......... 227 TGCACTTGCA ATTAGTGGTA TATTTGTGAA CCTTGCCCAT TGCACGGGGT AGGACTAGAC 85528 .......... .......... .......... .......... .......... .......... 227 CTGACTTTTT TTGTTAGAGA GGGAAAGGTT CGGAGTAGGC GCAACTACAT TGGATCTTTT 85468 .......... .......... .......... .......... .......... .......... 227 GTATGCAGCC AGCCTTATAT TGGGTGTATT TTTCAATTCA AAGATGAGGC CTTCTGTGAT 85408 .......... .......... .......... .......... .......... .......... 227 TGTTTCTGCC TTTATATATC TCTTAACACT ATATTTATGT GGTTTTGGTG TTCTTTCAAT 85348 .......... .......... .......... .......... .......... .......... 227 GTTAGGGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 85288 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....GGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 282 AGAAAATCCA ACAACTGCAA GGGAAAGAAA CCGGACTACG AGACCATGGT GAGCTGATCA 85228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAAATCCA ACAACTGCAA GGGAAAGAAA CCGGACTACG AGACCATGGT GAGCTGATCA 342 AAGTGCATGT GGTTCCATAT GATAAACTAT GGCGTGCCAC AGCTGATGCA AAGGCTCTGA 85168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGCATGT GGTTCCATAT GATAAACTAT GGCGTGCCAC AGCTGATGCA AAGGCTCTGA 402 CCGCCATTGC TCTCTATGAG ATGGCTAAAA GAGATGGACT GTTGTCTTGA TCGACGAGTT 85108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCATTGC TCTCTATGAG ATGGCTAAAA GAGATGGACT GTTGTCTTGA TCGACGAGTT 462 AATAATTTCT CCTCCATTAT ATAACAACTT ACGATTGTAT GCTTTGCTGA AAAGATGACG 85048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATTTCT CCTCCATTAT ATAACAACTT ACGATTGTAT GCTTTGCTGA AAAGATGACG 522 ACTCTCTATT TTAGGCAAGT CTGCTTCTAC AGTATGAGCA TTCCTAGGTG AACGCTCCGG 84988 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCTCTATT TTAGGCAAGT CTGCTTCTAC AGTATGAGCA TTCCTAGGTG AACGCTCCGG 582 GTAATTGCAT CTACTGTTGC TTGGTATTGA A 84957 |||||||||| |||||||||| |||||||||| | GTAATTGCAT CTACTGTTGC TTGGTATTGA A 613 hqPGS_C08HBa0165B06.1-_SGN-E368105+ (86067 85841,85342 84957) ******************************************************************************** EST sequence 385 +strand 354 n (File: SGN-E219510+) 1 TTTTTTTTTT TTTTTTTTTT GGGAGAGCAA CAAATGATTA CATTTATTTT TGATACATTA 61 GCTTGTCCAT CCAACTTAAA AGCATCATGA ATGTGAATGA TACAGACGTA GTAGTATACA 121 ATGATCAAAT GATTCTAAAG ATAATAAACT GTTCAGATTT TGCTGGTTGC TTCCCAGATA 181 GTTGTACCAT CACAAGTGCA AAGCTTCTTG TAGTTCTCAC CAACCCCGGC ACTTCTAGCT 241 ATCACTGCTG CTGTAAGTCC TGGGTCTGAT TTATCTTCAG TAGCATATAC AGCAATAGCT 301 CTCCCAATCA GGTCAGCAAC TCTCAGCTTC TCTTTAGGAC CGGAATAAAA TGCC Predicted gene structure (within gDNA segment 85559 to 83798): Exon 1 84739 84408 ( 332 n); cDNA 23 354 ( 332 n); score: 1.000 PPA cDNA 20 1 MATCH C08HBa0165B06.1- SGN-E219510+ 1.000 332 0.938 C PGS_C08HBa0165B06.1-_SGN-E219510+ (84739 84408) Alignment (genomic DNA sequence = upper lines): GAGAGCAACA AATGATTACA TTTATTTTTG ATACATTAGC TTGTCCATCC AACTTAAAAG 84680 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGCAACA AATGATTACA TTTATTTTTG ATACATTAGC TTGTCCATCC AACTTAAAAG 82 CATCATGAAT GTGAATGATA CAGACGTAGT AGTATACAAT GATCAAATGA TTCTAAAGAT 84620 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCATGAAT GTGAATGATA CAGACGTAGT AGTATACAAT GATCAAATGA TTCTAAAGAT 142 AATAAACTGT TCAGATTTTG CTGGTTGCTT CCCAGATAGT TGTACCATCA CAAGTGCAAA 84560 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAAACTGT TCAGATTTTG CTGGTTGCTT CCCAGATAGT TGTACCATCA CAAGTGCAAA 202 GCTTCTTGTA GTTCTCACCA ACCCCGGCAC TTCTAGCTAT CACTGCTGCT GTAAGTCCTG 84500 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTCTTGTA GTTCTCACCA ACCCCGGCAC TTCTAGCTAT CACTGCTGCT GTAAGTCCTG 262 GGTCTGATTT ATCTTCAGTA GCATATACAG CAATAGCTCT CCCAATCAGG TCAGCAACTC 84440 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCTGATTT ATCTTCAGTA GCATATACAG CAATAGCTCT CCCAATCAGG TCAGCAACTC 322 TCAGCTTCTC TTTAGGACCG GAATAAAATG CC 84408 |||||||||| |||||||||| |||||||||| || TCAGCTTCTC TTTAGGACCG GAATAAAATG CC 354 hqPGS_C08HBa0165B06.1-_SGN-E219510+ (84739 84408) ******************************************************************************** EST sequence 352 +strand 274 n (File: SGN-E277119+) 1 TTTTTTTTTT TTTTTTTTTT GAGAGCGGCG GTTTATTACA TTTATTTTTG ATCTATTAGC 61 TTGTCCATCC AACTTAAAAG CATCATGAAT GTGAATGATA CAGACGTAGT AGTATACAAT 121 GATCAAATGA TTCTAAAGAT AATAAACTGT TCAAATTTTG CTGGTTGCTT CCCAAATAGT 181 TGTACCATTA CAAGTGCAAA GCTTCTTGTA GTTCTCACCA ACCCTGGCAC TTCTAGCTAT 241 CACTGCTGCT GTAAGTCCTG GGTCTGATTT ATCT Predicted gene structure (within gDNA segment 85665 to 83876): Exon 1 84740 84486 ( 255 n); cDNA 20 274 ( 255 n); score: 0.953 PPA cDNA 19 1 MATCH C08HBa0165B06.1- SGN-E277119+ 0.953 255 0.931 C PGS_C08HBa0165B06.1-_SGN-E277119+ (84740 84486) Alignment (genomic DNA sequence = upper lines): TGAGAGCAAC AAATGATTAC ATTTATTTTT GATACATTAG CTTGTCCATC CAACTTAAAA 84681 ||||||| | | ||||| |||||||||| ||| ||||| |||||||||| |||||||||| TGAGAGCGGC GGTTTATTAC ATTTATTTTT GATCTATTAG CTTGTCCATC CAACTTAAAA 79 GCATCATGAA TGTGAATGAT ACAGACGTAG TAGTATACAA TGATCAAATG ATTCTAAAGA 84621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATCATGAA TGTGAATGAT ACAGACGTAG TAGTATACAA TGATCAAATG ATTCTAAAGA 139 TAATAAACTG TTCAGATTTT GCTGGTTGCT TCCCAGATAG TTGTACCATC ACAAGTGCAA 84561 |||||||||| |||| ||||| |||||||||| ||||| |||| ||||||||| |||||||||| TAATAAACTG TTCAAATTTT GCTGGTTGCT TCCCAAATAG TTGTACCATT ACAAGTGCAA 199 AGCTTCTTGT AGTTCTCACC AACCCCGGCA CTTCTAGCTA TCACTGCTGC TGTAAGTCCT 84501 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| AGCTTCTTGT AGTTCTCACC AACCCTGGCA CTTCTAGCTA TCACTGCTGC TGTAAGTCCT 259 GGGTCTGATT TATCT 84486 |||||||||| ||||| GGGTCTGATT TATCT 274 hqPGS_C08HBa0165B06.1-_SGN-E277119+ (84740 84486) ******************************************************************************** EST sequence 181 +strand 785 n (File: SGN-E264071+) 1 TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 61 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 121 AGGAATGCTA TTGAATCCTC ATTGTTCAAA CAGTGGTTAA AGAACATACA AACTGAAACA 181 GGACTGCTGG CTAATGGAGC GCTGTCTTTA AAACAAGTTC TTATCCAGGG TGTAGATATG 241 TTTGGAGAGC GTTTGGGGTT TCTAAAATTC AAAGCAGATA TTATTGATAA GGAAACGGGT 301 CAAAAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 361 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TTAGGGTCCC AGTTGGGAGG 421 CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC AAGGCGACTT TGCTGGAACA 481 GCAGTTCGAG AAGTTGAGGA AGAAACTGGA ATACACCTGA ATGTCCATGA TATGGTCGAT 541 CTCACGGCTT TTCTTGACGC GTCAACTGGG GGCAGAGTTT TTCCTTCTCC TGGTGGATGT 601 GATGAGGAAG ATGAGTTTGT TTCTCTACAG AGGAAATGTC AGCAAAGAGA AAATCCAACA 661 ACTGCAAGGG AAAGAAACCG GACTACGAGA CCATGGTGAG CTGATCAAAG TGCATGTGGT 721 TCATATATNA AAACTATGGC GTGCCACAGC TGATGCAAAG GCTCTGACCG CCATTGCTCT 781 CTATG Predicted gene structure (within gDNA segment 88938 to 84540): Exon 1 88338 88217 ( 122 n); cDNA 1 122 ( 122 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 123 228 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 229 306 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 307 399 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86391 ( 93 n); cDNA 400 492 ( 93 n); score: 1.000 Intron 5 86390 85940 ( 451 n); Pd: 0.000 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 6 85939 85841 ( 99 n); cDNA 493 591 ( 99 n); score: 1.000 Intron 6 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 0.95) Exon 7 85342 85150 ( 193 n); cDNA 592 785 ( 194 n); score: 0.959 MATCH C08HBa0165B06.1- SGN-E264071+ 0.990 784 0.999 C PGS_C08HBa0165B06.1-_SGN-E264071+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85841,85342 85150) Alignment (genomic DNA sequence = upper lines): TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 88279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 60 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 88219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 120 AGGCAAATCC CTCAACTTTT TATTTCATTT GCGATTCTAT TTTTAGCTAT CAATTTACCC 88159 || AG........ .......... .......... .......... .......... .......... 122 AATTCTTACT TAATAGGGCA TTTGTTGTGT GGGTTTTATA AGTTTTTCAT GATTTTTTAG 88099 .......... .......... .......... .......... .......... .......... 122 AAAAAAAAAA GAAGCAGCCT TTTCTATGAT AAAGATTAAG CAATTTTCTT GGCATGGATC 88039 .......... .......... .......... .......... .......... .......... 122 CATTTGGATA TACCTCAACA TGTTATTCTT TGTTTTCTTT TACTTATTCG GGTTCTACTT 87979 .......... .......... .......... .......... .......... .......... 122 TCATCTGTCA ATTTAAGTAA TTCACACTTG ATTCTTGTTA TGTCCTTTTT TTCTTTTTGG 87919 .......... .......... .......... .......... .......... .......... 122 GGTTCAAGTT TTAGCTTTCA GTTACGTAAT TCACTAGTAT GCCATTTGAG GTGAGGTTGT 87859 .......... .......... .......... .......... .......... .......... 122 AGAAGTAAAG ATTTTTAGTT ATGTTAAAGA TTAAACATTC TCTTGGGATG GCTTTGGATT 87799 .......... .......... .......... .......... .......... .......... 122 ATGTGGGCTG TTTGGATGCC ATTTGAGGTG AGGATTGTGC ATGATTTTCA GAAAAGGAAG 87739 .......... .......... .......... .......... .......... .......... 122 CATTTTTATG TTAAAGGATG GTTTGAGTGA ATTGTCTGTT TTCTTGTAGG AATGCTATTG 87679 | |||||||||| .......... .......... .......... .......... .........G AATGCTATTG 133 AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 87619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 193 ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAGGTTTC TATCTCAAGC TGTTCTGCTA 87559 |||||||||| |||||||||| |||||||||| ||||| ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAG..... .......... .......... 228 AACTATGAAG ATAGTAACCT TTACATGGTC AGTAGTTACA ATGAAATATA TTGTTGGCTA 87499 .......... .......... .......... .......... .......... .......... 228 ATGGGACCAT TAGAACACAA ATTGAGTTGC TTGAACCCTT CTAAATTTTT TCCACATTGG 87439 .......... .......... .......... .......... .......... .......... 228 ACAATTGGAG GAAAATGGTC TGTCTTCTGA TCATAACTGA TGCTGAGGCT CTTAATTATA 87379 .......... .......... .......... .......... .......... .......... 228 TCTTTATTTA GTATGTTTTG TCCTAACATT TATCAAAAGA ATGGATATCT AGGTTGATTG 87319 .......... .......... .......... .......... .......... .......... 228 TGCACTTTAT GCTCCTTAAA GATTCCTATG CTTCCCTAAC ATAGTTGTCA GTCGTGCTCC 87259 .......... .......... .......... .......... .......... .......... 228 CTCCTAAAGA GGATAAAAAG GAAGTCTTCT TGATGTACGT GTCTGAATTT TTGGAATGAT 87199 .......... .......... .......... .......... .......... .......... 228 GTTAACTCGC ACTATCAGCG ACCAAGAGTC CAAGACATAG TGACTATCAC AGGATTTGAA 87139 .......... .......... .......... .......... .......... .......... 228 ACTGCTTTTG GTCCTGCTAC CGCAAACATT AAGTTTGCTT TACAGCTGAC ATTCCTTTTT 87079 .......... .......... .......... .......... .......... .......... 228 ATGTGTTGGA GCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 87019 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 274 CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTATCTGA TTAGAATCTC TCCATCCCAT 86959 |||||||||| |||||||||| |||||||||| || CAGATATTAT TGATAAGGAA ACGGGTCAAA AG........ .......... .......... 306 TGGATATGTA ATTCATTCAG CCGGACTATG AATAGCTTCT CTTAAAGCTG TGTCCTCAAT 86899 .......... .......... .......... .......... .......... .......... 306 TTATTTTGCT TTGGTTTTTT TTCCTTGTAC CTTAGAGCAT TGAACAATAC AGTACTCGTG 86839 .......... .......... .......... .......... .......... .......... 306 ACATAGCTCG ACAATATTAG CATGACAATG ATGTATTACT TCCATTTTCC TTTTTCCTAG 86779 .......... .......... .......... .......... .......... .......... 306 CTTATCCTTG GTTGCAACAA GGGAAACTTC TTTCCTGTCA CTATCACCTC TTTTGTGTCT 86719 .......... .......... .......... .......... .......... .......... 306 AGGTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 86659 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 364 ATGAGGGTGA GACATATGCT GTGCTTACGG AACAGGTAGG TCTTCCAACT GTCAACTCCT 86599 |||||||||| |||||||||| |||||||||| ||||| ATGAGGGTGA GACATATGCT GTGCTTACGG AACAG..... .......... .......... 399 CCATTTTTAT AACGTCGAAA AATATCTCAC AGTACAGATA ATATGAGGAA ATTTATGAAA 86539 .......... .......... .......... .......... .......... .......... 399 GTTTTCTGTC CCTTTTACTG TTTAAACTCT AAAATACATT CAACCTGTTT GGAAGGTTAG 86479 ||||| .......... .......... .......... .......... .......... .....GTTAG 404 GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 86419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 464 CGACTTTGCT GGAACAGCAG TTCGAGAAGT CTCTCTCTCC CTTTCTATCA AAGCACTATC 86359 |||||||||| |||||||||| |||||||| CGACTTTGCT GGAACAGCAG TTCGAGAA.. .......... .......... .......... 492 CCCTTCTCAA AATTTTCTCA AGTGAGACAA GCTGTCCCCT TGTTTTTTTG GTGTTCAGTT 86299 .......... .......... .......... .......... .......... .......... 492 CCCTAGTATA TTAGTTTATT ATGGCATAAT GAACTGTATT CCTCTTATCG TGTCATTTTT 86239 .......... .......... .......... .......... .......... .......... 492 CAACAAATCA CTGGAAGTTC CTTCGTTTCT GAGCAAGTTC AATTGAATCC AGAAATCTGC 86179 .......... .......... .......... .......... .......... .......... 492 TAATGAAACT ATATGCGTGA CTAAACTGAA ATCCTTATAA GAACATCACA ACTTCCTTAT 86119 .......... .......... .......... .......... .......... .......... 492 CAAAAGCAAC TATTTGTTTT ACATATTTGA CAACTTAGTT GCACTCCACT GTATAATTAA 86059 .......... .......... .......... .......... .......... .......... 492 ATATTGAATA CTTTTGCATT TGAATATATA TCGGTTTTAG CGCGTGGATG GAAAAATCAG 85999 .......... .......... .......... .......... .......... .......... 492 AGAGTTTGAC ATTGCTTGGC TTAACTTATA ATTGAAGTAT TTGATCTAAT ATGATTCAGG 85939 | .......... .......... .......... .......... .......... .........G 493 TTGAGGAAGA AACTGGAATA CACCTGAATG TCCATGATAT GGTCGATCTC ACGGCTTTTC 85879 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGGAAGA AACTGGAATA CACCTGAATG TCCATGATAT GGTCGATCTC ACGGCTTTTC 553 TTGACGCGTC AACTGGGGGC AGAGTTTTTC CTTCTCCTGT AAGCATTCCA CCATCTTCTA 85819 |||||||||| |||||||||| |||||||||| |||||||| TTGACGCGTC AACTGGGGGC AGAGTTTTTC CTTCTCCT.. .......... .......... 591 TAAGACTCAG ATAACTCTCA GCGCATGCTT TCTTGGATTT TGTATTATAG GAACAGAAAA 85759 .......... .......... .......... .......... .......... .......... 591 AAGTAGAAAT ATTTGCATTA ACAACTAGTT TCTGCTAAAA CTCTTATGGA AATGTATGTG 85699 .......... .......... .......... .......... .......... .......... 591 TTGTAATATA TATTTTTTTT ATTTCTGTTA GTCAATAATT TTGATTCATT GCACTGCTTG 85639 .......... .......... .......... .......... .......... .......... 591 CTTTACTGTT TGGAACCTGT AAATTGTAAT GACATTGGAT ATTGCTCCAT GTGCACTTGC 85579 .......... .......... .......... .......... .......... .......... 591 AATTAGTGGT ATATTTGTGA ACCTTGCCCA TTGCACGGGG TAGGACTAGA CCTGACTTTT 85519 .......... .......... .......... .......... .......... .......... 591 TTTGTTAGAG AGGGAAAGGT TCGGAGTAGG CGCAACTACA TTGGATCTTT TGTATGCAGC 85459 .......... .......... .......... .......... .......... .......... 591 CAGCCTTATA TTGGGTGTAT TTTTCAATTC AAAGATGAGG CCTTCTGTGA TTGTTTCTGC 85399 .......... .......... .......... .......... .......... .......... 591 CTTTATATAT CTCTTAACAC TATATTTATG TGGTTTTGGT GTTCTTTCAA TGTTAGGGTG 85339 |||| .......... .......... .......... .......... .......... ......GGTG 595 GATGTGATGA GG-AGATGAG TTTGTTTCTC TACAGAGGAA ATGTCAGCAA AGAGAAAATC 85280 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGTGATGA GGAAGATGAG TTTGTTTCTC TACAGAGGAA ATGTCAGCAA AGAGAAAATC 655 CAACAACTGC AAGGGAAAGA AACCGGACTA CGAGACCATG GTGAGCTGAT CAAAGTGCAT 85220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACTGC AAGGGAAAGA AACCGGACTA CGAGACCATG GTGAGCTGAT CAAAGTGCAT 715 GTGGTTC-CA TATGATAAAC TATGGCGTGC CACAGCTGAT GCAAAGGCTC TGACCGCCAT 85161 ||||||| | ||| | |||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTTCATA TATNA-AAAC TATGGCGTGC CACAGCTGAT GCAAAGGCTC TGACCGCCAT 774 TGCTCTCTAT G 85150 |||||||||| | TGCTCTCTAT G 785 hqPGS_C08HBa0165B06.1-_SGN-E264071+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85841,85342 85150) ******************************************************************************** EST sequence 160 +strand 796 n (File: SGN-E263752+) 1 GCTAATGGAG CGCTGTCTTT AAAACAAGTT CTTATCCAGG GTGTAGATAT GTTTGGAGAG 61 CGTTTGGGGT TTCTAAAATT CAAAGCAGAT ATTATTGATA AGGAAACGGG TCAAAAGGTA 121 TCTGATTAGA ATCTCTCCAT CCCATTGGAT ATGTAATTCA TTCAGCCGGA CTATGAATAG 181 CTTCTCTTAA AGCTGTGTCC TCAATTTATT TTGCTTTGGT TTTTTTTCCT TGTACCTTAG 241 AGCATTGAAC AATACAGTAC TCGTGACATA GCTCGACAAT ATTAGCATGA CAATGATGTA 301 TTACTTCCAT TTTCCTTTTT CCTAGCTTAT CCTTGGTTGC AACAAGGGAA ACTTCTTTCC 361 TGTCACTATC ACCTCTTTTG TGTCTAGGTT CCTGGTATTG TCTTCGCACG GGGTCCAGCT 421 GTTGCAGTTC TAATCCTTTT GGATTATGAG GGTGAGACAT ATGCTGTGCT TACGGAACAG 481 GTTAGGGTCC CAGTTGGGAG GCTAATTTTG GAATTGCCAG CAGGAATGTT GGATGATGAC 541 CAAGGCGACT TTGCTGGAAC AGCAGTTCGA GAAGTTGAGG AAGAAACTGG AATACACCTG 601 AATGTCCATG ATATGGTCGA TCTCACGGCT TTTCTTGACG CGTCAACTGG GGGCAGAGTT 661 TTTCCTTCTC CTGGTGGATG TGATGAGGGA AAATGAGTTT GTTTCTCTAC AGAGGAAATG 721 TCAGCAAAGA GAAAATCCAC AACTGCAAGG GAAAGAAACC GGACTACGAG AACATGGTGA 781 GCTGATCAAA GTGCAT Predicted gene structure (within gDNA segment 88222 to 84610): Exon 1 87622 87584 ( 39 n); cDNA 1 39 ( 39 n); score: 1.000 Intron 1 87583 87065 ( 519 n); Pd: 0.977 (s: 0), Pa: 0.997 (s: 1.00) Exon 2 87064 86624 ( 441 n); cDNA 40 480 ( 441 n); score: 1.000 Intron 2 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 3 86483 86391 ( 93 n); cDNA 481 573 ( 93 n); score: 1.000 Intron 3 86390 85940 ( 451 n); Pd: 0.000 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 4 85939 85841 ( 99 n); cDNA 574 672 ( 99 n); score: 1.000 Intron 4 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 0.88) Exon 5 85342 85220 ( 123 n); cDNA 673 796 ( 124 n); score: 0.935 MATCH C08HBa0165B06.1- SGN-E263752+ 0.989 795 0.999 C PGS_C08HBa0165B06.1-_SGN-E263752+ (87622 87584,87064 86624,86483 86391,85939 85841,85342 85220) Alignment (genomic DNA sequence = upper lines): GCTAATGGAG CGCTGTCTTT AAAACAAGTT CTTATCCAGG TTTCTATCTC AAGCTGTTCT 87563 |||||||||| |||||||||| |||||||||| ||||||||| GCTAATGGAG CGCTGTCTTT AAAACAAGTT CTTATCCAG. .......... .......... 39 GCTAAACTAT GAAGATAGTA ACCTTTACAT GGTCAGTAGT TACAATGAAA TATATTGTTG 87503 .......... .......... .......... .......... .......... .......... 39 GCTAATGGGA CCATTAGAAC ACAAATTGAG TTGCTTGAAC CCTTCTAAAT TTTTTCCACA 87443 .......... .......... .......... .......... .......... .......... 39 TTGGACAATT GGAGGAAAAT GGTCTGTCTT CTGATCATAA CTGATGCTGA GGCTCTTAAT 87383 .......... .......... .......... .......... .......... .......... 39 TATATCTTTA TTTAGTATGT TTTGTCCTAA CATTTATCAA AAGAATGGAT ATCTAGGTTG 87323 .......... .......... .......... .......... .......... .......... 39 ATTGTGCACT TTATGCTCCT TAAAGATTCC TATGCTTCCC TAACATAGTT GTCAGTCGTG 87263 .......... .......... .......... .......... .......... .......... 39 CTCCCTCCTA AAGAGGATAA AAAGGAAGTC TTCTTGATGT ACGTGTCTGA ATTTTTGGAA 87203 .......... .......... .......... .......... .......... .......... 39 TGATGTTAAC TCGCACTATC AGCGACCAAG AGTCCAAGAC ATAGTGACTA TCACAGGATT 87143 .......... .......... .......... .......... .......... .......... 39 TGAAACTGCT TTTGGTCCTG CTACCGCAAA CATTAAGTTT GCTTTACAGC TGACATTCCT 87083 .......... .......... .......... .......... .......... .......... 39 TTTTATGTGT TGGAGCAGGG TGTAGATATG TTTGGAGAGC GTTTGGGGTT TCTAAAATTC 87023 || |||||||||| |||||||||| |||||||||| |||||||||| .......... ........GG TGTAGATATG TTTGGAGAGC GTTTGGGGTT TCTAAAATTC 81 AAAGCAGATA TTATTGATAA GGAAACGGGT CAAAAGGTAT CTGATTAGAA TCTCTCCATC 86963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCAGATA TTATTGATAA GGAAACGGGT CAAAAGGTAT CTGATTAGAA TCTCTCCATC 141 CCATTGGATA TGTAATTCAT TCAGCCGGAC TATGAATAGC TTCTCTTAAA GCTGTGTCCT 86903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTGGATA TGTAATTCAT TCAGCCGGAC TATGAATAGC TTCTCTTAAA GCTGTGTCCT 201 CAATTTATTT TGCTTTGGTT TTTTTTCCTT GTACCTTAGA GCATTGAACA ATACAGTACT 86843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTTATTT TGCTTTGGTT TTTTTTCCTT GTACCTTAGA GCATTGAACA ATACAGTACT 261 CGTGACATAG CTCGACAATA TTAGCATGAC AATGATGTAT TACTTCCATT TTCCTTTTTC 86783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGACATAG CTCGACAATA TTAGCATGAC AATGATGTAT TACTTCCATT TTCCTTTTTC 321 CTAGCTTATC CTTGGTTGCA ACAAGGGAAA CTTCTTTCCT GTCACTATCA CCTCTTTTGT 86723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCTTATC CTTGGTTGCA ACAAGGGAAA CTTCTTTCCT GTCACTATCA CCTCTTTTGT 381 GTCTAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 86663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 441 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TAGGTCTTCC AACTGTCAAC 86603 |||||||||| |||||||||| |||||||||| ||||||||| GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAG. .......... .......... 480 TCCTCCATTT TTATAACGTC GAAAAATATC TCACAGTACA GATAATATGA GGAAATTTAT 86543 .......... .......... .......... .......... .......... .......... 480 GAAAGTTTTC TGTCCCTTTT ACTGTTTAAA CTCTAAAATA CATTCAACCT GTTTGGAAGG 86483 | .......... .......... .......... .......... .......... .........G 481 TTAGGGTCCC AGTTGGGAGG CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC 86423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGGGTCCC AGTTGGGAGG CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC 541 AAGGCGACTT TGCTGGAACA GCAGTTCGAG AAGTCTCTCT CTCCCTTTCT ATCAAAGCAC 86363 |||||||||| |||||||||| |||||||||| || AAGGCGACTT TGCTGGAACA GCAGTTCGAG AA........ .......... .......... 573 TATCCCCTTC TCAAAATTTT CTCAAGTGAG ACAAGCTGTC CCCTTGTTTT TTTGGTGTTC 86303 .......... .......... .......... .......... .......... .......... 573 AGTTCCCTAG TATATTAGTT TATTATGGCA TAATGAACTG TATTCCTCTT ATCGTGTCAT 86243 .......... .......... .......... .......... .......... .......... 573 TTTTCAACAA ATCACTGGAA GTTCCTTCGT TTCTGAGCAA GTTCAATTGA ATCCAGAAAT 86183 .......... .......... .......... .......... .......... .......... 573 CTGCTAATGA AACTATATGC GTGACTAAAC TGAAATCCTT ATAAGAACAT CACAACTTCC 86123 .......... .......... .......... .......... .......... .......... 573 TTATCAAAAG CAACTATTTG TTTTACATAT TTGACAACTT AGTTGCACTC CACTGTATAA 86063 .......... .......... .......... .......... .......... .......... 573 TTAAATATTG AATACTTTTG CATTTGAATA TATATCGGTT TTAGCGCGTG GATGGAAAAA 86003 .......... .......... .......... .......... .......... .......... 573 TCAGAGAGTT TGACATTGCT TGGCTTAACT TATAATTGAA GTATTTGATC TAATATGATT 85943 .......... .......... .......... .......... .......... .......... 573 CAGGTTGAGG AAGAAACTGG AATACACCTG AATGTCCATG ATATGGTCGA TCTCACGGCT 85883 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ...GTTGAGG AAGAAACTGG AATACACCTG AATGTCCATG ATATGGTCGA TCTCACGGCT 630 TTTCTTGACG CGTCAACTGG GGGCAGAGTT TTTCCTTCTC CTGTAAGCAT TCCACCATCT 85823 |||||||||| |||||||||| |||||||||| |||||||||| || TTTCTTGACG CGTCAACTGG GGGCAGAGTT TTTCCTTCTC CT........ .......... 672 TCTATAAGAC TCAGATAACT CTCAGCGCAT GCTTTCTTGG ATTTTGTATT ATAGGAACAG 85763 .......... .......... .......... .......... .......... .......... 672 AAAAAAGTAG AAATATTTGC ATTAACAACT AGTTTCTGCT AAAACTCTTA TGGAAATGTA 85703 .......... .......... .......... .......... .......... .......... 672 TGTGTTGTAA TATATATTTT TTTTATTTCT GTTAGTCAAT AATTTTGATT CATTGCACTG 85643 .......... .......... .......... .......... .......... .......... 672 CTTGCTTTAC TGTTTGGAAC CTGTAAATTG TAATGACATT GGATATTGCT CCATGTGCAC 85583 .......... .......... .......... .......... .......... .......... 672 TTGCAATTAG TGGTATATTT GTGAACCTTG CCCATTGCAC GGGGTAGGAC TAGACCTGAC 85523 .......... .......... .......... .......... .......... .......... 672 TTTTTTTGTT AGAGAGGGAA AGGTTCGGAG TAGGCGCAAC TACATTGGAT CTTTTGTATG 85463 .......... .......... .......... .......... .......... .......... 672 CAGCCAGCCT TATATTGGGT GTATTTTTCA ATTCAAAGAT GAGGCCTTCT GTGATTGTTT 85403 .......... .......... .......... .......... .......... .......... 672 CTGCCTTTAT ATATCTCTTA ACACTATATT TATGTGGTTT TGGTGTTCTT TCAATGTTAG 85343 .......... .......... .......... .......... .......... .......... 672 GGTGGATGTG ATGA-GG-AG ATGAGTTTGT TTCTCTACAG AGGAAATGTC AGCAAAGAGA 85285 |||||||||| |||| || | |||||||||| |||||||||| |||||||||| |||||||||| GGTGGATGTG ATGAGGGAAA ATGAGTTTGT TTCTCTACAG AGGAAATGTC AGCAAAGAGA 732 AAATCCAACA ACTGCAAGGG AAAGAAACCG GACTACGAGA CCATGGTGAG CTGATCAAAG 85225 |||||| ||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AAATCC-ACA ACTGCAAGGG AAAGAAACCG GACTACGAGA ACATGGTGAG CTGATCAAAG 791 TGCAT 85220 ||||| TGCAT 796 hqPGS_C08HBa0165B06.1-_SGN-E263752+ (87622 87584,87064 86624,86483 86391,85939 85841,85342 85220) ******************************************************************************** EST sequence 383 +strand 288 n (File: SGN-E240797+) 1 TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 61 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 121 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 181 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGGT GGATGTGATG 241 AGGAGATGAG TTTGTTTCTC TACAGAGGAA ATGTCAGCAA AGAGAAAA Predicted gene structure (within gDNA segment 86667 to 84672): Exon 1 86067 85841 ( 227 n); cDNA 1 227 ( 227 n); score: 1.000 Intron 1 85840 85343 ( 498 n); Pd: 0.825 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 85342 85282 ( 61 n); cDNA 228 288 ( 61 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E240797+ 1.000 288 1.000 C PGS_C08HBa0165B06.1-_SGN-E240797+ (86067 85841,85342 85282) Alignment (genomic DNA sequence = upper lines): TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 86008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATTAAA TATTGAATAC TTTTGCATTT GAATATATAT CGGTTTTAGC GCGTGGATGG 60 AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 85948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCAGA GAGTTTGACA TTGCTTGGCT TAACTTATAA TTGAAGTATT TGATCTAATA 120 TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 85888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTCAGGT TGAGGAAGAA ACTGGAATAC ACCTGAATGT CCATGATATG GTCGATCTCA 180 CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCTGTA AGCATTCCAC 85828 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CGGCTTTTCT TGACGCGTCA ACTGGGGGCA GAGTTTTTCC TTCTCCT... .......... 227 CATCTTCTAT AAGACTCAGA TAACTCTCAG CGCATGCTTT CTTGGATTTT GTATTATAGG 85768 .......... .......... .......... .......... .......... .......... 227 AACAGAAAAA AGTAGAAATA TTTGCATTAA CAACTAGTTT CTGCTAAAAC TCTTATGGAA 85708 .......... .......... .......... .......... .......... .......... 227 ATGTATGTGT TGTAATATAT ATTTTTTTTA TTTCTGTTAG TCAATAATTT TGATTCATTG 85648 .......... .......... .......... .......... .......... .......... 227 CACTGCTTGC TTTACTGTTT GGAACCTGTA AATTGTAATG ACATTGGATA TTGCTCCATG 85588 .......... .......... .......... .......... .......... .......... 227 TGCACTTGCA ATTAGTGGTA TATTTGTGAA CCTTGCCCAT TGCACGGGGT AGGACTAGAC 85528 .......... .......... .......... .......... .......... .......... 227 CTGACTTTTT TTGTTAGAGA GGGAAAGGTT CGGAGTAGGC GCAACTACAT TGGATCTTTT 85468 .......... .......... .......... .......... .......... .......... 227 GTATGCAGCC AGCCTTATAT TGGGTGTATT TTTCAATTCA AAGATGAGGC CTTCTGTGAT 85408 .......... .......... .......... .......... .......... .......... 227 TGTTTCTGCC TTTATATATC TCTTAACACT ATATTTATGT GGTTTTGGTG TTCTTTCAAT 85348 .......... .......... .......... .......... .......... .......... 227 GTTAGGGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 85288 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....GGTGG ATGTGATGAG GAGATGAGTT TGTTTCTCTA CAGAGGAAAT GTCAGCAAAG 282 AGAAAA 85282 |||||| AGAAAA 288 hqPGS_C08HBa0165B06.1-_SGN-E240797+ (86067 85841,85342 85282) ******************************************************************************** EST sequence 368 +strand 571 n (File: SGN-E258195+) 1 TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 61 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 121 AGGAATGCTA TTGAATCCTC ATTGTTCAAA CAGTGGTTAA AGAACATACA AACTGAAACA 181 GGACTGCTGG CTAATGGAGC GCTGTCTTTA AAACAAGTTC TTATCCAGGG TGTAGATATG 241 TTTGGAGAGC GTTTGGGGTT TCTAAAATTC AAAGCAGATA TTATTGATAA GGAAACGGGT 301 CAAAAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 361 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TTAGGGTCCC AGTTGGGAGG 421 CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC AAGGCGACTT TGCTGGAACA 481 GCAGTTCGAG AAGTTGAGGA AGAAACTGGA ATACACCTGA ATGTCCATGA TATGGTCGAT 541 CTCACGGCTT TTCTTGACGC GTCAACTGGG G Predicted gene structure (within gDNA segment 88938 to 85251): Exon 1 88338 88217 ( 122 n); cDNA 1 122 ( 122 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 123 228 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 229 306 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 307 399 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86391 ( 93 n); cDNA 400 492 ( 93 n); score: 1.000 Intron 5 86390 85940 ( 451 n); Pd: 0.000 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 6 85939 85861 ( 79 n); cDNA 493 571 ( 79 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E258195+ 1.000 571 1.000 C PGS_C08HBa0165B06.1-_SGN-E258195+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85861) Alignment (genomic DNA sequence = upper lines): TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 88279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 60 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 88219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 120 AGGCAAATCC CTCAACTTTT TATTTCATTT GCGATTCTAT TTTTAGCTAT CAATTTACCC 88159 || AG........ .......... .......... .......... .......... .......... 122 AATTCTTACT TAATAGGGCA TTTGTTGTGT GGGTTTTATA AGTTTTTCAT GATTTTTTAG 88099 .......... .......... .......... .......... .......... .......... 122 AAAAAAAAAA GAAGCAGCCT TTTCTATGAT AAAGATTAAG CAATTTTCTT GGCATGGATC 88039 .......... .......... .......... .......... .......... .......... 122 CATTTGGATA TACCTCAACA TGTTATTCTT TGTTTTCTTT TACTTATTCG GGTTCTACTT 87979 .......... .......... .......... .......... .......... .......... 122 TCATCTGTCA ATTTAAGTAA TTCACACTTG ATTCTTGTTA TGTCCTTTTT TTCTTTTTGG 87919 .......... .......... .......... .......... .......... .......... 122 GGTTCAAGTT TTAGCTTTCA GTTACGTAAT TCACTAGTAT GCCATTTGAG GTGAGGTTGT 87859 .......... .......... .......... .......... .......... .......... 122 AGAAGTAAAG ATTTTTAGTT ATGTTAAAGA TTAAACATTC TCTTGGGATG GCTTTGGATT 87799 .......... .......... .......... .......... .......... .......... 122 ATGTGGGCTG TTTGGATGCC ATTTGAGGTG AGGATTGTGC ATGATTTTCA GAAAAGGAAG 87739 .......... .......... .......... .......... .......... .......... 122 CATTTTTATG TTAAAGGATG GTTTGAGTGA ATTGTCTGTT TTCTTGTAGG AATGCTATTG 87679 | |||||||||| .......... .......... .......... .......... .........G AATGCTATTG 133 AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 87619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 193 ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAGGTTTC TATCTCAAGC TGTTCTGCTA 87559 |||||||||| |||||||||| |||||||||| ||||| ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAG..... .......... .......... 228 AACTATGAAG ATAGTAACCT TTACATGGTC AGTAGTTACA ATGAAATATA TTGTTGGCTA 87499 .......... .......... .......... .......... .......... .......... 228 ATGGGACCAT TAGAACACAA ATTGAGTTGC TTGAACCCTT CTAAATTTTT TCCACATTGG 87439 .......... .......... .......... .......... .......... .......... 228 ACAATTGGAG GAAAATGGTC TGTCTTCTGA TCATAACTGA TGCTGAGGCT CTTAATTATA 87379 .......... .......... .......... .......... .......... .......... 228 TCTTTATTTA GTATGTTTTG TCCTAACATT TATCAAAAGA ATGGATATCT AGGTTGATTG 87319 .......... .......... .......... .......... .......... .......... 228 TGCACTTTAT GCTCCTTAAA GATTCCTATG CTTCCCTAAC ATAGTTGTCA GTCGTGCTCC 87259 .......... .......... .......... .......... .......... .......... 228 CTCCTAAAGA GGATAAAAAG GAAGTCTTCT TGATGTACGT GTCTGAATTT TTGGAATGAT 87199 .......... .......... .......... .......... .......... .......... 228 GTTAACTCGC ACTATCAGCG ACCAAGAGTC CAAGACATAG TGACTATCAC AGGATTTGAA 87139 .......... .......... .......... .......... .......... .......... 228 ACTGCTTTTG GTCCTGCTAC CGCAAACATT AAGTTTGCTT TACAGCTGAC ATTCCTTTTT 87079 .......... .......... .......... .......... .......... .......... 228 ATGTGTTGGA GCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 87019 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 274 CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTATCTGA TTAGAATCTC TCCATCCCAT 86959 |||||||||| |||||||||| |||||||||| || CAGATATTAT TGATAAGGAA ACGGGTCAAA AG........ .......... .......... 306 TGGATATGTA ATTCATTCAG CCGGACTATG AATAGCTTCT CTTAAAGCTG TGTCCTCAAT 86899 .......... .......... .......... .......... .......... .......... 306 TTATTTTGCT TTGGTTTTTT TTCCTTGTAC CTTAGAGCAT TGAACAATAC AGTACTCGTG 86839 .......... .......... .......... .......... .......... .......... 306 ACATAGCTCG ACAATATTAG CATGACAATG ATGTATTACT TCCATTTTCC TTTTTCCTAG 86779 .......... .......... .......... .......... .......... .......... 306 CTTATCCTTG GTTGCAACAA GGGAAACTTC TTTCCTGTCA CTATCACCTC TTTTGTGTCT 86719 .......... .......... .......... .......... .......... .......... 306 AGGTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 86659 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 364 ATGAGGGTGA GACATATGCT GTGCTTACGG AACAGGTAGG TCTTCCAACT GTCAACTCCT 86599 |||||||||| |||||||||| |||||||||| ||||| ATGAGGGTGA GACATATGCT GTGCTTACGG AACAG..... .......... .......... 399 CCATTTTTAT AACGTCGAAA AATATCTCAC AGTACAGATA ATATGAGGAA ATTTATGAAA 86539 .......... .......... .......... .......... .......... .......... 399 GTTTTCTGTC CCTTTTACTG TTTAAACTCT AAAATACATT CAACCTGTTT GGAAGGTTAG 86479 ||||| .......... .......... .......... .......... .......... .....GTTAG 404 GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 86419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 464 CGACTTTGCT GGAACAGCAG TTCGAGAAGT CTCTCTCTCC CTTTCTATCA AAGCACTATC 86359 |||||||||| |||||||||| |||||||| CGACTTTGCT GGAACAGCAG TTCGAGAA.. .......... .......... .......... 492 CCCTTCTCAA AATTTTCTCA AGTGAGACAA GCTGTCCCCT TGTTTTTTTG GTGTTCAGTT 86299 .......... .......... .......... .......... .......... .......... 492 CCCTAGTATA TTAGTTTATT ATGGCATAAT GAACTGTATT CCTCTTATCG TGTCATTTTT 86239 .......... .......... .......... .......... .......... .......... 492 CAACAAATCA CTGGAAGTTC CTTCGTTTCT GAGCAAGTTC AATTGAATCC AGAAATCTGC 86179 .......... .......... .......... .......... .......... .......... 492 TAATGAAACT ATATGCGTGA CTAAACTGAA ATCCTTATAA GAACATCACA ACTTCCTTAT 86119 .......... .......... .......... .......... .......... .......... 492 CAAAAGCAAC TATTTGTTTT ACATATTTGA CAACTTAGTT GCACTCCACT GTATAATTAA 86059 .......... .......... .......... .......... .......... .......... 492 ATATTGAATA CTTTTGCATT TGAATATATA TCGGTTTTAG CGCGTGGATG GAAAAATCAG 85999 .......... .......... .......... .......... .......... .......... 492 AGAGTTTGAC ATTGCTTGGC TTAACTTATA ATTGAAGTAT TTGATCTAAT ATGATTCAGG 85939 | .......... .......... .......... .......... .......... .........G 493 TTGAGGAAGA AACTGGAATA CACCTGAATG TCCATGATAT GGTCGATCTC ACGGCTTTTC 85879 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGGAAGA AACTGGAATA CACCTGAATG TCCATGATAT GGTCGATCTC ACGGCTTTTC 553 TTGACGCGTC AACTGGGG 85861 |||||||||| |||||||| TTGACGCGTC AACTGGGG 571 hqPGS_C08HBa0165B06.1-_SGN-E258195+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85861) ******************************************************************************** EST sequence 190 +strand 645 n (File: SGN-E327843+) 1 TGGTATTGTC TTCACACGGG GTCCAGCTGT TGCAGTTCTA ATCCTTTTGG ATTATGAGGG 61 TGAGACATAT GCTGTGCTTA CCGAACAAGT TAGGGACCCA GTTGGGAGGC TAATTTTGGA 121 ATTGCCAGCA AGAATGTTGG ATGATGACCA AGGCGACTTT GCTGGAACAG CAGCTCGAGA 181 AGTCTCTCTC TCCCTTTCTA TCAAAGCACT ATCCCCTTCT CAAAATTTTC TCAAGTGAGA 241 CAAGCTGTCC CCTTGTTTTT TTGGTGATCA GCTCCCTAGT ATATTAGTTT ATTATGGCAT 301 AATGAACTGT ATTCCTCTTA TCGTGTCATT TTTCAACGAA TCACTGGAAG TTCCTTCGTT 361 TCTGATCGAG TTCAATTGAA TCCGGAAATC TGCTAATGAA ACTATATGCG TGACTAAACT 421 GACATCCTTA TAAGAACATC ACAACTTCCT TATCAAAAGC AACTATTTGC TTTACATATT 481 TGACAACTTA CTTGCACTCC ACTGTATAAT TAGATATTGA ATACTTTTGC ATTTGCATAT 541 ATATCGGTTT TAGCGCGTGG ATGGATACAT CANAGAGTCT GACATTGCTT GGCTTACTTA 601 TAATTGAAGT ATTTGATCTA ATATGATTCA GGTTGAGGAA GAAAC Predicted gene structure (within gDNA segment 87437 to 85316): Exon 1 86711 86624 ( 88 n); cDNA 1 88 ( 88 n); score: 0.966 Intron 1 86623 86484 ( 140 n); Pd: 0.993 (s: 0.96), Pa: 0.990 (s: 0.96) Exon 2 86483 85926 ( 558 n); cDNA 89 645 ( 557 n); score: 0.966 MATCH C08HBa0165B06.1- SGN-E327843+ 0.966 646 1.002 C PGS_C08HBa0165B06.1-_SGN-E327843+ (86711 86624,86483 85926) Alignment (genomic DNA sequence = upper lines): TGGTATTGTC TTCGCACGGG GTCCAGCTGT TGCAGTTCTA ATCCTTTTGG ATTATGAGGG 86652 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTATTGTC TTCACACGGG GTCCAGCTGT TGCAGTTCTA ATCCTTTTGG ATTATGAGGG 60 TGAGACATAT GCTGTGCTTA CGGAACAGGT AGGTCTTCCA ACTGTCAACT CCTCCATTTT 86592 |||||||||| |||||||||| | ||||| TGAGACATAT GCTGTGCTTA CCGAACAA.. .......... .......... .......... 88 TATAACGTCG AAAAATATCT CACAGTACAG ATAATATGAG GAAATTTATG AAAGTTTTCT 86532 .......... .......... .......... .......... .......... .......... 88 GTCCCTTTTA CTGTTTAAAC TCTAAAATAC ATTCAACCTG TTTGGAAGGT TAGGGTCCCA 86472 || ||||| |||| .......... .......... .......... .......... ........GT TAGGGACCCA 100 GTTGGGAGGC TAATTTTGGA ATTGCCAGCA GGAATGTTGG ATGATGACCA AGGCGACTTT 86412 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GTTGGGAGGC TAATTTTGGA ATTGCCAGCA AGAATGTTGG ATGATGACCA AGGCGACTTT 160 GCTGGAACAG CAGTTCGAGA AGTCTCTCTC TCCCTTTCTA TCAAAGCACT ATCCCCTTCT 86352 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGGAACAG CAGCTCGAGA AGTCTCTCTC TCCCTTTCTA TCAAAGCACT ATCCCCTTCT 220 CAAAATTTTC TCAAGTGAGA CAAGCTGTCC CCTTGTTTTT TTGGTGTTCA GTTCCCTAGT 86292 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| | |||||||| CAAAATTTTC TCAAGTGAGA CAAGCTGTCC CCTTGTTTTT TTGGTGATCA GCTCCCTAGT 280 ATATTAGTTT ATTATGGCAT AATGAACTGT ATTCCTCTTA TCGTGTCATT TTTCAACAAA 86232 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ATATTAGTTT ATTATGGCAT AATGAACTGT ATTCCTCTTA TCGTGTCATT TTTCAACGAA 340 TCACTGGAAG TTCCTTCGTT TCTGAGCAAG TTCAATTGAA TCCAGAAATC TGCTAATGAA 86172 |||||||||| |||||||||| ||||| | || |||||||||| ||| |||||| |||||||||| TCACTGGAAG TTCCTTCGTT TCTGATCGAG TTCAATTGAA TCCGGAAATC TGCTAATGAA 400 ACTATATGCG TGACTAAACT GAAATCCTTA TAAGAACATC ACAACTTCCT TATCAAAAGC 86112 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| ACTATATGCG TGACTAAACT GACATCCTTA TAAGAACATC ACAACTTCCT TATCAAAAGC 460 AACTATTTGT TTTACATATT TGACAACTTA GTTGCACTCC ACTGTATAAT TAAATATTGA 86052 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| || ||||||| AACTATTTGC TTTACATATT TGACAACTTA CTTGCACTCC ACTGTATAAT TAGATATTGA 520 ATACTTTTGC ATTTGAATAT ATATCGGTTT TAGCGCGTGG ATGGAAAAAT CAGAGAGTTT 85992 |||||||||| ||||| |||| |||||||||| |||||||||| ||||| | || || ||||| | ATACTTTTGC ATTTGCATAT ATATCGGTTT TAGCGCGTGG ATGGATACAT CANAGAGTCT 580 GACATTGCTT GGCTTAACTT ATAATTGAAG TATTTGATCT AATATGATTC AGGTTGAGGA 85932 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTGCTT GGCTT-ACTT ATAATTGAAG TATTTGATCT AATATGATTC AGGTTGAGGA 639 AGAAAC 85926 |||||| AGAAAC 645 hqPGS_C08HBa0165B06.1-_SGN-E327843+ (86711 86624,86483 85926) ******************************************************************************** EST sequence 172 +strand 659 n (File: SGN-E346095+) 1 TCTTTTGTGT CTAGGTTCCT GGTATTGTCT TCGCACGGGG TCCAGCTGTT GCAGTTCTAA 61 TCCTTTTGGA TTATGAGGGT GAGACATATG CTGTGCTTAC GGAACAGGTT AGGGTCCCAG 121 TTGGGAGGCT AATTTTGGAA TTGCCAGCAG GAATGTTGGA TGATGACCAA GGCGACTTTG 181 CTGGAACAGC AGTTCGAGAA GTCTCTCTCT CCCTTTCTAT CAAAGCACTA TCCCCTTCTC 241 AAAATTTTCT CAAGTGAGAC AAGCTGTCCC CTTGTTTTTT TGGTGTTCAG TTCCCTAGTA 301 TATTAGTTTA TTATGGCATA ATGAACTGTA TTCCTCTTAT CGTGTCATTT TTCAACAAAT 361 CACTGGAAGT TCCTTCGTTT CTGAGCAAGT TCAATTGAAT CCAGAAATCT GCTAATGAAA 421 CTATATGCGT GACTAAACTG AAATCCTTAT AAGAACATCA CAACTTCCTT ATCAAAAGCA 481 ACTATTTGTT TTACATATTT GACAACTTAG TTGCACTCCA CTGTATAATT AAATATTGAA 541 TACTTTTGCA TTTGAATATA TATCGGTTNT AGCGCGTGGA TGGAAAAATC AGAGAGTTTG 601 ACATTGCTTG GCTTAACTTA TAATTGAAGT ATTTGATCTA ATATGATTCA GGTTGAGGA Predicted gene structure (within gDNA segment 87330 to 85322): Exon 1 86730 86624 ( 107 n); cDNA 1 107 ( 107 n); score: 1.000 Intron 1 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 2 86483 85932 ( 552 n); cDNA 108 659 ( 552 n); score: 0.998 MATCH C08HBa0165B06.1- SGN-E346095+ 0.998 659 1.000 C PGS_C08HBa0165B06.1-_SGN-E346095+ (86730 86624,86483 85932) Alignment (genomic DNA sequence = upper lines): TCTTTTGTGT CTAGGTTCCT GGTATTGTCT TCGCACGGGG TCCAGCTGTT GCAGTTCTAA 86671 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTTGTGT CTAGGTTCCT GGTATTGTCT TCGCACGGGG TCCAGCTGTT GCAGTTCTAA 60 TCCTTTTGGA TTATGAGGGT GAGACATATG CTGTGCTTAC GGAACAGGTA GGTCTTCCAA 86611 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TCCTTTTGGA TTATGAGGGT GAGACATATG CTGTGCTTAC GGAACAG... .......... 107 CTGTCAACTC CTCCATTTTT ATAACGTCGA AAAATATCTC ACAGTACAGA TAATATGAGG 86551 .......... .......... .......... .......... .......... .......... 107 AAATTTATGA AAGTTTTCTG TCCCTTTTAC TGTTTAAACT CTAAAATACA TTCAACCTGT 86491 .......... .......... .......... .......... .......... .......... 107 TTGGAAGGTT AGGGTCCCAG TTGGGAGGCT AATTTTGGAA TTGCCAGCAG GAATGTTGGA 86431 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......GTT AGGGTCCCAG TTGGGAGGCT AATTTTGGAA TTGCCAGCAG GAATGTTGGA 160 TGATGACCAA GGCGACTTTG CTGGAACAGC AGTTCGAGAA GTCTCTCTCT CCCTTTCTAT 86371 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGACCAA GGCGACTTTG CTGGAACAGC AGTTCGAGAA GTCTCTCTCT CCCTTTCTAT 220 CAAAGCACTA TCCCCTTCTC AAAATTTTCT CAAGTGAGAC AAGCTGTCCC CTTGTTTTTT 86311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGCACTA TCCCCTTCTC AAAATTTTCT CAAGTGAGAC AAGCTGTCCC CTTGTTTTTT 280 TGGTGTTCAG TTCCCTAGTA TATTAGTTTA TTATGGCATA ATGAACTGTA TTCCTCTTAT 86251 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGTTCAG TTCCCTAGTA TATTAGTTTA TTATGGCATA ATGAACTGTA TTCCTCTTAT 340 CGTGTCATTT TTCAACAAAT CACTGGAAGT TCCTTCGTTT CTGAGCAAGT TCAATTGAAT 86191 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGTCATTT TTCAACAAAT CACTGGAAGT TCCTTCGTTT CTGAGCAAGT TCAATTGAAT 400 CCAGAAATCT GCTAATGAAA CTATATGCGT GACTAAACTG AAATCCTTAT AAGAACATCA 86131 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGAAATCT GCTAATGAAA CTATATGCGT GACTAAACTG AAATCCTTAT AAGAACATCA 460 CAACTTCCTT ATCAAAAGCA ACTATTTGTT TTACATATTT GACAACTTAG TTGCACTCCA 86071 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACTTCCTT ATCAAAAGCA ACTATTTGTT TTACATATTT GACAACTTAG TTGCACTCCA 520 CTGTATAATT AAATATTGAA TACTTTTGCA TTTGAATATA TATCGGTTTT AGCGCGTGGA 86011 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| CTGTATAATT AAATATTGAA TACTTTTGCA TTTGAATATA TATCGGTTNT AGCGCGTGGA 580 TGGAAAAATC AGAGAGTTTG ACATTGCTTG GCTTAACTTA TAATTGAAGT ATTTGATCTA 85951 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAAAATC AGAGAGTTTG ACATTGCTTG GCTTAACTTA TAATTGAAGT ATTTGATCTA 640 ATATGATTCA GGTTGAGGA 85932 |||||||||| ||||||||| ATATGATTCA GGTTGAGGA 659 hqPGS_C08HBa0165B06.1-_SGN-E346095+ (86730 86624,86483 85932) ******************************************************************************** EST sequence 230 +strand 497 n (File: SGN-E254685+) 1 TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 61 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 121 AGGAATGCTA TTGAATCCTC ATTGTTCAAA CAGTGGTTAA AGAACATACA AACTGAAACA 181 GGACTGCTGG CTAATGGAGC GCTGTCTTTA AAACAAGTTC TTATCCAGGG TGTAGATATG 241 TTTGGAGAGC GTTTGGGGTT TCTAAAATTC AAAGCAGATA TTATTGATAA GGAAACGGGT 301 CAAAAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 361 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TTAGGGTCCC AGTTGGGAGG 421 CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC AAGGCGACTT TGCTGGAACA 481 GCAATTCGAG AAGTTGA Predicted gene structure (within gDNA segment 88938 to 85650): Exon 1 88338 88217 ( 122 n); cDNA 1 122 ( 122 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 123 228 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 229 306 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 307 399 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86389 ( 95 n); cDNA 400 494 ( 95 n); score: 0.989 MATCH C08HBa0165B06.1- SGN-E254685+ 0.998 494 0.994 C PGS_C08HBa0165B06.1-_SGN-E254685+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) Alignment (genomic DNA sequence = upper lines): TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 88279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 60 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 88219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 120 AGGCAAATCC CTCAACTTTT TATTTCATTT GCGATTCTAT TTTTAGCTAT CAATTTACCC 88159 || AG........ .......... .......... .......... .......... .......... 122 AATTCTTACT TAATAGGGCA TTTGTTGTGT GGGTTTTATA AGTTTTTCAT GATTTTTTAG 88099 .......... .......... .......... .......... .......... .......... 122 AAAAAAAAAA GAAGCAGCCT TTTCTATGAT AAAGATTAAG CAATTTTCTT GGCATGGATC 88039 .......... .......... .......... .......... .......... .......... 122 CATTTGGATA TACCTCAACA TGTTATTCTT TGTTTTCTTT TACTTATTCG GGTTCTACTT 87979 .......... .......... .......... .......... .......... .......... 122 TCATCTGTCA ATTTAAGTAA TTCACACTTG ATTCTTGTTA TGTCCTTTTT TTCTTTTTGG 87919 .......... .......... .......... .......... .......... .......... 122 GGTTCAAGTT TTAGCTTTCA GTTACGTAAT TCACTAGTAT GCCATTTGAG GTGAGGTTGT 87859 .......... .......... .......... .......... .......... .......... 122 AGAAGTAAAG ATTTTTAGTT ATGTTAAAGA TTAAACATTC TCTTGGGATG GCTTTGGATT 87799 .......... .......... .......... .......... .......... .......... 122 ATGTGGGCTG TTTGGATGCC ATTTGAGGTG AGGATTGTGC ATGATTTTCA GAAAAGGAAG 87739 .......... .......... .......... .......... .......... .......... 122 CATTTTTATG TTAAAGGATG GTTTGAGTGA ATTGTCTGTT TTCTTGTAGG AATGCTATTG 87679 | |||||||||| .......... .......... .......... .......... .........G AATGCTATTG 133 AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 87619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 193 ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAGGTTTC TATCTCAAGC TGTTCTGCTA 87559 |||||||||| |||||||||| |||||||||| ||||| ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAG..... .......... .......... 228 AACTATGAAG ATAGTAACCT TTACATGGTC AGTAGTTACA ATGAAATATA TTGTTGGCTA 87499 .......... .......... .......... .......... .......... .......... 228 ATGGGACCAT TAGAACACAA ATTGAGTTGC TTGAACCCTT CTAAATTTTT TCCACATTGG 87439 .......... .......... .......... .......... .......... .......... 228 ACAATTGGAG GAAAATGGTC TGTCTTCTGA TCATAACTGA TGCTGAGGCT CTTAATTATA 87379 .......... .......... .......... .......... .......... .......... 228 TCTTTATTTA GTATGTTTTG TCCTAACATT TATCAAAAGA ATGGATATCT AGGTTGATTG 87319 .......... .......... .......... .......... .......... .......... 228 TGCACTTTAT GCTCCTTAAA GATTCCTATG CTTCCCTAAC ATAGTTGTCA GTCGTGCTCC 87259 .......... .......... .......... .......... .......... .......... 228 CTCCTAAAGA GGATAAAAAG GAAGTCTTCT TGATGTACGT GTCTGAATTT TTGGAATGAT 87199 .......... .......... .......... .......... .......... .......... 228 GTTAACTCGC ACTATCAGCG ACCAAGAGTC CAAGACATAG TGACTATCAC AGGATTTGAA 87139 .......... .......... .......... .......... .......... .......... 228 ACTGCTTTTG GTCCTGCTAC CGCAAACATT AAGTTTGCTT TACAGCTGAC ATTCCTTTTT 87079 .......... .......... .......... .......... .......... .......... 228 ATGTGTTGGA GCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 87019 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 274 CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTATCTGA TTAGAATCTC TCCATCCCAT 86959 |||||||||| |||||||||| |||||||||| || CAGATATTAT TGATAAGGAA ACGGGTCAAA AG........ .......... .......... 306 TGGATATGTA ATTCATTCAG CCGGACTATG AATAGCTTCT CTTAAAGCTG TGTCCTCAAT 86899 .......... .......... .......... .......... .......... .......... 306 TTATTTTGCT TTGGTTTTTT TTCCTTGTAC CTTAGAGCAT TGAACAATAC AGTACTCGTG 86839 .......... .......... .......... .......... .......... .......... 306 ACATAGCTCG ACAATATTAG CATGACAATG ATGTATTACT TCCATTTTCC TTTTTCCTAG 86779 .......... .......... .......... .......... .......... .......... 306 CTTATCCTTG GTTGCAACAA GGGAAACTTC TTTCCTGTCA CTATCACCTC TTTTGTGTCT 86719 .......... .......... .......... .......... .......... .......... 306 AGGTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 86659 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 364 ATGAGGGTGA GACATATGCT GTGCTTACGG AACAGGTAGG TCTTCCAACT GTCAACTCCT 86599 |||||||||| |||||||||| |||||||||| ||||| ATGAGGGTGA GACATATGCT GTGCTTACGG AACAG..... .......... .......... 399 CCATTTTTAT AACGTCGAAA AATATCTCAC AGTACAGATA ATATGAGGAA ATTTATGAAA 86539 .......... .......... .......... .......... .......... .......... 399 GTTTTCTGTC CCTTTTACTG TTTAAACTCT AAAATACATT CAACCTGTTT GGAAGGTTAG 86479 ||||| .......... .......... .......... .......... .......... .....GTTAG 404 GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 86419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 464 CGACTTTGCT GGAACAGCAG TTCGAGAAGT 86389 |||||||||| ||||||||| |||||||||| CGACTTTGCT GGAACAGCAA TTCGAGAAGT 494 hqPGS_C08HBa0165B06.1-_SGN-E254685+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) ******************************************************************************** EST sequence 231 +strand 497 n (File: SGN-E254686+) 1 TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAGTCTCCCT 61 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 121 AGGAATGCTA TTGAATCCTC ATTGTTCAAA CAGTGGTTAA AGAACATACA AACTGAAACA 181 GGACTGCTGG CTAATGGAGC GCTGTCTTTA AAACAAGTTC TTATCCAGGG TGTAGATATG 241 TTTGGAGAGC GTTTGGGGTT TCTAAAATTC AAAGCAGATA TTATTGATAA GGAAACGGGT 301 CAAAAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 361 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TTAGGGTCCC AGTTGGGAGG 421 CTAATTTTGG AATTGCCAGC AGGAATGTTG GATGATGACC AAGGCGACTT TGCTGGAACA 481 GCAGTTCGAG AAGTTGA Predicted gene structure (within gDNA segment 88938 to 85749): Exon 1 88338 88217 ( 122 n); cDNA 1 122 ( 122 n); score: 0.984 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 123 228 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 229 306 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 307 399 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86389 ( 95 n); cDNA 400 494 ( 95 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E254686+ 0.996 494 0.994 C PGS_C08HBa0165B06.1-_SGN-E254686+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) Alignment (genomic DNA sequence = upper lines): TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 88279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || |||||| TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAGTCTCCCT 60 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 88219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 120 AGGCAAATCC CTCAACTTTT TATTTCATTT GCGATTCTAT TTTTAGCTAT CAATTTACCC 88159 || AG........ .......... .......... .......... .......... .......... 122 AATTCTTACT TAATAGGGCA TTTGTTGTGT GGGTTTTATA AGTTTTTCAT GATTTTTTAG 88099 .......... .......... .......... .......... .......... .......... 122 AAAAAAAAAA GAAGCAGCCT TTTCTATGAT AAAGATTAAG CAATTTTCTT GGCATGGATC 88039 .......... .......... .......... .......... .......... .......... 122 CATTTGGATA TACCTCAACA TGTTATTCTT TGTTTTCTTT TACTTATTCG GGTTCTACTT 87979 .......... .......... .......... .......... .......... .......... 122 TCATCTGTCA ATTTAAGTAA TTCACACTTG ATTCTTGTTA TGTCCTTTTT TTCTTTTTGG 87919 .......... .......... .......... .......... .......... .......... 122 GGTTCAAGTT TTAGCTTTCA GTTACGTAAT TCACTAGTAT GCCATTTGAG GTGAGGTTGT 87859 .......... .......... .......... .......... .......... .......... 122 AGAAGTAAAG ATTTTTAGTT ATGTTAAAGA TTAAACATTC TCTTGGGATG GCTTTGGATT 87799 .......... .......... .......... .......... .......... .......... 122 ATGTGGGCTG TTTGGATGCC ATTTGAGGTG AGGATTGTGC ATGATTTTCA GAAAAGGAAG 87739 .......... .......... .......... .......... .......... .......... 122 CATTTTTATG TTAAAGGATG GTTTGAGTGA ATTGTCTGTT TTCTTGTAGG AATGCTATTG 87679 | |||||||||| .......... .......... .......... .......... .........G AATGCTATTG 133 AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 87619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 193 ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAGGTTTC TATCTCAAGC TGTTCTGCTA 87559 |||||||||| |||||||||| |||||||||| ||||| ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAG..... .......... .......... 228 AACTATGAAG ATAGTAACCT TTACATGGTC AGTAGTTACA ATGAAATATA TTGTTGGCTA 87499 .......... .......... .......... .......... .......... .......... 228 ATGGGACCAT TAGAACACAA ATTGAGTTGC TTGAACCCTT CTAAATTTTT TCCACATTGG 87439 .......... .......... .......... .......... .......... .......... 228 ACAATTGGAG GAAAATGGTC TGTCTTCTGA TCATAACTGA TGCTGAGGCT CTTAATTATA 87379 .......... .......... .......... .......... .......... .......... 228 TCTTTATTTA GTATGTTTTG TCCTAACATT TATCAAAAGA ATGGATATCT AGGTTGATTG 87319 .......... .......... .......... .......... .......... .......... 228 TGCACTTTAT GCTCCTTAAA GATTCCTATG CTTCCCTAAC ATAGTTGTCA GTCGTGCTCC 87259 .......... .......... .......... .......... .......... .......... 228 CTCCTAAAGA GGATAAAAAG GAAGTCTTCT TGATGTACGT GTCTGAATTT TTGGAATGAT 87199 .......... .......... .......... .......... .......... .......... 228 GTTAACTCGC ACTATCAGCG ACCAAGAGTC CAAGACATAG TGACTATCAC AGGATTTGAA 87139 .......... .......... .......... .......... .......... .......... 228 ACTGCTTTTG GTCCTGCTAC CGCAAACATT AAGTTTGCTT TACAGCTGAC ATTCCTTTTT 87079 .......... .......... .......... .......... .......... .......... 228 ATGTGTTGGA GCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 87019 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 274 CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTATCTGA TTAGAATCTC TCCATCCCAT 86959 |||||||||| |||||||||| |||||||||| || CAGATATTAT TGATAAGGAA ACGGGTCAAA AG........ .......... .......... 306 TGGATATGTA ATTCATTCAG CCGGACTATG AATAGCTTCT CTTAAAGCTG TGTCCTCAAT 86899 .......... .......... .......... .......... .......... .......... 306 TTATTTTGCT TTGGTTTTTT TTCCTTGTAC CTTAGAGCAT TGAACAATAC AGTACTCGTG 86839 .......... .......... .......... .......... .......... .......... 306 ACATAGCTCG ACAATATTAG CATGACAATG ATGTATTACT TCCATTTTCC TTTTTCCTAG 86779 .......... .......... .......... .......... .......... .......... 306 CTTATCCTTG GTTGCAACAA GGGAAACTTC TTTCCTGTCA CTATCACCTC TTTTGTGTCT 86719 .......... .......... .......... .......... .......... .......... 306 AGGTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 86659 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 364 ATGAGGGTGA GACATATGCT GTGCTTACGG AACAGGTAGG TCTTCCAACT GTCAACTCCT 86599 |||||||||| |||||||||| |||||||||| ||||| ATGAGGGTGA GACATATGCT GTGCTTACGG AACAG..... .......... .......... 399 CCATTTTTAT AACGTCGAAA AATATCTCAC AGTACAGATA ATATGAGGAA ATTTATGAAA 86539 .......... .......... .......... .......... .......... .......... 399 GTTTTCTGTC CCTTTTACTG TTTAAACTCT AAAATACATT CAACCTGTTT GGAAGGTTAG 86479 ||||| .......... .......... .......... .......... .......... .....GTTAG 404 GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 86419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATGACCAAGG 464 CGACTTTGCT GGAACAGCAG TTCGAGAAGT 86389 |||||||||| |||||||||| |||||||||| CGACTTTGCT GGAACAGCAG TTCGAGAAGT 494 hqPGS_C08HBa0165B06.1-_SGN-E254686+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) ******************************************************************************** EST sequence 263 +strand 511 n (File: SGN-E200587+) 1 AACCCCTTTT CCTCTTCTTC TTCAAACCTT TGGCCCATAA ATTGTTCTGG AAGCTTCTCT 61 GTAAAAATGT CAACAACCCC ACCTTCTCAA ATCGCTGACA TCATCAATCT CCCCACCCAA 121 CTCGACCAAC CGGTTTCTGT TGTCGCTGCT CCCGGCGTCT CCGATACTCA CTTCACGAAT 181 GCTATTGAAT CCTCATTGTT CAAACAGTGG TTAAAGAACA TACAAACTGA AACAGGACTG 241 CTGGCTAATG GAGCGCTGTC TTTAAAACAA GTTCTTATCC AGGGTGTACA TATGTTTGGA 301 GAGCGTTTGG GGTTTCTAAA ATTCAAAGCA GATATTATTG ATAAGGAAAC GGGTCAAAAG 361 GTTCCTGGTA TTGTCTTCGC ACGGGGTCCA GCTGTTGCAG CTCTAATCCT TTTGGATTAT 421 GAGGGTGAGA CATATGCTGT GCTTACGGAA CAGGTTAGGG TCCCAGTTGG GAGGCTAATT 481 TTGGAATTGC CAGCAGGAAT GTTGGATGAT G Predicted gene structure (within gDNA segment 89064 to 85816): Exon 1 88390 88217 ( 174 n); cDNA 3 176 ( 174 n); score: 0.989 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 0.98), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 177 282 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 0.98) Exon 3 87064 86987 ( 78 n); cDNA 283 360 ( 78 n); score: 0.987 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 0.98) Exon 4 86716 86624 ( 93 n); cDNA 361 453 ( 93 n); score: 0.989 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86426 ( 58 n); cDNA 454 511 ( 58 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E200587+ 0.992 509 0.996 C PGS_C08HBa0165B06.1-_SGN-E200587+ (88390 88217,87689 87584,87064 86987,86716 86624,86483 86426) Alignment (genomic DNA sequence = upper lines): CCCCTTTTCC TCTTCTTCTT CAAACCTTTG GCCCAGAAAT TGTTCTGGAA GCTTCTCTGT 88331 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| CCCCTTTTCC TCTTCTTCTT CAAACCTTTG GCCCATAAAT TGTTCTGGAA GCTTCTCTGT 62 AAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC ATCAATCTCC CCACCCAACT 88271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC ATCAATCTCC CCACCCAACT 122 CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC GATACTCACT TCAGGCAAAT 88211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC GATACTCACT TCAC...... 176 CCCTCAACTT TTTATTTCAT TTGCGATTCT ATTTTTAGCT ATCAATTTAC CCAATTCTTA 88151 .......... .......... .......... .......... .......... .......... 176 CTTAATAGGG CATTTGTTGT GTGGGTTTTA TAAGTTTTTC ATGATTTTTT AGAAAAAAAA 88091 .......... .......... .......... .......... .......... .......... 176 AAGAAGCAGC CTTTTCTATG ATAAAGATTA AGCAATTTTC TTGGCATGGA TCCATTTGGA 88031 .......... .......... .......... .......... .......... .......... 176 TATACCTCAA CATGTTATTC TTTGTTTTCT TTTACTTATT CGGGTTCTAC TTTCATCTGT 87971 .......... .......... .......... .......... .......... .......... 176 CAATTTAAGT AATTCACACT TGATTCTTGT TATGTCCTTT TTTTCTTTTT GGGGTTCAAG 87911 .......... .......... .......... .......... .......... .......... 176 TTTTAGCTTT CAGTTACGTA ATTCACTAGT ATGCCATTTG AGGTGAGGTT GTAGAAGTAA 87851 .......... .......... .......... .......... .......... .......... 176 AGATTTTTAG TTATGTTAAA GATTAAACAT TCTCTTGGGA TGGCTTTGGA TTATGTGGGC 87791 .......... .......... .......... .......... .......... .......... 176 TGTTTGGATG CCATTTGAGG TGAGGATTGT GCATGATTTT CAGAAAAGGA AGCATTTTTA 87731 .......... .......... .......... .......... .......... .......... 176 TGTTAAAGGA TGGTTTGAGT GAATTGTCTG TTTTCTTGTA GGAATGCTAT TGAATCCTCA 87671 ||||||||| |||||||||| .......... .......... .......... .......... .GAATGCTAT TGAATCCTCA 195 TTGTTCAAAC AGTGGTTAAA GAACATACAA ACTGAAACAG GACTGCTGGC TAATGGAGCG 87611 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTCAAAC AGTGGTTAAA GAACATACAA ACTGAAACAG GACTGCTGGC TAATGGAGCG 255 CTGTCTTTAA AACAAGTTCT TATCCAGGTT TCTATCTCAA GCTGTTCTGC TAAACTATGA 87551 |||||||||| |||||||||| ||||||| CTGTCTTTAA AACAAGTTCT TATCCAG... .......... .......... .......... 282 AGATAGTAAC CTTTACATGG TCAGTAGTTA CAATGAAATA TATTGTTGGC TAATGGGACC 87491 .......... .......... .......... .......... .......... .......... 282 ATTAGAACAC AAATTGAGTT GCTTGAACCC TTCTAAATTT TTTCCACATT GGACAATTGG 87431 .......... .......... .......... .......... .......... .......... 282 AGGAAAATGG TCTGTCTTCT GATCATAACT GATGCTGAGG CTCTTAATTA TATCTTTATT 87371 .......... .......... .......... .......... .......... .......... 282 TAGTATGTTT TGTCCTAACA TTTATCAAAA GAATGGATAT CTAGGTTGAT TGTGCACTTT 87311 .......... .......... .......... .......... .......... .......... 282 ATGCTCCTTA AAGATTCCTA TGCTTCCCTA ACATAGTTGT CAGTCGTGCT CCCTCCTAAA 87251 .......... .......... .......... .......... .......... .......... 282 GAGGATAAAA AGGAAGTCTT CTTGATGTAC GTGTCTGAAT TTTTGGAATG ATGTTAACTC 87191 .......... .......... .......... .......... .......... .......... 282 GCACTATCAG CGACCAAGAG TCCAAGACAT AGTGACTATC ACAGGATTTG AAACTGCTTT 87131 .......... .......... .......... .......... .......... .......... 282 TGGTCCTGCT ACCGCAAACA TTAAGTTTGC TTTACAGCTG ACATTCCTTT TTATGTGTTG 87071 .......... .......... .......... .......... .......... .......... 282 GAGCAGGGTG TAGATATGTT TGGAGAGCGT TTGGGGTTTC TAAAATTCAA AGCAGATATT 87011 |||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GGTG TACATATGTT TGGAGAGCGT TTGGGGTTTC TAAAATTCAA AGCAGATATT 336 ATTGATAAGG AAACGGGTCA AAAGGTATCT GATTAGAATC TCTCCATCCC ATTGGATATG 86951 |||||||||| |||||||||| |||| ATTGATAAGG AAACGGGTCA AAAG...... .......... .......... .......... 360 TAATTCATTC AGCCGGACTA TGAATAGCTT CTCTTAAAGC TGTGTCCTCA ATTTATTTTG 86891 .......... .......... .......... .......... .......... .......... 360 CTTTGGTTTT TTTTCCTTGT ACCTTAGAGC ATTGAACAAT ACAGTACTCG TGACATAGCT 86831 .......... .......... .......... .......... .......... .......... 360 CGACAATATT AGCATGACAA TGATGTATTA CTTCCATTTT CCTTTTTCCT AGCTTATCCT 86771 .......... .......... .......... .......... .......... .......... 360 TGGTTGCAAC AAGGGAAACT TCTTTCCTGT CACTATCACC TCTTTTGTGT CTAGGTTCCT 86711 |||||| .......... .......... .......... .......... .......... ....GTTCCT 366 GGTATTGTCT TCGCACGGGG TCCAGCTGTT GCAGTTCTAA TCCTTTTGGA TTATGAGGGT 86651 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GGTATTGTCT TCGCACGGGG TCCAGCTGTT GCAGCTCTAA TCCTTTTGGA TTATGAGGGT 426 GAGACATATG CTGTGCTTAC GGAACAGGTA GGTCTTCCAA CTGTCAACTC CTCCATTTTT 86591 |||||||||| |||||||||| ||||||| GAGACATATG CTGTGCTTAC GGAACAG... .......... .......... .......... 453 ATAACGTCGA AAAATATCTC ACAGTACAGA TAATATGAGG AAATTTATGA AAGTTTTCTG 86531 .......... .......... .......... .......... .......... .......... 453 TCCCTTTTAC TGTTTAAACT CTAAAATACA TTCAACCTGT TTGGAAGGTT AGGGTCCCAG 86471 ||| |||||||||| .......... .......... .......... .......... .......GTT AGGGTCCCAG 466 TTGGGAGGCT AATTTTGGAA TTGCCAGCAG GAATGTTGGA TGATG 86426 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TTGGGAGGCT AATTTTGGAA TTGCCAGCAG GAATGTTGGA TGATG 511 hqPGS_C08HBa0165B06.1-_SGN-E200587+ (88390 88217,87689 87584,87064 86987,86716 86624,86483 86426) ******************************************************************************** EST sequence 220 +strand 457 n (File: SGN-E254683+) 1 TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CGATCTCCCC 61 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 121 AGGAATGCTA TTGAATCCTC ATTGTTCAAA CAGTGGTTAA AGAACATACA AACTGAAACA 181 GGACTGCTGG CTAATGGAGC GCTGTCTTTA AAACAAGTTC TTATCCAGGG TGTAGATATG 241 TTTGGAGAGC GTTTGGGGTT TCTAAAATTC AAAGCAGATA TTATTGATAA GGAAACGGGT 301 CAAAAGGTTC CTGGTATTGT CTTCGCACGG GGTCCAGCTG TTGCAGTTCT AATCCTTTTG 361 GATTATGAGG GTGAGACATA TGCTGTGCTT ACGGAACAGG TTAGGGTCCC AGTTGGGAGG 421 CTAATTTTGG AATTGCCAGC AAGAATGTTG GATGATG Predicted gene structure (within gDNA segment 88938 to 85672): Exon 1 88338 88217 ( 122 n); cDNA 1 122 ( 122 n); score: 0.992 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 123 228 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 229 306 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 307 399 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 0.98) Exon 5 86483 86426 ( 58 n); cDNA 400 457 ( 58 n); score: 0.983 MATCH C08HBa0165B06.1- SGN-E254683+ 0.996 457 1.000 C PGS_C08HBa0165B06.1-_SGN-E254683+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86426) Alignment (genomic DNA sequence = upper lines): TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CAATCTCCCC 88279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TTCTCTGTAA AAATGTCAAC AACCCCACCT TCTCAAATCG CTGACATCAT CGATCTCCCC 60 ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 88219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAACTCG ACCAACCGGT TTCTGTTGTC GCTGCTCCCG GCGTCTCCGA TACTCACTTC 120 AGGCAAATCC CTCAACTTTT TATTTCATTT GCGATTCTAT TTTTAGCTAT CAATTTACCC 88159 || AG........ .......... .......... .......... .......... .......... 122 AATTCTTACT TAATAGGGCA TTTGTTGTGT GGGTTTTATA AGTTTTTCAT GATTTTTTAG 88099 .......... .......... .......... .......... .......... .......... 122 AAAAAAAAAA GAAGCAGCCT TTTCTATGAT AAAGATTAAG CAATTTTCTT GGCATGGATC 88039 .......... .......... .......... .......... .......... .......... 122 CATTTGGATA TACCTCAACA TGTTATTCTT TGTTTTCTTT TACTTATTCG GGTTCTACTT 87979 .......... .......... .......... .......... .......... .......... 122 TCATCTGTCA ATTTAAGTAA TTCACACTTG ATTCTTGTTA TGTCCTTTTT TTCTTTTTGG 87919 .......... .......... .......... .......... .......... .......... 122 GGTTCAAGTT TTAGCTTTCA GTTACGTAAT TCACTAGTAT GCCATTTGAG GTGAGGTTGT 87859 .......... .......... .......... .......... .......... .......... 122 AGAAGTAAAG ATTTTTAGTT ATGTTAAAGA TTAAACATTC TCTTGGGATG GCTTTGGATT 87799 .......... .......... .......... .......... .......... .......... 122 ATGTGGGCTG TTTGGATGCC ATTTGAGGTG AGGATTGTGC ATGATTTTCA GAAAAGGAAG 87739 .......... .......... .......... .......... .......... .......... 122 CATTTTTATG TTAAAGGATG GTTTGAGTGA ATTGTCTGTT TTCTTGTAGG AATGCTATTG 87679 | |||||||||| .......... .......... .......... .......... .........G AATGCTATTG 133 AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 87619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCTCATT GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA 193 ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAGGTTTC TATCTCAAGC TGTTCTGCTA 87559 |||||||||| |||||||||| |||||||||| ||||| ATGGAGCGCT GTCTTTAAAA CAAGTTCTTA TCCAG..... .......... .......... 228 AACTATGAAG ATAGTAACCT TTACATGGTC AGTAGTTACA ATGAAATATA TTGTTGGCTA 87499 .......... .......... .......... .......... .......... .......... 228 ATGGGACCAT TAGAACACAA ATTGAGTTGC TTGAACCCTT CTAAATTTTT TCCACATTGG 87439 .......... .......... .......... .......... .......... .......... 228 ACAATTGGAG GAAAATGGTC TGTCTTCTGA TCATAACTGA TGCTGAGGCT CTTAATTATA 87379 .......... .......... .......... .......... .......... .......... 228 TCTTTATTTA GTATGTTTTG TCCTAACATT TATCAAAAGA ATGGATATCT AGGTTGATTG 87319 .......... .......... .......... .......... .......... .......... 228 TGCACTTTAT GCTCCTTAAA GATTCCTATG CTTCCCTAAC ATAGTTGTCA GTCGTGCTCC 87259 .......... .......... .......... .......... .......... .......... 228 CTCCTAAAGA GGATAAAAAG GAAGTCTTCT TGATGTACGT GTCTGAATTT TTGGAATGAT 87199 .......... .......... .......... .......... .......... .......... 228 GTTAACTCGC ACTATCAGCG ACCAAGAGTC CAAGACATAG TGACTATCAC AGGATTTGAA 87139 .......... .......... .......... .......... .......... .......... 228 ACTGCTTTTG GTCCTGCTAC CGCAAACATT AAGTTTGCTT TACAGCTGAC ATTCCTTTTT 87079 .......... .......... .......... .......... .......... .......... 228 ATGTGTTGGA GCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 87019 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA AAATTCAAAG 274 CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTATCTGA TTAGAATCTC TCCATCCCAT 86959 |||||||||| |||||||||| |||||||||| || CAGATATTAT TGATAAGGAA ACGGGTCAAA AG........ .......... .......... 306 TGGATATGTA ATTCATTCAG CCGGACTATG AATAGCTTCT CTTAAAGCTG TGTCCTCAAT 86899 .......... .......... .......... .......... .......... .......... 306 TTATTTTGCT TTGGTTTTTT TTCCTTGTAC CTTAGAGCAT TGAACAATAC AGTACTCGTG 86839 .......... .......... .......... .......... .......... .......... 306 ACATAGCTCG ACAATATTAG CATGACAATG ATGTATTACT TCCATTTTCC TTTTTCCTAG 86779 .......... .......... .......... .......... .......... .......... 306 CTTATCCTTG GTTGCAACAA GGGAAACTTC TTTCCTGTCA CTATCACCTC TTTTGTGTCT 86719 .......... .......... .......... .......... .......... .......... 306 AGGTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 86659 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GTTCCTGG TATTGTCTTC GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT 364 ATGAGGGTGA GACATATGCT GTGCTTACGG AACAGGTAGG TCTTCCAACT GTCAACTCCT 86599 |||||||||| |||||||||| |||||||||| ||||| ATGAGGGTGA GACATATGCT GTGCTTACGG AACAG..... .......... .......... 399 CCATTTTTAT AACGTCGAAA AATATCTCAC AGTACAGATA ATATGAGGAA ATTTATGAAA 86539 .......... .......... .......... .......... .......... .......... 399 GTTTTCTGTC CCTTTTACTG TTTAAACTCT AAAATACATT CAACCTGTTT GGAAGGTTAG 86479 ||||| .......... .......... .......... .......... .......... .....GTTAG 404 GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA ATGTTGGATG ATG 86426 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| ||| GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAAGA ATGTTGGATG ATG 457 hqPGS_C08HBa0165B06.1-_SGN-E254683+ (88338 88217,87689 87584,87064 86987,86716 86624,86483 86426) ******************************************************************************** EST sequence 139 +strand 540 n (File: SGN-E550949+) 1 GTGCCACGTT TTGGACTTCC ATTCTTGAAA CCTCTCTATG AATTCCCCTT TTCCTCTTCT 61 TCTTCAAACC TTTGGCCCAG AAATTGTTCT GGAAGCTTCT CTGTAAAAAT GTCAACAACC 121 CCACCTTCTC AAATCGCTGA CATCATCAAT CTCCCCACCC AACTCGACCA ACCGGTTTCT 181 GTTGTCGCTG CTCCCGGCGT CTCCGATACT CACTTCAGGA ATGCTATTGA ATCCTCATTG 241 TTCAAACAGT GGTTAAAGAA CATACAAACT GAAACAGGAC TGCTGGCTAA TGGAGCGCTG 301 TCTTTAAAAC AAGTTCTTAT CCAGGGTGTA GATATGTTTG GAGAGCGTTT GGGGTTTCTA 361 AAATTCAAAG CAGATATTAT TGATAAGGAA ACGGGTCAAA AGGTTCCTGG TATTGTCTTC 421 GCACGGGGTC CAGCTGTTGC AGTTCTAATC CTTTTGGATT ATGAGGGTGA GACATATGCT 481 GTGCTTACGG AACAGGTTAG GGTCCCAGTT GGGAGGCTAA TTTTGGAATT GCCAGCAGGA Predicted gene structure (within gDNA segment 89034 to 85829): Exon 1 88434 88217 ( 218 n); cDNA 1 218 ( 218 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 219 324 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 325 402 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86624 ( 93 n); cDNA 403 495 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 86483 86439 ( 45 n); cDNA 496 540 ( 45 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E550949+ 1.000 540 1.000 C PGS_C08HBa0165B06.1-_SGN-E550949+ (88434 88217,87689 87584,87064 86987,86716 86624,86483 86439) Alignment (genomic DNA sequence = upper lines): GTGCCACGTT TTGGACTTCC ATTCTTGAAA CCTCTCTATG AATTCCCCTT TTCCTCTTCT 88375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCCACGTT TTGGACTTCC ATTCTTGAAA CCTCTCTATG AATTCCCCTT TTCCTCTTCT 60 TCTTCAAACC TTTGGCCCAG AAATTGTTCT GGAAGCTTCT CTGTAAAAAT GTCAACAACC 88315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCAAACC TTTGGCCCAG AAATTGTTCT GGAAGCTTCT CTGTAAAAAT GTCAACAACC 120 CCACCTTCTC AAATCGCTGA CATCATCAAT CTCCCCACCC AACTCGACCA ACCGGTTTCT 88255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCTTCTC AAATCGCTGA CATCATCAAT CTCCCCACCC AACTCGACCA ACCGGTTTCT 180 GTTGTCGCTG CTCCCGGCGT CTCCGATACT CACTTCAGGC AAATCCCTCA ACTTTTTATT 88195 |||||||||| |||||||||| |||||||||| |||||||| GTTGTCGCTG CTCCCGGCGT CTCCGATACT CACTTCAG.. .......... .......... 218 TCATTTGCGA TTCTATTTTT AGCTATCAAT TTACCCAATT CTTACTTAAT AGGGCATTTG 88135 .......... .......... .......... .......... .......... .......... 218 TTGTGTGGGT TTTATAAGTT TTTCATGATT TTTTAGAAAA AAAAAAGAAG CAGCCTTTTC 88075 .......... .......... .......... .......... .......... .......... 218 TATGATAAAG ATTAAGCAAT TTTCTTGGCA TGGATCCATT TGGATATACC TCAACATGTT 88015 .......... .......... .......... .......... .......... .......... 218 ATTCTTTGTT TTCTTTTACT TATTCGGGTT CTACTTTCAT CTGTCAATTT AAGTAATTCA 87955 .......... .......... .......... .......... .......... .......... 218 CACTTGATTC TTGTTATGTC CTTTTTTTCT TTTTGGGGTT CAAGTTTTAG CTTTCAGTTA 87895 .......... .......... .......... .......... .......... .......... 218 CGTAATTCAC TAGTATGCCA TTTGAGGTGA GGTTGTAGAA GTAAAGATTT TTAGTTATGT 87835 .......... .......... .......... .......... .......... .......... 218 TAAAGATTAA ACATTCTCTT GGGATGGCTT TGGATTATGT GGGCTGTTTG GATGCCATTT 87775 .......... .......... .......... .......... .......... .......... 218 GAGGTGAGGA TTGTGCATGA TTTTCAGAAA AGGAAGCATT TTTATGTTAA AGGATGGTTT 87715 .......... .......... .......... .......... .......... .......... 218 GAGTGAATTG TCTGTTTTCT TGTAGGAATG CTATTGAATC CTCATTGTTC AAACAGTGGT 87655 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GAATG CTATTGAATC CTCATTGTTC AAACAGTGGT 253 TAAAGAACAT ACAAACTGAA ACAGGACTGC TGGCTAATGG AGCGCTGTCT TTAAAACAAG 87595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGAACAT ACAAACTGAA ACAGGACTGC TGGCTAATGG AGCGCTGTCT TTAAAACAAG 313 TTCTTATCCA GGTTTCTATC TCAAGCTGTT CTGCTAAACT ATGAAGATAG TAACCTTTAC 87535 |||||||||| | TTCTTATCCA G......... .......... .......... .......... .......... 324 ATGGTCAGTA GTTACAATGA AATATATTGT TGGCTAATGG GACCATTAGA ACACAAATTG 87475 .......... .......... .......... .......... .......... .......... 324 AGTTGCTTGA ACCCTTCTAA ATTTTTTCCA CATTGGACAA TTGGAGGAAA ATGGTCTGTC 87415 .......... .......... .......... .......... .......... .......... 324 TTCTGATCAT AACTGATGCT GAGGCTCTTA ATTATATCTT TATTTAGTAT GTTTTGTCCT 87355 .......... .......... .......... .......... .......... .......... 324 AACATTTATC AAAAGAATGG ATATCTAGGT TGATTGTGCA CTTTATGCTC CTTAAAGATT 87295 .......... .......... .......... .......... .......... .......... 324 CCTATGCTTC CCTAACATAG TTGTCAGTCG TGCTCCCTCC TAAAGAGGAT AAAAAGGAAG 87235 .......... .......... .......... .......... .......... .......... 324 TCTTCTTGAT GTACGTGTCT GAATTTTTGG AATGATGTTA ACTCGCACTA TCAGCGACCA 87175 .......... .......... .......... .......... .......... .......... 324 AGAGTCCAAG ACATAGTGAC TATCACAGGA TTTGAAACTG CTTTTGGTCC TGCTACCGCA 87115 .......... .......... .......... .......... .......... .......... 324 AACATTAAGT TTGCTTTACA GCTGACATTC CTTTTTATGT GTTGGAGCAG GGTGTAGATA 87055 |||||||||| .......... .......... .......... .......... .......... GGTGTAGATA 334 TGTTTGGAGA GCGTTTGGGG TTTCTAAAAT TCAAAGCAGA TATTATTGAT AAGGAAACGG 86995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTGGAGA GCGTTTGGGG TTTCTAAAAT TCAAAGCAGA TATTATTGAT AAGGAAACGG 394 GTCAAAAGGT ATCTGATTAG AATCTCTCCA TCCCATTGGA TATGTAATTC ATTCAGCCGG 86935 |||||||| GTCAAAAG.. .......... .......... .......... .......... .......... 402 ACTATGAATA GCTTCTCTTA AAGCTGTGTC CTCAATTTAT TTTGCTTTGG TTTTTTTTCC 86875 .......... .......... .......... .......... .......... .......... 402 TTGTACCTTA GAGCATTGAA CAATACAGTA CTCGTGACAT AGCTCGACAA TATTAGCATG 86815 .......... .......... .......... .......... .......... .......... 402 ACAATGATGT ATTACTTCCA TTTTCCTTTT TCCTAGCTTA TCCTTGGTTG CAACAAGGGA 86755 .......... .......... .......... .......... .......... .......... 402 AACTTCTTTC CTGTCACTAT CACCTCTTTT GTGTCTAGGT TCCTGGTATT GTCTTCGCAC 86695 || |||||||||| |||||||||| .......... .......... .......... ........GT TCCTGGTATT GTCTTCGCAC 424 GGGGTCCAGC TGTTGCAGTT CTAATCCTTT TGGATTATGA GGGTGAGACA TATGCTGTGC 86635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTCCAGC TGTTGCAGTT CTAATCCTTT TGGATTATGA GGGTGAGACA TATGCTGTGC 484 TTACGGAACA GGTAGGTCTT CCAACTGTCA ACTCCTCCAT TTTTATAACG TCGAAAAATA 86575 |||||||||| | TTACGGAACA G......... .......... .......... .......... .......... 495 TCTCACAGTA CAGATAATAT GAGGAAATTT ATGAAAGTTT TCTGTCCCTT TTACTGTTTA 86515 .......... .......... .......... .......... .......... .......... 495 AACTCTAAAA TACATTCAAC CTGTTTGGAA GGTTAGGGTC CCAGTTGGGA GGCTAATTTT 86455 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GTTAGGGTC CCAGTTGGGA GGCTAATTTT 524 GGAATTGCCA GCAGGA 86439 |||||||||| |||||| GGAATTGCCA GCAGGA 540 hqPGS_C08HBa0165B06.1-_SGN-E550949+ (88434 88217,87689 87584,87064 86987,86716 86624,86483 86439) ******************************************************************************** EST sequence 140 +strand 517 n (File: SGN-E550985+) 1 GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG GGTGTAGATA TGTTTGGAGA 61 GCGTTTGGGG TTTCTAAAAT TCAAAGCAGA TATTATTGAT AAGGAAACGG GTCAAAAGGT 121 ATCTGATTAG AATCTCTCCA TCCCATTGGA TATGTAATTC ATTCAGCCGG ACTATGAATA 181 GCTTCTCTTA AAGCTGTGTC CTCAATTTAT TTTGCTTTGG TTTTTTTTCC TTGTACCTTA 241 GAGCATTGAA CAATACAGTA CTCGTGACAT AGCTCGACAA TATTAGCATG ACAATGATGT 301 ATTACTTCCA TTTTCCTTTT TCCTAGCTTA TCCTTGGTTG CAACAAGGGA AACTTCTTTC 361 CTGTCACTAT CACCTCTTTT GTGTCTAGGT TCCTGGTATT GTCTTCGCAC GGGGTCCAGC 421 TGTTGCAGTT CTAATCCTTT TGGATTATGA GGGTGAGACA TATGCTGTGC TTACGGAACA 481 GGTTAAGGTC CCAGTTGGGA AGCTAATTTT GGAATTG Predicted gene structure (within gDNA segment 88223 to 85672): Exon 1 87623 87584 ( 40 n); cDNA 1 40 ( 40 n); score: 1.000 Intron 1 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 87064 86624 ( 441 n); cDNA 41 481 ( 441 n); score: 1.000 Intron 2 86623 86484 ( 140 n); Pd: 0.993 (s: 1.00), Pa: 0.990 (s: 0) Exon 3 86483 86448 ( 36 n); cDNA 482 517 ( 36 n); score: 0.944 MATCH C08HBa0165B06.1- SGN-E550985+ 1.000 517 1.000 C PGS_C08HBa0165B06.1-_SGN-E550985+ (87623 87584,87064 86624,86483 86448) Alignment (genomic DNA sequence = upper lines): GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG GTTTCTATCT CAAGCTGTTC 87564 |||||||||| |||||||||| |||||||||| |||||||||| GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG .......... .......... 40 TGCTAAACTA TGAAGATAGT AACCTTTACA TGGTCAGTAG TTACAATGAA ATATATTGTT 87504 .......... .......... .......... .......... .......... .......... 40 GGCTAATGGG ACCATTAGAA CACAAATTGA GTTGCTTGAA CCCTTCTAAA TTTTTTCCAC 87444 .......... .......... .......... .......... .......... .......... 40 ATTGGACAAT TGGAGGAAAA TGGTCTGTCT TCTGATCATA ACTGATGCTG AGGCTCTTAA 87384 .......... .......... .......... .......... .......... .......... 40 TTATATCTTT ATTTAGTATG TTTTGTCCTA ACATTTATCA AAAGAATGGA TATCTAGGTT 87324 .......... .......... .......... .......... .......... .......... 40 GATTGTGCAC TTTATGCTCC TTAAAGATTC CTATGCTTCC CTAACATAGT TGTCAGTCGT 87264 .......... .......... .......... .......... .......... .......... 40 GCTCCCTCCT AAAGAGGATA AAAAGGAAGT CTTCTTGATG TACGTGTCTG AATTTTTGGA 87204 .......... .......... .......... .......... .......... .......... 40 ATGATGTTAA CTCGCACTAT CAGCGACCAA GAGTCCAAGA CATAGTGACT ATCACAGGAT 87144 .......... .......... .......... .......... .......... .......... 40 TTGAAACTGC TTTTGGTCCT GCTACCGCAA ACATTAAGTT TGCTTTACAG CTGACATTCC 87084 .......... .......... .......... .......... .......... .......... 40 TTTTTATGTG TTGGAGCAGG GTGTAGATAT GTTTGGAGAG CGTTTGGGGT TTCTAAAATT 87024 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........G GTGTAGATAT GTTTGGAGAG CGTTTGGGGT TTCTAAAATT 81 CAAAGCAGAT ATTATTGATA AGGAAACGGG TCAAAAGGTA TCTGATTAGA ATCTCTCCAT 86964 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGCAGAT ATTATTGATA AGGAAACGGG TCAAAAGGTA TCTGATTAGA ATCTCTCCAT 141 CCCATTGGAT ATGTAATTCA TTCAGCCGGA CTATGAATAG CTTCTCTTAA AGCTGTGTCC 86904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATTGGAT ATGTAATTCA TTCAGCCGGA CTATGAATAG CTTCTCTTAA AGCTGTGTCC 201 TCAATTTATT TTGCTTTGGT TTTTTTTCCT TGTACCTTAG AGCATTGAAC AATACAGTAC 86844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTTATT TTGCTTTGGT TTTTTTTCCT TGTACCTTAG AGCATTGAAC AATACAGTAC 261 TCGTGACATA GCTCGACAAT ATTAGCATGA CAATGATGTA TTACTTCCAT TTTCCTTTTT 86784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTGACATA GCTCGACAAT ATTAGCATGA CAATGATGTA TTACTTCCAT TTTCCTTTTT 321 CCTAGCTTAT CCTTGGTTGC AACAAGGGAA ACTTCTTTCC TGTCACTATC ACCTCTTTTG 86724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGCTTAT CCTTGGTTGC AACAAGGGAA ACTTCTTTCC TGTCACTATC ACCTCTTTTG 381 TGTCTAGGTT CCTGGTATTG TCTTCGCACG GGGTCCAGCT GTTGCAGTTC TAATCCTTTT 86664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCTAGGTT CCTGGTATTG TCTTCGCACG GGGTCCAGCT GTTGCAGTTC TAATCCTTTT 441 GGATTATGAG GGTGAGACAT ATGCTGTGCT TACGGAACAG GTAGGTCTTC CAACTGTCAA 86604 |||||||||| |||||||||| |||||||||| |||||||||| GGATTATGAG GGTGAGACAT ATGCTGTGCT TACGGAACAG .......... .......... 481 CTCCTCCATT TTTATAACGT CGAAAAATAT CTCACAGTAC AGATAATATG AGGAAATTTA 86544 .......... .......... .......... .......... .......... .......... 481 TGAAAGTTTT CTGTCCCTTT TACTGTTTAA ACTCTAAAAT ACATTCAACC TGTTTGGAAG 86484 .......... .......... .......... .......... .......... .......... 481 GTTAGGGTCC CAGTTGGGAG GCTAATTTTG GAATTG 86448 |||| ||||| ||||||||| |||||||||| |||||| GTTAAGGTCC CAGTTGGGAA GCTAATTTTG GAATTG 517 hqPGS_C08HBa0165B06.1-_SGN-E550985+ (87623 87584,87064 86624,86483 86448) ******************************************************************************** EST sequence 229 +strand 486 n (File: SGN-E254525+) 1 TGCCACGTTT TGGACTTCCA TTCTTGAAAC CTCTCTATGA ATTCCCCTTT TCCTCTTCTT 61 CTTCAAACCT TTGGCCCAGA AATTGTTCTG GAAGCTTCTC TGTAAAAATG TCAACAACCC 121 CACCTTCTCA AATCGCTGAC ATCATCAATC TCCCCACCCA ACTCGACCAA CCGGTTTCTG 181 TTGTCGCTGC TCCCGGCGTC TCCGATACTC ACTTCAGGAA TGCTATTGAA TCCTCATTGT 241 TCAAACAGTG GTTAAAGAAC ATACAAACTG AAACAGGACT GCTGGCTAAT GGAGCGCTGT 301 CTTTAAAACA AGTTCTTATC CAGGGTGTAG ATATGTTTGG AGAGCGTTTG GGGTTTCTAA 361 AATTCAAAGC AGATATTATT GATAAGGAAA CGGGTCAAAA GGTTCCTGGT ATTGTCTTCG 421 CACGGGGTCC AGCTGTTGCA GTTCTAATGC TTATGGATTA TGAGGGTGAG ACATATGCTG 481 TGCTTA Predicted gene structure (within gDNA segment 89033 to 86022): Exon 1 88433 88217 ( 217 n); cDNA 1 217 ( 217 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 218 323 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 324 401 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 0.98) Exon 4 86716 86632 ( 85 n); cDNA 402 486 ( 85 n); score: 0.976 MATCH C08HBa0165B06.1- SGN-E254525+ 0.996 486 1.000 C PGS_C08HBa0165B06.1-_SGN-E254525+ (88433 88217,87689 87584,87064 86987,86716 86632) Alignment (genomic DNA sequence = upper lines): TGCCACGTTT TGGACTTCCA TTCTTGAAAC CTCTCTATGA ATTCCCCTTT TCCTCTTCTT 88374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCACGTTT TGGACTTCCA TTCTTGAAAC CTCTCTATGA ATTCCCCTTT TCCTCTTCTT 60 CTTCAAACCT TTGGCCCAGA AATTGTTCTG GAAGCTTCTC TGTAAAAATG TCAACAACCC 88314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCAAACCT TTGGCCCAGA AATTGTTCTG GAAGCTTCTC TGTAAAAATG TCAACAACCC 120 CACCTTCTCA AATCGCTGAC ATCATCAATC TCCCCACCCA ACTCGACCAA CCGGTTTCTG 88254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCTTCTCA AATCGCTGAC ATCATCAATC TCCCCACCCA ACTCGACCAA CCGGTTTCTG 180 TTGTCGCTGC TCCCGGCGTC TCCGATACTC ACTTCAGGCA AATCCCTCAA CTTTTTATTT 88194 |||||||||| |||||||||| |||||||||| ||||||| TTGTCGCTGC TCCCGGCGTC TCCGATACTC ACTTCAG... .......... .......... 217 CATTTGCGAT TCTATTTTTA GCTATCAATT TACCCAATTC TTACTTAATA GGGCATTTGT 88134 .......... .......... .......... .......... .......... .......... 217 TGTGTGGGTT TTATAAGTTT TTCATGATTT TTTAGAAAAA AAAAAGAAGC AGCCTTTTCT 88074 .......... .......... .......... .......... .......... .......... 217 ATGATAAAGA TTAAGCAATT TTCTTGGCAT GGATCCATTT GGATATACCT CAACATGTTA 88014 .......... .......... .......... .......... .......... .......... 217 TTCTTTGTTT TCTTTTACTT ATTCGGGTTC TACTTTCATC TGTCAATTTA AGTAATTCAC 87954 .......... .......... .......... .......... .......... .......... 217 ACTTGATTCT TGTTATGTCC TTTTTTTCTT TTTGGGGTTC AAGTTTTAGC TTTCAGTTAC 87894 .......... .......... .......... .......... .......... .......... 217 GTAATTCACT AGTATGCCAT TTGAGGTGAG GTTGTAGAAG TAAAGATTTT TAGTTATGTT 87834 .......... .......... .......... .......... .......... .......... 217 AAAGATTAAA CATTCTCTTG GGATGGCTTT GGATTATGTG GGCTGTTTGG ATGCCATTTG 87774 .......... .......... .......... .......... .......... .......... 217 AGGTGAGGAT TGTGCATGAT TTTCAGAAAA GGAAGCATTT TTATGTTAAA GGATGGTTTG 87714 .......... .......... .......... .......... .......... .......... 217 AGTGAATTGT CTGTTTTCTT GTAGGAATGC TATTGAATCC TCATTGTTCA AACAGTGGTT 87654 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....GAATGC TATTGAATCC TCATTGTTCA AACAGTGGTT 253 AAAGAACATA CAAACTGAAA CAGGACTGCT GGCTAATGGA GCGCTGTCTT TAAAACAAGT 87594 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAACATA CAAACTGAAA CAGGACTGCT GGCTAATGGA GCGCTGTCTT TAAAACAAGT 313 TCTTATCCAG GTTTCTATCT CAAGCTGTTC TGCTAAACTA TGAAGATAGT AACCTTTACA 87534 |||||||||| TCTTATCCAG .......... .......... .......... .......... .......... 323 TGGTCAGTAG TTACAATGAA ATATATTGTT GGCTAATGGG ACCATTAGAA CACAAATTGA 87474 .......... .......... .......... .......... .......... .......... 323 GTTGCTTGAA CCCTTCTAAA TTTTTTCCAC ATTGGACAAT TGGAGGAAAA TGGTCTGTCT 87414 .......... .......... .......... .......... .......... .......... 323 TCTGATCATA ACTGATGCTG AGGCTCTTAA TTATATCTTT ATTTAGTATG TTTTGTCCTA 87354 .......... .......... .......... .......... .......... .......... 323 ACATTTATCA AAAGAATGGA TATCTAGGTT GATTGTGCAC TTTATGCTCC TTAAAGATTC 87294 .......... .......... .......... .......... .......... .......... 323 CTATGCTTCC CTAACATAGT TGTCAGTCGT GCTCCCTCCT AAAGAGGATA AAAAGGAAGT 87234 .......... .......... .......... .......... .......... .......... 323 CTTCTTGATG TACGTGTCTG AATTTTTGGA ATGATGTTAA CTCGCACTAT CAGCGACCAA 87174 .......... .......... .......... .......... .......... .......... 323 GAGTCCAAGA CATAGTGACT ATCACAGGAT TTGAAACTGC TTTTGGTCCT GCTACCGCAA 87114 .......... .......... .......... .......... .......... .......... 323 ACATTAAGTT TGCTTTACAG CTGACATTCC TTTTTATGTG TTGGAGCAGG GTGTAGATAT 87054 | |||||||||| .......... .......... .......... .......... .........G GTGTAGATAT 334 GTTTGGAGAG CGTTTGGGGT TTCTAAAATT CAAAGCAGAT ATTATTGATA AGGAAACGGG 86994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGGAGAG CGTTTGGGGT TTCTAAAATT CAAAGCAGAT ATTATTGATA AGGAAACGGG 394 TCAAAAGGTA TCTGATTAGA ATCTCTCCAT CCCATTGGAT ATGTAATTCA TTCAGCCGGA 86934 ||||||| TCAAAAG... .......... .......... .......... .......... .......... 401 CTATGAATAG CTTCTCTTAA AGCTGTGTCC TCAATTTATT TTGCTTTGGT TTTTTTTCCT 86874 .......... .......... .......... .......... .......... .......... 401 TGTACCTTAG AGCATTGAAC AATACAGTAC TCGTGACATA GCTCGACAAT ATTAGCATGA 86814 .......... .......... .......... .......... .......... .......... 401 CAATGATGTA TTACTTCCAT TTTCCTTTTT CCTAGCTTAT CCTTGGTTGC AACAAGGGAA 86754 .......... .......... .......... .......... .......... .......... 401 ACTTCTTTCC TGTCACTATC ACCTCTTTTG TGTCTAGGTT CCTGGTATTG TCTTCGCACG 86694 ||| |||||||||| |||||||||| .......... .......... .......... .......GTT CCTGGTATTG TCTTCGCACG 424 GGGTCCAGCT GTTGCAGTTC TAATCCTTTT GGATTATGAG GGTGAGACAT ATGCTGTGCT 86634 |||||||||| |||||||||| |||| ||| | |||||||||| |||||||||| |||||||||| GGGTCCAGCT GTTGCAGTTC TAATGCTTAT GGATTATGAG GGTGAGACAT ATGCTGTGCT 484 TA 86632 || TA 486 hqPGS_C08HBa0165B06.1-_SGN-E254525+ (88433 88217,87689 87584,87064 86987,86716 86632) ******************************************************************************** EST sequence 273 +strand 403 n (File: SGN-E256206+) 1 CGGGCTGCAG GCTTCTCTGT GAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC 61 ATCAATCTCC CCACCCAACT CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC 121 GATACTCACT TCAGGAATGC TATTGAATCC TCATTGTTCA AACAGTGGTT AAAGAACATA 181 CAAACTGAAA CAGGACTGCT GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAT 241 GGTGTAGATA TGTTTGGAGA GCGTTTGGGG TTTCTAAAAT TCAAAGCAGA TATTATTGAT 301 AAGGAAACGG GTCAAAAGGT TCCTGGTATT GTCTTCGCAC GGGGTCCAGC TGTTGCAGTT 361 CTAATCCTTT TGGATTATGA GGGTGAGACA TATGCTGTGC TTA Predicted gene structure (within gDNA segment 89139 to 86022): Exon 1 88346 88217 ( 130 n); cDNA 5 134 ( 130 n); score: 0.977 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 135 240 ( 106 n); score: 0.991 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 0.98), Pa: 0.997 (s: 1.00) Exon 3 87064 86987 ( 78 n); cDNA 241 318 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 86716 86632 ( 85 n); cDNA 319 403 ( 85 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E256206+ 0.990 399 0.990 C PGS_C08HBa0165B06.1-_SGN-E256206+ (88346 88217,87689 87584,87064 86987,86716 86632) Alignment (genomic DNA sequence = upper lines): CTGGAAGCTT CTCTGTAAAA ATGTCAACAA CCCCACCTTC TCAAATCGCT GACATCATCA 88287 ||| | |||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAGGCTT CTCTGTGAAA ATGTCAACAA CCCCACCTTC TCAAATCGCT GACATCATCA 64 ATCTCCCCAC CCAACTCGAC CAACCGGTTT CTGTTGTCGC TGCTCCCGGC GTCTCCGATA 88227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTCCCCAC CCAACTCGAC CAACCGGTTT CTGTTGTCGC TGCTCCCGGC GTCTCCGATA 124 CTCACTTCAG GCAAATCCCT CAACTTTTTA TTTCATTTGC GATTCTATTT TTAGCTATCA 88167 |||||||||| CTCACTTCAG .......... .......... .......... .......... .......... 134 ATTTACCCAA TTCTTACTTA ATAGGGCATT TGTTGTGTGG GTTTTATAAG TTTTTCATGA 88107 .......... .......... .......... .......... .......... .......... 134 TTTTTTAGAA AAAAAAAAGA AGCAGCCTTT TCTATGATAA AGATTAAGCA ATTTTCTTGG 88047 .......... .......... .......... .......... .......... .......... 134 CATGGATCCA TTTGGATATA CCTCAACATG TTATTCTTTG TTTTCTTTTA CTTATTCGGG 87987 .......... .......... .......... .......... .......... .......... 134 TTCTACTTTC ATCTGTCAAT TTAAGTAATT CACACTTGAT TCTTGTTATG TCCTTTTTTT 87927 .......... .......... .......... .......... .......... .......... 134 CTTTTTGGGG TTCAAGTTTT AGCTTTCAGT TACGTAATTC ACTAGTATGC CATTTGAGGT 87867 .......... .......... .......... .......... .......... .......... 134 GAGGTTGTAG AAGTAAAGAT TTTTAGTTAT GTTAAAGATT AAACATTCTC TTGGGATGGC 87807 .......... .......... .......... .......... .......... .......... 134 TTTGGATTAT GTGGGCTGTT TGGATGCCAT TTGAGGTGAG GATTGTGCAT GATTTTCAGA 87747 .......... .......... .......... .......... .......... .......... 134 AAAGGAAGCA TTTTTATGTT AAAGGATGGT TTGAGTGAAT TGTCTGTTTT CTTGTAGGAA 87687 ||| .......... .......... .......... .......... .......... .......GAA 137 TGCTATTGAA TCCTCATTGT TCAAACAGTG GTTAAAGAAC ATACAAACTG AAACAGGACT 87627 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTATTGAA TCCTCATTGT TCAAACAGTG GTTAAAGAAC ATACAAACTG AAACAGGACT 197 GCTGGCTAAT GGAGCGCTGT CTTTAAAACA AGTTCTTATC CAGGTTTCTA TCTCAAGCTG 87567 |||||||||| |||||||||| |||||||||| |||||||||| || GCTGGCTAAT GGAGCGCTGT CTTTAAAACA AGTTCTTATC CAT....... .......... 240 TTCTGCTAAA CTATGAAGAT AGTAACCTTT ACATGGTCAG TAGTTACAAT GAAATATATT 87507 .......... .......... .......... .......... .......... .......... 240 GTTGGCTAAT GGGACCATTA GAACACAAAT TGAGTTGCTT GAACCCTTCT AAATTTTTTC 87447 .......... .......... .......... .......... .......... .......... 240 CACATTGGAC AATTGGAGGA AAATGGTCTG TCTTCTGATC ATAACTGATG CTGAGGCTCT 87387 .......... .......... .......... .......... .......... .......... 240 TAATTATATC TTTATTTAGT ATGTTTTGTC CTAACATTTA TCAAAAGAAT GGATATCTAG 87327 .......... .......... .......... .......... .......... .......... 240 GTTGATTGTG CACTTTATGC TCCTTAAAGA TTCCTATGCT TCCCTAACAT AGTTGTCAGT 87267 .......... .......... .......... .......... .......... .......... 240 CGTGCTCCCT CCTAAAGAGG ATAAAAAGGA AGTCTTCTTG ATGTACGTGT CTGAATTTTT 87207 .......... .......... .......... .......... .......... .......... 240 GGAATGATGT TAACTCGCAC TATCAGCGAC CAAGAGTCCA AGACATAGTG ACTATCACAG 87147 .......... .......... .......... .......... .......... .......... 240 GATTTGAAAC TGCTTTTGGT CCTGCTACCG CAAACATTAA GTTTGCTTTA CAGCTGACAT 87087 .......... .......... .......... .......... .......... .......... 240 TCCTTTTTAT GTGTTGGAGC AGGGTGTAGA TATGTTTGGA GAGCGTTTGG GGTTTCTAAA 87027 |||||||| |||||||||| |||||||||| |||||||||| .......... .......... ..GGTGTAGA TATGTTTGGA GAGCGTTTGG GGTTTCTAAA 278 ATTCAAAGCA GATATTATTG ATAAGGAAAC GGGTCAAAAG GTATCTGATT AGAATCTCTC 86967 |||||||||| |||||||||| |||||||||| |||||||||| ATTCAAAGCA GATATTATTG ATAAGGAAAC GGGTCAAAAG .......... .......... 318 CATCCCATTG GATATGTAAT TCATTCAGCC GGACTATGAA TAGCTTCTCT TAAAGCTGTG 86907 .......... .......... .......... .......... .......... .......... 318 TCCTCAATTT ATTTTGCTTT GGTTTTTTTT CCTTGTACCT TAGAGCATTG AACAATACAG 86847 .......... .......... .......... .......... .......... .......... 318 TACTCGTGAC ATAGCTCGAC AATATTAGCA TGACAATGAT GTATTACTTC CATTTTCCTT 86787 .......... .......... .......... .......... .......... .......... 318 TTTCCTAGCT TATCCTTGGT TGCAACAAGG GAAACTTCTT TCCTGTCACT ATCACCTCTT 86727 .......... .......... .......... .......... .......... .......... 318 TTGTGTCTAG GTTCCTGGTA TTGTCTTCGC ACGGGGTCCA GCTGTTGCAG TTCTAATCCT 86667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... GTTCCTGGTA TTGTCTTCGC ACGGGGTCCA GCTGTTGCAG TTCTAATCCT 368 TTTGGATTAT GAGGGTGAGA CATATGCTGT GCTTA 86632 |||||||||| |||||||||| |||||||||| ||||| TTTGGATTAT GAGGGTGAGA CATATGCTGT GCTTA 403 hqPGS_C08HBa0165B06.1-_SGN-E256206+ (88346 88217,87689 87584,87064 86987,86716 86632) ******************************************************************************** EST sequence 295 +strand 474 n (File: SGN-E256772+) 1 GGGCTAATGG AGCGCTGTCT TTAAAACAAG TTCTTATCCA GGGTGTAGAT ATGTTTGGAG 61 AGCGTTTGGG GTTTCTAAAA TTCAAAGCAG ATATTATTGA TAAGGAAACG GGTCAAAAGG 121 TATCTGATTA GAATCTCTCC ATCCCATTGG ATATGTAATT CATTCAGCCG GACTATGAAT 181 AACTTCTCTT AAAACTGGGT CCTCAATTTA TTTTGCTTTG GGTTTTTTTC CTTGTACCTT 241 AGAGCATTGA ACAATACAGT ACTCGTGACA TAGCTCGACA ATATTAGCAT GACAATGATG 301 TATTACTTCC ATTTTCCTTT TTCCTAACTT ATCCTTGGGT GCAACAAGGG AAACTTCTTT 361 CCTGTCACTA TCACCTCTTT TGTGTCTAGG TTCCTGGTAT TGTCTTCGCA CGGGGTCCAA 421 CTGTTGCAGT TCTAATCCTT TTGGATTATG AAGGTGAGAC ATATGCTGTG CTTA Predicted gene structure (within gDNA segment 88233 to 86022): Exon 1 87623 87584 ( 40 n); cDNA 2 41 ( 40 n); score: 1.000 Intron 1 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 87064 86632 ( 433 n); cDNA 42 474 ( 433 n); score: 0.982 MATCH C08HBa0165B06.1- SGN-E256772+ 0.982 473 0.998 C PGS_C08HBa0165B06.1-_SGN-E256772+ (87623 87584,87064 86632) Alignment (genomic DNA sequence = upper lines): GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG GTTTCTATCT CAAGCTGTTC 87564 |||||||||| |||||||||| |||||||||| |||||||||| GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG .......... .......... 41 TGCTAAACTA TGAAGATAGT AACCTTTACA TGGTCAGTAG TTACAATGAA ATATATTGTT 87504 .......... .......... .......... .......... .......... .......... 41 GGCTAATGGG ACCATTAGAA CACAAATTGA GTTGCTTGAA CCCTTCTAAA TTTTTTCCAC 87444 .......... .......... .......... .......... .......... .......... 41 ATTGGACAAT TGGAGGAAAA TGGTCTGTCT TCTGATCATA ACTGATGCTG AGGCTCTTAA 87384 .......... .......... .......... .......... .......... .......... 41 TTATATCTTT ATTTAGTATG TTTTGTCCTA ACATTTATCA AAAGAATGGA TATCTAGGTT 87324 .......... .......... .......... .......... .......... .......... 41 GATTGTGCAC TTTATGCTCC TTAAAGATTC CTATGCTTCC CTAACATAGT TGTCAGTCGT 87264 .......... .......... .......... .......... .......... .......... 41 GCTCCCTCCT AAAGAGGATA AAAAGGAAGT CTTCTTGATG TACGTGTCTG AATTTTTGGA 87204 .......... .......... .......... .......... .......... .......... 41 ATGATGTTAA CTCGCACTAT CAGCGACCAA GAGTCCAAGA CATAGTGACT ATCACAGGAT 87144 .......... .......... .......... .......... .......... .......... 41 TTGAAACTGC TTTTGGTCCT GCTACCGCAA ACATTAAGTT TGCTTTACAG CTGACATTCC 87084 .......... .......... .......... .......... .......... .......... 41 TTTTTATGTG TTGGAGCAGG GTGTAGATAT GTTTGGAGAG CGTTTGGGGT TTCTAAAATT 87024 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........G GTGTAGATAT GTTTGGAGAG CGTTTGGGGT TTCTAAAATT 82 CAAAGCAGAT ATTATTGATA AGGAAACGGG TCAAAAGGTA TCTGATTAGA ATCTCTCCAT 86964 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGCAGAT ATTATTGATA AGGAAACGGG TCAAAAGGTA TCTGATTAGA ATCTCTCCAT 142 CCCATTGGAT ATGTAATTCA TTCAGCCGGA CTATGAATAG CTTCTCTTAA AGCTGTGTCC 86904 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| | ||| |||| CCCATTGGAT ATGTAATTCA TTCAGCCGGA CTATGAATAA CTTCTCTTAA AACTGGGTCC 202 TCAATTTATT TTGCTTTGGT TTTTTTTCCT TGTACCTTAG AGCATTGAAC AATACAGTAC 86844 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTTATT TTGCTTTGGG TTTTTTTCCT TGTACCTTAG AGCATTGAAC AATACAGTAC 262 TCGTGACATA GCTCGACAAT ATTAGCATGA CAATGATGTA TTACTTCCAT TTTCCTTTTT 86784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTGACATA GCTCGACAAT ATTAGCATGA CAATGATGTA TTACTTCCAT TTTCCTTTTT 322 CCTAGCTTAT CCTTGGTTGC AACAAGGGAA ACTTCTTTCC TGTCACTATC ACCTCTTTTG 86724 |||| ||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAACTTAT CCTTGGGTGC AACAAGGGAA ACTTCTTTCC TGTCACTATC ACCTCTTTTG 382 TGTCTAGGTT CCTGGTATTG TCTTCGCACG GGGTCCAGCT GTTGCAGTTC TAATCCTTTT 86664 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TGTCTAGGTT CCTGGTATTG TCTTCGCACG GGGTCCAACT GTTGCAGTTC TAATCCTTTT 442 GGATTATGAG GGTGAGACAT ATGCTGTGCT TA 86632 ||||||||| |||||||||| |||||||||| || GGATTATGAA GGTGAGACAT ATGCTGTGCT TA 474 hqPGS_C08HBa0165B06.1-_SGN-E256772+ (87623 87584,87064 86632) ******************************************************************************** EST sequence 410 +strand 430 n (File: SGN-E209368+) 1 AGTGCCTCGT TTTGGACTTT CATTCTTGAG ACCCTTCTAT GAATTCCGCT TTTGCTCTTC 61 TTCTGCAAAC CTTTGGCCCA GAAATTGGTC TGGCAGCTCC TCTGTAAAAA TGTCAACAAC 121 CCCACCTTCT CAAATCGCTG ACATCATCAA TCTCCCCACC CAACTCGACC AACCGGTTTC 181 TGTTGTCGCT GCTCCCGGCG TCTCCGATAC TCACTTCAGG AATGCTATTG AATCCTCATT 241 GTTCAAACAG TGGTTAAAGA ACATACAAAC TGAAACAGGA CTGCTGGCTA ATGGAGCGCT 301 GTCTTTAAAA CAAGTTCTTA TCCAGCGTGT AGATATGTTT GGAGAGCGTT TGGGGTTTCT 361 AAAATTCAAA GCAGATATTA TTGATAAGGA AACGGGTCAA AAGGTTCCTG GTATTGTCTT 421 CGCACGGGGT Predicted gene structure (within gDNA segment 89620 to 86125): Exon 1 88435 88217 ( 219 n); cDNA 1 219 ( 219 n); score: 0.950 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 220 325 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 0.98) Exon 3 87064 86987 ( 78 n); cDNA 326 403 ( 78 n); score: 0.987 Intron 3 86986 86717 ( 270 n); Pd: 0.802 (s: 1.00), Pa: 0.990 (s: 0) Exon 4 86716 86690 ( 27 n); cDNA 404 430 ( 27 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E209368+ 0.970 430 1.000 C PGS_C08HBa0165B06.1-_SGN-E209368+ (88435 88217,87689 87584,87064 86987,86716 86690) Alignment (genomic DNA sequence = upper lines): AGTGCCACGT TTTGGACTTC CATTCTTGAA ACCTCTCTAT GAATTCCCCT TTTCCTCTTC 88376 |||||| ||| ||||||||| ||||||||| ||| ||||| ||||||| || ||| |||||| AGTGCCTCGT TTTGGACTTT CATTCTTGAG ACCCTTCTAT GAATTCCGCT TTTGCTCTTC 60 TTCTTCAAAC CTTTGGCCCA GAAATTGTTC TGGAAGCTTC TCTGTAAAAA TGTCAACAAC 88316 |||| ||||| |||||||||| ||||||| || ||| |||| | |||||||||| |||||||||| TTCTGCAAAC CTTTGGCCCA GAAATTGGTC TGGCAGCTCC TCTGTAAAAA TGTCAACAAC 120 CCCACCTTCT CAAATCGCTG ACATCATCAA TCTCCCCACC CAACTCGACC AACCGGTTTC 88256 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCACCTTCT CAAATCGCTG ACATCATCAA TCTCCCCACC CAACTCGACC AACCGGTTTC 180 TGTTGTCGCT GCTCCCGGCG TCTCCGATAC TCACTTCAGG CAAATCCCTC AACTTTTTAT 88196 |||||||||| |||||||||| |||||||||| ||||||||| TGTTGTCGCT GCTCCCGGCG TCTCCGATAC TCACTTCAG. .......... .......... 219 TTCATTTGCG ATTCTATTTT TAGCTATCAA TTTACCCAAT TCTTACTTAA TAGGGCATTT 88136 .......... .......... .......... .......... .......... .......... 219 GTTGTGTGGG TTTTATAAGT TTTTCATGAT TTTTTAGAAA AAAAAAAGAA GCAGCCTTTT 88076 .......... .......... .......... .......... .......... .......... 219 CTATGATAAA GATTAAGCAA TTTTCTTGGC ATGGATCCAT TTGGATATAC CTCAACATGT 88016 .......... .......... .......... .......... .......... .......... 219 TATTCTTTGT TTTCTTTTAC TTATTCGGGT TCTACTTTCA TCTGTCAATT TAAGTAATTC 87956 .......... .......... .......... .......... .......... .......... 219 ACACTTGATT CTTGTTATGT CCTTTTTTTC TTTTTGGGGT TCAAGTTTTA GCTTTCAGTT 87896 .......... .......... .......... .......... .......... .......... 219 ACGTAATTCA CTAGTATGCC ATTTGAGGTG AGGTTGTAGA AGTAAAGATT TTTAGTTATG 87836 .......... .......... .......... .......... .......... .......... 219 TTAAAGATTA AACATTCTCT TGGGATGGCT TTGGATTATG TGGGCTGTTT GGATGCCATT 87776 .......... .......... .......... .......... .......... .......... 219 TGAGGTGAGG ATTGTGCATG ATTTTCAGAA AAGGAAGCAT TTTTATGTTA AAGGATGGTT 87716 .......... .......... .......... .......... .......... .......... 219 TGAGTGAATT GTCTGTTTTC TTGTAGGAAT GCTATTGAAT CCTCATTGTT CAAACAGTGG 87656 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GAAT GCTATTGAAT CCTCATTGTT CAAACAGTGG 253 TTAAAGAACA TACAAACTGA AACAGGACTG CTGGCTAATG GAGCGCTGTC TTTAAAACAA 87596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGAACA TACAAACTGA AACAGGACTG CTGGCTAATG GAGCGCTGTC TTTAAAACAA 313 GTTCTTATCC AGGTTTCTAT CTCAAGCTGT TCTGCTAAAC TATGAAGATA GTAACCTTTA 87536 |||||||||| || GTTCTTATCC AG........ .......... .......... .......... .......... 325 CATGGTCAGT AGTTACAATG AAATATATTG TTGGCTAATG GGACCATTAG AACACAAATT 87476 .......... .......... .......... .......... .......... .......... 325 GAGTTGCTTG AACCCTTCTA AATTTTTTCC ACATTGGACA ATTGGAGGAA AATGGTCTGT 87416 .......... .......... .......... .......... .......... .......... 325 CTTCTGATCA TAACTGATGC TGAGGCTCTT AATTATATCT TTATTTAGTA TGTTTTGTCC 87356 .......... .......... .......... .......... .......... .......... 325 TAACATTTAT CAAAAGAATG GATATCTAGG TTGATTGTGC ACTTTATGCT CCTTAAAGAT 87296 .......... .......... .......... .......... .......... .......... 325 TCCTATGCTT CCCTAACATA GTTGTCAGTC GTGCTCCCTC CTAAAGAGGA TAAAAAGGAA 87236 .......... .......... .......... .......... .......... .......... 325 GTCTTCTTGA TGTACGTGTC TGAATTTTTG GAATGATGTT AACTCGCACT ATCAGCGACC 87176 .......... .......... .......... .......... .......... .......... 325 AAGAGTCCAA GACATAGTGA CTATCACAGG ATTTGAAACT GCTTTTGGTC CTGCTACCGC 87116 .......... .......... .......... .......... .......... .......... 325 AAACATTAAG TTTGCTTTAC AGCTGACATT CCTTTTTATG TGTTGGAGCA GGGTGTAGAT 87056 |||||||| .......... .......... .......... .......... .......... .CGTGTAGAT 334 ATGTTTGGAG AGCGTTTGGG GTTTCTAAAA TTCAAAGCAG ATATTATTGA TAAGGAAACG 86996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTTGGAG AGCGTTTGGG GTTTCTAAAA TTCAAAGCAG ATATTATTGA TAAGGAAACG 394 GGTCAAAAGG TATCTGATTA GAATCTCTCC ATCCCATTGG ATATGTAATT CATTCAGCCG 86936 ||||||||| GGTCAAAAG. .......... .......... .......... .......... .......... 403 GACTATGAAT AGCTTCTCTT AAAGCTGTGT CCTCAATTTA TTTTGCTTTG GTTTTTTTTC 86876 .......... .......... .......... .......... .......... .......... 403 CTTGTACCTT AGAGCATTGA ACAATACAGT ACTCGTGACA TAGCTCGACA ATATTAGCAT 86816 .......... .......... .......... .......... .......... .......... 403 GACAATGATG TATTACTTCC ATTTTCCTTT TTCCTAGCTT ATCCTTGGTT GCAACAAGGG 86756 .......... .......... .......... .......... .......... .......... 403 AAACTTCTTT CCTGTCACTA TCACCTCTTT TGTGTCTAGG TTCCTGGTAT TGTCTTCGCA 86696 | |||||||||| |||||||||| .......... .......... .......... .........G TTCCTGGTAT TGTCTTCGCA 424 CGGGGT 86690 |||||| CGGGGT 430 hqPGS_C08HBa0165B06.1-_SGN-E209368+ (88435 88217,87689 87584,87064 86987,86716 86690) ******************************************************************************** EST sequence 238 +strand 416 n (File: SGN-E297538+) 1 GAAAATGAGA GTAACAGTGC CACGTTTTGG ACTTCCATTC TTGAAACCTC TCTATGAATT 61 CCCCTTTTCC TCTTCTTCTT CAAACCTTTG GCCCAGAAAT TGTTCTGGAA GCTTCTCTGT 121 AAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC ATCAATCTCC CCACCCAACT 181 CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC GATACTCACT TCAGGAATGC 241 TATTGAATCC TCATTGTTCA AACAGTGGTT AAAGAACATA CAAACTGAAA CAGGACTGCT 301 GGCTAATGGA GCGCTGTCTT TAAAACAAGT TCTTATCCAG GGTGTAGATA TGTTTGGAGA 361 GCGTTTGGGG TTTCTAAAAT TCAAAGCAGA TATTATTGAT AAGGAAACGG GTCAAA Predicted gene structure (within gDNA segment 89050 to 86379): Exon 1 88450 88217 ( 234 n); cDNA 1 234 ( 234 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 (s: 1.00), Pa: 0.956 (s: 1.00) Exon 2 87689 87584 ( 106 n); cDNA 235 340 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 87064 86989 ( 76 n); cDNA 341 416 ( 76 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E297538+ 1.000 416 1.000 C PGS_C08HBa0165B06.1-_SGN-E297538+ (88450 88217,87689 87584,87064 86989) Alignment (genomic DNA sequence = upper lines): GAAAATGAGA GTAACAGTGC CACGTTTTGG ACTTCCATTC TTGAAACCTC TCTATGAATT 88391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAATGAGA GTAACAGTGC CACGTTTTGG ACTTCCATTC TTGAAACCTC TCTATGAATT 60 CCCCTTTTCC TCTTCTTCTT CAAACCTTTG GCCCAGAAAT TGTTCTGGAA GCTTCTCTGT 88331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTTTTCC TCTTCTTCTT CAAACCTTTG GCCCAGAAAT TGTTCTGGAA GCTTCTCTGT 120 AAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC ATCAATCTCC CCACCCAACT 88271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATGTCA ACAACCCCAC CTTCTCAAAT CGCTGACATC ATCAATCTCC CCACCCAACT 180 CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC GATACTCACT TCAGGCAAAT 88211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| CGACCAACCG GTTTCTGTTG TCGCTGCTCC CGGCGTCTCC GATACTCACT TCAG...... 234 CCCTCAACTT TTTATTTCAT TTGCGATTCT ATTTTTAGCT ATCAATTTAC CCAATTCTTA 88151 .......... .......... .......... .......... .......... .......... 234 CTTAATAGGG CATTTGTTGT GTGGGTTTTA TAAGTTTTTC ATGATTTTTT AGAAAAAAAA 88091 .......... .......... .......... .......... .......... .......... 234 AAGAAGCAGC CTTTTCTATG ATAAAGATTA AGCAATTTTC TTGGCATGGA TCCATTTGGA 88031 .......... .......... .......... .......... .......... .......... 234 TATACCTCAA CATGTTATTC TTTGTTTTCT TTTACTTATT CGGGTTCTAC TTTCATCTGT 87971 .......... .......... .......... .......... .......... .......... 234 CAATTTAAGT AATTCACACT TGATTCTTGT TATGTCCTTT TTTTCTTTTT GGGGTTCAAG 87911 .......... .......... .......... .......... .......... .......... 234 TTTTAGCTTT CAGTTACGTA ATTCACTAGT ATGCCATTTG AGGTGAGGTT GTAGAAGTAA 87851 .......... .......... .......... .......... .......... .......... 234 AGATTTTTAG TTATGTTAAA GATTAAACAT TCTCTTGGGA TGGCTTTGGA TTATGTGGGC 87791 .......... .......... .......... .......... .......... .......... 234 TGTTTGGATG CCATTTGAGG TGAGGATTGT GCATGATTTT CAGAAAAGGA AGCATTTTTA 87731 .......... .......... .......... .......... .......... .......... 234 TGTTAAAGGA TGGTTTGAGT GAATTGTCTG TTTTCTTGTA GGAATGCTAT TGAATCCTCA 87671 ||||||||| |||||||||| .......... .......... .......... .......... .GAATGCTAT TGAATCCTCA 253 TTGTTCAAAC AGTGGTTAAA GAACATACAA ACTGAAACAG GACTGCTGGC TAATGGAGCG 87611 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTCAAAC AGTGGTTAAA GAACATACAA ACTGAAACAG GACTGCTGGC TAATGGAGCG 313 CTGTCTTTAA AACAAGTTCT TATCCAGGTT TCTATCTCAA GCTGTTCTGC TAAACTATGA 87551 |||||||||| |||||||||| ||||||| CTGTCTTTAA AACAAGTTCT TATCCAG... .......... .......... .......... 340 AGATAGTAAC CTTTACATGG TCAGTAGTTA CAATGAAATA TATTGTTGGC TAATGGGACC 87491 .......... .......... .......... .......... .......... .......... 340 ATTAGAACAC AAATTGAGTT GCTTGAACCC TTCTAAATTT TTTCCACATT GGACAATTGG 87431 .......... .......... .......... .......... .......... .......... 340 AGGAAAATGG TCTGTCTTCT GATCATAACT GATGCTGAGG CTCTTAATTA TATCTTTATT 87371 .......... .......... .......... .......... .......... .......... 340 TAGTATGTTT TGTCCTAACA TTTATCAAAA GAATGGATAT CTAGGTTGAT TGTGCACTTT 87311 .......... .......... .......... .......... .......... .......... 340 ATGCTCCTTA AAGATTCCTA TGCTTCCCTA ACATAGTTGT CAGTCGTGCT CCCTCCTAAA 87251 .......... .......... .......... .......... .......... .......... 340 GAGGATAAAA AGGAAGTCTT CTTGATGTAC GTGTCTGAAT TTTTGGAATG ATGTTAACTC 87191 .......... .......... .......... .......... .......... .......... 340 GCACTATCAG CGACCAAGAG TCCAAGACAT AGTGACTATC ACAGGATTTG AAACTGCTTT 87131 .......... .......... .......... .......... .......... .......... 340 TGGTCCTGCT ACCGCAAACA TTAAGTTTGC TTTACAGCTG ACATTCCTTT TTATGTGTTG 87071 .......... .......... .......... .......... .......... .......... 340 GAGCAGGGTG TAGATATGTT TGGAGAGCGT TTGGGGTTTC TAAAATTCAA AGCAGATATT 87011 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GGTG TAGATATGTT TGGAGAGCGT TTGGGGTTTC TAAAATTCAA AGCAGATATT 394 ATTGATAAGG AAACGGGTCA AA 86989 |||||||||| |||||||||| || ATTGATAAGG AAACGGGTCA AA 416 hqPGS_C08HBa0165B06.1-_SGN-E297538+ (88450 88217,87689 87584,87064 86989) ******************************************************************************** EST sequence 112 -strand 430 n (File: SGN-E240526-) 1 GCTATTTTAA GTATTGTCAA ACAGTTAAAT AAGTTAAAAA CCAGCTTTTA AGTCAGTTTG 61 ACCAGCTTTT AAGCTGAGCC AAACAAGCTC TTAATTCTGT TTTTGTAGCC AACTAGAAGT 121 TTTTTACCTC TTGGTCCCAT TGCTATCATC CTGCATGTGT TTCTCCAGAA CTGGGCCAAC 181 TCCTAACAAT TTAGTCTGAT ATTGCATTAT TTTGTGGGCT GTCATCATGG GTCAATGGCC 241 TTGTCCACAA TTACACACTC TGACTATACT GATGGTGGTC AATCTCACTG ATCATTTGCT 301 TCACCACGCC CAAGACGGAG GATAAAATAC CAGTTCAATA GTTTTACAAG TTCAGTATAG 361 TACAATGAAT TAAGATTTAC TCGATACAAA GTAACGAAAT AATCCTACTA ATCAAACAAA 421 GTTGACTTGT Predicted gene structure (within gDNA segment 91933 to 86946): Exon 1 91168 91078 ( 91 n); cDNA 3 93 ( 91 n); score: 0.912 Intron 1 91077 89213 (1865 n); Pd: 0.000 (s: 0.92), Pa: 0.084 (s: 0) Exon 2 89212 89186 ( 27 n); cDNA 94 120 ( 27 n); score: 0.741 MATCH C08HBa0165B06.1- SGN-E240526- 0.912 118 0.274 C PGS_C08HBa0165B06.1-_SGN-E240526- (91168 91078,89212 89186) Alignment (genomic DNA sequence = upper lines): TATTTCGAGT ATTGCCAAAC AGTTAAATAA GTCAAAAACC AGCTTTTAAG TCAGTTTGAC 91109 ||||| ||| |||| ||||| |||||||||| || ||||||| |||||||||| |||||||||| TATTTTAAGT ATTGTCAAAC AGTTAAATAA GTTAAAAACC AGCTTTTAAG TCAGTTTGAC 62 CAGCTTTTAA GCTAAGCCAA ATAGGCTCTA AATCTAGAAA CAAATAGGAT AGTCAAACCT 91049 |||||||||| ||| |||||| | | ||||| | CAGCTTTTAA GCTGAGCCAA ACAAGCTCTT A......... .......... .......... 93 GATTGAATTT ATAAAAATTT CCTTAATGCA TTTAACCAGA TACATGGGGC ATCCAACTGG 90989 .......... .......... .......... .......... .......... .......... 93 AAAATTGGCT AAAGCCTCAC ACTCGGTGTT TGTCGCTTTC ATGTCCTCTG GTAAGGATGC 90929 .......... .......... .......... .......... .......... .......... 93 TGATCCAGAT GAAAGAGATA CATTAAAGGA GCAACTTGTA TTTTATTATG TCAAGAGATC 90869 .......... .......... .......... .......... .......... .......... 93 TTTAGAGGTA ATAAAAACTA CCAAAGTTAA TTTCTGTGAT GCTTGAACTT GTTCTCTGAT 90809 .......... .......... .......... .......... .......... .......... 93 TTAACTGAAA ATTTAGGGAT ACCCTGGGAT TACTCCTTTT GAGGGAATGG CTTCTGGAGT 90749 .......... .......... .......... .......... .......... .......... 93 TGTTGCACTG GTTAGACATC TGCCTGCTGG AAGCCCGTCT ATATTCTATT GCATCCACTG 90689 .......... .......... .......... .......... .......... .......... 93 TCTCATTGAG AAGGCTGATA GCCTTTGTAG TTCAGTCGAT ACTACTCCAG AAACTGACTT 90629 .......... .......... .......... .......... .......... .......... 93 GTGGAAGAGT TGGAATGGAA AGCTGGAGCC TTTCAAGATG TTGGATTTAC TTTTTCGTCT 90569 .......... .......... .......... .......... .......... .......... 93 CCTTTCTCTT GTTGATATAC AGGTAAAAGT GGTAACAATG TTTATCTTCA ACTGGGCAAC 90509 .......... .......... .......... .......... .......... .......... 93 CTAATGATGT GCAGTTACAA GTTCAATCAT TAGAGAACAC GTGCCTTCCA TGGATATGAA 90449 .......... .......... .......... .......... .......... .......... 93 AATATTCAAT ATGTGTGATA CGTCACTTTA ATTGTTTTAC TTTCGTGTCT TCCTTTGTTA 90389 .......... .......... .......... .......... .......... .......... 93 GAAAATTTGG GTAATTGGTA TAATTTGTAG GAGCTCTTTC TTGTTACATA AAAGCTTTGG 90329 .......... .......... .......... .......... .......... .......... 93 AAAATGGATA GATGTTTCAA CTATGAAAAT GCTGATTTGT CTTAGGTGTC CTAGCCCGAT 90269 .......... .......... .......... .......... .......... .......... 93 ATATGCCTAC TGTGCAAATA TAATGCACTT GACGTGGCTG ATACTTTTTT TTGCCTCTCA 90209 .......... .......... .......... .......... .......... .......... 93 GGTTCTGCCT AGTTTGATGA AGTCACTGGC ACAGTTGGTC GTTACATTAC CACCAAGTGG 90149 .......... .......... .......... .......... .......... .......... 93 CCAGGATATC ATTCTCAATG AATTATATCA ACATGTTGCA GAATCAGATG ATGTTACACG 90089 .......... .......... .......... .......... .......... .......... 93 GAAACCGACA ATGGTTTCGT GGTTGCAGTC ACTGTCTTAT CTTAGTTATC AAAATACTAG 90029 .......... .......... .......... .......... .......... .......... 93 CAAGAAAGCA CCAAAAGTGG CAGCAAAAGA ACTACATGAT TCAATATCAG GAACTACAGA 89969 .......... .......... .......... .......... .......... .......... 93 CTCATTAAGC ATGAATAAAA TCAGTGCACG TCTGTAGAAG ATTGAGGTAT ACAATTCTCA 89909 .......... .......... .......... .......... .......... .......... 93 CTTAATTGTT GGTAATATTA CATAAGAATA CATGTCCACT GTTAATCACT GGTCCCTTGA 89849 .......... .......... .......... .......... .......... .......... 93 AATTTCATCA CATCACACAT GAATAAAACA AACAATCGTG GACAATGGTT ATGCAGGATT 89789 .......... .......... .......... .......... .......... .......... 93 CATGGATACC AGAAATGTGT AAGATGAGGT TAATGCTGAG ATTGGTGCTT CTTTAATCTG 89729 .......... .......... .......... .......... .......... .......... 93 ATGAGAAAAT GTTCATTGTT TGGACTGCAT TTGACTTGCA ATTCTGTGCA TAAAGGAATG 89669 .......... .......... .......... .......... .......... .......... 93 TTAGGTTTTA TTGCATTGTT GTTTATAAAT AAACTTGTAT TACAAAGGGA GCAATTGAGG 89609 .......... .......... .......... .......... .......... .......... 93 AGAATTCTGA AAGACTTCTC TTCTATTTAT CAAGAACTGA TGTGACAAGT CACAAGTACT 89549 .......... .......... .......... .......... .......... .......... 93 TGCAATTATA AATGTCACAC AGGAGTGAGG ACCATGAATT GGCTTTCTGG TGTTATATCC 89489 .......... .......... .......... .......... .......... .......... 93 CACATATTTC CGTGTCTATG ATTTCTGGAT TCAATTTTGA AGTTTCTTCG CAGAATTATT 89429 .......... .......... .......... .......... .......... .......... 93 AGGATCTGTT GCTAGTAATC CAGGGCAAAA TTCAACATCC AACGCCAAGG GGTGAGTTCT 89369 .......... .......... .......... .......... .......... .......... 93 CACTTCCAAG TGCTGCCTCC AAAATTGGTT TGTGGATAGC CATAAACCTG TATGGTGTAA 89309 .......... .......... .......... .......... .......... .......... 93 AATATGTTGG CTTAATGTCT GTATCCTTTG AGATTTACCA TTTGTTCATG AAGACTTGGG 89249 .......... .......... .......... .......... .......... .......... 93 TCTGCTTTGA GATGGTACCG ACACAAACTT CATCAGATTC TGTTCAACAA GCCAAGAAGA 89189 |||| |||| | ||||| ||| .......... .......... .......... ......ATTC TGTTTTTGTA GCCAACTAGA 117 AGT 89186 ||| AGT 120 hqPGS_C08HBa0165B06.1-_SGN-E240526- (91168 91078,89212 89186) ******************************************************************************** EST sequence 334 +strand 576 n (File: SGN-E275721+) 1 GAAGATTGAG GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC TGAGATTGGT 61 GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT TGCAATTCTG 121 TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT GTATTACAAA 181 GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA CTGATGTGAC 241 AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG AATTGGCTTT 301 CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT TTGAAGTTTC 361 TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC ATCCAACGCC 421 AAGGGGTGAG TTCTCACTTC CAAGTGCTGC CTCCAAAATT GGTTTGTGGA TAGCCATAAA 481 CCTGTATGGT GTAAAATATG TTGGCTTAAT GTCTGTATCC TTTGAGATTT ACCATTTGTT 541 CATGAAGACT TGGGTCTGCT TTGAGATGGT ACCGAC Predicted gene structure (within gDNA segment 90474 to 88617): Exon 1 89932 89923 ( 10 n); cDNA 1 10 ( 10 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 (s: 0), Pa: 0.982 (s: 1.00) Exon 2 89792 89227 ( 566 n); cDNA 11 576 ( 566 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E275721+ 1.000 576 1.000 C PGS_C08HBa0165B06.1-_SGN-E275721+ (89932 89923,89792 89227) Alignment (genomic DNA sequence = upper lines): GAAGATTGAG GTATACAATT CTCACTTAAT TGTTGGTAAT ATTACATAAG AATACATGTC 89873 |||||||||| GAAGATTGAG .......... .......... .......... .......... .......... 10 CACTGTTAAT CACTGGTCCC TTGAAATTTC ATCACATCAC ACATGAATAA AACAAACAAT 89813 .......... .......... .......... .......... .......... .......... 10 CGTGGACAAT GGTTATGCAG GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC 89753 |||||||||| |||||||||| |||||||||| |||||||||| .......... .......... GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC 50 TGAGATTGGT GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT 89693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGATTGGT GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT 110 TGCAATTCTG TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT 89633 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATTCTG TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT 170 GTATTACAAA GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA 89573 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTACAAA GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA 230 CTGATGTGAC AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG 89513 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGATGTGAC AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG 290 AATTGGCTTT CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT 89453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGCTTT CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT 350 TTGAAGTTTC TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC 89393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAGTTTC TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC 410 ATCCAACGCC AAGGGGTGAG TTCTCACTTC CAAGTGCTGC CTCCAAAATT GGTTTGTGGA 89333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCAACGCC AAGGGGTGAG TTCTCACTTC CAAGTGCTGC CTCCAAAATT GGTTTGTGGA 470 TAGCCATAAA CCTGTATGGT GTAAAATATG TTGGCTTAAT GTCTGTATCC TTTGAGATTT 89273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCCATAAA CCTGTATGGT GTAAAATATG TTGGCTTAAT GTCTGTATCC TTTGAGATTT 530 ACCATTTGTT CATGAAGACT TGGGTCTGCT TTGAGATGGT ACCGAC 89227 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ACCATTTGTT CATGAAGACT TGGGTCTGCT TTGAGATGGT ACCGAC 576 hqPGS_C08HBa0165B06.1-_SGN-E275721+ (89932 89923,89792 89227) ******************************************************************************** EST sequence 335 +strand 559 n (File: SGN-E393840+) 1 AGAAGATTGA GGATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG CTGAGATTGG 61 TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC TTGCAATTCT 121 GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT TGTATTACAA 181 AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA ACTGATGTGA 241 CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT GAATTGGCTT 301 TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT TTTGAAGTTT 361 CTTCGCAGAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA CATCCGGCGC 421 CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCCAAAAT TGGTTTGTGG ATAGCCATAA 481 ACCCTGTATG GTGTAAAATA TGTTGGCTTA ATGTCTGTAT CCTTTGAGAT TTACCATTTG 541 TTCTTGAAGA CTTGGGTCT Predicted gene structure (within gDNA segment 90484 to 88492): Exon 1 89933 89923 ( 11 n); cDNA 1 11 ( 11 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 (s: 0), Pa: 0.982 (s: 1.00) Exon 2 89792 89246 ( 547 n); cDNA 12 559 ( 548 n); score: 0.990 MATCH C08HBa0165B06.1- SGN-E393840+ 0.990 558 0.998 C PGS_C08HBa0165B06.1-_SGN-E393840+ (89933 89923,89792 89246) Alignment (genomic DNA sequence = upper lines): AGAAGATTGA GGTATACAAT TCTCACTTAA TTGTTGGTAA TATTACATAA GAATACATGT 89874 |||||||||| | AGAAGATTGA G......... .......... .......... .......... .......... 11 CCACTGTTAA TCACTGGTCC CTTGAAATTT CATCACATCA CACATGAATA AAACAAACAA 89814 .......... .......... .......... .......... .......... .......... 11 TCGTGGACAA TGGTTATGCA GGATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG 89754 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .GATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG 50 CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 89694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 110 TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 89634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 170 TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 89574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 230 ACTGATGTGA CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT 89514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGATGTGA CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT 290 GAATTGGCTT TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT 89454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATTGGCTT TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT 350 TTTGAAGTTT CTTCGCAGAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA 89394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGAAGTTT CTTCGCAGAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA 410 CATCCAACGC CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCCAAAAT TGGTTTGTGG 89334 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGCGC CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCCAAAAT TGGTTTGTGG 470 ATAGCCATAA A-CCTGTATG GTGTAAAATA TGTTGGCTTA ATGTCTGTAT CCTTTGAGAT 89275 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCCATAA ACCCTGTATG GTGTAAAATA TGTTGGCTTA ATGTCTGTAT CCTTTGAGAT 530 TTACCATTTG TTCATGAAGA CTTGGGTCT 89246 |||||||||| ||| |||||| ||||||||| TTACCATTTG TTCTTGAAGA CTTGGGTCT 559 hqPGS_C08HBa0165B06.1-_SGN-E393840+ (89933 89923,89792 89246) ******************************************************************************** EST sequence 351 +strand 540 n (File: SGN-E393601+) 1 AGAAGATTGA GGATTCATGG ATACCAAAAA TGTGTAAGAT GACGTTAATG CTGAGATTGG 61 TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC TTGCAATTCT 121 GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT TGTATTACAA 181 AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA ACTGATGTGA 241 CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT GAATTGGCTT 301 TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT TTTGAAGTTT 361 CTTCGCAAAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA CATCCAACGC 421 CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCCAAAAA TTGGTTTGTG GATAGCCATA 481 ACCCTGTATG GTGTAAAATA TGTTGGCTTA ATTGTCTGTA TCCTTTTAGA TTTACCATTT Predicted gene structure (within gDNA segment 90484 to 88403): Exon 1 89933 89923 ( 11 n); cDNA 1 11 ( 11 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 (s: 0), Pa: 0.982 (s: 0.96) Exon 2 89792 89266 ( 527 n); cDNA 12 540 ( 529 n); score: 0.981 MATCH C08HBa0165B06.1- SGN-E393601+ 0.981 538 0.996 C PGS_C08HBa0165B06.1-_SGN-E393601+ (89933 89923,89792 89266) Alignment (genomic DNA sequence = upper lines): AGAAGATTGA GGTATACAAT TCTCACTTAA TTGTTGGTAA TATTACATAA GAATACATGT 89874 |||||||||| | AGAAGATTGA G......... .......... .......... .......... .......... 11 CCACTGTTAA TCACTGGTCC CTTGAAATTT CATCACATCA CACATGAATA AAACAAACAA 89814 .......... .......... .......... .......... .......... .......... 11 TCGTGGACAA TGGTTATGCA GGATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG 89754 ||||||||| |||||| ||| |||||||||| || ||||||| .......... .......... .GATTCATGG ATACCAAAAA TGTGTAAGAT GACGTTAATG 50 CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 89694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 110 TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 89634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 170 TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 89574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 230 ACTGATGTGA CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT 89514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGATGTGA CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGAGGACCAT 290 GAATTGGCTT TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT 89454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATTGGCTT TCTGGTGTTA TATCCCACAT ATTTCCGTGT CTATGATTTC TGGATTCAAT 350 TTTGAAGTTT CTTCGCAGAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA 89394 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTGAAGTTT CTTCGCAAAA TTATTAGGAT CTGTTGCTAG TAATCCAGGG CAAAATTCAA 410 CATCCAACGC CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCC-AAAA TTGGTTTGTG 89335 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CATCCAACGC CAAGGGGTGA GTTCTCACTT CCAAGTGCTG CCTCCAAAAA TTGGTTTGTG 470 GATAGCCATA AACCTGTATG GTGTAAAATA TGTTGGCTTA A-TGTCTGTA TCCTTTGAGA 89276 |||||||||| | |||||||| |||||||||| |||||||||| | |||||||| |||||| ||| GATAGCCATA ACCCTGTATG GTGTAAAATA TGTTGGCTTA ATTGTCTGTA TCCTTTTAGA 530 TTTACCATTT 89266 |||||||||| TTTACCATTT 540 hqPGS_C08HBa0165B06.1-_SGN-E393601+ (89933 89923,89792 89266) ******************************************************************************** EST sequence 369 +strand 437 n (File: SGN-E274001+) 1 GAAGATTGAG GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC TGAGATTGGT 61 GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT TGCAATTCTG 121 TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT GTATTACAAA 181 GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA CTGATGTGAC 241 AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG AATTGGCTTT 301 CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT TTGAAGTTTC 361 TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC ATCCAACGCC 421 AAGGGGTGAG TTCTCAC Predicted gene structure (within gDNA segment 90474 to 88756): Exon 1 89932 89923 ( 10 n); cDNA 1 10 ( 10 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 (s: 0), Pa: 0.982 (s: 1.00) Exon 2 89792 89366 ( 427 n); cDNA 11 437 ( 427 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E274001+ 1.000 437 1.000 C PGS_C08HBa0165B06.1-_SGN-E274001+ (89932 89923,89792 89366) Alignment (genomic DNA sequence = upper lines): GAAGATTGAG GTATACAATT CTCACTTAAT TGTTGGTAAT ATTACATAAG AATACATGTC 89873 |||||||||| GAAGATTGAG .......... .......... .......... .......... .......... 10 CACTGTTAAT CACTGGTCCC TTGAAATTTC ATCACATCAC ACATGAATAA AACAAACAAT 89813 .......... .......... .......... .......... .......... .......... 10 CGTGGACAAT GGTTATGCAG GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC 89753 |||||||||| |||||||||| |||||||||| |||||||||| .......... .......... GATTCATGGA TACCAGAAAT GTGTAAGATG AGGTTAATGC 50 TGAGATTGGT GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT 89693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGATTGGT GCTTCTTTAA TCTGATGAGA AAATGTTCAT TGTTTGGACT GCATTTGACT 110 TGCAATTCTG TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT 89633 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATTCTG TGCATAAAGG AATGTTAGGT TTTATTGCAT TGTTGTTTAT AAATAAACTT 170 GTATTACAAA GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA 89573 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTACAAA GGGAGCAATT GAGGAGAATT CTGAAAGACT TCTCTTCTAT TTATCAAGAA 230 CTGATGTGAC AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG 89513 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGATGTGAC AAGTCACAAG TACTTGCAAT TATAAATGTC ACACAGGAGT GAGGACCATG 290 AATTGGCTTT CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT 89453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGCTTT CTGGTGTTAT ATCCCACATA TTTCCGTGTC TATGATTTCT GGATTCAATT 350 TTGAAGTTTC TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC 89393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAGTTTC TTCGCAGAAT TATTAGGATC TGTTGCTAGT AATCCAGGGC AAAATTCAAC 410 ATCCAACGCC AAGGGGTGAG TTCTCAC 89366 |||||||||| |||||||||| ||||||| ATCCAACGCC AAGGGGTGAG TTCTCAC 437 hqPGS_C08HBa0165B06.1-_SGN-E274001+ (89932 89923,89792 89366) ******************************************************************************** EST sequence 93 -strand 455 n (File: SGN-E393839-) 1 GTGAAGTTGC ATTTTTTTTT TATGCCAAGC TTTTGGGTGA GGAAAATGTG CTTTCCATAT 61 TTTGCTCTCA CTCACTTTAT CGAGCTTCCC TCATATCAAA AAAATCCTGC TTTACTTGGT 121 ATTTATGCCG AATTGTGAAG CAACTTTGCC ACTGCTCATC CTATACCATA TCATGATGCC 181 CCTTCCTCCA ACGAACAAAT GCTGGAAAAG ATTGAAAATG TTGTAACATA GACATTATAC 241 AACTTCTTGA CTATACAGTT ATATGATTGA TTATACTGAA TTACAACTAT TTTGTTAGCA 301 TAAATGGTCA AGAAACACTG TGAAGTGTTT TTCCCTCAGT TCACTTTTTT AGTAGGACTG 361 GATACTTCCC AGAGATGTAT ATTTAGCTGC CTTCCCCTTG GTGTATGTTT GAGCTTGAAT 421 AAAATGCTCC TTTAAAGAAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 90334 to 87932): Exon 1 89175 88738 ( 438 n); cDNA 1 438 ( 438 n); score: 0.957 PPA cDNA 439 455 MATCH C08HBa0165B06.1- SGN-E393839- 0.957 438 0.963 C PGS_C08HBa0165B06.1-_SGN-E393839- (89175 88738) Alignment (genomic DNA sequence = upper lines): GTGAAGTTGC ATTTTCTTTT TATGCCAAGC TTCTGGCTGA GGAAATTGTG CTTTCCATAT 89116 |||||||||| ||||| |||| |||||||||| || ||| ||| ||||| |||| |||||||||| GTGAAGTTGC ATTTTTTTTT TATGCCAAGC TTTTGGGTGA GGAAAATGTG CTTTCCATAT 60 CTTGCTCTCA CTCACTTTAT CGAGCTTCCC TCATCTCAGC TTGTTCCTGC TTTACTTGGT 89056 ||||||||| |||||||||| |||||||||| |||| ||| |||||| |||||||||| TTTGCTCTCA CTCACTTTAT CGAGCTTCCC TCATATCAAA AAAATCCTGC TTTACTTGGT 120 ATTTATGCCG AATTGTGAAG CAACTCTGCC ACTGCTCATC CTATACCATA TCATGATGCC 88996 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ATTTATGCCG AATTGTGAAG CAACTTTGCC ACTGCTCATC CTATACCATA TCATGATGCC 180 CCTTCCTCCA ACGAACAAAT GCTGGAAAAG ATTGAAAATG TTGTAACATA GACATTATAC 88936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCCTCCA ACGAACAAAT GCTGGAAAAG ATTGAAAATG TTGTAACATA GACATTATAC 240 AACTTCTTGA CTATACAGTT ATATGATTGA TTATACTGAA TTACAACTAT TCTGTTAGCA 88876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| AACTTCTTGA CTATACAGTT ATATGATTGA TTATACTGAA TTACAACTAT TTTGTTAGCA 300 TAAATGGTCA AGAAACACTG TGAAGTGTTC TTCCCTCAGT TCACTCTTCT AGTAGGACTG 88816 |||||||||| |||||||||| ||||||||| |||||||||| ||||| || | |||||||||| TAAATGGTCA AGAAACACTG TGAAGTGTTT TTCCCTCAGT TCACTTTTTT AGTAGGACTG 360 GATACTTCCC AGAGATGTAT ATTTAGCTGC CTTCCCCTTG GTGTATGTTT GAGCTTGAAT 88756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATACTTCCC AGAGATGTAT ATTTAGCTGC CTTCCCCTTG GTGTATGTTT GAGCTTGAAT 420 AAAATGCTCC TTTACTGA 88738 |||||||||| |||| || AAAATGCTCC TTTAAAGA 438 hqPGS_C08HBa0165B06.1-_SGN-E393839- (89175 88738) ******************************************************************************** EST sequence 94 -strand 229 n (File: SGN-E393853-) 1 ATAGACATTA TACAACTTCT TGACTATACA GTTATATGAT TGATTATACT GAATTACAAC 61 TATTTTGTTA GCATAAATGG TCAAGAAACA CTGTGAAGTG TTTTTCCCTC AGCTCACTTT 121 TTTAGTAGGA CTGGATACTT CCCAGAGATG TATATTTAGC TGCCTTCCAC CTTGCTGTAT 181 GTTTGAGCTT GAATAAAATG CTCCTTTAAA GAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 89558 to 87932): Exon 1 88948 88738 ( 211 n); cDNA 1 212 ( 212 n); score: 0.950 PPA cDNA 213 229 MATCH C08HBa0165B06.1- SGN-E393853- 0.950 211 0.921 C PGS_C08HBa0165B06.1-_SGN-E393853- (88948 88738) Alignment (genomic DNA sequence = upper lines): ATAGACATTA TACAACTTCT TGACTATACA GTTATATGAT TGATTATACT GAATTACAAC 88889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGACATTA TACAACTTCT TGACTATACA GTTATATGAT TGATTATACT GAATTACAAC 60 TATTCTGTTA GCATAAATGG TCAAGAAACA CTGTGAAGTG TTCTTCCCTC AGTTCACTCT 88829 |||| ||||| |||||||||| |||||||||| |||||||||| || ||||||| || ||||| | TATTTTGTTA GCATAAATGG TCAAGAAACA CTGTGAAGTG TTTTTCCCTC AGCTCACTTT 120 TCTAGTAGGA CTGGATACTT CCCAGAGATG TATATTTAGC TGCCTTCC-C CTTGGTGTAT 88770 | |||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| TTTAGTAGGA CTGGATACTT CCCAGAGATG TATATTTAGC TGCCTTCCAC CTTGCTGTAT 180 GTTTGAGCTT GAATAAAATG CTCCTTTACT GA 88738 |||||||||| |||||||||| |||||||| || GTTTGAGCTT GAATAAAATG CTCCTTTAAA GA 212 hqPGS_C08HBa0165B06.1-_SGN-E393853- (88948 88738) ******************************************************************************** EST sequence 336 +strand 283 n (File: SGN-E394012+) 1 AGAAGATTGA GGATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG CTGAGATTGG 61 TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC TTGCAATTCT 121 GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT TGTATTACAA 181 AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA ACTGATGTGA 241 CAAGTCACAA GTACTTGGAA TTATAAATGT CACACAGGAG TGA Predicted gene structure (within gDNA segment 90484 to 88911): Exon 1 89933 89923 ( 11 n); cDNA 1 11 ( 11 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 (s: 0), Pa: 0.982 (s: 1.00) Exon 2 89792 89521 ( 272 n); cDNA 12 283 ( 272 n); score: 0.996 MATCH C08HBa0165B06.1- SGN-E394012+ 0.996 283 1.000 C PGS_C08HBa0165B06.1-_SGN-E394012+ (89933 89923,89792 89521) Alignment (genomic DNA sequence = upper lines): AGAAGATTGA GGTATACAAT TCTCACTTAA TTGTTGGTAA TATTACATAA GAATACATGT 89874 |||||||||| | AGAAGATTGA G......... .......... .......... .......... .......... 11 CCACTGTTAA TCACTGGTCC CTTGAAATTT CATCACATCA CACATGAATA AAACAAACAA 89814 .......... .......... .......... .......... .......... .......... 11 TCGTGGACAA TGGTTATGCA GGATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG 89754 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .GATTCATGG ATACCAGAAA TGTGTAAGAT GAGGTTAATG 50 CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 89694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGATTGG TGCTTCTTTA ATCTGATGAG AAAATGTTCA TTGTTTGGAC TGCATTTGAC 110 TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 89634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAATTCT GTGCATAAAG GAATGTTAGG TTTTATTGCA TTGTTGTTTA TAAATAAACT 170 TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 89574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTATTACAA AGGGAGCAAT TGAGGAGAAT TCTGAAAGAC TTCTCTTCTA TTTATCAAGA 230 ACTGATGTGA CAAGTCACAA GTACTTGCAA TTATAAATGT CACACAGGAG TGA 89521 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ||| ACTGATGTGA CAAGTCACAA GTACTTGGAA TTATAAATGT CACACAGGAG TGA 283 hqPGS_C08HBa0165B06.1-_SGN-E394012+ (89933 89923,89792 89521) ******************************************************************************** EST sequence 158 +strand 471 n (File: SGN-E269749+) 1 TGGACAATGG TTATGCAGGA TTCATGGATA CCAGAAATGT GTGAGATGAG GTTAATGCTG 61 AGATTGGTGC TTCTTTAATC TGATGAGAAA ATGTTCATTG TTTGGACTGC ATTTGACTTG 121 CAATTCTGTG CATAAAGGAA TGTTAGGTTT TATTGCATTG TTGTTTATAA ATAAACTTGT 181 ATTACAAAGG GAGCAATTGA GGAGAATTCT GAAAGACTTC TCTTCTATTT ATCAAGAACT 241 GATGTGACAA GTCACAAGTA CTTGCAATTA TAAATGTCAC ACAGGAGTGA GGACCATGAA 301 TTGGCTTTCT GGTGTTATAT CCCACATATT TCCGTGTCTA TGATTTCTGG ATTCAATTTT 361 GAAGTTTCTT CGCAGAATTA TTAGGATCTG TTGCTAGTAA TCCAGGGCAA AATTCAACAT 421 CCAACGCCAA GGGGTGAGTT CTCACTTTCA AGTGCTGCCT CCAAAATTGG T Predicted gene structure (within gDNA segment 90410 to 88730): Exon 1 89810 89340 ( 471 n); cDNA 1 471 ( 471 n); score: 0.996 MATCH C08HBa0165B06.1- SGN-E269749+ 0.996 471 1.000 C PGS_C08HBa0165B06.1-_SGN-E269749+ (89810 89340) Alignment (genomic DNA sequence = upper lines): TGGACAATGG TTATGCAGGA TTCATGGATA CCAGAAATGT GTAAGATGAG GTTAATGCTG 89751 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TGGACAATGG TTATGCAGGA TTCATGGATA CCAGAAATGT GTGAGATGAG GTTAATGCTG 60 AGATTGGTGC TTCTTTAATC TGATGAGAAA ATGTTCATTG TTTGGACTGC ATTTGACTTG 89691 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTGGTGC TTCTTTAATC TGATGAGAAA ATGTTCATTG TTTGGACTGC ATTTGACTTG 120 CAATTCTGTG CATAAAGGAA TGTTAGGTTT TATTGCATTG TTGTTTATAA ATAAACTTGT 89631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTCTGTG CATAAAGGAA TGTTAGGTTT TATTGCATTG TTGTTTATAA ATAAACTTGT 180 ATTACAAAGG GAGCAATTGA GGAGAATTCT GAAAGACTTC TCTTCTATTT ATCAAGAACT 89571 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTACAAAGG GAGCAATTGA GGAGAATTCT GAAAGACTTC TCTTCTATTT ATCAAGAACT 240 GATGTGACAA GTCACAAGTA CTTGCAATTA TAAATGTCAC ACAGGAGTGA GGACCATGAA 89511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGTGACAA GTCACAAGTA CTTGCAATTA TAAATGTCAC ACAGGAGTGA GGACCATGAA 300 TTGGCTTTCT GGTGTTATAT CCCACATATT TCCGTGTCTA TGATTTCTGG ATTCAATTTT 89451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCTTTCT GGTGTTATAT CCCACATATT TCCGTGTCTA TGATTTCTGG ATTCAATTTT 360 GAAGTTTCTT CGCAGAATTA TTAGGATCTG TTGCTAGTAA TCCAGGGCAA AATTCAACAT 89391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGTTTCTT CGCAGAATTA TTAGGATCTG TTGCTAGTAA TCCAGGGCAA AATTCAACAT 420 CCAACGCCAA GGGGTGAGTT CTCACTTCCA AGTGCTGCCT CCAAAATTGG T 89340 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| | CCAACGCCAA GGGGTGAGTT CTCACTTTCA AGTGCTGCCT CCAAAATTGG T 471 hqPGS_C08HBa0165B06.1-_SGN-E269749+ (89810 89340) ******************************************************************************** EST sequence 293 +strand 662 n (File: SGN-E376754+) 1 TTTTTTTTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA TTGTCAAACA 61 GCTAAATAAG TCAAAAACCA GCTTTTTAAG TCAGTTTGAC CAGTTTTTAA GCTGAGCCAA 121 ACAGGCTCTA AGAGGATCAA AGAAAGTACA CAAACTTAAA GAAAATAAGT AGAGATCACA 181 CCACTCATAC AATAAAACAT TACATTCAAT GAAGGTTCAA TACATCGAGA TGGTAAGACT 241 AACATTATAC TAGACAAGAG CCTACCCAAT GAATTATTTT TGGATTTTTT CACATTTTTG 301 ACAAGTCTAA ACTTCAAATG TAACAAGAGG ATAATGGAAT TACTTGGCCA TCATGACCTT 361 AACAAACTCC TCATAGTTGA TTTGTCCATC ACCATCAACA TCAGCTTCCC TAATCATCTC 421 ATCGACTTCT TCATCAGTAA GCTTCTCTCC AAGGTTAGTC ATCACATGAC GAAGCTCAGC 481 AGCGGAGATG AAGCCATTTT GATCCTTGTC GAAAACTCTG AATGCCTCTT TCAACTCCTC 541 CTCAGAGTCA GTATCCTTCA TCTTCCTGGC CATAAGGTTT AGAAACTCTG GGAAGTCGAT 601 GGTTCCATTA CCATCTGCAT CCACCTCGTT TATCATGTCC TGGAGCTCAG CTTTAGTAGG 661 GT Predicted gene structure (within gDNA segment 91870 to 84906): Exon 1 91207 91051 ( 157 n); cDNA 1 155 ( 155 n); score: 0.850 Intron 1 91050 90495 ( 556 n); Pd: 0.000 (s: 0.72), Pa: 0.869 (s: 0) Exon 2 90494 90469 ( 26 n); cDNA 156 179 ( 24 n); score: 0.731 MATCH C08HBa0165B06.1- SGN-E376754+ 0.850 183 0.276 C PGS_C08HBa0165B06.1-_SGN-E376754+ (91207 91051,90494 90469) Alignment (genomic DNA sequence = upper lines): TTTTGGCTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTCGAGTA TTGCCAAACA 91148 |||| ||| |||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| TTTTTTTTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA TTGTCAAACA 60 GTTAAATAAG TCAAAAACCA GCTTTT-AAG TCAGTTTGAC CAGCTTTTAA GCTAAGCCAA 91089 | |||||||| |||||||||| |||||| ||| |||||||||| ||| |||||| ||| |||||| GCTAAATAAG TCAAAAACCA GCTTTTTAAG TCAGTTTGAC CAGTTTTTAA GCTGAGCCAA 120 ATAGGCTCTA AATCTAGAAA CAAATAGGAT AGTCAAACCT GATTGAATTT ATAAAAATTT 91029 | ||||||| || || | |||| | | | ||||| ACAGGCTCT- AA--GAGGAT CAAAGAAAGT ACACAAAC.. .......... .......... 155 CCTTAATGCA TTTAACCAGA TACATGGGGC ATCCAACTGG AAAATTGGCT AAAGCCTCAC 90969 .......... .......... .......... .......... .......... .......... 155 ACTCGGTGTT TGTCGCTTTC ATGTCCTCTG GTAAGGATGC TGATCCAGAT GAAAGAGATA 90909 .......... .......... .......... .......... .......... .......... 155 CATTAAAGGA GCAACTTGTA TTTTATTATG TCAAGAGATC TTTAGAGGTA ATAAAAACTA 90849 .......... .......... .......... .......... .......... .......... 155 CCAAAGTTAA TTTCTGTGAT GCTTGAACTT GTTCTCTGAT TTAACTGAAA ATTTAGGGAT 90789 .......... .......... .......... .......... .......... .......... 155 ACCCTGGGAT TACTCCTTTT GAGGGAATGG CTTCTGGAGT TGTTGCACTG GTTAGACATC 90729 .......... .......... .......... .......... .......... .......... 155 TGCCTGCTGG AAGCCCGTCT ATATTCTATT GCATCCACTG TCTCATTGAG AAGGCTGATA 90669 .......... .......... .......... .......... .......... .......... 155 GCCTTTGTAG TTCAGTCGAT ACTACTCCAG AAACTGACTT GTGGAAGAGT TGGAATGGAA 90609 .......... .......... .......... .......... .......... .......... 155 AGCTGGAGCC TTTCAAGATG TTGGATTTAC TTTTTCGTCT CCTTTCTCTT GTTGATATAC 90549 .......... .......... .......... .......... .......... .......... 155 AGGTAAAAGT GGTAACAATG TTTATCTTCA ACTGGGCAAC CTAATGATGT GCAGTTACAA 90489 ||| || .......... .......... .......... .......... .......... ....TTA-AA 160 GTTCAATCAT TAGAGAACAC 90469 | ||| | |||||| ||| G-AAAATAAG TAGAGATCAC 179 hqPGS_C08HBa0165B06.1-_SGN-E376754+ (91207 91051,90494 90469) ******************************************************************************** EST sequence 6 -strand 387 n (File: SGN-E577960-) 1 AACTTAAAAT AAGCTGTTTT GAGTATTGCC AAACAGTTAA ATAAGTCAAA AACCAGCTTT 61 TAAGTCAGTT TGACCAGCTT TTAAGCTGAG CCAAACAGGC TCTAAGTTGC TCAAAAGTGG 121 TTTTTGGAGC CTTTGGGAGC TTCGAGTGTC GGAATAAAGT TCCATCAATA CCATCAGTAC 181 CGGAATGTGG AATCTGAGTT GTGAGAGTTG TTCGTTTCGT ATTCTGAGTC TTTTTGAGGA 241 TTTGAGGTCC TAAGTTGTGA AATTGTGGGC TTTTGGGTTG ACTTTGGTGA ACATTCGGGG 301 TTTGGATGCT CGGCTCAGAA TTTCCGAGTG TTTTGTTGAA TTTGGGGGAT GATTTTTGAG 361 AGGTTTCGAG CTTGTTTTAC ACTTTTG Predicted gene structure (within gDNA segment 91972 to 87496): Exon 1 91182 91056 ( 127 n); cDNA 1 125 ( 125 n); score: 0.866 Intron 1 91055 90793 ( 263 n); Pd: 0.000 (s: 0.72), Pa: 0.998 (s: 0) Exon 2 90792 90763 ( 30 n); cDNA 126 153 ( 28 n); score: 0.567 Intron 2 90762 90495 ( 268 n); Pd: 0.000 (s: 0), Pa: 0.869 (s: 0) Exon 3 90494 90481 ( 14 n); cDNA 154 166 ( 13 n); score: 0.786 Intron 3 90480 89793 ( 688 n); Pd: 0.000 (s: 0), Pa: 0.982 (s: 0) Exon 4 89792 89761 ( 32 n); cDNA 167 198 ( 32 n); score: 0.609 MATCH C08HBa0165B06.1- SGN-E577960- 0.866 203 0.525 C PGS_C08HBa0165B06.1-_SGN-E577960- (91182 91056,90792 90763,90494 90481,89792 89761) Alignment (genomic DNA sequence = upper lines): AACTTAAAAT AAGTTATTTC GAGTATTGCC AAACAGTTAA ATAAGTCAAA AACCAGCTTT 91123 |||||||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTAAAAT AAGCTGTTTT GAGTATTGCC AAACAGTTAA ATAAGTCAAA AACCAGCTTT 60 TAAGTCAGTT TGACCAGCTT TTAAGCTAAG CCAAATAGGC TCTAAATCTA GAAACAAATA 91063 |||||||||| |||||||||| ||||||| || ||||| |||| ||||| | | | ||| TAAGTCAGTT TGACCAGCTT TTAAGCTGAG CCAAACAGGC TCTAAGT-T- GCTCAAAAGT 118 GGATAGTCAA ACCTGATTGA ATTTATAAAA ATTTCCTTAA TGCATTTAAC CAGATACATG 91003 || | | GGTTTTT... .......... .......... .......... .......... .......... 125 GGGCATCCAA CTGGAAAATT GGCTAAAGCC TCACACTCGG TGTTTGTCGC TTTCATGTCC 90943 .......... .......... .......... .......... .......... .......... 125 TCTGGTAAGG ATGCTGATCC AGATGAAAGA GATACATTAA AGGAGCAACT TGTATTTTAT 90883 .......... .......... .......... .......... .......... .......... 125 TATGTCAAGA GATCTTTAGA GGTAATAAAA ACTACCAAAG TTAATTTCTG TGATGCTTGA 90823 .......... .......... .......... .......... .......... .......... 125 ACTTGTTCTC TGATTTAACT GAAAATTTAG GGATACCCTG GGATTACTCC TTTTGAGGGA 90763 ||| | || ||| || | || ||| .......... .......... .......... GGAGCCTTTG GGA--GCTTC GAGTGTCGGA 153 ATGGCTTCTG GAGTTGTTGC ACTGGTTAGA CATCTGCCTG CTGGAAGCCC GTCTATATTC 90703 .......... .......... .......... .......... .......... .......... 153 TATTGCATCC ACTGTCTCAT TGAGAAGGCT GATAGCCTTT GTAGTTCAGT CGATACTACT 90643 .......... .......... .......... .......... .......... .......... 153 CCAGAAACTG ACTTGTGGAA GAGTTGGAAT GGAAAGCTGG AGCCTTTCAA GATGTTGGAT 90583 .......... .......... .......... .......... .......... .......... 153 TTACTTTTTC GTCTCCTTTC TCTTGTTGAT ATACAGGTAA AAGTGGTAAC AATGTTTATC 90523 .......... .......... .......... .......... .......... .......... 153 TTCAACTGGG CAACCTAATG ATGTGCAGTT ACAAGTTCAA TCATTAGAGA ACACGTGCCT 90463 | | |||||| | || .......... .......... ........AT A-AAGTTCCA TC........ .......... 166 TCCATGGATA TGAAAATATT CAATATGTGT GATACGTCAC TTTAATTGTT TTACTTTCGT 90403 .......... .......... .......... .......... .......... .......... 166 GTCTTCCTTT GTTAGAAAAT TTGGGTAATT GGTATAATTT GTAGGAGCTC TTTCTTGTTA 90343 .......... .......... .......... .......... .......... .......... 166 CATAAAAGCT TTGGAAAATG GATAGATGTT TCAACTATGA AAATGCTGAT TTGTCTTAGG 90283 .......... .......... .......... .......... .......... .......... 166 TGTCCTAGCC CGATATATGC CTACTGTGCA AATATAATGC ACTTGACGTG GCTGATACTT 90223 .......... .......... .......... .......... .......... .......... 166 TTTTTTGCCT CTCAGGTTCT GCCTAGTTTG ATGAAGTCAC TGGCACAGTT GGTCGTTACA 90163 .......... .......... .......... .......... .......... .......... 166 TTACCACCAA GTGGCCAGGA TATCATTCTC AATGAATTAT ATCAACATGT TGCAGAATCA 90103 .......... .......... .......... .......... .......... .......... 166 GATGATGTTA CACGGAAACC GACAATGGTT TCGTGGTTGC AGTCACTGTC TTATCTTAGT 90043 .......... .......... .......... .......... .......... .......... 166 TATCAAAATA CTAGCAAGAA AGCACCAAAA GTGGCAGCAA AAGAACTACA TGATTCAATA 89983 .......... .......... .......... .......... .......... .......... 166 TCAGGAACTA CAGACTCATT AAGCATGAAT AAAATCAGTG CACGTCTGTA GAAGATTGAG 89923 .......... .......... .......... .......... .......... .......... 166 GTATACAATT CTCACTTAAT TGTTGGTAAT ATTACATAAG AATACATGTC CACTGTTAAT 89863 .......... .......... .......... .......... .......... .......... 166 CACTGGTCCC TTGAAATTTC ATCACATCAC ACATGAATAA AACAAACAAT CGTGGACAAT 89803 .......... .......... .......... .......... .......... .......... 166 GGTTATGCAG GAT-TCATGG ATACCAGAAA TGTGTAAGAT GAG 89761 || ||| |||| | || |||| || | ||| .......... AATACCATCA GTACC-GGAA TGTGGAATCT GAG 198 hqPGS_C08HBa0165B06.1-_SGN-E577960- (91182 91056,90792 90763,90494 90481) ******************************************************************************** EST sequence 54 -strand 540 n (File: SGN-E253695-) 1 TTTTAAAATA AGCAATTATG CGTTTGGATA AAAGTGTTGA AGTTGTTATG CCAAACGTGA 61 AAAGGGAAAA ATAGAAGAAA GAGAAGTTAG TGTTATATGG GTAATTTGGA GATTGTATAA 121 AAATATTAAG GGAAAAAACA TAAAAATATG GTCAACTTAA AACAGCTTAT AAGCTAAAAA 181 AAAAAAGCAC ACTTTTGGCT TAAAATAAGT TTTTTTAACT TAAAATAAGC TATTTTGAGT 241 ATTGCCAAAC ATTTAAATAA GTCAAAAACC AGCTTTTAAG TCAGTTTGAC CAGCTTTTAA 301 GCTGAGCCAA ACAGGCTCTA AAGCTCGAGA TAGTGAAACT CTAAGATGAT CAATTAAGGA 361 ACTGGTGTTG GTTGTTTTTA GTAGATCTCT TACTTGTTCA AATGCAGGCA TGAGGAAGAG 421 GAGTCCAGTT TGAAAGTAGT CAATTTGAAG CTCAAGAATG TCCCATGGTG TCAACTCAAT 481 AATCTTACAA TTATCTGTAT GGTGCTGACT TTTTCCCTCA GCTTTAACCG TCCATTTTGA Predicted gene structure (within gDNA segment 92720 to 88126): Exon 1 91809 91759 ( 51 n); cDNA 94 141 ( 48 n); score: 0.657 Intron 1 91758 91277 ( 482 n); Pd: 0.000 (s: 0.64), Pa: 0.000 (s: 0.86) Exon 2 91276 91066 ( 211 n); cDNA 142 333 ( 192 n); score: 0.848 Intron 2 91065 90793 ( 273 n); Pd: 0.000 (s: 0.86), Pa: 0.998 (s: 0.56) Exon 3 90792 90739 ( 54 n); cDNA 334 383 ( 50 n); score: 0.556 Intron 3 90738 90359 ( 380 n); Pd: 0.429 (s: 0.56), Pa: 0.171 (s: 0) Exon 4 90358 90347 ( 12 n); cDNA 384 395 ( 12 n); score: 0.833 Intron 4 90346 89793 ( 554 n); Pd: 0.000 (s: 0), Pa: 0.982 (s: 0) Exon 5 89792 89761 ( 32 n); cDNA 396 423 ( 28 n); score: 0.656 MATCH C08HBa0165B06.1- SGN-E253695- 0.767 360 0.667 C PGS_C08HBa0165B06.1-_SGN-E253695- (91809 91759,91276 91066,90792 90739,90358 90347,89792 89761) Alignment (genomic DNA sequence = upper lines): TACATGGATA CAATTAGAGC AGTTGT-TAC AAGGGTTCAG GAGAATGAAC ATGCCTGTGT 91751 || |||| || | || ||| | |||| || || || || | ||| ||| || TATATGGGTA -ATTTGGAG- A-TTGTATAA AAATATTAAG G-GAAAAAAC AT........ 141 CTCATTCTTG GAATCTATTC CATCTTATGA TGATTTGACA AACCAAGCTG GTTGTGACTT 91691 .......... .......... .......... .......... .......... .......... 141 TCTCCTGCAT ATTTTAATTG TCAATATCTT TGCTATATTA CAGTCTTTCA CAAAACATCA 91631 .......... .......... .......... .......... .......... .......... 141 CCTTTTTCCT TGCAGTACCT TCTAGCTTTC AGAAAATGGA ATATATGTGG ACTACTGATG 91571 .......... .......... .......... .......... .......... .......... 141 AAGTGCAGAC TGCTCGGATC TTATTTTACA TGCGAGTAAT TCCAACTTGC ATTGAATGTA 91511 .......... .......... .......... .......... .......... .......... 141 TACCAGCCTC TGTATTCCGC AAGGTTCTGG CTCCAACCAT GTTCCTGTAT CCTGCATCAG 91451 .......... .......... .......... .......... .......... .......... 141 ATGGTTAAGG GCCCGTTTGG ATGGGCTTAA TAAAAGCAGC TTTAAAAAAG TACTTTTGAA 91391 .......... .......... .......... .......... .......... .......... 141 AGTGCTGAAA CTTATTTTTA AAATAAGCAG TTATGCGTTT GGATAAAAGT GCTGAAGTTG 91331 .......... .......... .......... .......... .......... .......... 141 TTATGCCAAA CGTGAAAAGG AAAAAATGGA AAAAAGAGAT GTTAGGGTTA TATGGATAAT 91271 | ||| .......... .......... .......... .......... .......... ....AAAAAT 147 TTGGTCAACT TAAAACAGCT TATAAGCTAA AAAACAAAAA GCACCCCTAC CCCAGCTTTT 91211 ||||||||| |||||||||| |||||||||| |||| ||||| | | | || | ||| ATGGTCAACT TAAAACAGCT TATAAGCTAA AAAA-AAAAA G-----C-A- --CA-C-TTT 195 AGCTTTTGGC TTAAAATAAG TTTTTTTTAA CTTAAAATAA GTTATTTCGA GTATTGCCAA 91151 |||| |||||||||| ||||||||| |||||||||| | ||||| || |||||||||| ------TGGC TTAAAATAAG -TTTTTTTAA CTTAAAATAA GCTATTTTGA GTATTGCCAA 248 ACAGTTAAAT AAGTCAAAAA CCAGCTTTTA AGTCAGTTTG ACCAGCTTTT AAGCTAAGCC 91091 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ACATTTAAAT AAGTCAAAAA CCAGCTTTTA AGTCAGTTTG ACCAGCTTTT AAGCTGAGCC 308 AAATAGGCTC TAAATCTAGA AACAAATAGG ATAGTCAAAC CTGATTGAAT TTATAAAAAT 91031 ||| |||||| |||| || || | | AAACAGGCTC TAAAGCTCGA GATAG..... .......... .......... .......... 333 TTCCTTAATG CATTTAACCA GATACATGGG GCATCCAACT GGAAAATTGG CTAAAGCCTC 90971 .......... .......... .......... .......... .......... .......... 333 ACACTCGGTG TTTGTCGCTT TCATGTCCTC TGGTAAGGAT GCTGATCCAG ATGAAAGAGA 90911 .......... .......... .......... .......... .......... .......... 333 TACATTAAAG GAGCAACTTG TATTTTATTA TGTCAAGAGA TCTTTAGAGG TAATAAAAAC 90851 .......... .......... .......... .......... .......... .......... 333 TACCAAAGTT AATTTCTGTG ATGCTTGAAC TTGTTCTCTG ATTTAACTGA AAATTTAGGG 90791 | .......... .......... .......... .......... .......... ........TG 335 ATACCCTGGG ATTACTCCTT TTGAGGGAAT GGCTTCTGGA GTTGTTGCAC TGGTTAGACA 90731 | || || | || | | | || ||| | | || | ||| | || | | AAACTCTAAG ATGA-T-CAA TTAAGGAACT GG-TGTTGG- TTGTTTTTAG TA........ 383 TCTGCCTGCT GGAAGCCCGT CTATATTCTA TTGCATCCAC TGTCTCATTG AGAAGGCTGA 90671 .......... .......... .......... .......... .......... .......... 383 TAGCCTTTGT AGTTCAGTCG ATACTACTCC AGAAACTGAC TTGTGGAAGA GTTGGAATGG 90611 .......... .......... .......... .......... .......... .......... 383 AAAGCTGGAG CCTTTCAAGA TGTTGGATTT ACTTTTTCGT CTCCTTTCTC TTGTTGATAT 90551 .......... .......... .......... .......... .......... .......... 383 ACAGGTAAAA GTGGTAACAA TGTTTATCTT CAACTGGGCA ACCTAATGAT GTGCAGTTAC 90491 .......... .......... .......... .......... .......... .......... 383 AAGTTCAATC ATTAGAGAAC ACGTGCCTTC CATGGATATG AAAATATTCA ATATGTGTGA 90431 .......... .......... .......... .......... .......... .......... 383 TACGTCACTT TAATTGTTTT ACTTTCGTGT CTTCCTTTGT TAGAAAATTT GGGTAATTGG 90371 .......... .......... .......... .......... .......... .......... 383 TATAATTTGT AGGAGCTCTT TCTTGTTACA TAAAAGCTTT GGAAAATGGA TAGATGTTTC 90311 || ||||| ||| .......... ..GATCTCTT ACTT...... .......... .......... .......... 395 AACTATGAAA ATGCTGATTT GTCTTAGGTG TCCTAGCCCG ATATATGCCT ACTGTGCAAA 90251 .......... .......... .......... .......... .......... .......... 395 TATAATGCAC TTGACGTGGC TGATACTTTT TTTTGCCTCT CAGGTTCTGC CTAGTTTGAT 90191 .......... .......... .......... .......... .......... .......... 395 GAAGTCACTG GCACAGTTGG TCGTTACATT ACCACCAAGT GGCCAGGATA TCATTCTCAA 90131 .......... .......... .......... .......... .......... .......... 395 TGAATTATAT CAACATGTTG CAGAATCAGA TGATGTTACA CGGAAACCGA CAATGGTTTC 90071 .......... .......... .......... .......... .......... .......... 395 GTGGTTGCAG TCACTGTCTT ATCTTAGTTA TCAAAATACT AGCAAGAAAG CACCAAAAGT 90011 .......... .......... .......... .......... .......... .......... 395 GGCAGCAAAA GAACTACATG ATTCAATATC AGGAACTACA GACTCATTAA GCATGAATAA 89951 .......... .......... .......... .......... .......... .......... 395 AATCAGTGCA CGTCTGTAGA AGATTGAGGT ATACAATTCT CACTTAATTG TTGGTAATAT 89891 .......... .......... .......... .......... .......... .......... 395 TACATAAGAA TACATGTCCA CTGTTAATCA CTGGTCCCTT GAAATTTCAT CACATCACAC 89831 .......... .......... .......... .......... .......... .......... 395 ATGAATAAAA CAAACAATCG TGGACAATGG TTATGCAGGA TTCATGGATA CCAGAAATGT 89771 | |||| || ||| ||| .......... .......... .......... ........G- TTCA--AAT- GCAGGCATGA 413 GTAAGATGAG 89761 | |||| ||| GGAAGAGGAG 423 hqPGS_C08HBa0165B06.1-_SGN-E253695- (91276 91066,90792 90739) ******************************************************************************** EST sequence 120 -strand 618 n (File: SGN-E249253-) 1 GAAAAGGGAA AAATAGAAGA AAGAGAAGTT AGTGTTATAT GGGTAATTTG GAGATTGTAT 61 AAAAATATTA AGGGAAAAAA CATAAAAATA TGGTCAACTT AAAACAGCTT ATAAGCTAAA 121 AAAAAAAGGC ACACTTTTGG CTTAAAATAA GTTTTTTTAA CTTAAAATAA GCTATTTTGA 181 GTATTGCCAA ACATTTAAAT AAGTCAAAAA CCAGCTTTTA AGTCAGTTTG ACCAGCTTTT 241 AAGCTGAGCC AAACAGGCTC TAAAGCTCGA GATAGTGAAA CTCTAAGATG ATCAATTAAG 301 GAACTGGTGT TGGTTGTTTT TAGTAGATCT CTTACTTGTT CAAATGCAGG CATGAGGAAG 361 AGGAGTCCAG TTTGAAAGTA GTCAATTTGA AGCTCAAGAA TGTCCCATGG TGTCAACTCA 421 ATAATCTTAC AATTATCTGT ATGGTGCTGA CTTTTTCCCT CAGCTTTAAC CGTCCATTTT 481 GAAATGATGG ATACCTTGGA AGCCATAGCT TTCAATCACC TCTGTATTGG GTAAATCTGA 541 AGTTAAATCA GTGTGCTCAG CGGCGGAACA GCTTAATAAC CGGAAAAGTT GCCGGAAACG 601 GGACTTGAAC TGGTAACC Predicted gene structure (within gDNA segment 92779 to 86766): Exon 1 91273 91066 ( 208 n); cDNA 87 275 ( 189 n); score: 0.851 Intron 1 91065 90793 ( 273 n); Pd: 0.000 (s: 0.86), Pa: 0.998 (s: 0.56) Exon 2 90792 90739 ( 54 n); cDNA 276 325 ( 50 n); score: 0.556 Intron 2 90738 90359 ( 380 n); Pd: 0.429 (s: 0.56), Pa: 0.171 (s: 0) Exon 3 90358 90347 ( 12 n); cDNA 326 337 ( 12 n); score: 0.833 Intron 3 90346 89793 ( 554 n); Pd: 0.000 (s: 0), Pa: 0.982 (s: 0) Exon 4 89792 89761 ( 32 n); cDNA 338 365 ( 28 n); score: 0.656 MATCH C08HBa0165B06.1- SGN-E249253- 0.790 306 0.495 C PGS_C08HBa0165B06.1-_SGN-E249253- (91273 91066,90792 90739,90358 90347,89792 89761) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| |||| || || |||| | | || | AATATGGTCA ACTTAAAACA GCTTATAAGC TAAA-AA-AA AAAG----GC -A---CA-C- 134 TTTAGCTTTT GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAGTTATTT CGAGTATTGC 91154 || || |||||||||| |||| ||||| |||||||||| |||| ||||| ||||||||| TT------TT GGCTTAAAAT AAGT-TTTTT TAACTTAAAA TAAGCTATTT TGAGTATTGC 187 CAAACAGTTA AATAAGTCAA AAACCAGCTT TTAAGTCAGT TTGACCAGCT TTTAAGCTAA 91094 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CAAACATTTA AATAAGTCAA AAACCAGCTT TTAAGTCAGT TTGACCAGCT TTTAAGCTGA 247 GCCAAATAGG CTCTAAATCT AGAAACAAAT AGGATAGTCA AACCTGATTG AATTTATAAA 91034 |||||| ||| ||||||| || || | | GCCAAACAGG CTCTAAAGCT CGAGATAG.. .......... .......... .......... 275 AATTTCCTTA ATGCATTTAA CCAGATACAT GGGGCATCCA ACTGGAAAAT TGGCTAAAGC 90974 .......... .......... .......... .......... .......... .......... 275 CTCACACTCG GTGTTTGTCG CTTTCATGTC CTCTGGTAAG GATGCTGATC CAGATGAAAG 90914 .......... .......... .......... .......... .......... .......... 275 AGATACATTA AAGGAGCAAC TTGTATTTTA TTATGTCAAG AGATCTTTAG AGGTAATAAA 90854 .......... .......... .......... .......... .......... .......... 275 AACTACCAAA GTTAATTTCT GTGATGCTTG AACTTGTTCT CTGATTTAAC TGAAAATTTA 90794 .......... .......... .......... .......... .......... .......... 275 GGGATACCCT GGGATTACTC CTTTTGAGGG AATGGCTTCT GGAGTTGTTG CACTGGTTAG 90734 || || || ||| | | | || ||| | ||| | | || | || | | .TGAAACTCT AAGATGA-T- CAATTAAGGA ACTGG-TGTT GG-TTGTTTT TAGTA..... 325 ACATCTGCCT GCTGGAAGCC CGTCTATATT CTATTGCATC CACTGTCTCA TTGAGAAGGC 90674 .......... .......... .......... .......... .......... .......... 325 TGATAGCCTT TGTAGTTCAG TCGATACTAC TCCAGAAACT GACTTGTGGA AGAGTTGGAA 90614 .......... .......... .......... .......... .......... .......... 325 TGGAAAGCTG GAGCCTTTCA AGATGTTGGA TTTACTTTTT CGTCTCCTTT CTCTTGTTGA 90554 .......... .......... .......... .......... .......... .......... 325 TATACAGGTA AAAGTGGTAA CAATGTTTAT CTTCAACTGG GCAACCTAAT GATGTGCAGT 90494 .......... .......... .......... .......... .......... .......... 325 TACAAGTTCA ATCATTAGAG AACACGTGCC TTCCATGGAT ATGAAAATAT TCAATATGTG 90434 .......... .......... .......... .......... .......... .......... 325 TGATACGTCA CTTTAATTGT TTTACTTTCG TGTCTTCCTT TGTTAGAAAA TTTGGGTAAT 90374 .......... .......... .......... .......... .......... .......... 325 TGGTATAATT TGTAGGAGCT CTTTCTTGTT ACATAAAAGC TTTGGAAAAT GGATAGATGT 90314 || || ||| ||| .......... .....GATCT CTTACTT... .......... .......... .......... 337 TTCAACTATG AAAATGCTGA TTTGTCTTAG GTGTCCTAGC CCGATATATG CCTACTGTGC 90254 .......... .......... .......... .......... .......... .......... 337 AAATATAATG CACTTGACGT GGCTGATACT TTTTTTTGCC TCTCAGGTTC TGCCTAGTTT 90194 .......... .......... .......... .......... .......... .......... 337 GATGAAGTCA CTGGCACAGT TGGTCGTTAC ATTACCACCA AGTGGCCAGG ATATCATTCT 90134 .......... .......... .......... .......... .......... .......... 337 CAATGAATTA TATCAACATG TTGCAGAATC AGATGATGTT ACACGGAAAC CGACAATGGT 90074 .......... .......... .......... .......... .......... .......... 337 TTCGTGGTTG CAGTCACTGT CTTATCTTAG TTATCAAAAT ACTAGCAAGA AAGCACCAAA 90014 .......... .......... .......... .......... .......... .......... 337 AGTGGCAGCA AAAGAACTAC ATGATTCAAT ATCAGGAACT ACAGACTCAT TAAGCATGAA 89954 .......... .......... .......... .......... .......... .......... 337 TAAAATCAGT GCACGTCTGT AGAAGATTGA GGTATACAAT TCTCACTTAA TTGTTGGTAA 89894 .......... .......... .......... .......... .......... .......... 337 TATTACATAA GAATACATGT CCACTGTTAA TCACTGGTCC CTTGAAATTT CATCACATCA 89834 .......... .......... .......... .......... .......... .......... 337 CACATGAATA AAACAAACAA TCGTGGACAA TGGTTATGCA GGATTCATGG ATACCAGAAA 89774 | |||| || ||| | .......... .......... .......... .......... .G-TTCA--A AT-GCAGGCA 352 TGTGTAAGAT GAG 89761 || | |||| ||| TGAGGAAGAG GAG 365 hqPGS_C08HBa0165B06.1-_SGN-E249253- (91273 91066,90792 90739) ******************************************************************************** EST sequence 182 +strand 580 n (File: SGN-E204223+) 1 ATGGTCTTCT TTGGTTAGGA GGGCCAATAA AAATTGAAAT GAAAACAGGA AGGAAAGATA 61 GCAAGGAAAC TTACTTTTCA GAAGTTGAGA AGTACCTCCC TAATCACAAC GATTCAATCT 121 CATCTGTGCT TTCAAGATTT CAATCAATTG GTGTTGATAC TGAAGGAACT GTTGCTCTAC 181 TTGGTAATCA ACTCTCTAAA CTCTCGTTTA ATCATAAATT TTTTAAAAAT AATTAATTAT 241 ACAAAATTAT GTTTATTTTG ATCGAAAAAT TCATGTAGAG TTCATTCTTA GGGCCCGTTT 301 GGATGGACTT AGCTTTAAAA AAGTACTTTT AAAAGTTATG CATTTGGATA AAAGTGTTGA 361 AGTTGCTATG CCAAACGTGA AAATGGAAAA ATGGAAGAAA GAGATGTTAG AGTTATGTGG 421 ATAATTTGGA GATTGTATAA AAATATTAAG GGCAAAAAGA TAAAAATGTG GTCAACTTAA 481 AACAGCTTAT AAGCTAAAAA AAAAGCACCC CTACCCCAGC TTTTAACTTT TGGCTTAAAA 541 TAAGTTTTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA Predicted gene structure (within gDNA segment 97149 to 90494): Exon 1 96301 96290 ( 12 n); cDNA 210 221 ( 12 n); score: 0.583 Intron 1 96289 95104 (1186 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.70) Exon 2 95103 95040 ( 64 n); cDNA 222 283 ( 62 n); score: 0.656 Intron 2 95039 91451 (3589 n); Pd: 0.000 (s: 0.60), Pa: 0.000 (s: 0) Exon 3 91450 91422 ( 29 n); cDNA 284 311 ( 28 n); score: 0.862 Intron 3 91421 91388 ( 34 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.68) Exon 4 91387 91231 ( 157 n); cDNA 312 466 ( 155 n); score: 0.755 MATCH C08HBa0165B06.1- SGN-E204223+ 0.726 262 0.452 C PGS_C08HBa0165B06.1-_SGN-E204223+ (96301 96290,95103 95040,91450 91422,91387 91231) Alignment (genomic DNA sequence = upper lines): AAATGTAAAT CCATATCCAT TTGTACTAAA GTTTGAGTAG CTAAGCTCAA GATTTTTAAA 96242 || ||||| AATCATAAAT TT........ .......... .......... .......... .......... 221 ACCAAGTTCA ATTGAACATT TTTCACCTCC ATCTGACACT GCACAAAAAT AATAACAAAA 96182 .......... .......... .......... .......... .......... .......... 221 AAGAAAAAAG AATGAGATAA TAAAATAGTC ATTTTTGGCC TAAAATATAC ACACCAAAAG 96122 .......... .......... .......... .......... .......... .......... 221 AAACTAGTAC CATTGTAGCA GACTTTTTTG GTAGCAATAC TCTTGGGAGG TGAGATTTTG 96062 .......... .......... .......... .......... .......... .......... 221 AGTTCCATTT GCAGATGAAA TATATATATT TTTTGTTTAT TTTAATAATA TTATCACTAC 96002 .......... .......... .......... .......... .......... .......... 221 TAATTGTGTG TTGCTCTCAT ATTGTGAGAT GTGCAAATAG GATTCAGATA AAAACAATGA 95942 .......... .......... .......... .......... .......... .......... 221 AATACTGGCA TAGACAGCAA CTCTTCTGAC ATAGTCAGAA AATTTTGGCA GCTCCTGTTT 95882 .......... .......... .......... .......... .......... .......... 221 TTGAATGGTA GGGCTTTTTT TTTTTTTTGG TTCGGTAGCT ATATTGAAGC ATGATTAAAT 95822 .......... .......... .......... .......... .......... .......... 221 TTATATTTGT GTATTGTAGA GTTCGTTTCT AGGAGGCAAT ACTTTTAATA GTGTTTTTTC 95762 .......... .......... .......... .......... .......... .......... 221 ATTTTCAAGG ACTTGAATTC GAAATTCTAA TTAAGAGTGA AATGATAGTG AATTGTTCCA 95702 .......... .......... .......... .......... .......... .......... 221 CCACAAACTT TGCACTTAGA TTGTGTATAG TCTAAGAAAA TGATAACAAC ATCATACCTA 95642 .......... .......... .......... .......... .......... .......... 221 GTGAAAATCC TGTATAGGCA ATCTTTATTC CATTTAGTAG GATTTAGGAA GAGTATAGTA 95582 .......... .......... .......... .......... .......... .......... 221 CACGTGAATC TTATCACTAA TTTCTGGAGG TTGAGAAACT GTTTCGTAAC TCACTATAAC 95522 .......... .......... .......... .......... .......... .......... 221 AAAAACTAGA AAAATGAGAA TTTACATTTT TTTTTTTCGT GGAACTTACT ATACTTTTCG 95462 .......... .......... .......... .......... .......... .......... 221 TATTAACTAT TATGCTTTAT TTATTATCTT TTTCTTTCCT ACTTGAATTT AATACACTTA 95402 .......... .......... .......... .......... .......... .......... 221 ATCTGATGGT ATTTTGAAAT CAATTTTCTT ACTTTCACAA AATAGTGATA AAATTTATGT 95342 .......... .......... .......... .......... .......... .......... 221 ATATTTGACT CTCCCCAGAC TTCACTTAGT GGAATTCCAT GTAATATGTT ACTATTGTGA 95282 .......... .......... .......... .......... .......... .......... 221 TGGTGAATTA TGAAATATGA ACAAATTTAT TAGCATTTCT CCCCTAATTT TTCTCTGTTG 95222 .......... .......... .......... .......... .......... .......... 221 AAAATTTAAC TTGTGAAACA TTAATCTGGA CCAATCCAAA GTTAAAGAAA GTATATCGGC 95162 .......... .......... .......... .......... .......... .......... 221 ATACAAATTT TGGTTAATTG ATAATTTGAA GTCACAAATT TGAAATCTAA TGCATAATTT 95102 || .......... .......... .......... .......... .......... ........TT 223 TTAAAAAAAT TAAATATGAA ATTTTAAATT TAATCTATAA TTAAAAAATC CAGACAGACT 95042 | |||| ||| ||| ||| | | ||| || | || | | | | |||||| || ||| | TAAAAATAAT TAATTATACA AAATTATGTT T-AT-TTTGA TCGAAAAATT CATGTAGAGT 281 ATTAATTAGA AATTTTTGAA TTTACCCAAC TTATGACCAC CGCTACTTAC GATAGTCAAA 94982 TC........ .......... .......... .......... .......... .......... 283 CACAATCGTT TTAGTTTTAT TTACCTACCT TTTAATATTA GAACTATTTT TAACACAAAA 94922 .......... .......... .......... .......... .......... .......... 283 TTATTAGATT TCACGTTATT ATTTATTATT ACTCCAAAGT ATTTTGTTAT TTTCTCACTT 94862 .......... .......... .......... .......... .......... .......... 283 AAAAATGGAT AATGAATTTC TTGAAAATTG TGTCAACTAG AAAAAATAAA AGTTGCTCTT 94802 .......... .......... .......... .......... .......... .......... 283 TACGTCACCA ATTTTCTTTT TTTCACAAAA TTGCACAGAA ACTGTTAAAT TGGACGAAAT 94742 .......... .......... .......... .......... .......... .......... 283 TGCTCCAAAT TGTGTCTTCT TGTAATTAAA GATTGAAGAT TCCATTTTTT CACCTAAAAT 94682 .......... .......... .......... .......... .......... .......... 283 TATTTAAAAA AACAATTTTT TTTGAATCTT GGTGTTTATG GCCTGGGACT CAAGTGATAG 94622 .......... .......... .......... .......... .......... .......... 283 CTTGTAGAAG AGGTAAAGTT TCGATTTTTT CTATGTGGGT GTTTGTGTTT TTCCATGTTT 94562 .......... .......... .......... .......... .......... .......... 283 TACTTATTGT GGTCGATTAT GTTTCATACA TGTGTATTGA ATTGCTGTTA GATGGTGAAA 94502 .......... .......... .......... .......... .......... .......... 283 TATAAGTGTT TCATCTGCTG AACGCTTACT GTTCGACGAA AGTCCTAAGA GAAGTTAATG 94442 .......... .......... .......... .......... .......... .......... 283 TTGTTAAAAA GTACATATTT TTTGCTTTTT GTGTCGTTTG TGACACTAAT ATTTGCCGAA 94382 .......... .......... .......... .......... .......... .......... 283 CTACTGCTCT CTTTTTATTG GTTTGCCCTT TACGTTGAAA CTAAGCTCCC GTTTGGTCAT 94322 .......... .......... .......... .......... .......... .......... 283 CAATTTTGAA GTTGAAACTC GAAAATTTGA GCTTTTTTGA ACTTGTGATT TTTGGTATAT 94262 .......... .......... .......... .......... .......... .......... 283 GAAGTTGTGT TTGGACATGT ATTTTGCTTG GAAAAAGTTT CTAAGTTTTG TGAGTGGATT 94202 .......... .......... .......... .......... .......... .......... 283 GTGGAAGTCC CAATTGGGAA TTGATTTTTT TGATCACATT TCATGCAAAT AAATATTTGA 94142 .......... .......... .......... .......... .......... .......... 283 GGGTAAACTT TCAAAAGCTA TGACCCTGAC GCTGGCTAAG ATTTTAGAAA TTTTACTCGA 94082 .......... .......... .......... .......... .......... .......... 283 CTCTACTATT CCATTTCAAG TTTCCCTTGT TTTAGCTTGA ATTTCTGGTT GATTACAGAA 94022 .......... .......... .......... .......... .......... .......... 283 GCCTTAAGTA GTCAGTGTTA CTTTCTAACG AAATGTGAAG GATTTCCATT CTCGCTCTCT 93962 .......... .......... .......... .......... .......... .......... 283 CATGCGGGGC TAATTGACTT ATTGAATGAC TCCTCTCTTT ACCGTCAAGT GGATTTCAGC 93902 .......... .......... .......... .......... .......... .......... 283 TCTTTCTTTT TATTACGGGA AAGAAATTTA GGAAATCTTC CTACTTGTCA CGAGACACTA 93842 .......... .......... .......... .......... .......... .......... 283 TTGTTTGTTG CATATTGAAT TTGAAATTGT TAAGGAAGGA ATCCTGCCCT TATTTTTGTT 93782 .......... .......... .......... .......... .......... .......... 283 TTAGTATAAT GTCCTTTGTA TCCTCTTTCC TTTGATCTGC TCAGAAAACT GGGGAAAAAT 93722 .......... .......... .......... .......... .......... .......... 283 GTTATCTATA ACTTTCCTCA TTATTTTTAA AAGGTAGCTA ATTCCATTGA TTAATAATTT 93662 .......... .......... .......... .......... .......... .......... 283 TATCAAGATA CTTGAATATA GCTTACCCCC TCCGCTCTTT TATCACAGCT TATAAATGGG 93602 .......... .......... .......... .......... .......... .......... 283 ATAATCCTTT TGAAAGCAAA GCATTTACTA CGTTCACTGT TGTGATAAAT ATATGTAGTT 93542 .......... .......... .......... .......... .......... .......... 283 CAGGTCGTGG ATAACTTAAG TCACCTAAAT CTTGTACTTA ATTTGGATCA AATTTTGTAG 93482 .......... .......... .......... .......... .......... .......... 283 TGATTAAGGT TTATTGATGA GACTTCGGTA GAAAATTAGT GGGGTCTTAG CTATATCCAT 93422 .......... .......... .......... .......... .......... .......... 283 TATGCTTTAG GGAATTAGCA GTCTTTTTTA ATTTATTGCT TGCAATGTTT GATCTTGCAG 93362 .......... .......... .......... .......... .......... .......... 283 TTGCATAATT TACATAATGG CAAAGAAACC TGAATCTGTA TTCCTTGAAG AATGGCTATG 93302 .......... .......... .......... .......... .......... .......... 283 CAGAATCAGT GGCACCCAGG AGAACGTGAC ACTGAAACAT CCTTCTTCGG CATCAGCCCA 93242 .......... .......... .......... .......... .......... .......... 283 AGCTATCATC CAAGCATGGG CTGATCTTAG GGACTCCCTT CAAAATCAAG CATTCCACTC 93182 .......... .......... .......... .......... .......... .......... 283 AAATCACCTC CAATCCCTAA GGACCCTCGT TGATGCTCAG TTCTCTCTCT ATATTGCTGA 93122 .......... .......... .......... .......... .......... .......... 283 TCCACAAACA AAAATTCTGT TGTCTATTTT GTCCTCGCAA AAAGTCTCCC TTCCACAGGA 93062 .......... .......... .......... .......... .......... .......... 283 ATCTTATCCT TTATTTGTCA GGCTTCTATA CATTTGGGTT CGGAAATCAT TTAGACATTC 93002 .......... .......... .......... .......... .......... .......... 283 TCCTGGGGTC ATTGATTCAG CAGTTGAGGT CCTTTTGCAC CTTTTCTCTG GGCATATTCA 92942 .......... .......... .......... .......... .......... .......... 283 TTCAAACAAA AGCTTATCTT TCTTCTCTGA AGGTGTTCTT CTCCTTGGTG CTCTTTCTTT 92882 .......... .......... .......... .......... .......... .......... 283 TGTACCTTCA GCATCCGAAA AATCTAAAAC CGTTTGCTTG AAATTGCTCT GCCAGCTTCT 92822 .......... .......... .......... .......... .......... .......... 283 TGAAGAAGAC TATAGATTGA TCCATTTGTC TGAGAGGACA ATCCCGAATG TTCTTGCAGG 92762 .......... .......... .......... .......... .......... .......... 283 AATTGGCTAT GCTCTATCTT CTTCTGTGAA CATATATTTT GTTAGAGTTC TCAGTTGTTT 92702 .......... .......... .......... .......... .......... .......... 283 AATGGAATTG TGGGATAAAA GCGACGGCCC TTTTGCTAGT TTGTCTAATG GGCTCATGAT 92642 .......... .......... .......... .......... .......... .......... 283 ACTGCATCTG ATTGAGTGGA GTTTCTCAAA TTTTATCAAT TCTAACTCCA CAGACAAGAT 92582 .......... .......... .......... .......... .......... .......... 283 TGATCTTTTC AGTAGAGAGG TATTGAATAA CACACGACCA GCATTCTCTT TGTTTGCTGT 92522 .......... .......... .......... .......... .......... .......... 283 AGTCATGGCT GCTGCTGGAG TACTGAGAGT CATCAATAGA TCTGAACAGA AAGCACTAAC 92462 .......... .......... .......... .......... .......... .......... 283 TGACCTTAAG ATTTCTGTTG AGGAACGAAT CGAGACCATT GCATGTGGTT TAGTTTCTAG 92402 .......... .......... .......... .......... .......... .......... 283 TGCTGGAGAT GCTGATTATG CTACAATGGA GCCAAGAAAC TCCTTTCTGT TACAGTGTAT 92342 .......... .......... .......... .......... .......... .......... 283 ATCATTAGCT TTATCTAAAA GTGGACCATT TTCTTACCAA CCTCATGTGT TTCTATGCCT 92282 .......... .......... .......... .......... .......... .......... 283 TGCTACAGCT TTATTGACTG AAATCTTCCC CTTGCCACAC ATTTATGTAA AAATCCAAGA 92222 .......... .......... .......... .......... .......... .......... 283 ATCACCTTCT GGCAACTTGG TGGGATTAGT TCTCAATGAC GTGCAGCAAC ACCTAGACAG 92162 .......... .......... .......... .......... .......... .......... 283 CATTATTTTT AAGGAAGCAG GGGCCATAAC TGGTGTTTTT TGCAATCAGT ATGTCATGGC 92102 .......... .......... .......... .......... .......... .......... 283 TGATGAGGAA AACCGAAGTG CCGTAGAGGA TATCATATGG AATTACTGTC GGGATGTCTA 92042 .......... .......... .......... .......... .......... .......... 283 TATGTGGCAT CGGAAGGTTG CTTTGATGCT TGGAGGTAGG GAGGAAGCGC TGTTAGGGAA 91982 .......... .......... .......... .......... .......... .......... 283 TCTGGAAAAA ATTGCTGAAT CTGCTTTTCT CATGGTTGTG GTCTTTGCCT TAGCAGTAAC 91922 .......... .......... .......... .......... .......... .......... 283 AAAGCAAAAG TTAAGTTTAA GTGCTCCCCA AGAAATTCAA ATGAGACTTT CAGTGAGGAT 91862 .......... .......... .......... .......... .......... .......... 283 ATTGGTTGCA TTTTCTTGTA TGGAATATTT CCGCAGAATG CGTTTGCCAG AGTACATGGA 91802 .......... .......... .......... .......... .......... .......... 283 TACAATTAGA GCAGTTGTTA CAAGGGTTCA GGAGAATGAA CATGCCTGTG TCTCATTCTT 91742 .......... .......... .......... .......... .......... .......... 283 GGAATCTATT CCATCTTATG ATGATTTGAC AAACCAAGCT GGTTGTGACT TTCTCCTGCA 91682 .......... .......... .......... .......... .......... .......... 283 TATTTTAATT GTCAATATCT TTGCTATATT ACAGTCTTTC ACAAAACATC ACCTTTTTCC 91622 .......... .......... .......... .......... .......... .......... 283 TTGCAGTACC TTCTAGCTTT CAGAAAATGG AATATATGTG GACTACTGAT GAAGTGCAGA 91562 .......... .......... .......... .......... .......... .......... 283 CTGCTCGGAT CTTATTTTAC ATGCGAGTAA TTCCAACTTG CATTGAATGT ATACCAGCCT 91502 .......... .......... .......... .......... .......... .......... 283 CTGTATTCCG CAAGGTTCTG GCTCCAACCA TGTTCCTGTA TCCTGCATCA GATGGTTAAG 91442 || || || .......... .......... .......... .......... .......... .ATTCTT-AG 291 GGCCCGTTTG GATGGGCTTA ATAAAAGCAG CTTTAAAAAA GTACTTTTGA AAGTGCTGAA 91382 |||||||||| ||||| |||| ||| | GGCCCGTTTG GATGGACTTA .......... .......... .......... ....GCTTTA 317 ACTTATTTTT AAAATAAGCA GTTATGCGTT TGGATAAAAG TGCTGAAGTT GTTATGCCAA 91322 | | | | ||| | ||||||| || |||||||||| || ||||||| | |||||||| AAAAAGTACT --TTTAA-AA GTTATGCATT TGGATAAAAG TGTTGAAGTT GCTATGCCAA 374 ACGTGAAAAG GAAAAAATGG AAAAAAGAGA TGTTAGGGTT ATATGGATAA TTTGGTCAAC 91262 ||||||||| | |||||||| || ||||||| |||||| ||| || ||||||| ||||| | ACGTGAAAAT GGAAAAATGG AAGAAAGAGA TGTTAGAGTT ATGTGGATAA TTTGGAGATT 434 TTA-AAACAG CTTATAAGCT AAAAAACAAA AA 91231 || ||| | ||| || |||| | ||| || GTATAAAAAT ATTAAGGGCA AAAAGATAAA AA 466 hqPGS_C08HBa0165B06.1-_SGN-E204223+ (91450 91422,91387 91231) ******************************************************************************** EST sequence 337 +strand 666 n (File: SGN-E237992+) 1 ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AACTAAACAA GCTCTTAGAC AATAATTTTT TCTTTTACGT ATCTCCACTT AAATAGTAGA 301 CATTATAAGT TTGAGGCAGT TCTCAACCAT GTAACCTAAG TCACAAATTT ATGAGTTTCC 361 AATTTATGCA CTTTGGTTAA AAAAATAACT ATTCATATAA ATTTCTTTTT TTATTATTTT 421 AATCGAAAAA AATCATCTAG AGTCGATTGT TAGAAATAGT TGCAACTTGC AACTATGTAA 481 CACAGAGATA ATAATTTTGT CTTTTTACGT ATCTCCACTT AAATACCAGA CATCACTAAC 541 TTAAGTCACA AACCCCTTGA CCTTCCCAAT TATATTTAAG CACTAGAAAA CTTATATATA 601 AAAAATCGAA TTTAACGCTT AATATTTATC AACTAACACC TAATTGTCTT TTGTTTCATT 661 TGGAAA Predicted gene structure (within gDNA segment 92519 to 83804): Exon 1 91273 91070 ( 204 n); cDNA 62 265 ( 204 n); score: 0.860 Intron 1 91069 85855 (5215 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0) Exon 2 85854 85841 ( 14 n); cDNA 266 278 ( 13 n); score: 0.714 Intron 2 85840 85034 ( 807 n); Pd: 0.825 (s: 0), Pa: 0.907 (s: 0) Exon 3 85033 85001 ( 33 n); cDNA 279 309 ( 31 n); score: 0.606 MATCH C08HBa0165B06.1- SGN-E237992+ 0.860 251 0.377 C PGS_C08HBa0165B06.1-_SGN-E237992+ (91273 91070,85854 85841,85033 85001) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| |||| | || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAAA--A-AA AAAGCACCCC TACCCCAGCT 118 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 178 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 238 TAAGCCAAAT AGGCTCTAAA TCTAGAAACA AATAGGATAG TCAAACCTGA TTGAATTTAT 91037 | | | ||| | ||||| | | | || TGAACTAAAC AAGCTCTTAG ACAATAA... .......... .......... .......... 265 AAAAATTTCC TTAATGCATT TAACCAGATA CATGGGGCAT CCAACTGGAA AATTGGCTAA 90977 .......... .......... .......... .......... .......... .......... 265 AGCCTCACAC TCGGTGTTTG TCGCTTTCAT GTCCTCTGGT AAGGATGCTG ATCCAGATGA 90917 .......... .......... .......... .......... .......... .......... 265 AAGAGATACA TTAAAGGAGC AACTTGTATT TTATTATGTC AAGAGATCTT TAGAGGTAAT 90857 .......... .......... .......... .......... .......... .......... 265 AAAAACTACC AAAGTTAATT TCTGTGATGC TTGAACTTGT TCTCTGATTT AACTGAAAAT 90797 .......... .......... .......... .......... .......... .......... 265 TTAGGGATAC CCTGGGATTA CTCCTTTTGA GGGAATGGCT TCTGGAGTTG TTGCACTGGT 90737 .......... .......... .......... .......... .......... .......... 265 TAGACATCTG CCTGCTGGAA GCCCGTCTAT ATTCTATTGC ATCCACTGTC TCATTGAGAA 90677 .......... .......... .......... .......... .......... .......... 265 GGCTGATAGC CTTTGTAGTT CAGTCGATAC TACTCCAGAA ACTGACTTGT GGAAGAGTTG 90617 .......... .......... .......... .......... .......... .......... 265 GAATGGAAAG CTGGAGCCTT TCAAGATGTT GGATTTACTT TTTCGTCTCC TTTCTCTTGT 90557 .......... .......... .......... .......... .......... .......... 265 TGATATACAG GTAAAAGTGG TAACAATGTT TATCTTCAAC TGGGCAACCT AATGATGTGC 90497 .......... .......... .......... .......... .......... .......... 265 AGTTACAAGT TCAATCATTA GAGAACACGT GCCTTCCATG GATATGAAAA TATTCAATAT 90437 .......... .......... .......... .......... .......... .......... 265 GTGTGATACG TCACTTTAAT TGTTTTACTT TCGTGTCTTC CTTTGTTAGA AAATTTGGGT 90377 .......... .......... .......... .......... .......... .......... 265 AATTGGTATA ATTTGTAGGA GCTCTTTCTT GTTACATAAA AGCTTTGGAA AATGGATAGA 90317 .......... .......... .......... .......... .......... .......... 265 TGTTTCAACT ATGAAAATGC TGATTTGTCT TAGGTGTCCT AGCCCGATAT ATGCCTACTG 90257 .......... .......... .......... .......... .......... .......... 265 TGCAAATATA ATGCACTTGA CGTGGCTGAT ACTTTTTTTT GCCTCTCAGG TTCTGCCTAG 90197 .......... .......... .......... .......... .......... .......... 265 TTTGATGAAG TCACTGGCAC AGTTGGTCGT TACATTACCA CCAAGTGGCC AGGATATCAT 90137 .......... .......... .......... .......... .......... .......... 265 TCTCAATGAA TTATATCAAC ATGTTGCAGA ATCAGATGAT GTTACACGGA AACCGACAAT 90077 .......... .......... .......... .......... .......... .......... 265 GGTTTCGTGG TTGCAGTCAC TGTCTTATCT TAGTTATCAA AATACTAGCA AGAAAGCACC 90017 .......... .......... .......... .......... .......... .......... 265 AAAAGTGGCA GCAAAAGAAC TACATGATTC AATATCAGGA ACTACAGACT CATTAAGCAT 89957 .......... .......... .......... .......... .......... .......... 265 GAATAAAATC AGTGCACGTC TGTAGAAGAT TGAGGTATAC AATTCTCACT TAATTGTTGG 89897 .......... .......... .......... .......... .......... .......... 265 TAATATTACA TAAGAATACA TGTCCACTGT TAATCACTGG TCCCTTGAAA TTTCATCACA 89837 .......... .......... .......... .......... .......... .......... 265 TCACACATGA ATAAAACAAA CAATCGTGGA CAATGGTTAT GCAGGATTCA TGGATACCAG 89777 .......... .......... .......... .......... .......... .......... 265 AAATGTGTAA GATGAGGTTA ATGCTGAGAT TGGTGCTTCT TTAATCTGAT GAGAAAATGT 89717 .......... .......... .......... .......... .......... .......... 265 TCATTGTTTG GACTGCATTT GACTTGCAAT TCTGTGCATA AAGGAATGTT AGGTTTTATT 89657 .......... .......... .......... .......... .......... .......... 265 GCATTGTTGT TTATAAATAA ACTTGTATTA CAAAGGGAGC AATTGAGGAG AATTCTGAAA 89597 .......... .......... .......... .......... .......... .......... 265 GACTTCTCTT CTATTTATCA AGAACTGATG TGACAAGTCA CAAGTACTTG CAATTATAAA 89537 .......... .......... .......... .......... .......... .......... 265 TGTCACACAG GAGTGAGGAC CATGAATTGG CTTTCTGGTG TTATATCCCA CATATTTCCG 89477 .......... .......... .......... .......... .......... .......... 265 TGTCTATGAT TTCTGGATTC AATTTTGAAG TTTCTTCGCA GAATTATTAG GATCTGTTGC 89417 .......... .......... .......... .......... .......... .......... 265 TAGTAATCCA GGGCAAAATT CAACATCCAA CGCCAAGGGG TGAGTTCTCA CTTCCAAGTG 89357 .......... .......... .......... .......... .......... .......... 265 CTGCCTCCAA AATTGGTTTG TGGATAGCCA TAAACCTGTA TGGTGTAAAA TATGTTGGCT 89297 .......... .......... .......... .......... .......... .......... 265 TAATGTCTGT ATCCTTTGAG ATTTACCATT TGTTCATGAA GACTTGGGTC TGCTTTGAGA 89237 .......... .......... .......... .......... .......... .......... 265 TGGTACCGAC ACAAACTTCA TCAGATTCTG TTCAACAAGC CAAGAAGAAG TATGATGCAG 89177 .......... .......... .......... .......... .......... .......... 265 GGTGAAGTTG CATTTTCTTT TTATGCCAAG CTTCTGGCTG AGGAAATTGT GCTTTCCATA 89117 .......... .......... .......... .......... .......... .......... 265 TCTTGCTCTC ACTCACTTTA TCGAGCTTCC CTCATCTCAG CTTGTTCCTG CTTTACTTGG 89057 .......... .......... .......... .......... .......... .......... 265 TATTTATGCC GAATTGTGAA GCAACTCTGC CACTGCTCAT CCTATACCAT ATCATGATGC 88997 .......... .......... .......... .......... .......... .......... 265 CCCTTCCTCC AACGAACAAA TGCTGGAAAA GATTGAAAAT GTTGTAACAT AGACATTATA 88937 .......... .......... .......... .......... .......... .......... 265 CAACTTCTTG ACTATACAGT TATATGATTG ATTATACTGA ATTACAACTA TTCTGTTAGC 88877 .......... .......... .......... .......... .......... .......... 265 ATAAATGGTC AAGAAACACT GTGAAGTGTT CTTCCCTCAG TTCACTCTTC TAGTAGGACT 88817 .......... .......... .......... .......... .......... .......... 265 GGATACTTCC CAGAGATGTA TATTTAGCTG CCTTCCCCTT GGTGTATGTT TGAGCTTGAA 88757 .......... .......... .......... .......... .......... .......... 265 TAAAATGCTC CTTTACTGAA TTTAGTGGTT TTGACTCATA TTTTTGTTCT GATAAAGTTA 88697 .......... .......... .......... .......... .......... .......... 265 AGATCTTTCA TTCACTACAT CAAGTAGATG CATAGTTGCA AGGAAATTAA AAAAGCATTA 88637 .......... .......... .......... .......... .......... .......... 265 ACAGAAGTAC AAATGAATCT CTTTTTAGTG TGTTTTGGGG CGAGCTTTTT TATGTCGTTG 88577 .......... .......... .......... .......... .......... .......... 265 ATAACTAATA TGAGACGGGG TGAGTAAATG AGTAGAAAAT GCAAAAGAGT ATTGTTTTTC 88517 .......... .......... .......... .......... .......... .......... 265 GTCTTTTCGA TTTTATTATT ATACTAATAA AACATTCCAC AAGGGAGTAG TTTGCCAATA 88457 .......... .......... .......... .......... .......... .......... 265 GTGCTGGAAA ATGAGAGTAA CAGTGCCACG TTTTGGACTT CCATTCTTGA AACCTCTCTA 88397 .......... .......... .......... .......... .......... .......... 265 TGAATTCCCC TTTTCCTCTT CTTCTTCAAA CCTTTGGCCC AGAAATTGTT CTGGAAGCTT 88337 .......... .......... .......... .......... .......... .......... 265 CTCTGTAAAA ATGTCAACAA CCCCACCTTC TCAAATCGCT GACATCATCA ATCTCCCCAC 88277 .......... .......... .......... .......... .......... .......... 265 CCAACTCGAC CAACCGGTTT CTGTTGTCGC TGCTCCCGGC GTCTCCGATA CTCACTTCAG 88217 .......... .......... .......... .......... .......... .......... 265 GCAAATCCCT CAACTTTTTA TTTCATTTGC GATTCTATTT TTAGCTATCA ATTTACCCAA 88157 .......... .......... .......... .......... .......... .......... 265 TTCTTACTTA ATAGGGCATT TGTTGTGTGG GTTTTATAAG TTTTTCATGA TTTTTTAGAA 88097 .......... .......... .......... .......... .......... .......... 265 AAAAAAAAGA AGCAGCCTTT TCTATGATAA AGATTAAGCA ATTTTCTTGG CATGGATCCA 88037 .......... .......... .......... .......... .......... .......... 265 TTTGGATATA CCTCAACATG TTATTCTTTG TTTTCTTTTA CTTATTCGGG TTCTACTTTC 87977 .......... .......... .......... .......... .......... .......... 265 ATCTGTCAAT TTAAGTAATT CACACTTGAT TCTTGTTATG TCCTTTTTTT CTTTTTGGGG 87917 .......... .......... .......... .......... .......... .......... 265 TTCAAGTTTT AGCTTTCAGT TACGTAATTC ACTAGTATGC CATTTGAGGT GAGGTTGTAG 87857 .......... .......... .......... .......... .......... .......... 265 AAGTAAAGAT TTTTAGTTAT GTTAAAGATT AAACATTCTC TTGGGATGGC TTTGGATTAT 87797 .......... .......... .......... .......... .......... .......... 265 GTGGGCTGTT TGGATGCCAT TTGAGGTGAG GATTGTGCAT GATTTTCAGA AAAGGAAGCA 87737 .......... .......... .......... .......... .......... .......... 265 TTTTTATGTT AAAGGATGGT TTGAGTGAAT TGTCTGTTTT CTTGTAGGAA TGCTATTGAA 87677 .......... .......... .......... .......... .......... .......... 265 TCCTCATTGT TCAAACAGTG GTTAAAGAAC ATACAAACTG AAACAGGACT GCTGGCTAAT 87617 .......... .......... .......... .......... .......... .......... 265 GGAGCGCTGT CTTTAAAACA AGTTCTTATC CAGGTTTCTA TCTCAAGCTG TTCTGCTAAA 87557 .......... .......... .......... .......... .......... .......... 265 CTATGAAGAT AGTAACCTTT ACATGGTCAG TAGTTACAAT GAAATATATT GTTGGCTAAT 87497 .......... .......... .......... .......... .......... .......... 265 GGGACCATTA GAACACAAAT TGAGTTGCTT GAACCCTTCT AAATTTTTTC CACATTGGAC 87437 .......... .......... .......... .......... .......... .......... 265 AATTGGAGGA AAATGGTCTG TCTTCTGATC ATAACTGATG CTGAGGCTCT TAATTATATC 87377 .......... .......... .......... .......... .......... .......... 265 TTTATTTAGT ATGTTTTGTC CTAACATTTA TCAAAAGAAT GGATATCTAG GTTGATTGTG 87317 .......... .......... .......... .......... .......... .......... 265 CACTTTATGC TCCTTAAAGA TTCCTATGCT TCCCTAACAT AGTTGTCAGT CGTGCTCCCT 87257 .......... .......... .......... .......... .......... .......... 265 CCTAAAGAGG ATAAAAAGGA AGTCTTCTTG ATGTACGTGT CTGAATTTTT GGAATGATGT 87197 .......... .......... .......... .......... .......... .......... 265 TAACTCGCAC TATCAGCGAC CAAGAGTCCA AGACATAGTG ACTATCACAG GATTTGAAAC 87137 .......... .......... .......... .......... .......... .......... 265 TGCTTTTGGT CCTGCTACCG CAAACATTAA GTTTGCTTTA CAGCTGACAT TCCTTTTTAT 87077 .......... .......... .......... .......... .......... .......... 265 GTGTTGGAGC AGGGTGTAGA TATGTTTGGA GAGCGTTTGG GGTTTCTAAA ATTCAAAGCA 87017 .......... .......... .......... .......... .......... .......... 265 GATATTATTG ATAAGGAAAC GGGTCAAAAG GTATCTGATT AGAATCTCTC CATCCCATTG 86957 .......... .......... .......... .......... .......... .......... 265 GATATGTAAT TCATTCAGCC GGACTATGAA TAGCTTCTCT TAAAGCTGTG TCCTCAATTT 86897 .......... .......... .......... .......... .......... .......... 265 ATTTTGCTTT GGTTTTTTTT CCTTGTACCT TAGAGCATTG AACAATACAG TACTCGTGAC 86837 .......... .......... .......... .......... .......... .......... 265 ATAGCTCGAC AATATTAGCA TGACAATGAT GTATTACTTC CATTTTCCTT TTTCCTAGCT 86777 .......... .......... .......... .......... .......... .......... 265 TATCCTTGGT TGCAACAAGG GAAACTTCTT TCCTGTCACT ATCACCTCTT TTGTGTCTAG 86717 .......... .......... .......... .......... .......... .......... 265 GTTCCTGGTA TTGTCTTCGC ACGGGGTCCA GCTGTTGCAG TTCTAATCCT TTTGGATTAT 86657 .......... .......... .......... .......... .......... .......... 265 GAGGGTGAGA CATATGCTGT GCTTACGGAA CAGGTAGGTC TTCCAACTGT CAACTCCTCC 86597 .......... .......... .......... .......... .......... .......... 265 ATTTTTATAA CGTCGAAAAA TATCTCACAG TACAGATAAT ATGAGGAAAT TTATGAAAGT 86537 .......... .......... .......... .......... .......... .......... 265 TTTCTGTCCC TTTTACTGTT TAAACTCTAA AATACATTCA ACCTGTTTGG AAGGTTAGGG 86477 .......... .......... .......... .......... .......... .......... 265 TCCCAGTTGG GAGGCTAATT TTGGAATTGC CAGCAGGAAT GTTGGATGAT GACCAAGGCG 86417 .......... .......... .......... .......... .......... .......... 265 ACTTTGCTGG AACAGCAGTT CGAGAAGTCT CTCTCTCCCT TTCTATCAAA GCACTATCCC 86357 .......... .......... .......... .......... .......... .......... 265 CTTCTCAAAA TTTTCTCAAG TGAGACAAGC TGTCCCCTTG TTTTTTTGGT GTTCAGTTCC 86297 .......... .......... .......... .......... .......... .......... 265 CTAGTATATT AGTTTATTAT GGCATAATGA ACTGTATTCC TCTTATCGTG TCATTTTTCA 86237 .......... .......... .......... .......... .......... .......... 265 ACAAATCACT GGAAGTTCCT TCGTTTCTGA GCAAGTTCAA TTGAATCCAG AAATCTGCTA 86177 .......... .......... .......... .......... .......... .......... 265 ATGAAACTAT ATGCGTGACT AAACTGAAAT CCTTATAAGA ACATCACAAC TTCCTTATCA 86117 .......... .......... .......... .......... .......... .......... 265 AAAGCAACTA TTTGTTTTAC ATATTTGACA ACTTAGTTGC ACTCCACTGT ATAATTAAAT 86057 .......... .......... .......... .......... .......... .......... 265 ATTGAATACT TTTGCATTTG AATATATATC GGTTTTAGCG CGTGGATGGA AAAATCAGAG 85997 .......... .......... .......... .......... .......... .......... 265 AGTTTGACAT TGCTTGGCTT AACTTATAAT TGAAGTATTT GATCTAATAT GATTCAGGTT 85937 .......... .......... .......... .......... .......... .......... 265 GAGGAAGAAA CTGGAATACA CCTGAATGTC CATGATATGG TCGATCTCAC GGCTTTTCTT 85877 .......... .......... .......... .......... .......... .......... 265 GACGCGTCAA CTGGGGGCAG AGTTTTTCCT TCTCCTGTAA GCATTCCACC ATCTTCTATA 85817 ||||| || | | | .......... .......... ..TTTTTTCT TTTAC-.... .......... .......... 278 AGACTCAGAT AACTCTCAGC GCATGCTTTC TTGGATTTTG TATTATAGGA ACAGAAAAAA 85757 .......... .......... .......... .......... .......... .......... 278 GTAGAAATAT TTGCATTAAC AACTAGTTTC TGCTAAAACT CTTATGGAAA TGTATGTGTT 85697 .......... .......... .......... .......... .......... .......... 278 GTAATATATA TTTTTTTTAT TTCTGTTAGT CAATAATTTT GATTCATTGC ACTGCTTGCT 85637 .......... .......... .......... .......... .......... .......... 278 TTACTGTTTG GAACCTGTAA ATTGTAATGA CATTGGATAT TGCTCCATGT GCACTTGCAA 85577 .......... .......... .......... .......... .......... .......... 278 TTAGTGGTAT ATTTGTGAAC CTTGCCCATT GCACGGGGTA GGACTAGACC TGACTTTTTT 85517 .......... .......... .......... .......... .......... .......... 278 TGTTAGAGAG GGAAAGGTTC GGAGTAGGCG CAACTACATT GGATCTTTTG TATGCAGCCA 85457 .......... .......... .......... .......... .......... .......... 278 GCCTTATATT GGGTGTATTT TTCAATTCAA AGATGAGGCC TTCTGTGATT GTTTCTGCCT 85397 .......... .......... .......... .......... .......... .......... 278 TTATATATCT CTTAACACTA TATTTATGTG GTTTTGGTGT TCTTTCAATG TTAGGGTGGA 85337 .......... .......... .......... .......... .......... .......... 278 TGTGATGAGG AGATGAGTTT GTTTCTCTAC AGAGGAAATG TCAGCAAAGA GAAAATCCAA 85277 .......... .......... .......... .......... .......... .......... 278 CAACTGCAAG GGAAAGAAAC CGGACTACGA GACCATGGTG AGCTGATCAA AGTGCATGTG 85217 .......... .......... .......... .......... .......... .......... 278 GTTCCATATG ATAAACTATG GCGTGCCACA GCTGATGCAA AGGCTCTGAC CGCCATTGCT 85157 .......... .......... .......... .......... .......... .......... 278 CTCTATGAGA TGGCTAAAAG AGATGGACTG TTGTCTTGAT CGACGAGTTA ATAATTTCTC 85097 .......... .......... .......... .......... .......... .......... 278 CTCCATTATA TAACAACTTA CGATTGTATG CTTTGCTGAA AAGATGACGA CTCTCTATTT 85037 .......... .......... .......... .......... .......... .......... 278 TAGGCAAGTC TGCTTCTACA GTATGAGCAT TCCTAG 85001 | | || ||| | | ||| || ||| | || ...GTATCTC CACTTAAATA GTA-GA-CAT TATAAG 309 hqPGS_C08HBa0165B06.1-_SGN-E237992+ (91273 91070) ******************************************************************************** EST sequence 240 +strand 643 n (File: SGN-E233074+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATCTCCACT TAAATACCAG ACATCACTAA 541 CTTAAGTCAC AAACCCCTTG ACCTTCCCAA TTATATTTAA GCACTAGAAA ACTTATATAT 601 AAAAAATCGA ATTTAACGCT TAATATTTAT CAACTAACAC CTA Predicted gene structure (within gDNA segment 92529 to 85844): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 Intron 1 91079 87094 (3986 n); Pd: 0.000 (s: 0.86), Pa: 0.547 (s: 0) Exon 2 87093 87079 ( 15 n); cDNA 257 271 ( 15 n); score: 0.667 Intron 2 87078 86847 ( 232 n); Pd: 0.000 (s: 0), Pa: 0.515 (s: 0.62) Exon 3 86846 86807 ( 40 n); cDNA 272 307 ( 36 n); score: 0.625 MATCH C08HBa0165B06.1- SGN-E233074+ 0.879 249 0.387 C PGS_C08HBa0165B06.1-_SGN-E233074+ (91273 91080,87093 87079,86846 86807) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCTAAA TCTAGAAACA AATAGGATAG TCAAACCTGA TTGAATTTAT 91037 | | | ||| | ||||| TGAACTAAAC AAGCTCT... .......... .......... .......... .......... 256 AAAAATTTCC TTAATGCATT TAACCAGATA CATGGGGCAT CCAACTGGAA AATTGGCTAA 90977 .......... .......... .......... .......... .......... .......... 256 AGCCTCACAC TCGGTGTTTG TCGCTTTCAT GTCCTCTGGT AAGGATGCTG ATCCAGATGA 90917 .......... .......... .......... .......... .......... .......... 256 AAGAGATACA TTAAAGGAGC AACTTGTATT TTATTATGTC AAGAGATCTT TAGAGGTAAT 90857 .......... .......... .......... .......... .......... .......... 256 AAAAACTACC AAAGTTAATT TCTGTGATGC TTGAACTTGT TCTCTGATTT AACTGAAAAT 90797 .......... .......... .......... .......... .......... .......... 256 TTAGGGATAC CCTGGGATTA CTCCTTTTGA GGGAATGGCT TCTGGAGTTG TTGCACTGGT 90737 .......... .......... .......... .......... .......... .......... 256 TAGACATCTG CCTGCTGGAA GCCCGTCTAT ATTCTATTGC ATCCACTGTC TCATTGAGAA 90677 .......... .......... .......... .......... .......... .......... 256 GGCTGATAGC CTTTGTAGTT CAGTCGATAC TACTCCAGAA ACTGACTTGT GGAAGAGTTG 90617 .......... .......... .......... .......... .......... .......... 256 GAATGGAAAG CTGGAGCCTT TCAAGATGTT GGATTTACTT TTTCGTCTCC TTTCTCTTGT 90557 .......... .......... .......... .......... .......... .......... 256 TGATATACAG GTAAAAGTGG TAACAATGTT TATCTTCAAC TGGGCAACCT AATGATGTGC 90497 .......... .......... .......... .......... .......... .......... 256 AGTTACAAGT TCAATCATTA GAGAACACGT GCCTTCCATG GATATGAAAA TATTCAATAT 90437 .......... .......... .......... .......... .......... .......... 256 GTGTGATACG TCACTTTAAT TGTTTTACTT TCGTGTCTTC CTTTGTTAGA AAATTTGGGT 90377 .......... .......... .......... .......... .......... .......... 256 AATTGGTATA ATTTGTAGGA GCTCTTTCTT GTTACATAAA AGCTTTGGAA AATGGATAGA 90317 .......... .......... .......... .......... .......... .......... 256 TGTTTCAACT ATGAAAATGC TGATTTGTCT TAGGTGTCCT AGCCCGATAT ATGCCTACTG 90257 .......... .......... .......... .......... .......... .......... 256 TGCAAATATA ATGCACTTGA CGTGGCTGAT ACTTTTTTTT GCCTCTCAGG TTCTGCCTAG 90197 .......... .......... .......... .......... .......... .......... 256 TTTGATGAAG TCACTGGCAC AGTTGGTCGT TACATTACCA CCAAGTGGCC AGGATATCAT 90137 .......... .......... .......... .......... .......... .......... 256 TCTCAATGAA TTATATCAAC ATGTTGCAGA ATCAGATGAT GTTACACGGA AACCGACAAT 90077 .......... .......... .......... .......... .......... .......... 256 GGTTTCGTGG TTGCAGTCAC TGTCTTATCT TAGTTATCAA AATACTAGCA AGAAAGCACC 90017 .......... .......... .......... .......... .......... .......... 256 AAAAGTGGCA GCAAAAGAAC TACATGATTC AATATCAGGA ACTACAGACT CATTAAGCAT 89957 .......... .......... .......... .......... .......... .......... 256 GAATAAAATC AGTGCACGTC TGTAGAAGAT TGAGGTATAC AATTCTCACT TAATTGTTGG 89897 .......... .......... .......... .......... .......... .......... 256 TAATATTACA TAAGAATACA TGTCCACTGT TAATCACTGG TCCCTTGAAA TTTCATCACA 89837 .......... .......... .......... .......... .......... .......... 256 TCACACATGA ATAAAACAAA CAATCGTGGA CAATGGTTAT GCAGGATTCA TGGATACCAG 89777 .......... .......... .......... .......... .......... .......... 256 AAATGTGTAA GATGAGGTTA ATGCTGAGAT TGGTGCTTCT TTAATCTGAT GAGAAAATGT 89717 .......... .......... .......... .......... .......... .......... 256 TCATTGTTTG GACTGCATTT GACTTGCAAT TCTGTGCATA AAGGAATGTT AGGTTTTATT 89657 .......... .......... .......... .......... .......... .......... 256 GCATTGTTGT TTATAAATAA ACTTGTATTA CAAAGGGAGC AATTGAGGAG AATTCTGAAA 89597 .......... .......... .......... .......... .......... .......... 256 GACTTCTCTT CTATTTATCA AGAACTGATG TGACAAGTCA CAAGTACTTG CAATTATAAA 89537 .......... .......... .......... .......... .......... .......... 256 TGTCACACAG GAGTGAGGAC CATGAATTGG CTTTCTGGTG TTATATCCCA CATATTTCCG 89477 .......... .......... .......... .......... .......... .......... 256 TGTCTATGAT TTCTGGATTC AATTTTGAAG TTTCTTCGCA GAATTATTAG GATCTGTTGC 89417 .......... .......... .......... .......... .......... .......... 256 TAGTAATCCA GGGCAAAATT CAACATCCAA CGCCAAGGGG TGAGTTCTCA CTTCCAAGTG 89357 .......... .......... .......... .......... .......... .......... 256 CTGCCTCCAA AATTGGTTTG TGGATAGCCA TAAACCTGTA TGGTGTAAAA TATGTTGGCT 89297 .......... .......... .......... .......... .......... .......... 256 TAATGTCTGT ATCCTTTGAG ATTTACCATT TGTTCATGAA GACTTGGGTC TGCTTTGAGA 89237 .......... .......... .......... .......... .......... .......... 256 TGGTACCGAC ACAAACTTCA TCAGATTCTG TTCAACAAGC CAAGAAGAAG TATGATGCAG 89177 .......... .......... .......... .......... .......... .......... 256 GGTGAAGTTG CATTTTCTTT TTATGCCAAG CTTCTGGCTG AGGAAATTGT GCTTTCCATA 89117 .......... .......... .......... .......... .......... .......... 256 TCTTGCTCTC ACTCACTTTA TCGAGCTTCC CTCATCTCAG CTTGTTCCTG CTTTACTTGG 89057 .......... .......... .......... .......... .......... .......... 256 TATTTATGCC GAATTGTGAA GCAACTCTGC CACTGCTCAT CCTATACCAT ATCATGATGC 88997 .......... .......... .......... .......... .......... .......... 256 CCCTTCCTCC AACGAACAAA TGCTGGAAAA GATTGAAAAT GTTGTAACAT AGACATTATA 88937 .......... .......... .......... .......... .......... .......... 256 CAACTTCTTG ACTATACAGT TATATGATTG ATTATACTGA ATTACAACTA TTCTGTTAGC 88877 .......... .......... .......... .......... .......... .......... 256 ATAAATGGTC AAGAAACACT GTGAAGTGTT CTTCCCTCAG TTCACTCTTC TAGTAGGACT 88817 .......... .......... .......... .......... .......... .......... 256 GGATACTTCC CAGAGATGTA TATTTAGCTG CCTTCCCCTT GGTGTATGTT TGAGCTTGAA 88757 .......... .......... .......... .......... .......... .......... 256 TAAAATGCTC CTTTACTGAA TTTAGTGGTT TTGACTCATA TTTTTGTTCT GATAAAGTTA 88697 .......... .......... .......... .......... .......... .......... 256 AGATCTTTCA TTCACTACAT CAAGTAGATG CATAGTTGCA AGGAAATTAA AAAAGCATTA 88637 .......... .......... .......... .......... .......... .......... 256 ACAGAAGTAC AAATGAATCT CTTTTTAGTG TGTTTTGGGG CGAGCTTTTT TATGTCGTTG 88577 .......... .......... .......... .......... .......... .......... 256 ATAACTAATA TGAGACGGGG TGAGTAAATG AGTAGAAAAT GCAAAAGAGT ATTGTTTTTC 88517 .......... .......... .......... .......... .......... .......... 256 GTCTTTTCGA TTTTATTATT ATACTAATAA AACATTCCAC AAGGGAGTAG TTTGCCAATA 88457 .......... .......... .......... .......... .......... .......... 256 GTGCTGGAAA ATGAGAGTAA CAGTGCCACG TTTTGGACTT CCATTCTTGA AACCTCTCTA 88397 .......... .......... .......... .......... .......... .......... 256 TGAATTCCCC TTTTCCTCTT CTTCTTCAAA CCTTTGGCCC AGAAATTGTT CTGGAAGCTT 88337 .......... .......... .......... .......... .......... .......... 256 CTCTGTAAAA ATGTCAACAA CCCCACCTTC TCAAATCGCT GACATCATCA ATCTCCCCAC 88277 .......... .......... .......... .......... .......... .......... 256 CCAACTCGAC CAACCGGTTT CTGTTGTCGC TGCTCCCGGC GTCTCCGATA CTCACTTCAG 88217 .......... .......... .......... .......... .......... .......... 256 GCAAATCCCT CAACTTTTTA TTTCATTTGC GATTCTATTT TTAGCTATCA ATTTACCCAA 88157 .......... .......... .......... .......... .......... .......... 256 TTCTTACTTA ATAGGGCATT TGTTGTGTGG GTTTTATAAG TTTTTCATGA TTTTTTAGAA 88097 .......... .......... .......... .......... .......... .......... 256 AAAAAAAAGA AGCAGCCTTT TCTATGATAA AGATTAAGCA ATTTTCTTGG CATGGATCCA 88037 .......... .......... .......... .......... .......... .......... 256 TTTGGATATA CCTCAACATG TTATTCTTTG TTTTCTTTTA CTTATTCGGG TTCTACTTTC 87977 .......... .......... .......... .......... .......... .......... 256 ATCTGTCAAT TTAAGTAATT CACACTTGAT TCTTGTTATG TCCTTTTTTT CTTTTTGGGG 87917 .......... .......... .......... .......... .......... .......... 256 TTCAAGTTTT AGCTTTCAGT TACGTAATTC ACTAGTATGC CATTTGAGGT GAGGTTGTAG 87857 .......... .......... .......... .......... .......... .......... 256 AAGTAAAGAT TTTTAGTTAT GTTAAAGATT AAACATTCTC TTGGGATGGC TTTGGATTAT 87797 .......... .......... .......... .......... .......... .......... 256 GTGGGCTGTT TGGATGCCAT TTGAGGTGAG GATTGTGCAT GATTTTCAGA AAAGGAAGCA 87737 .......... .......... .......... .......... .......... .......... 256 TTTTTATGTT AAAGGATGGT TTGAGTGAAT TGTCTGTTTT CTTGTAGGAA TGCTATTGAA 87677 .......... .......... .......... .......... .......... .......... 256 TCCTCATTGT TCAAACAGTG GTTAAAGAAC ATACAAACTG AAACAGGACT GCTGGCTAAT 87617 .......... .......... .......... .......... .......... .......... 256 GGAGCGCTGT CTTTAAAACA AGTTCTTATC CAGGTTTCTA TCTCAAGCTG TTCTGCTAAA 87557 .......... .......... .......... .......... .......... .......... 256 CTATGAAGAT AGTAACCTTT ACATGGTCAG TAGTTACAAT GAAATATATT GTTGGCTAAT 87497 .......... .......... .......... .......... .......... .......... 256 GGGACCATTA GAACACAAAT TGAGTTGCTT GAACCCTTCT AAATTTTTTC CACATTGGAC 87437 .......... .......... .......... .......... .......... .......... 256 AATTGGAGGA AAATGGTCTG TCTTCTGATC ATAACTGATG CTGAGGCTCT TAATTATATC 87377 .......... .......... .......... .......... .......... .......... 256 TTTATTTAGT ATGTTTTGTC CTAACATTTA TCAAAAGAAT GGATATCTAG GTTGATTGTG 87317 .......... .......... .......... .......... .......... .......... 256 CACTTTATGC TCCTTAAAGA TTCCTATGCT TCCCTAACAT AGTTGTCAGT CGTGCTCCCT 87257 .......... .......... .......... .......... .......... .......... 256 CCTAAAGAGG ATAAAAAGGA AGTCTTCTTG ATGTACGTGT CTGAATTTTT GGAATGATGT 87197 .......... .......... .......... .......... .......... .......... 256 TAACTCGCAC TATCAGCGAC CAAGAGTCCA AGACATAGTG ACTATCACAG GATTTGAAAC 87137 .......... .......... .......... .......... .......... .......... 256 TGCTTTTGGT CCTGCTACCG CAAACATTAA GTTTGCTTTA CAGCTGACAT TCCTTTTTAT 87077 |||| | ||||| .......... .......... .......... .......... ...TAGACAA TAATTTTT.. 271 GTGTTGGAGC AGGGTGTAGA TATGTTTGGA GAGCGTTTGG GGTTTCTAAA ATTCAAAGCA 87017 .......... .......... .......... .......... .......... .......... 271 GATATTATTG ATAAGGAAAC GGGTCAAAAG GTATCTGATT AGAATCTCTC CATCCCATTG 86957 .......... .......... .......... .......... .......... .......... 271 GATATGTAAT TCATTCAGCC GGACTATGAA TAGCTTCTCT TAAAGCTGTG TCCTCAATTT 86897 .......... .......... .......... .......... .......... .......... 271 ATTTTGCTTT GGTTTTTTTT CCTTGTACCT TAGAGCATTG AACAATACAG TACTCGTGAC 86837 | || | || .......... .......... .......... .......... .......... T-CT-TTTAC 279 ATAGCTCGAC AATATTAGCA TGACAATGAT 86807 || ||| || | ||| | ||| || || GTATCTCCAC TTAAATAGTA -GAC-ATTAT 307 hqPGS_C08HBa0165B06.1-_SGN-E233074+ (91273 91080) ******************************************************************************** EST sequence 143 +strand 528 n (File: SGN-E242674+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATCTCCACT TAAATACC Predicted gene structure (within gDNA segment 92529 to 86994): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 MATCH C08HBa0165B06.1- SGN-E242674+ 0.879 194 0.367 C PGS_C08HBa0165B06.1-_SGN-E242674+ (91273 91080) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCT 91080 | | | ||| | ||||| TGAACTAAAC AAGCTCT 256 hqPGS_C08HBa0165B06.1-_SGN-E242674+ (91273 91080) ******************************************************************************** EST sequence 304 +strand 310 n (File: SGN-E233594+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG Predicted gene structure (within gDNA segment 92529 to 89174): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 MATCH C08HBa0165B06.1- SGN-E233594+ 0.879 194 0.626 C PGS_C08HBa0165B06.1-_SGN-E233594+ (91273 91080) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCT 91080 | | | ||| | ||||| TGAACTAAAC AAGCTCT 256 hqPGS_C08HBa0165B06.1-_SGN-E233594+ (91273 91080) ******************************************************************************** EST sequence 321 +strand 514 n (File: SGN-E233735+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATC Predicted gene structure (within gDNA segment 92529 to 87134): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 MATCH C08HBa0165B06.1- SGN-E233735+ 0.879 194 0.377 C PGS_C08HBa0165B06.1-_SGN-E233735+ (91273 91080) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCT 91080 | | | ||| | ||||| TGAACTAAAC AAGCTCT 256 hqPGS_C08HBa0165B06.1-_SGN-E233735+ (91273 91080) ******************************************************************************** EST sequence 322 +strand 484 n (File: SGN-E377238+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACAC Predicted gene structure (within gDNA segment 92529 to 87434): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 MATCH C08HBa0165B06.1- SGN-E377238+ 0.879 194 0.401 C PGS_C08HBa0165B06.1-_SGN-E377238+ (91273 91080) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCT 91080 | | | ||| | ||||| TGAACTAAAC AAGCTCT 256 hqPGS_C08HBa0165B06.1-_SGN-E377238+ (91273 91080) ******************************************************************************** EST sequence 382 +strand 434 n (File: SGN-E240879+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAAT Predicted gene structure (within gDNA segment 92529 to 87934): Exon 1 91273 91080 ( 194 n); cDNA 63 256 ( 194 n); score: 0.879 MATCH C08HBa0165B06.1- SGN-E240879+ 0.879 194 0.447 C PGS_C08HBa0165B06.1-_SGN-E240879+ (91273 91080) Alignment (genomic DNA sequence = upper lines): AATTTGGTCA ACTTAAAACA GCTTATAAGC TAAAAAACAA AAAGCACCCC TACCCCAGCT 91214 ||| |||||| |||||||||| |||||||||| ||| || || |||||||||| |||||||||| AATGTGGTCA ACTTAAAACA GCTTATAAGC TAA--AA-AA AAAGCACCCC TACCCCAGCT 119 TTTAGCTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA TTTCGAGTAT 91157 |||| ||||| |||||||||| ||| |||| |||||||||| |||||||||| ||| |||||| TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA TTTTGAGTAT 179 TGCCAAACAG TTAAATAAGT CAAAAACCAG CTTTTAAGTC AGTTTGACCA GCTTTTAAGC 91097 ||||||||| ||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| TGCCAAACAA CTAAATAAGT CAAAAATCAG TTTTTAAGTC AGTTTGATCA GCTTTTAAGC 239 TAAGCCAAAT AGGCTCT 91080 | | | ||| | ||||| TGAACTAAAC AAGCTCT 256 hqPGS_C08HBa0165B06.1-_SGN-E240879+ (91273 91080) ******************************************************************************** EST sequence 274 +strand 468 n (File: SGN-E228654+) 1 TTTTTTTTTT TTTTTTTTTG GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGG GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTCAGT GAATCTTGTT GGACAGTGAA AGTGAAATAG AAATTGTTTG AAACCTCGCT 421 AGACCGCAAC TCAGGTCTCA TGACATGAGC TACCACTTCT ACATTGAT Predicted gene structure (within gDNA segment 92003 to 86717): Exon 1 91183 91120 ( 64 n); cDNA 83 146 ( 64 n); score: 0.922 PPA cDNA 19 1 MATCH C08HBa0165B06.1- SGN-E228654+ 0.922 64 0.137 C PGS_C08HBa0165B06.1-_SGN-E228654+ (91183 91120) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT CGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 91124 ||| |||||| || ||||| ||||||||| |||||||||| |||||||||| |||||||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 91120 |||| TTAA 146 hqPGS_C08HBa0165B06.1-_SGN-E228654+ (91183 91120) ******************************************************************************** EST sequence 208 +strand 385 n (File: SGN-E217478+) 1 TTTTTTTTTT TTTTTGTTGG GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGT GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTCAGT GAATCTTGTT GGACA Predicted gene structure (within gDNA segment 92003 to 87547): Exon 1 91183 91120 ( 64 n); cDNA 83 146 ( 64 n); score: 0.922 PPA cDNA 18 1 MATCH C08HBa0165B06.1- SGN-E217478+ 0.922 64 0.166 C PGS_C08HBa0165B06.1-_SGN-E217478+ (91183 91120) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT CGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 91124 ||| |||||| || ||||| ||||||||| |||||||||| |||||||||| |||||||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 91120 |||| TTAA 146 hqPGS_C08HBa0165B06.1-_SGN-E217478+ (91183 91120) ******************************************************************************** EST sequence 275 +strand 397 n (File: SGN-E229134+) 1 TTTTTTTTTT TTTTTTTTTT GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGT GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTTCAG TGAATCTTGT TGGACAGTGA AAGTGAA Predicted gene structure (within gDNA segment 91967 to 87427): Exon 1 91183 91120 ( 64 n); cDNA 83 146 ( 64 n); score: 0.922 PPA cDNA 20 1 MATCH C08HBa0165B06.1- SGN-E229134+ 0.922 64 0.161 C PGS_C08HBa0165B06.1-_SGN-E229134+ (91183 91120) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT CGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 91124 ||| |||||| || ||||| ||||||||| |||||||||| |||||||||| |||||||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 91120 |||| TTAA 146 hqPGS_C08HBa0165B06.1-_SGN-E229134+ (91183 91120) ******************************************************************************** EST sequence 142 +strand 506 n (File: SGN-E578392+) 1 CTCAGCTTAA ACCAGTTTTT TTCGATTCGA TGTTCGATAT ATATAACGAA GTCAAATCTC 61 ATATATTATT AAAGACATAA ATATAGATAA AGGTGACAGA GTTAGTTTAT CAACCTAACA 121 TGTCTAATCC ACCTAAGTTT GGGAAATTAA AGTTATTGAC CTACTCATTT ATTAGTTTAC 181 TGGGTAAGAA ATTAAAAATA ATATATAGTC TAAATTAATT TATGAGAATT TTTGTCAGAA 241 TATTTTCTTA TTTAGGGCCC GTTTGGATGG GCTTAATAAA AACAGCTTTA AAAAAGTACT 301 TTTGAAAGTG CTGAAACTTA TTTCTAAAAT AAACAGTTAT GCATTTGGAT AAAAGTGCTG 361 AAGTTGTTAT GCCAAACGTG AAAAGCGAAA AATGGAAGAA AGAGATGTTA GGGTTATATG 421 TGTAACTTGG AAATTGTATA AAAATATTAA GGGCAAAAAG ATAAAGATGT GATCAACTTA 481 AAACAGCTTA TAAGCTAAAA AAAAAA Predicted gene structure (within gDNA segment 95173 to 90587): Exon 1 94505 94449 ( 57 n); cDNA 143 198 ( 56 n); score: 0.561 Intron 1 94448 94169 ( 280 n); Pd: 0.407 (s: 0.54), Pa: 0.000 (s: 0) Exon 2 94168 94140 ( 29 n); cDNA 199 227 ( 29 n); score: 0.621 Intron 2 94139 93791 ( 349 n); Pd: 0.229 (s: 0), Pa: 0.000 (s: 0) Exon 3 93790 93765 ( 26 n); cDNA 228 253 ( 26 n); score: 0.654 Intron 3 93764 91444 (2321 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.98) Exon 4 91443 91268 ( 176 n); cDNA 254 429 ( 176 n); score: 0.943 PPA cDNA 497 506 MATCH C08HBa0165B06.1- SGN-E578392+ 0.850 288 0.569 C PGS_C08HBa0165B06.1-_SGN-E578392+ (94505 94449,94168 94140,93790 93765,91443 91268) Alignment (genomic DNA sequence = upper lines): GAAATATAAG TGTTTCATCT GCTGAACGCT TACTGTTCGA CGAAAGTCCT AAGAGAAGTT 94446 ||||| ||| | || | || || | | || | | | | ||| | | | || GAAATTAAAG TTATTGACCT ACTCATTTAT TAGTTTACTG GGTAAGAAAT TA-AAAA... 198 AATGTTGTTA AAAAGTACAT ATTTTTTGCT TTTTGTGTCG TTTGTGACAC TAATATTTGC 94386 .......... .......... .......... .......... .......... .......... 198 CGAACTACTG CTCTCTTTTT ATTGGTTTGC CCTTTACGTT GAAACTAAGC TCCCGTTTGG 94326 .......... .......... .......... .......... .......... .......... 198 TCATCAATTT TGAAGTTGAA ACTCGAAAAT TTGAGCTTTT TTGAACTTGT GATTTTTGGT 94266 .......... .......... .......... .......... .......... .......... 198 ATATGAAGTT GTGTTTGGAC ATGTATTTTG CTTGGAAAAA GTTTCTAAGT TTTGTGAGTG 94206 .......... .......... .......... .......... .......... .......... 198 GATTGTGGAA GTCCCAATTG GGAATTGATT TTTTTGATCA CATTTCATGC AAATAAATAT 94146 | | || | | |||| ||| | .......... .......... .......... .......TAA TATATAGTCT AAATTAATTT 221 TTGAGGGTAA ACTTTCAAAA GCTATGACCC TGACGCTGGC TAAGATTTTA GAAATTTTAC 94086 |||| ATGAGA.... .......... .......... .......... .......... .......... 227 TCGACTCTAC TATTCCATTT CAAGTTTCCC TTGTTTTAGC TTGAATTTCT GGTTGATTAC 94026 .......... .......... .......... .......... .......... .......... 227 AGAAGCCTTA AGTAGTCAGT GTTACTTTCT AACGAAATGT GAAGGATTTC CATTCTCGCT 93966 .......... .......... .......... .......... .......... .......... 227 CTCTCATGCG GGGCTAATTG ACTTATTGAA TGACTCCTCT CTTTACCGTC AAGTGGATTT 93906 .......... .......... .......... .......... .......... .......... 227 CAGCTCTTTC TTTTTATTAC GGGAAAGAAA TTTAGGAAAT CTTCCTACTT GTCACGAGAC 93846 .......... .......... .......... .......... .......... .......... 227 ACTATTGTTT GTTGCATATT GAATTTGAAA TTGTTAAGGA AGGAATCCTG CCCTTATTTT 93786 ||||| .......... .......... .......... .......... .......... .....ATTTT 232 TGTTTTAGTA TAATGTCCTT TGTATCCTCT TTCCTTTGAT CTGCTCAGAA AACTGGGGAA 93726 ||| | || | | | || | TGTCAGAATA TTTTCTTATT T......... .......... .......... .......... 253 AAATGTTATC TATAACTTTC CTCATTATTT TTAAAAGGTA GCTAATTCCA TTGATTAATA 93666 .......... .......... .......... .......... .......... .......... 253 ATTTTATCAA GATACTTGAA TATAGCTTAC CCCCTCCGCT CTTTTATCAC AGCTTATAAA 93606 .......... .......... .......... .......... .......... .......... 253 TGGGATAATC CTTTTGAAAG CAAAGCATTT ACTACGTTCA CTGTTGTGAT AAATATATGT 93546 .......... .......... .......... .......... .......... .......... 253 AGTTCAGGTC GTGGATAACT TAAGTCACCT AAATCTTGTA CTTAATTTGG ATCAAATTTT 93486 .......... .......... .......... .......... .......... .......... 253 GTAGTGATTA AGGTTTATTG ATGAGACTTC GGTAGAAAAT TAGTGGGGTC TTAGCTATAT 93426 .......... .......... .......... .......... .......... .......... 253 CCATTATGCT TTAGGGAATT AGCAGTCTTT TTTAATTTAT TGCTTGCAAT GTTTGATCTT 93366 .......... .......... .......... .......... .......... .......... 253 GCAGTTGCAT AATTTACATA ATGGCAAAGA AACCTGAATC TGTATTCCTT GAAGAATGGC 93306 .......... .......... .......... .......... .......... .......... 253 TATGCAGAAT CAGTGGCACC CAGGAGAACG TGACACTGAA ACATCCTTCT TCGGCATCAG 93246 .......... .......... .......... .......... .......... .......... 253 CCCAAGCTAT CATCCAAGCA TGGGCTGATC TTAGGGACTC CCTTCAAAAT CAAGCATTCC 93186 .......... .......... .......... .......... .......... .......... 253 ACTCAAATCA CCTCCAATCC CTAAGGACCC TCGTTGATGC TCAGTTCTCT CTCTATATTG 93126 .......... .......... .......... .......... .......... .......... 253 CTGATCCACA AACAAAAATT CTGTTGTCTA TTTTGTCCTC GCAAAAAGTC TCCCTTCCAC 93066 .......... .......... .......... .......... .......... .......... 253 AGGAATCTTA TCCTTTATTT GTCAGGCTTC TATACATTTG GGTTCGGAAA TCATTTAGAC 93006 .......... .......... .......... .......... .......... .......... 253 ATTCTCCTGG GGTCATTGAT TCAGCAGTTG AGGTCCTTTT GCACCTTTTC TCTGGGCATA 92946 .......... .......... .......... .......... .......... .......... 253 TTCATTCAAA CAAAAGCTTA TCTTTCTTCT CTGAAGGTGT TCTTCTCCTT GGTGCTCTTT 92886 .......... .......... .......... .......... .......... .......... 253 CTTTTGTACC TTCAGCATCC GAAAAATCTA AAACCGTTTG CTTGAAATTG CTCTGCCAGC 92826 .......... .......... .......... .......... .......... .......... 253 TTCTTGAAGA AGACTATAGA TTGATCCATT TGTCTGAGAG GACAATCCCG AATGTTCTTG 92766 .......... .......... .......... .......... .......... .......... 253 CAGGAATTGG CTATGCTCTA TCTTCTTCTG TGAACATATA TTTTGTTAGA GTTCTCAGTT 92706 .......... .......... .......... .......... .......... .......... 253 GTTTAATGGA ATTGTGGGAT AAAAGCGACG GCCCTTTTGC TAGTTTGTCT AATGGGCTCA 92646 .......... .......... .......... .......... .......... .......... 253 TGATACTGCA TCTGATTGAG TGGAGTTTCT CAAATTTTAT CAATTCTAAC TCCACAGACA 92586 .......... .......... .......... .......... .......... .......... 253 AGATTGATCT TTTCAGTAGA GAGGTATTGA ATAACACACG ACCAGCATTC TCTTTGTTTG 92526 .......... .......... .......... .......... .......... .......... 253 CTGTAGTCAT GGCTGCTGCT GGAGTACTGA GAGTCATCAA TAGATCTGAA CAGAAAGCAC 92466 .......... .......... .......... .......... .......... .......... 253 TAACTGACCT TAAGATTTCT GTTGAGGAAC GAATCGAGAC CATTGCATGT GGTTTAGTTT 92406 .......... .......... .......... .......... .......... .......... 253 CTAGTGCTGG AGATGCTGAT TATGCTACAA TGGAGCCAAG AAACTCCTTT CTGTTACAGT 92346 .......... .......... .......... .......... .......... .......... 253 GTATATCATT AGCTTTATCT AAAAGTGGAC CATTTTCTTA CCAACCTCAT GTGTTTCTAT 92286 .......... .......... .......... .......... .......... .......... 253 GCCTTGCTAC AGCTTTATTG ACTGAAATCT TCCCCTTGCC ACACATTTAT GTAAAAATCC 92226 .......... .......... .......... .......... .......... .......... 253 AAGAATCACC TTCTGGCAAC TTGGTGGGAT TAGTTCTCAA TGACGTGCAG CAACACCTAG 92166 .......... .......... .......... .......... .......... .......... 253 ACAGCATTAT TTTTAAGGAA GCAGGGGCCA TAACTGGTGT TTTTTGCAAT CAGTATGTCA 92106 .......... .......... .......... .......... .......... .......... 253 TGGCTGATGA GGAAAACCGA AGTGCCGTAG AGGATATCAT ATGGAATTAC TGTCGGGATG 92046 .......... .......... .......... .......... .......... .......... 253 TCTATATGTG GCATCGGAAG GTTGCTTTGA TGCTTGGAGG TAGGGAGGAA GCGCTGTTAG 91986 .......... .......... .......... .......... .......... .......... 253 GGAATCTGGA AAAAATTGCT GAATCTGCTT TTCTCATGGT TGTGGTCTTT GCCTTAGCAG 91926 .......... .......... .......... .......... .......... .......... 253 TAACAAAGCA AAAGTTAAGT TTAAGTGCTC CCCAAGAAAT TCAAATGAGA CTTTCAGTGA 91866 .......... .......... .......... .......... .......... .......... 253 GGATATTGGT TGCATTTTCT TGTATGGAAT ATTTCCGCAG AATGCGTTTG CCAGAGTACA 91806 .......... .......... .......... .......... .......... .......... 253 TGGATACAAT TAGAGCAGTT GTTACAAGGG TTCAGGAGAA TGAACATGCC TGTGTCTCAT 91746 .......... .......... .......... .......... .......... .......... 253 TCTTGGAATC TATTCCATCT TATGATGATT TGACAAACCA AGCTGGTTGT GACTTTCTCC 91686 .......... .......... .......... .......... .......... .......... 253 TGCATATTTT AATTGTCAAT ATCTTTGCTA TATTACAGTC TTTCACAAAA CATCACCTTT 91626 .......... .......... .......... .......... .......... .......... 253 TTCCTTGCAG TACCTTCTAG CTTTCAGAAA ATGGAATATA TGTGGACTAC TGATGAAGTG 91566 .......... .......... .......... .......... .......... .......... 253 CAGACTGCTC GGATCTTATT TTACATGCGA GTAATTCCAA CTTGCATTGA ATGTATACCA 91506 .......... .......... .......... .......... .......... .......... 253 GCCTCTGTAT TCCGCAAGGT TCTGGCTCCA ACCATGTTCC TGTATCCTGC ATCAGATGGT 91446 .......... .......... .......... .......... .......... .......... 253 TAAGGGCCCG TTTGGATGGG CTTAATAAAA GCAGCTTTAA AAAAGTACTT TTGAAAGTGC 91386 |||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ..AGGGCCCG TTTGGATGGG CTTAATAAAA ACAGCTTTAA AAAAGTACTT TTGAAAGTGC 311 TGAAACTTAT TTTTAAAATA AGCAGTTATG CGTTTGGATA AAAGTGCTGA AGTTGTTATG 91326 |||||||||| || ||||||| | |||||||| | |||||||| |||||||||| |||||||||| TGAAACTTAT TTCTAAAATA AACAGTTATG CATTTGGATA AAAGTGCTGA AGTTGTTATG 371 CCAAACGTGA AAAGGAAAAA ATGGAAAAAA GAGATGTTAG GGTTATATGG ATAATTTG 91268 |||||||||| |||| |||| |||||| ||| |||||||||| ||||||||| ||| ||| CCAAACGTGA AAAGCGAAAA ATGGAAGAAA GAGATGTTAG GGTTATATGT GTAACTTG 429 hqPGS_C08HBa0165B06.1-_SGN-E578392+ (91443 91268) ******************************************************************************** EST sequence 119 -strand 346 n (File: SGN-E391901-) 1 ATACTCTTCA CCCATGAGTT TGGACTGATT GACAAGAAGG AACTGGCTCC ACTTCAAGAG 61 ATTATAGAAT CCATCATCGT CCCATACTGA ACAATCGTGA TATTTCACTG TGCTGCTAAA 121 GCTGGAACTA AATAGTGTAA TGTAATGCAA TAAAGTTTCT CGTGGTCATC CAAAGTGTAT 181 AGCCTCAGCT GACAATTTGA AGTGTCTATG AATGTATAAT GGTTGTAGCT TTTTCTATAT 241 TGCTTTTAAG TAAAGTGCTT TTGTGACCCG TTTGGATGGG CTTAGTAAAA GCAGCTTTAA 301 AAAAGTACTT TTGAAAGGAC TGAAACTTAT TTTTAAAAAA AAAAAA Predicted gene structure (within gDNA segment 94709 to 90688): Exon 1 92577 92563 ( 15 n); cDNA 243 257 ( 15 n); score: 0.800 Intron 1 92562 91505 (1058 n); Pd: 0.656 (s: 0), Pa: 0.137 (s: 0) Exon 2 91504 91498 ( 7 n); cDNA 258 264 ( 7 n); score: 0.714 Intron 2 91497 91442 ( 56 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.96) Exon 3 91441 91365 ( 77 n); cDNA 265 341 ( 77 n); score: 0.935 MATCH C08HBa0165B06.1- SGN-E391901- 0.935 99 0.286 C PGS_C08HBa0165B06.1-_SGN-E391901- (92577 92563,91504 91498,91441 91365) Alignment (genomic DNA sequence = upper lines): CTTTTCAGTA GAGAGGTATT GAATAACACA CGACCAGCAT TCTCTTTGTT TGCTGTAGTC 92518 ||||| |||| || | CTTTTAAGTA AAGTG..... .......... .......... .......... .......... 257 ATGGCTGCTG CTGGAGTACT GAGAGTCATC AATAGATCTG AACAGAAAGC ACTAACTGAC 92458 .......... .......... .......... .......... .......... .......... 257 CTTAAGATTT CTGTTGAGGA ACGAATCGAG ACCATTGCAT GTGGTTTAGT TTCTAGTGCT 92398 .......... .......... .......... .......... .......... .......... 257 GGAGATGCTG ATTATGCTAC AATGGAGCCA AGAAACTCCT TTCTGTTACA GTGTATATCA 92338 .......... .......... .......... .......... .......... .......... 257 TTAGCTTTAT CTAAAAGTGG ACCATTTTCT TACCAACCTC ATGTGTTTCT ATGCCTTGCT 92278 .......... .......... .......... .......... .......... .......... 257 ACAGCTTTAT TGACTGAAAT CTTCCCCTTG CCACACATTT ATGTAAAAAT CCAAGAATCA 92218 .......... .......... .......... .......... .......... .......... 257 CCTTCTGGCA ACTTGGTGGG ATTAGTTCTC AATGACGTGC AGCAACACCT AGACAGCATT 92158 .......... .......... .......... .......... .......... .......... 257 ATTTTTAAGG AAGCAGGGGC CATAACTGGT GTTTTTTGCA ATCAGTATGT CATGGCTGAT 92098 .......... .......... .......... .......... .......... .......... 257 GAGGAAAACC GAAGTGCCGT AGAGGATATC ATATGGAATT ACTGTCGGGA TGTCTATATG 92038 .......... .......... .......... .......... .......... .......... 257 TGGCATCGGA AGGTTGCTTT GATGCTTGGA GGTAGGGAGG AAGCGCTGTT AGGGAATCTG 91978 .......... .......... .......... .......... .......... .......... 257 GAAAAAATTG CTGAATCTGC TTTTCTCATG GTTGTGGTCT TTGCCTTAGC AGTAACAAAG 91918 .......... .......... .......... .......... .......... .......... 257 CAAAAGTTAA GTTTAAGTGC TCCCCAAGAA ATTCAAATGA GACTTTCAGT GAGGATATTG 91858 .......... .......... .......... .......... .......... .......... 257 GTTGCATTTT CTTGTATGGA ATATTTCCGC AGAATGCGTT TGCCAGAGTA CATGGATACA 91798 .......... .......... .......... .......... .......... .......... 257 ATTAGAGCAG TTGTTACAAG GGTTCAGGAG AATGAACATG CCTGTGTCTC ATTCTTGGAA 91738 .......... .......... .......... .......... .......... .......... 257 TCTATTCCAT CTTATGATGA TTTGACAAAC CAAGCTGGTT GTGACTTTCT CCTGCATATT 91678 .......... .......... .......... .......... .......... .......... 257 TTAATTGTCA ATATCTTTGC TATATTACAG TCTTTCACAA AACATCACCT TTTTCCTTGC 91618 .......... .......... .......... .......... .......... .......... 257 AGTACCTTCT AGCTTTCAGA AAATGGAATA TATGTGGACT ACTGATGAAG TGCAGACTGC 91558 .......... .......... .......... .......... .......... .......... 257 TCGGATCTTA TTTTACATGC GAGTAATTCC AACTTGCATT GAATGTATAC CAGCCTCTGT 91498 | | ||| .......... .......... .......... .......... .......... ...CTTTTGT 264 ATTCCGCAAG GTTCTGGCTC CAACCATGTT CCTGTATCCT GCATCAGATG GTTAAGGGCC 91438 | || .......... .......... .......... .......... .......... ......GACC 268 CGTTTGGATG GGCTTAATAA AAGCAGCTTT AAAAAAGTAC TTTTGAAAGT GCTGAAACTT 91378 |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| ||||||||| CGTTTGGATG GGCTTAGTAA AAGCAGCTTT AAAAAAGTAC TTTTGAAAGG ACTGAAACTT 328 ATTTTTAAAA TAA 91365 |||||||||| || ATTTTTAAAA AAA 341 hqPGS_C08HBa0165B06.1-_SGN-E391901- (91441 91365) ******************************************************************************** EST sequence 20 +strand 666 n (File: SGN-E371800+) 1 TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 61 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 121 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 181 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 241 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 301 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 361 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 421 TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 481 TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 541 AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 601 TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTAGGTTCAA CTGCTGGGAG 661 AGCCTT Predicted gene structure (within gDNA segment 99115 to 100990): Exon 1 99715 100380 ( 666 n); cDNA 1 666 ( 666 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E371800+ 1.000 666 1.000 C PGS_C08HBa0165B06.1+_SGN-E371800+ (99715 100380) Alignment (genomic DNA sequence = upper lines): TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 99774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 60 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 99834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 120 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 99894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 180 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 99954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 240 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 100014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 300 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 100074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 360 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 100134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 420 TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 100194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 480 TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 100254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 540 AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 100314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 600 TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTAGGTTCAA CTGCTGGGAG 100374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTAGGTTCAA CTGCTGGGAG 660 AGCCTT 100380 |||||| AGCCTT 666 hqPGS_C08HBa0165B06.1+_SGN-E371800+ (99715 100380) ******************************************************************************** EST sequence 19 +strand 665 n (File: SGN-E372204+) 1 TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 61 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 121 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 181 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 241 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 301 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 361 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 421 TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 481 TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 541 AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 601 TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTACGTTCAA CTGCTGGGAG 661 AGCCT Predicted gene structure (within gDNA segment 99115 to 100989): Exon 1 99715 100379 ( 665 n); cDNA 1 665 ( 665 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E372204+ 0.998 665 1.000 C PGS_C08HBa0165B06.1+_SGN-E372204+ (99715 100379) Alignment (genomic DNA sequence = upper lines): TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 99774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 60 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 99834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 120 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 99894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 180 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 99954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 240 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 100014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 300 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 100074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 360 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 100134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 420 TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 100194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGTTGTT TGTGGTAATA CTTCATTGAG GTACCTTCCT GTATCGTTTA ATCAAGCAAT 480 TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 100254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGCTACT ACCCCATTTT TTACTGCTAT TTTTGCTTTT GTGATTACTT GTAAGAAAGA 540 AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 100314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTGCTGAG GTTTATTTAG CTCTTGTCCC TGTGGTTCTT GGTATTGTTT TGGCTAGCAA 600 TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTAGGTTCAA CTGCTGGGAG 100374 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TAGTGAGCCA TTGTTCCATT TGTTTGGGTT CTTGATGGCT TTACGTTCAA CTGCTGGGAG 660 AGCCT 100379 ||||| AGCCT 665 hqPGS_C08HBa0165B06.1+_SGN-E372204+ (99715 100379) ******************************************************************************** EST sequence 8 +strand 422 n (File: SGN-E282699+) 1 TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 61 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 121 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 181 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 241 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 301 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 361 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGGTT 421 TT Predicted gene structure (within gDNA segment 99115 to 100791): Exon 1 99715 100136 ( 422 n); cDNA 1 422 ( 422 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E282699+ 0.998 422 1.000 C PGS_C08HBa0165B06.1+_SGN-E282699+ (99715 100136) Alignment (genomic DNA sequence = upper lines): TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 99774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGTTGTT GGAAGCATTG TAATGGTGGA GGCACAGTCA TGGACTACAA GAAGGGGAAG 60 CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 99834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCCAAGA TTGGAGTCAC CCCAAGATCA AGTCTTGGAT ATGCCAGTAA CCCCAACTGC 120 TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 99894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAATCAGG CAGCAACAGT ATTCTAATGG TGGGATAACT TCTTTGGTGT CACCAAATGT 180 ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 99954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTACTGCT CTTATAATTG CTTCTTGGTA CTGTTCAAAT ATTGGGGTGT TGTTGCTAAA 240 CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 100014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCTT TTGAGTTTTT ATGGTTATCG TTACCCAATA TTCTTGACTA TGTTGCATAT 300 GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 100074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCATGT GCTACTTATA GTTTAGTTGC TATTAAGTGG CTGGAAGTTG TTCCTTTCCA 360 GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGTTT 100134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || GCAGATACAT AGCAGGAAAC AGTTCTTCAA GATTCTTGCT TTGAGTGCTA TTTTTTGGTT 420 TT 100136 || TT 422 hqPGS_C08HBa0165B06.1+_SGN-E282699+ (99715 100136) ******************************************************************************** EST sequence 62 +strand 305 n (File: SGN-E202230+) 1 TATGGGTATC GTTACCCAAT ATTCTTGACT ATGTTGCATA TGTTGTCATG TGCTACTTAT 61 AGTTTACTTG CTATTAAGTG GCTGGAAGTT GTTCCTTTCC AGCAGATACC TAGCAGGAAA 121 CAGGTCTTCA AGATTCTTGC TTTGAGTGCT ATTTTTTGTT TTTCTGTTGT TTGTGGTAAT 181 ACTTCATTGA GGTACCTTCC TGTATCGTTT AATCAAGCAA TTGGTGCTAC TACCCCATTA 241 TTTACTGCTA TTTTTGCTTT TGTGATTACT ATGAAGAAAG AAACTGCTGA GGTTTATTTA 301 GCTCT Predicted gene structure (within gDNA segment 99320 to 100888): Exon 1 99974 100278 ( 305 n); cDNA 1 305 ( 305 n); score: 0.974 MATCH C08HBa0165B06.1+ SGN-E202230+ 0.974 305 1.000 C PGS_C08HBa0165B06.1+_SGN-E202230+ (99974 100278) Alignment (genomic DNA sequence = upper lines): TATGGTTATC GTTACCCAAT ATTCTTGACT ATGTTGCATA TGTTGTCATG TGCTACTTAT 100033 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGGTATC GTTACCCAAT ATTCTTGACT ATGTTGCATA TGTTGTCATG TGCTACTTAT 60 AGTTTAGTTG CTATTAAGTG GCTGGAAGTT GTTCCTTTCC AGCAGATACA TAGCAGGAAA 100093 |||||| ||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AGTTTACTTG CTATTAAGTG GCTGGAAGTT GTTCCTTTCC AGCAGATACC TAGCAGGAAA 120 CAGTTCTTCA AGATTCTTGC TTTGAGTGCT ATTTTTTGTT TTTCTGTTGT TTGTGGTAAT 100153 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGTCTTCA AGATTCTTGC TTTGAGTGCT ATTTTTTGTT TTTCTGTTGT TTGTGGTAAT 180 ACTTCATTGA GGTACCTTCC TGTATCGTTT AATCAAGCAA TTGGTGCTAC TACCCCATTT 100213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACTTCATTGA GGTACCTTCC TGTATCGTTT AATCAAGCAA TTGGTGCTAC TACCCCATTA 240 TTTACTGCTA TTTTTGCTTT TGTGATTACT TGTAAGAAAG AAACTGCTGA GGTTTATTTA 100273 |||||||||| |||||||||| |||||||||| ||||||| |||||||||| |||||||||| TTTACTGCTA TTTTTGCTTT TGTGATTACT ATGAAGAAAG AAACTGCTGA GGTTTATTTA 300 GCTCT 100278 ||||| GCTCT 305 hqPGS_C08HBa0165B06.1+_SGN-E202230+ (99974 100278) ******************************************************************************** EST sequence 91 +strand 538 n (File: SGN-E266638+) 1 GATCCCCCGG GCTGCAGGTT GAAATCTGTT GTTCTGGGGT TGTTGTTATC CTCTGATGCT 61 GAGAAATTGC ACTCTATGAA TCTGTTATTA TACATGGCTC CAATGGCAGC AATGATTTTG 121 CTTCCTTTTA CACTATACAT AGAGGGGAAT GTAGCTGCAG TTACAGTGGA GAAAGCTAAG 181 GGAGATGGAT TTATGGTTTT CTTGTTGATT GGTAATGCCA CAGTTGCTTA TTTGGTGAAC 241 TTGACTAATT TCTTGGTTAC TAAGCATACA AGTGCCTTGA CACTGCAAGT TTTGGGGAAT 301 GCCAAGGCTG CAGTGGCTGC AGTGGTGTCA GTTTTGATAT TCAGGAATCC AGTGAACATC 361 ATGGGCATAA CAGGATTTGC TGTGACTGTA ATGGGTGTGG TGCTTTACAG TGAGGCAAAG 421 AAGAGATCTA AAGTAACAGC ACACTGATGA TAGTTTGAAA GATTCAATCT TGATGATGCC 481 ACACAAAGGT ACAATTTTTT TTTTGTTTTT GGTCTAATTA GTATTCATTC TGGATGGG Predicted gene structure (within gDNA segment 99599 to 101508): Exon 1 100379 100898 ( 520 n); cDNA 19 538 ( 520 n); score: 0.998 MATCH C08HBa0165B06.1+ SGN-E266638+ 0.998 520 0.967 C PGS_C08HBa0165B06.1+_SGN-E266638+ (100379 100898) Alignment (genomic DNA sequence = upper lines): TTGAAATCTG TTGTTCAGGG GTTGTTGTTA TCCTCTGATG CTGAGAAATT GCACTCTATG 100438 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAATCTG TTGTTCTGGG GTTGTTGTTA TCCTCTGATG CTGAGAAATT GCACTCTATG 78 AATCTGTTAT TATACATGGC TCCAATGGCA GCAATGATTT TGCTTCCTTT TACACTATAC 100498 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCTGTTAT TATACATGGC TCCAATGGCA GCAATGATTT TGCTTCCTTT TACACTATAC 138 ATAGAGGGGA ATGTAGCTGC AGTTACAGTG GAGAAAGCTA AGGGAGATGG ATTTATGGTT 100558 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGAGGGGA ATGTAGCTGC AGTTACAGTG GAGAAAGCTA AGGGAGATGG ATTTATGGTT 198 TTCTTGTTGA TTGGTAATGC CACAGTTGCT TATTTGGTGA ACTTGACTAA TTTCTTGGTT 100618 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGTTGA TTGGTAATGC CACAGTTGCT TATTTGGTGA ACTTGACTAA TTTCTTGGTT 258 ACTAAGCATA CAAGTGCCTT GACACTGCAA GTTTTGGGGA ATGCCAAGGC TGCAGTGGCT 100678 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAAGCATA CAAGTGCCTT GACACTGCAA GTTTTGGGGA ATGCCAAGGC TGCAGTGGCT 318 GCAGTGGTGT CAGTTTTGAT ATTCAGGAAT CCAGTGAACA TCATGGGCAT AACAGGATTT 100738 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGTGGTGT CAGTTTTGAT ATTCAGGAAT CCAGTGAACA TCATGGGCAT AACAGGATTT 378 GCTGTGACTG TAATGGGTGT GGTGCTTTAC AGTGAGGCAA AGAAGAGATC TAAAGTAACA 100798 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTGACTG TAATGGGTGT GGTGCTTTAC AGTGAGGCAA AGAAGAGATC TAAAGTAACA 438 GCACACTGAT GATAGTTTGA AAGATTCAAT CTTGATGATG CCACACAAAG GTACAATTTT 100858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCACACTGAT GATAGTTTGA AAGATTCAAT CTTGATGATG CCACACAAAG GTACAATTTT 498 TTTTTTGTTT TTGGTCTAAT TAGTATTCAT TCTGGATGGG 100898 |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTGTTT TTGGTCTAAT TAGTATTCAT TCTGGATGGG 538 hqPGS_C08HBa0165B06.1+_SGN-E266638+ (100379 100898) ******************************************************************************** EST sequence 163 -strand 772 n (File: SGN-E371799-) 1 ATGAATCTGT TATTATACAT GGCTCCAATG GCAGCAATGA TTTTGCTTCC TTTTACACTA 61 TACATAGAGG GGAATGTAGC TGCAGTTACA GTGGAGAAAG CTAAGGGAGA TGGATTTATG 121 GTTTTCTTGT TGATTGGTAA TGCCACAGTT GCTTATTTGG TGAACTTGAC TAATTTCTTG 181 GTTACTAAGC ATACAAGTGC CTTGACACTG CAAGTTTTGG GGAATGCCAA GGCTGCAGTG 241 GCTGCAGTGG TGTCAGTTTT GATATTCAGG AATCCAGTGA ACATCATGGG CATAACAGGA 301 TTTGCTGTGA CTGTAATGGG TGTGGTGCTT TACAGTGAGG CAAAGAAGAG ATCTAAAGTA 361 ACAGCACACT GATGATAGTT TGAAAGATTC AATCTTGATG ATGCCACACA AAGGTACAAT 421 TTTTTTTTTG TTTTTGGTCT AATTAGTATT CATTCTGGAT GGGGTGGGGG AAGATTAAGT 481 GGTTGGATTA TATTCCACTG TATAGGAACA AAGATGGGGT AAAGTGGAAA AAGGTTTATG 541 TGCTATGCTT TTTTTCCTCT ATATAATTGT TCTTGATTGG GGTTGGTTTG AAGAGAATAA 601 AGTTGTCTCT TTTACTTTTC CCCTTTCTGT AATTTTATAC TCCTTTGATG CAACTACAAC 661 AAAGAAAGAC TGATTCTTTA GATATTGTTC TCTATGTGTA ATATTCTTGT GGGAGAATTG 721 TCCTCCACAA TATATTTTGT CCAAACTCAA GTTTACTTTC CTAAAAAAAA AA Predicted gene structure (within gDNA segment 99826 to 101887): Exon 1 100436 101197 ( 762 n); cDNA 1 763 ( 763 n); score: 0.997 MATCH C08HBa0165B06.1+ SGN-E371799- 0.997 762 0.987 C PGS_C08HBa0165B06.1+_SGN-E371799- (100436 101197) Alignment (genomic DNA sequence = upper lines): ATGAATCTGT TATTATACAT GGCTCCAATG GCAGCAATGA TTTTGCTTCC TTTTACACTA 100495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAATCTGT TATTATACAT GGCTCCAATG GCAGCAATGA TTTTGCTTCC TTTTACACTA 60 TACATAGAGG GGAATGTAGC TGCAGTTACA GTGGAGAAAG CTAAGGGAGA TGGATTTATG 100555 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACATAGAGG GGAATGTAGC TGCAGTTACA GTGGAGAAAG CTAAGGGAGA TGGATTTATG 120 GTTTTCTTGT TGATTGGTAA TGCCACAGTT GCTTATTTGG TGAACTTGAC TAATTTCTTG 100615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTCTTGT TGATTGGTAA TGCCACAGTT GCTTATTTGG TGAACTTGAC TAATTTCTTG 180 GTTACTAAGC ATACAAGTGC CTTGACACTG CAAGTTTTGG GGAATGCCAA GGCTGCAGTG 100675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACTAAGC ATACAAGTGC CTTGACACTG CAAGTTTTGG GGAATGCCAA GGCTGCAGTG 240 GCTGCAGTGG TGTCAGTTTT GATATTCAGG AATCCAGTGA ACATCATGGG CATAACAGGA 100735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGCAGTGG TGTCAGTTTT GATATTCAGG AATCCAGTGA ACATCATGGG CATAACAGGA 300 TTTGCTGTGA CTGTAATGGG TGTGGTGCTT TACAGTGAGG CAAAGAAGAG ATCTAAAGTA 100795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTGTGA CTGTAATGGG TGTGGTGCTT TACAGTGAGG CAAAGAAGAG ATCTAAAGTA 360 ACAGCACACT GATGATAGTT TGAAAGATTC AATCTTGATG ATGCCACACA AAGGTACAAT 100855 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCACACT GATGATAGTT TGAAAGATTC AATCTTGATG ATGCCACACA AAGGTACAAT 420 TTTTTTTTTG TTTTTGGTCT AATTAGTATT CATTCTGGAT GGGGTGGGGG AAGATTAAGT 100915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTG TTTTTGGTCT AATTAGTATT CATTCTGGAT GGGGTGGGGG AAGATTAAGT 480 GGTTGGATTA TATTCCACTG TATAGGAACA AAGATGGGGT AAAGTGGAAA AAGGTTTATG 100975 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTGGATTA TATTCCACTG TATAGGAACA AAGATGGGGT AAAGTGGAAA AAGGTTTATG 540 TGCTATGCTT TTTTTCCTCT ATATAATTGT TCTTGATTGG GGTTGGTTTG AAGAGAATAA 101035 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTATGCTT TTTTTCCTCT ATATAATTGT TCTTGATTGG GGTTGGTTTG AAGAGAATAA 600 AGTTGTCTCT TTTACTTTTC CCCTTTCTGT AATTTTATAC TCCTTTGATG CAACTACAAC 101095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGTCTCT TTTACTTTTC CCCTTTCTGT AATTTTATAC TCCTTTGATG CAACTACAAC 660 AAAGAAAGAC TGATTCTTTA GATATTGTTC TCTATGTGTA ATATTCTTGT GGGAGAATTG 101155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAAGAC TGATTCTTTA GATATTGTTC TCTATGTGTA ATATTCTTGT GGGAGAATTG 720 TCCTCC-CAA TATATTTTGT CCAAACTCAA GTTTACTTTC CTA 101197 |||||| ||| |||||||||| |||||||||| |||||||||| ||| TCCTCCACAA TATATTTTGT CCAAACTCAA GTTTACTTTC CTA 763 hqPGS_C08HBa0165B06.1+_SGN-E371799- (100436 101197) ******************************************************************************** EST sequence 161 -strand 750 n (File: SGN-E372203-) 1 GCTCCAATGG CAGCAATGAT TTTGCTTCCT TTTACACTAT ACATAGAGGG GAATGTAGCT 61 GCAGTTACAG TGGAGAAAGC TAAGGGAGAT GGATTTATGG TTTTCTTGTT GATTGGTAAT 121 GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG TTACTAAGCA TACAAGTGCC 181 TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG CTGCAGTGGT GTCAGTTTTG 241 ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT TTGCTGTGAC TGTAATGGGT 301 GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA CAGCACACTG ATGATAGTTT 361 GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT TTTTTTTTGT TTTTGGTCTA 421 ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG GTTGGATTAT ATTCCACTGT 481 ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT GCTATGCTTT TTTTCCTCTA 541 TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA GTTGTCTCTT TTACTTTTCC 601 CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA AAGAAAGACT GATTCTTTAG 661 ATATTGTTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT CCTCCCAATA TATTTTGTCC 721 AAACTCAAGT TTACTTTCCT AAAAAAAAAA Predicted gene structure (within gDNA segment 99847 to 101887): Exon 1 100457 101197 ( 741 n); cDNA 1 741 ( 741 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E372203- 1.000 741 0.988 C PGS_C08HBa0165B06.1+_SGN-E372203- (100457 101197) Alignment (genomic DNA sequence = upper lines): GCTCCAATGG CAGCAATGAT TTTGCTTCCT TTTACACTAT ACATAGAGGG GAATGTAGCT 100516 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCAATGG CAGCAATGAT TTTGCTTCCT TTTACACTAT ACATAGAGGG GAATGTAGCT 60 GCAGTTACAG TGGAGAAAGC TAAGGGAGAT GGATTTATGG TTTTCTTGTT GATTGGTAAT 100576 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGTTACAG TGGAGAAAGC TAAGGGAGAT GGATTTATGG TTTTCTTGTT GATTGGTAAT 120 GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG TTACTAAGCA TACAAGTGCC 100636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG TTACTAAGCA TACAAGTGCC 180 TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG CTGCAGTGGT GTCAGTTTTG 100696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG CTGCAGTGGT GTCAGTTTTG 240 ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT TTGCTGTGAC TGTAATGGGT 100756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT TTGCTGTGAC TGTAATGGGT 300 GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA CAGCACACTG ATGATAGTTT 100816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA CAGCACACTG ATGATAGTTT 360 GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT TTTTTTTTGT TTTTGGTCTA 100876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT TTTTTTTTGT TTTTGGTCTA 420 ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG GTTGGATTAT ATTCCACTGT 100936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG GTTGGATTAT ATTCCACTGT 480 ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT GCTATGCTTT TTTTCCTCTA 100996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT GCTATGCTTT TTTTCCTCTA 540 TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA GTTGTCTCTT TTACTTTTCC 101056 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA GTTGTCTCTT TTACTTTTCC 600 CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA AAGAAAGACT GATTCTTTAG 101116 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA AAGAAAGACT GATTCTTTAG 660 ATATTGTTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT CCTCCCAATA TATTTTGTCC 101176 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTGTTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT CCTCCCAATA TATTTTGTCC 720 AAACTCAAGT TTACTTTCCT A 101197 |||||||||| |||||||||| | AAACTCAAGT TTACTTTCCT A 741 hqPGS_C08HBa0165B06.1+_SGN-E372203- (100457 101197) ******************************************************************************** EST sequence 162 -strand 666 n (File: SGN-E372036-) 1 AGATGGATTT ATGGTTTTCT TGTTGATTGG TAATGCCACA GTTGCTTATT TGGTGAACTT 61 GACTAATGTC TTGGTTACTA AGCATACAAG TGCCTTGACA CTGCAAGTTT TGGGGAATGC 121 CAAGGCTGCA GTGGCTGCAG TGGTGTCAGT TTTGATATTC AGGAATCCAG TGAACATCAT 181 GGGCATAACA GGATTTGCTG TGCCTGTAAT GGGTGTGGTG CTTTACAGTG AGGCAAAGAA 241 GAGATCTAAA GTAACAGCAC ACTGATGATA GTTTGAAAGA TTCAATCTTG ATGATGCCAC 301 ACAAAGGTAC AATTTTTTTT TTGTTTTTGG TCTAATTAGT ATTCATTCTG GATGGGGTGG 361 GGGAAGATTA AGTGGTTGGA TTATATTCCA CTGTATAGGA ACAAAGATGG GGTAAAGTGG 421 AAAAAGGTTT ATGTGCTATG CTTTTTTTCC TCTATATAAT TGTTCTTGAT TGGGGTTGGT 481 TTGAAGAGAA TAAAGTTGTC TCTGTTACTT TTCCCCTTTC TGTAATTTTA TACTCCTGTG 541 ATGCAACTAC AACAAAGAAA GACTGATTCT TTAGATATTG TTCTTCTATG TGTAATATTC 601 TTGTGGGAGA ATTGTCCTCC CAAATATATT TTGTCCAAAC TCAAGTTTAC TTTCATAAAA 661 AAAAAA Predicted gene structure (within gDNA segment 99933 to 101914): Exon 1 100543 101197 ( 655 n); cDNA 1 657 ( 657 n); score: 0.985 MATCH C08HBa0165B06.1+ SGN-E372036- 0.985 655 0.983 C PGS_C08HBa0165B06.1+_SGN-E372036- (100543 101197) Alignment (genomic DNA sequence = upper lines): AGATGGATTT ATGGTTTTCT TGTTGATTGG TAATGCCACA GTTGCTTATT TGGTGAACTT 100602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGGATTT ATGGTTTTCT TGTTGATTGG TAATGCCACA GTTGCTTATT TGGTGAACTT 60 GACTAATTTC TTGGTTACTA AGCATACAAG TGCCTTGACA CTGCAAGTTT TGGGGAATGC 100662 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTAATGTC TTGGTTACTA AGCATACAAG TGCCTTGACA CTGCAAGTTT TGGGGAATGC 120 CAAGGCTGCA GTGGCTGCAG TGGTGTCAGT TTTGATATTC AGGAATCCAG TGAACATCAT 100722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGCTGCA GTGGCTGCAG TGGTGTCAGT TTTGATATTC AGGAATCCAG TGAACATCAT 180 GGGCATAACA GGATTTGCTG TGACTGTAAT GGGTGTGGTG CTTTACAGTG AGGCAAAGAA 100782 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| GGGCATAACA GGATTTGCTG TGCCTGTAAT GGGTGTGGTG CTTTACAGTG AGGCAAAGAA 240 GAGATCTAAA GTAACAGCAC ACTGATGATA GTTTGAAAGA TTCAATCTTG ATGATGCCAC 100842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCTAAA GTAACAGCAC ACTGATGATA GTTTGAAAGA TTCAATCTTG ATGATGCCAC 300 ACAAAGGTAC AATTTTTTTT TTGTTTTTGG TCTAATTAGT ATTCATTCTG GATGGGGTGG 100902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGGTAC AATTTTTTTT TTGTTTTTGG TCTAATTAGT ATTCATTCTG GATGGGGTGG 360 GGGAAGATTA AGTGGTTGGA TTATATTCCA CTGTATAGGA ACAAAGATGG GGTAAAGTGG 100962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAGATTA AGTGGTTGGA TTATATTCCA CTGTATAGGA ACAAAGATGG GGTAAAGTGG 420 AAAAAGGTTT ATGTGCTATG CTTTTTTTCC TCTATATAAT TGTTCTTGAT TGGGGTTGGT 101022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAGGTTT ATGTGCTATG CTTTTTTTCC TCTATATAAT TGTTCTTGAT TGGGGTTGGT 480 TTGAAGAGAA TAAAGTTGTC TCTTTTACTT TTCCCCTTTC TGTAATTTTA TACTCCTTTG 101082 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||||| || TTGAAGAGAA TAAAGTTGTC TCTGTTACTT TTCCCCTTTC TGTAATTTTA TACTCCTGTG 540 ATGCAACTAC AACAAAGAAA GACTGATTCT TTAGATATTG TTC-TCTATG TGTAATATTC 101141 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| ATGCAACTAC AACAAAGAAA GACTGATTCT TTAGATATTG TTCTTCTATG TGTAATATTC 600 TTGTGGGAGA ATTGTCCTCC C-AATATATT TTGTCCAAAC TCAAGTTTAC TTTCCTA 101197 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||| || TTGTGGGAGA ATTGTCCTCC CAAATATATT TTGTCCAAAC TCAAGTTTAC TTTCATA 657 hqPGS_C08HBa0165B06.1+_SGN-E372036- (100543 101197) ******************************************************************************** EST sequence 50 +strand 645 n (File: SGN-E342288+) 1 TTTTCTTGTT GATTGGTAAT GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG 61 TTACTAAGCA TACAAGTGCC TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG 121 CTGCAGTGGT GTCAGTTTTG ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT 181 TTGCTGTGAC TGTAATGGGT GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA 241 CAGCACACTG ATGATAGTTT GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT 301 TTTTTTTTGT TTTTGGTCTA ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG 361 GTTGGATTAT ATTCCACTGT ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT 421 GCTATGCTTT TTTTCCTCTA TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA 481 GTTGTCTCTT TTACTTTTCC CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA 541 AAGAAAGACT GATTCTTTAG ATATTGGTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT 601 CCTCCAATAT ATTTTGTCCA AACTCAAGTT TACTTTAAAA AAAAA Predicted gene structure (within gDNA segment 99957 to 101893): Exon 1 100557 101193 ( 637 n); cDNA 1 636 ( 636 n); score: 0.997 MATCH C08HBa0165B06.1+ SGN-E342288+ 0.997 637 0.988 C PGS_C08HBa0165B06.1+_SGN-E342288+ (100557 101193) Alignment (genomic DNA sequence = upper lines): TTTTCTTGTT GATTGGTAAT GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG 100616 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCTTGTT GATTGGTAAT GCCACAGTTG CTTATTTGGT GAACTTGACT AATTTCTTGG 60 TTACTAAGCA TACAAGTGCC TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG 100676 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACTAAGCA TACAAGTGCC TTGACACTGC AAGTTTTGGG GAATGCCAAG GCTGCAGTGG 120 CTGCAGTGGT GTCAGTTTTG ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT 100736 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAGTGGT GTCAGTTTTG ATATTCAGGA ATCCAGTGAA CATCATGGGC ATAACAGGAT 180 TTGCTGTGAC TGTAATGGGT GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA 100796 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTGTGAC TGTAATGGGT GTGGTGCTTT ACAGTGAGGC AAAGAAGAGA TCTAAAGTAA 240 CAGCACACTG ATGATAGTTT GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT 100856 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCACACTG ATGATAGTTT GAAAGATTCA ATCTTGATGA TGCCACACAA AGGTACAATT 300 TTTTTTTTGT TTTTGGTCTA ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG 100916 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTGT TTTTGGTCTA ATTAGTATTC ATTCTGGATG GGGTGGGGGA AGATTAAGTG 360 GTTGGATTAT ATTCCACTGT ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT 100976 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGATTAT ATTCCACTGT ATAGGAACAA AGATGGGGTA AAGTGGAAAA AGGTTTATGT 420 GCTATGCTTT TTTTCCTCTA TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA 101036 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATGCTTT TTTTCCTCTA TATAATTGTT CTTGATTGGG GTTGGTTTGA AGAGAATAAA 480 GTTGTCTCTT TTACTTTTCC CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA 101096 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCTCTT TTACTTTTCC CCTTTCTGTA ATTTTATACT CCTTTGATGC AACTACAACA 540 AAGAAAGACT GATTCTTTAG ATATTGTTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT 101156 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| AAGAAAGACT GATTCTTTAG ATATTGGTCT CTATGTGTAA TATTCTTGTG GGAGAATTGT 600 CCTCCCAATA TATTTTGTCC AAACTCAAGT TTACTTT 101193 ||| |||||| |||||||||| |||||||||| ||||||| CCT-CCAATA TATTTTGTCC AAACTCAAGT TTACTTT 636 hqPGS_C08HBa0165B06.1+_SGN-E342288+ (100557 101193) ******************************************************************************** EST sequence 138 -strand 421 n (File: SGN-E234013-) 1 AGTGAACATC ATGGGCATAA CAGGATTTGC TGTGACTGTA ATGGGTGTGG TGCTTTACAG 61 TGAGGCAAAG AAGAGATCTA AAGTAACAGC ACACTGATGA TAGTTTGAAA GATTCAATCT 121 TGATGATGCC ACACAAAGGT ACAATTTTTT TTTTGTTTTT GGTCTAATTA GTATTCATTC 181 TGGATGGGGT GGGGGAAGAT TAAGTGGTTG GATTATATTC CACTGTATAG GAACAAAGAT 241 GGGGTAAAGT GGAAAAAGGT TTATGTGCTA TGCTTTTTTT CCTCTATATA ATTGTTCTTG 301 ATTGGGGTTG GTTTGAAGAG AATAAAGTTG TCTCTTTTAC TTTTCCCCTT TCTGTAATTT 361 TATACTCCTT TGATGCAACT ACAACAAAGA AAGACTGATT CTTTAAGAAA AAAAAAAAAA 421 A Predicted gene structure (within gDNA segment 100101 to 101875): Exon 1 100711 101115 ( 405 n); cDNA 1 405 ( 405 n); score: 1.000 PPA cDNA 406 421 MATCH C08HBa0165B06.1+ SGN-E234013- 1.000 405 0.962 C PGS_C08HBa0165B06.1+_SGN-E234013- (100711 101115) Alignment (genomic DNA sequence = upper lines): AGTGAACATC ATGGGCATAA CAGGATTTGC TGTGACTGTA ATGGGTGTGG TGCTTTACAG 100770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAACATC ATGGGCATAA CAGGATTTGC TGTGACTGTA ATGGGTGTGG TGCTTTACAG 60 TGAGGCAAAG AAGAGATCTA AAGTAACAGC ACACTGATGA TAGTTTGAAA GATTCAATCT 100830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGCAAAG AAGAGATCTA AAGTAACAGC ACACTGATGA TAGTTTGAAA GATTCAATCT 120 TGATGATGCC ACACAAAGGT ACAATTTTTT TTTTGTTTTT GGTCTAATTA GTATTCATTC 100890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGATGCC ACACAAAGGT ACAATTTTTT TTTTGTTTTT GGTCTAATTA GTATTCATTC 180 TGGATGGGGT GGGGGAAGAT TAAGTGGTTG GATTATATTC CACTGTATAG GAACAAAGAT 100950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATGGGGT GGGGGAAGAT TAAGTGGTTG GATTATATTC CACTGTATAG GAACAAAGAT 240 GGGGTAAAGT GGAAAAAGGT TTATGTGCTA TGCTTTTTTT CCTCTATATA ATTGTTCTTG 101010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTAAAGT GGAAAAAGGT TTATGTGCTA TGCTTTTTTT CCTCTATATA ATTGTTCTTG 300 ATTGGGGTTG GTTTGAAGAG AATAAAGTTG TCTCTTTTAC TTTTCCCCTT TCTGTAATTT 101070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGGGTTG GTTTGAAGAG AATAAAGTTG TCTCTTTTAC TTTTCCCCTT TCTGTAATTT 360 TATACTCCTT TGATGCAACT ACAACAAAGA AAGACTGATT CTTTA 101115 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TATACTCCTT TGATGCAACT ACAACAAAGA AAGACTGATT CTTTA 405 hqPGS_C08HBa0165B06.1+_SGN-E234013- (100711 101115) ******************************************************************************** EST sequence 294 +strand 728 n (File: SGN-E332291+) 1 TCGCTTCTCT TCTTCTGCTT CTTCCAATTC TTTCTCGGTT TTCTATGCAC TGACTAGGCC 61 TTTTCCTTCT CCATTATCAT CGATTCCAGT GTTTTTTTTT TCTTTCTTAT CTCGTTCCTC 121 AAGATCACAA TCGCTGTGTG AGAAAATCAC GCTTGAGTTT CTATTTTCAA AATCGGCGGT 181 TATCGGAAAC TGTGCGATTG GAGAAATGGA GGAAGAAATG GAGGATATGG TTGAGTATAC 241 TTTTACAGCG GTGGAGATTG ACCTCGATTA CGAGTTTGAT GCACCTCGTT ACTTTGATTT 301 AGGTTGTGAA GAGGCTTTGC CTGAGACTCG TCAAGCTGAG AGTTGGTTTG AATCTGCCGG 361 AAGCTATCCG CCTTCTCCCT TCGTCACTAG GTTAATTTCG AAGGAGGACA GTTTCCTGGA 421 GAACATTCAT GTATCTCCGA AATCCAAAGT TGTGAATATG AGTTTGTCTG GGAGTGATTC 481 TGATATTGAG GTTGAGCAAG AGGTTCCTGC TGTAATGGAA GAAGGCGTGG GCAACAATGC 541 AGAAATTTCT GCTAACTTAN GAATTAGCAA CGCTGAGAAA CTTTTAAATC AGCTGAGACA 601 GCTTCCTTCA GGGTTGACTT TCTACAATCA CACGGCTACA GGTGCCACTG CCACAACAGG 661 TAAAACAAGG TGCTCAGGGA AAGCATCATG TCCCANGGGN NTCAACCCTC ATGAAACCAA 721 CCCGCAGT Predicted gene structure (within gDNA segment 115254 to 111288): Exon 1 114654 114278 ( 377 n); cDNA 1 377 ( 377 n); score: 1.000 Intron 1 114277 113406 ( 872 n); Pd: 0.998 (s: 1.00), Pa: 0.903 (s: 1.00) Exon 2 113405 113262 ( 144 n); cDNA 378 521 ( 144 n); score: 1.000 Intron 2 113261 112767 ( 495 n); Pd: 0.978 (s: 1.00), Pa: 0.999 (s: 0.98) Exon 3 112766 112677 ( 90 n); cDNA 522 611 ( 90 n); score: 0.989 Intron 3 112676 112438 ( 239 n); Pd: 0.986 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 4 112437 112322 ( 116 n); cDNA 612 728 ( 117 n); score: 0.918 MATCH C08HBa0165B06.1- SGN-E332291+ 0.986 727 0.999 C PGS_C08HBa0165B06.1-_SGN-E332291+ (114654 114278,113405 113262,112766 112677,112437 112322) Alignment (genomic DNA sequence = upper lines): TCGCTTCTCT TCTTCTGCTT CTTCCAATTC TTTCTCGGTT TTCTATGCAC TGACTAGGCC 114595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGCTTCTCT TCTTCTGCTT CTTCCAATTC TTTCTCGGTT TTCTATGCAC TGACTAGGCC 60 TTTTCCTTCT CCATTATCAT CGATTCCAGT GTTTTTTTTT TCTTTCTTAT CTCGTTCCTC 114535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTTCT CCATTATCAT CGATTCCAGT GTTTTTTTTT TCTTTCTTAT CTCGTTCCTC 120 AAGATCACAA TCGCTGTGTG AGAAAATCAC GCTTGAGTTT CTATTTTCAA AATCGGCGGT 114475 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATCACAA TCGCTGTGTG AGAAAATCAC GCTTGAGTTT CTATTTTCAA AATCGGCGGT 180 TATCGGAAAC TGTGCGATTG GAGAAATGGA GGAAGAAATG GAGGATATGG TTGAGTATAC 114415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGGAAAC TGTGCGATTG GAGAAATGGA GGAAGAAATG GAGGATATGG TTGAGTATAC 240 TTTTACAGCG GTGGAGATTG ACCTCGATTA CGAGTTTGAT GCACCTCGTT ACTTTGATTT 114355 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTACAGCG GTGGAGATTG ACCTCGATTA CGAGTTTGAT GCACCTCGTT ACTTTGATTT 300 AGGTTGTGAA GAGGCTTTGC CTGAGACTCG TCAAGCTGAG AGTTGGTTTG AATCTGCCGG 114295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTGTGAA GAGGCTTTGC CTGAGACTCG TCAAGCTGAG AGTTGGTTTG AATCTGCCGG 360 AAGCTATCCG CCTTCTCGTG AGTTTTTTTT TTTTTTTTTT TTAACGGTGC TAAATTTTGG 114235 |||||||||| ||||||| AAGCTATCCG CCTTCTC... .......... .......... .......... .......... 377 TGTTTATTTG ATTTATTAGA ACTTGTATTT TATTTTCCTG CAATTTCTAA GCTGTATTTG 114175 .......... .......... .......... .......... .......... .......... 377 TTAAGGAACT AGTGTTAAAA CGATTTGATT AGACGTTGTC TGTATTTTTG CATCGAAGCT 114115 .......... .......... .......... .......... .......... .......... 377 GTTTGTGTAT GATTCAGAAC CCGTGACTCA CAGGTCGCTT TTTAGGATCA ACTTCTTATG 114055 .......... .......... .......... .......... .......... .......... 377 GTGCGATGAT GCCAATGCTA TATTTTTCAC GTTATGTATT TTGTATTTTT TCGCTTTTTA 113995 .......... .......... .......... .......... .......... .......... 377 CCGACAATAT TTTAGCTTTT TCCTGTTCAT CTGGTTTTGA AAATATTTAT ATTTTTGTAA 113935 .......... .......... .......... .......... .......... .......... 377 CTAATGTAGT AAAAGCTTAG CCTGGTGCAA TGAGCTCTAG CAATGGACTG TGTCCGGGCA 113875 .......... .......... .......... .......... .......... .......... 377 AAAGCCTGAC CACAATTGTC TACTGTAGGT AACCTTATAC TGCATTTTTG CGAGCGGCCA 113815 .......... .......... .......... .......... .......... .......... 377 TTTACGTATC TCGAACCTGT GACTTTTTAG TGGCATAACT GTGGTAGTAT ATGGGAAAAT 113755 .......... .......... .......... .......... .......... .......... 377 TCTGTGTTTT CTCACCTTTT TTATTTCTAC TTAAGTTTTG GAAGATTTTA GTTTAGAACT 113695 .......... .......... .......... .......... .......... .......... 377 GTCTTTAACT CTCTGCTATA GGAGCTACGT TCTAATTAAA GGAGCTGGTA TCTCATGTAT 113635 .......... .......... .......... .......... .......... .......... 377 ACTATTTTCC TTGATGTACT GAGCATTATA AGACACTGTT TCCTTTTCTG TTTGTTCTTT 113575 .......... .......... .......... .......... .......... .......... 377 GCTTTGGTTT TGGTAAAGGA CCTCCTAACA TTCCTTAGGT TAAAGGCCAT TCTAGTAAAA 113515 .......... .......... .......... .......... .......... .......... 377 CTAAAATTTG GAATGTAAAT AACACTTGTG TTTTAATTAT CACTTCCGTG CTAGAACATT 113455 .......... .......... .......... .......... .......... .......... 377 GTTTTTGGAA CAATATGACT GATAATACAT TTGTTGTCTG TTATTCAAGC CTTCGTCACT 113395 | |||||||||| .......... .......... .......... .......... .........C CTTCGTCACT 388 AGGTTAATTT CGAAGGAGGA CAGTTTCCTG GAGAACATTC ATGTATCTCC GAAATCCAAA 113335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTAATTT CGAAGGAGGA CAGTTTCCTG GAGAACATTC ATGTATCTCC GAAATCCAAA 448 GTTGTGAATA TGAGTTTGTC TGGGAGTGAT TCTGATATTG AGGTTGAGCA AGAGGTTCCT 113275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTGAATA TGAGTTTGTC TGGGAGTGAT TCTGATATTG AGGTTGAGCA AGAGGTTCCT 508 GCTGTAATGG AAGGTGTTTA TTCTGCCTCT TTTAAAGTTA AAACTCTCAT CTTTTACTTG 113215 |||||||||| ||| GCTGTAATGG AAG....... .......... .......... .......... .......... 521 AATTTTGTGC TTTGCTGTTT TAAGGGTGAT GTATTATTTT CATTGTTGTT GAACATTTGC 113155 .......... .......... .......... .......... .......... .......... 521 TTTTAGAAGT TCATAATCAA TTTGGATATC CCATATTTTT GCATGTGGAA GTATCCAATT 113095 .......... .......... .......... .......... .......... .......... 521 GACCGAAAAT TTACTGAAAT GCAAGCTAGT TCTTGACATT AATTATGACT CTTGAGATAA 113035 .......... .......... .......... .......... .......... .......... 521 GTAGAAGGTA AAGCTAATAA GAGTCCAAAG GGAACAATTG GTTCCTTCAC CCAACGCTGA 112975 .......... .......... .......... .......... .......... .......... 521 TGAACTGAGT AATTTATCCA CTTGGTCCTC CTTCTGCTTG ATGTATTTTT TTTGTTTTCC 112915 .......... .......... .......... .......... .......... .......... 521 TCGAAAAGAT TTAGTGTTTT TCATAGTTGT TTACTTTAAT TATAAGCTGG CTTTCAGGAT 112855 .......... .......... .......... .......... .......... .......... 521 ATGCCACAAC TTTCTTGTAC TGATGTTGAT ACTAGTAGTT GGTATCATTC TGATATACTC 112795 .......... .......... .......... .......... .......... .......... 521 AATTTTTCTG TCTGATCTTA TTTTGCAGAA GGCGTGGGCA ACAATGCAGA AATTTCTGCT 112735 || |||||||||| |||||||||| |||||||||| .......... .......... ........AA GGCGTGGGCA ACAATGCAGA AATTTCTGCT 553 AACTTAGGAA TTAGCAACGC TGAGAAACTT TTAAATCAGC TGAGACAGCT TCCTTCAGGT 112675 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AACTTANGAA TTAGCAACGC TGAGAAACTT TTAAATCAGC TGAGACAGCT TCCTTCAG.. 611 GCATATCTAA TTTGACAATT GTAAATGTCT GCATCAATGT TTGTCTTAAT GAACTATCTT 112615 .......... .......... .......... .......... .......... .......... 611 TGAAATGTTT AATATTCTAC TACTAGAATT AAGAATATAT TTTTGTCCTG TGTCATGGTT 112555 .......... .......... .......... .......... .......... .......... 611 CAAGTTGGTT GCTTGAGTGA TAAGTATGTG ATTTGAATAG GCAATCATGT TACAATAGGT 112495 .......... .......... .......... .......... .......... .......... 611 ACAACAGTTT TGTCATGCAA CCATGTTACA CTAATATTTG ATGCATTTGA TTGGCAGGGT 112435 ||| .......... .......... .......... .......... .......... .......GGT 614 TGACTTTCTA CAATCACACG GCTACAGGTG CCACTGCCAC AACAGGTAAA ACAAGGTGCT 112375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACTTTCTA CAATCACACG GCTACAGGTG CCACTGCCAC AACAGGTAAA ACAAGGTGCT 674 CAGGGAAGCC ATCATGTCCC A-GGGGTTCA ACCCTCATGA AACCAACCGC AAGT 112322 ||||||| | |||||||||| | ||| ||| |||||||||| |||||||| ||| CAGGGAAAGC ATCATGTCCC ANGGGNNTCA ACCCTCATGA AACCAACCCG CAGT 728 hqPGS_C08HBa0165B06.1-_SGN-E332291+ (114654 114278,113405 113262,112766 112677,112437 112322) ******************************************************************************** EST sequence 101 +strand 642 n (File: SGN-E321736+) 1 AGAGCTTCTG AAGACCCTTA TGATGAGTCG AGTAATCCAT ATGGTGTTAT TCAGCTAGGA 61 TTAGCAGAAA ACAAGTTGTC ACTGGATTTA GTTCAAGAAT GGCTAGCAGA AAATGTGTCA 121 AGATGGATGA TGACTCAAGA TTCGAGTATA ACCGGAATAG CTACTTATCA GCCATTTGAC 181 GGGTTATTGG AGCTGAAAGT GGCTGTGGGA GAATTTATGT CTCAAGCTCT AGAGAGATCA 241 GTGTCCTTCA GCCCCTCACA AATGGTTCTT ACCGGTGGTG CAACTCCTGC GCTTGAGATA 301 CTGAGCTTCT GCCTAGCTGA TCCTGGAAAT GCTTTTCTTG TTCCCTCACC ATATTATCCT 361 GATCTTGATA GGGATGTCAA GTGGAGAACT GGAGTGGAGA TTATACCTGT TCCTTGCCGC 421 AGTGCAGACA ACTTTAACTT GAGCATTGAT GCTCTTGACC GAGCTTTTAA CCAAGCTAAG 481 AAACGTGGTC TTAAAGTACG AGGGATTATC ATTTCTAACC CCTCGAATCC TGTGGGCAAT 541 ATTTTCTCTA NGGAGACACT TTATAACCTC TTAGACTTTA CAACTGAGAA GAACATCCAT 601 GTAATATCCA ATGAAATCTT GGCAGGGTCA ACTTATGGAA AT Predicted gene structure (within gDNA segment 120915 to 124308): Exon 1 121515 121589 ( 75 n); cDNA 1 75 ( 75 n); score: 0.987 Intron 1 121590 121743 ( 154 n); Pd: 0.999 (s: 0.98), Pa: 0.996 (s: 1.00) Exon 2 121744 121869 ( 126 n); cDNA 76 201 ( 126 n); score: 1.000 Intron 2 121870 123170 (1301 n); Pd: 0.988 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 123171 123331 ( 161 n); cDNA 202 362 ( 161 n); score: 1.000 Intron 3 123332 123418 ( 87 n); Pd: 1.000 (s: 1.00), Pa: 0.996 (s: 1.00) Exon 4 123419 123698 ( 280 n); cDNA 363 642 ( 280 n); score: 0.996 MATCH C08HBa0165B06.1+ SGN-E321736+ 0.997 642 1.000 C PGS_C08HBa0165B06.1+_SGN-E321736+ (121515 121589,121744 121869,123171 123331,123419 123698) Alignment (genomic DNA sequence = upper lines): AGAGCTTCTG AAGACCCTTA TGATGAGTCG AGTAATCCAG ATGGTGTTAT TCAGCTAGGA 121574 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGAGCTTCTG AAGACCCTTA TGATGAGTCG AGTAATCCAT ATGGTGTTAT TCAGCTAGGA 60 TTAGCAGAAA ACAAGGTAAT AATTTTGAAT ATTTGGATAT ATTGAATCAT TTTCTAGAGA 121634 |||||||||| ||||| TTAGCAGAAA ACAAG..... .......... .......... .......... .......... 75 AATGTACCAA ATGCAATACG TTTCTTGTTG GGAAGTGAAT TTTTTTCCTT TCTACTTTGG 121694 .......... .......... .......... .......... .......... .......... 75 TTTGTTGTTT TGATGATTTT GAATTTTGTC TCTATTTGTA TGGTTACAGT TGTCACTGGA 121754 | |||||||||| .......... .......... .......... .......... .........T TGTCACTGGA 86 TTTAGTTCAA GAATGGCTAG CAGAAAATGT GTCAAGATGG ATGATGACTC AAGATTCGAG 121814 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGTTCAA GAATGGCTAG CAGAAAATGT GTCAAGATGG ATGATGACTC AAGATTCGAG 146 TATAACCGGA ATAGCTACTT ATCAGCCATT TGACGGGTTA TTGGAGCTGA AAGTGGTAAG 121874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TATAACCGGA ATAGCTACTT ATCAGCCATT TGACGGGTTA TTGGAGCTGA AAGTG..... 201 CTTTTTAGTT TTTCCTTGCA TACTAAGATG GTTCTTCTTG AACTATTCAA TTACTAGTAG 121934 .......... .......... .......... .......... .......... .......... 201 TTGTTCATAT GGTTAATAGT TTTTACAGGC TAGAGAAGGA AATTGAACAA AAAAATTGCT 121994 .......... .......... .......... .......... .......... .......... 201 TGAAAAGGTT TGTAAAAACT TAAAGTTGGT AATTTGAATC AAGACTTTAT AGGAATAAAT 122054 .......... .......... .......... .......... .......... .......... 201 CAATGAGATA CCTTTTCAGG TGGTATTAGT TTATAATTAT TACCTAGGAT GGACTCATGT 122114 .......... .......... .......... .......... .......... .......... 201 CATGTCTATA TGCTTGTATA ACAGTTACTC CATATCAATT ATCACCCATC CTCTAGTTCT 122174 .......... .......... .......... .......... .......... .......... 201 GTGTGCTTTA TCGCTGATTT AATTTGAAAT GTGAATCCCT GGCTGTGGAT CGGTAATGGC 122234 .......... .......... .......... .......... .......... .......... 201 ATTTGACAAT CCCAAAGTTA CCTTTCGTAT ACAAGGGTAT TGTATGTCCC ATCTTGAGCT 122294 .......... .......... .......... .......... .......... .......... 201 TTCTAAGTGT ATAAAGTACA ACAGACATAA GGAAAAGCAA TGGTAAGCTT CACTTTCATT 122354 .......... .......... .......... .......... .......... .......... 201 TTACAGTGCA ACTGACAATT AACTTCTGAA AAGTTTGTCA ACGCTTTAAC TTCTACGCTA 122414 .......... .......... .......... .......... .......... .......... 201 TCGACGCTAA TTATCATTTT GGAAAAATAA ACACTGCTCT GAATGTTTTA TAGAAATGAT 122474 .......... .......... .......... .......... .......... .......... 201 AGGAAAATTT TGAAACCTGA GAATGTGTGT GACCAGACAA AGCACCAAAA CCGTATCCAG 122534 .......... .......... .......... .......... .......... .......... 201 AGGGTAATTA AATTGTTAAA CTTCTCCTAC TTGAACATTA CATTGGTAAA ACTTGAGTGG 122594 .......... .......... .......... .......... .......... .......... 201 AAACACGTAA TTGTTGTGGA TCTAGCTCAG ATATTTATGT TGTTTCAGCT TTTGATAATT 122654 .......... .......... .......... .......... .......... .......... 201 GTCTATGGTG GTGTTTGTGC TGACCAGAAA AATAGGACCT TGCAGTGTGA TATGATAAAA 122714 .......... .......... .......... .......... .......... .......... 201 AAATCTAGAT TTCGATATTT CATCACATTA GAGAATAGTT TGACCTGCTT TATTCTGCAT 122774 .......... .......... .......... .......... .......... .......... 201 GGTTTTTGTT ATAAGCAAGT TAATAGTGAA TAATGGACTC AGTTGTTCTG AGAGGTGGCC 122834 .......... .......... .......... .......... .......... .......... 201 TATTATTTCC TTGATTAATA CTCACCTTGA TACTCATCAC TGTGTAACTT ATCGAAGGAC 122894 .......... .......... .......... .......... .......... .......... 201 TATTGCTAGA TTTGCCTGTT GAAGATGGAA GGCAATTTTG GCCTCTTTGA AATATCAGTT 122954 .......... .......... .......... .......... .......... .......... 201 GGCTACCTTT GTCATCAGGT ATCATATGGG TGGGAGATGA TCTGATGGAT TTGCCTTTTA 123014 .......... .......... .......... .......... .......... .......... 201 AAATTGCGTG TTTGAGAATT GTATGACAGC AACATATGAA ATTATCTTTG AGCCACTATG 123074 .......... .......... .......... .......... .......... .......... 201 ATGATTGATT CATAAAAACA ATAAGTGTTT TGTGTGATTC TACATAATTA TGGAATCTCT 123134 .......... .......... .......... .......... .......... .......... 201 TTGAAATGAT TTTTATGTTT TCTCACCTGT ATGCAGGCTG TGGGAGAATT TATGTCTCAA 123194 |||| |||||||||| |||||||||| .......... .......... .......... ......GCTG TGGGAGAATT TATGTCTCAA 225 GCTCTAGAGA GATCAGTGTC CTTCAGCCCC TCACAAATGG TTCTTACCGG TGGTGCAACT 123254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTAGAGA GATCAGTGTC CTTCAGCCCC TCACAAATGG TTCTTACCGG TGGTGCAACT 285 CCTGCGCTTG AGATACTGAG CTTCTGCCTA GCTGATCCTG GAAATGCTTT TCTTGTTCCC 123314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGCGCTTG AGATACTGAG CTTCTGCCTA GCTGATCCTG GAAATGCTTT TCTTGTTCCC 345 TCACCATATT ATCCTGAGTA AGTCTCATTC TCCCTCAAAG AAATTTCGAT CTTTTGGTCA 123374 |||||||||| ||||||| TCACCATATT ATCCTGA... .......... .......... .......... .......... 362 TTTTTACGTA TTTAGTGTAT AAAATGAGCT CAATGCATTT GCAGTCTTGA TAGGGATGTC 123434 |||||| |||||||||| .......... .......... .......... .......... ....TCTTGA TAGGGATGTC 378 AAGTGGAGAA CTGGAGTGGA GATTATACCT GTTCCTTGCC GCAGTGCAGA CAACTTTAAC 123494 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGGAGAA CTGGAGTGGA GATTATACCT GTTCCTTGCC GCAGTGCAGA CAACTTTAAC 438 TTGAGCATTG ATGCTCTTGA CCGAGCTTTT AACCAAGCTA AGAAACGTGG TCTTAAAGTA 123554 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGCATTG ATGCTCTTGA CCGAGCTTTT AACCAAGCTA AGAAACGTGG TCTTAAAGTA 498 CGAGGGATTA TCATTTCTAA CCCCTCGAAT CCTGTGGGCA ATATTTTCTC TAGGGAGACA 123614 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| CGAGGGATTA TCATTTCTAA CCCCTCGAAT CCTGTGGGCA ATATTTTCTC TANGGAGACA 558 CTTTATAACC TCTTAGACTT TACAACTGAG AAGAACATCC ATGTAATATC CAATGAAATC 123674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTATAACC TCTTAGACTT TACAACTGAG AAGAACATCC ATGTAATATC CAATGAAATC 618 TTGGCAGGGT CAACTTATGG AAAT 123698 |||||||||| |||||||||| |||| TTGGCAGGGT CAACTTATGG AAAT 642 hqPGS_C08HBa0165B06.1+_SGN-E321736+ (121515 121589,121744 121869,123171 123331,123419 123698) ******************************************************************************** EST sequence 92 +strand 669 n (File: SGN-E333292+) 1 AATTCGACCA ACTATTTGCC ACCATTTTCT CCAAATCTCT TCTCCATCAC TCACCTCCCT 61 TTGTATTCTC CGTCCACCAC CATCTCGCCG GCCAGGTAGC TGACTGACGT CATACTCCGA 121 CAAGGTGACG TCTTTCTCTA CGCCTCCACT ATGTCACAGT TATGACAAGG TCACGGAACC 181 GTTCACCAAC CAGAACAACA ACCATTTCAA CTGGCGGCGC CGGCGGCAGA GACGGAGGAG 241 GAGCCACGAC GGCGATGAGG GTGATAGTAC CCTTACAAGG TGTAGTACAA GGTCGGGGTG 301 GTCTTTTCTT AGGTTCAGTA ATACCCTGTG CTCTTTTTTA TTTTTGGCAA CTCTACCTAA 361 AACGAAATCG TTCCTCCGGT GGTGACAATA ACGGCGAATC TACGGCACCG GCGAGGTCAC 421 CGTCGTCGAC CCATTTGCCA GAAGTGTCTT CTGGGTCTGG GTTACAAAGG GTTCATTCAC 481 GTCTGTTATT GTCACCGAAG GGAACTACTG GGCAATCTCA GGTATCTGCT AGAGCTAATT 541 CGATTATTTC TAAACAAATT GATAGTAGCC CTTACTATGT TGGATTGAAA AGAGCTTCTG 601 AAGACCCTTA TGATGAGTCG AGTAATCCAG ATGGGTGTAT TCAGCTAGGA TTAGCAGAAA 661 ACAAGTTGT Predicted gene structure (within gDNA segment 120325 to 122239): Exon 1 120925 121589 ( 665 n); cDNA 1 665 ( 665 n); score: 0.995 MATCH C08HBa0165B06.1+ SGN-E333292+ 0.995 665 0.994 C PGS_C08HBa0165B06.1+_SGN-E333292+ (120925 121589) Alignment (genomic DNA sequence = upper lines): AATTCGACCA ACTATTTGCC ACCATTTTCT CCAAATCTCT TCTCCATCAC TCACCTCCCT 120984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTCGACCA ACTATTTGCC ACCATTTTCT CCAAATCTCT TCTCCATCAC TCACCTCCCT 60 TTGTATTCTC CGTCCACCAC CATCTCGCCG GCCAGGTAGC TGACTGACGT CATACTCCGA 121044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTATTCTC CGTCCACCAC CATCTCGCCG GCCAGGTAGC TGACTGACGT CATACTCCGA 120 CAAGGTGACG TCTTTCTCTA CGCCTCCACT ATGTCACAGT TATGACAAGG TCACGGAACC 121104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGTGACG TCTTTCTCTA CGCCTCCACT ATGTCACAGT TATGACAAGG TCACGGAACC 180 GTTCACCAAC CAGAACAACA ACCATTTCAA CTGGCGGCGC CGGCGGCAGA GACGGAGGAG 121164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCACCAAC CAGAACAACA ACCATTTCAA CTGGCGGCGC CGGCGGCAGA GACGGAGGAG 240 GAGCCACGAC GGCGATGAGG GTGATAGTAC CCTTACAAGG TGTAGTACAA GGTCGGGGTG 121224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCCACGAC GGCGATGAGG GTGATAGTAC CCTTACAAGG TGTAGTACAA GGTCGGGGTG 300 GTCTTTTCTT AGGTTCAGTA ATACCCTGTG CTCTTTTTTA TTTTTGGCAA CTCTACCTAA 121284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTTTCTT AGGTTCAGTA ATACCCTGTG CTCTTTTTTA TTTTTGGCAA CTCTACCTAA 360 AACGAAATCG TTCCTCCGGT GGTGACAATA ACGGCGAATC TACGGCACCG GCGAGGTCAC 121344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGAAATCG TTCCTCCGGT GGTGACAATA ACGGCGAATC TACGGCACCG GCGAGGTCAC 420 CGTCGTCGAC CCATTTGCCA GAAGTGTCTT CTGGGTCTGG GTTACAAAGG GTTCATTCAC 121404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCGTCGAC CCATTTGCCA GAAGTGTCTT CTGGGTCTGG GTTACAAAGG GTTCATTCAC 480 GTCTGTTATT GTCACCGAAG GGAACTACTG GGCAATCTCA GGTATCTGCT AGAGCTAATT 121464 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTGTTATT GTCACCGAAG GGAACTACTG GGCAATCTCA GGTATCTGCT AGAGCTAATT 540 CGATTATTTC TAAACAAATT GATAGTAGCC CTTACTATGT TGGATTGAAA AGAGCTTCTG 121524 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATTATTTC TAAACAAATT GATAGTAGCC CTTACTATGT TGGATTGAAA AGAGCTTCTG 600 AAGACCCTTA TGATGAGTCG AGTAATCCAG ATGGTGTTAT TCAGCTAGGA TTAGCAGAAA 121584 |||||||||| |||||||||| |||||||||| |||| ||| |||||||||| |||||||||| AAGACCCTTA TGATGAGTCG AGTAATCCAG ATGGGTGTAT TCAGCTAGGA TTAGCAGAAA 660 ACAAG 121589 ||||| ACAAG 665 hqPGS_C08HBa0165B06.1+_SGN-E333292+ (120925 121589) ******************************************************************************** EST sequence 24 +strand 450 n (File: SGN-E278998+) 1 ACTCACCTCC CTTTGTATTC TCCGTCCACC ACCATCTCGC CGGCCAGGTA GCTGACTGAC 61 GTCATACTCC GACAAGGTGA CGTCTTTCTC TACGCCTCCA CTATGTCACA GTTATGACAA 121 GGTCACGGAA CCGTTCACCA ACCAGAACAA CAACCATTTC AACTGGCGGC GCCGGCGGCA 181 GAGACGGAGG AGGAGCCACG ACGGCGATGA GGGTGATAGT ACCCTTACAA GGTGTAGTAC 241 AAGGTCGGGG TGGTCTTTTC TTAGGTTCAG TAATACCCTG TGCTCTTTTT TATTTTTGGC 301 AACTCTACCT AAAACGAAAT CGTTCCTCCG GTGGTGACAA TAACGGCGAA TCTACGGCAC 361 CGGCGAGGTC ACCGTCGTCG ACCCATTTGC CAGAAGTGTC TTCTGGGTCT GGGTTACAAA 421 GGGTTCATTC ACGTCTGTTA TTGTCACCGA Predicted gene structure (within gDNA segment 120373 to 122032): Exon 1 120973 121422 ( 450 n); cDNA 1 450 ( 450 n); score: 1.000 MATCH C08HBa0165B06.1+ SGN-E278998+ 1.000 450 1.000 C PGS_C08HBa0165B06.1+_SGN-E278998+ (120973 121422) Alignment (genomic DNA sequence = upper lines): ACTCACCTCC CTTTGTATTC TCCGTCCACC ACCATCTCGC CGGCCAGGTA GCTGACTGAC 121032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCACCTCC CTTTGTATTC TCCGTCCACC ACCATCTCGC CGGCCAGGTA GCTGACTGAC 60 GTCATACTCC GACAAGGTGA CGTCTTTCTC TACGCCTCCA CTATGTCACA GTTATGACAA 121092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCATACTCC GACAAGGTGA CGTCTTTCTC TACGCCTCCA CTATGTCACA GTTATGACAA 120 GGTCACGGAA CCGTTCACCA ACCAGAACAA CAACCATTTC AACTGGCGGC GCCGGCGGCA 121152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCACGGAA CCGTTCACCA ACCAGAACAA CAACCATTTC AACTGGCGGC GCCGGCGGCA 180 GAGACGGAGG AGGAGCCACG ACGGCGATGA GGGTGATAGT ACCCTTACAA GGTGTAGTAC 121212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGACGGAGG AGGAGCCACG ACGGCGATGA GGGTGATAGT ACCCTTACAA GGTGTAGTAC 240 AAGGTCGGGG TGGTCTTTTC TTAGGTTCAG TAATACCCTG TGCTCTTTTT TATTTTTGGC 121272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTCGGGG TGGTCTTTTC TTAGGTTCAG TAATACCCTG TGCTCTTTTT TATTTTTGGC 300 AACTCTACCT AAAACGAAAT CGTTCCTCCG GTGGTGACAA TAACGGCGAA TCTACGGCAC 121332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTCTACCT AAAACGAAAT CGTTCCTCCG GTGGTGACAA TAACGGCGAA TCTACGGCAC 360 CGGCGAGGTC ACCGTCGTCG ACCCATTTGC CAGAAGTGTC TTCTGGGTCT GGGTTACAAA 121392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGCGAGGTC ACCGTCGTCG ACCCATTTGC CAGAAGTGTC TTCTGGGTCT GGGTTACAAA 420 GGGTTCATTC ACGTCTGTTA TTGTCACCGA 121422 |||||||||| |||||||||| |||||||||| GGGTTCATTC ACGTCTGTTA TTGTCACCGA 450 hqPGS_C08HBa0165B06.1+_SGN-E278998+ (120973 121422) ******************************************************************************** EST sequence 332 +strand 703 n (File: SGN-E345187+) 1 TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 61 TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 121 AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 181 ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 241 TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 301 GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 361 ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 421 CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 481 TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 541 CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 601 AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC GGGGTGATTC 661 TGCTGGAGTT GGTCACTGGG AGGAAACCAG TAGAGAGCCC AAT Predicted gene structure (within gDNA segment 126763 to 124851): Exon 1 126163 125461 ( 703 n); cDNA 1 703 ( 703 n); score: 1.000 MATCH C08HBa0165B06.1- SGN-E345187+ 1.000 703 1.000 C PGS_C08HBa0165B06.1-_SGN-E345187+ (126163 125461) Alignment (genomic DNA sequence = upper lines): TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 126104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 60 TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 126044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 120 AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 125984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 180 ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 125924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 240 TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 125864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 300 GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 125804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 360 ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 125744 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 420 CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 125684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 480 TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 125624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 540 CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 125564 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 600 AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC GGGGTGATTC 125504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC GGGGTGATTC 660 TGCTGGAGTT GGTCACTGGG AGGAAACCAG TAGAGAGCCC AAT 125461 |||||||||| |||||||||| |||||||||| |||||||||| ||| TGCTGGAGTT GGTCACTGGG AGGAAACCAG TAGAGAGCCC AAT 703 hqPGS_C08HBa0165B06.1-_SGN-E345187+ (126163 125461) ******************************************************************************** EST sequence 333 +strand 664 n (File: SGN-E345419+) 1 TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 61 TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 121 AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 181 ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 241 TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 301 GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 361 ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 421 CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 481 TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 541 CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 601 AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC NGGGTGATTC 661 TGCT Predicted gene structure (within gDNA segment 126763 to 124764): Exon 1 126163 125500 ( 664 n); cDNA 1 664 ( 664 n); score: 0.998 MATCH C08HBa0165B06.1- SGN-E345419+ 0.998 664 1.000 C PGS_C08HBa0165B06.1-_SGN-E345419+ (126163 125500) Alignment (genomic DNA sequence = upper lines): TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 126104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCAGCAA GACTTTGCCT TCAAAATATG AGGACTGGGA GGCTGGCACA AAAGCCTTGC 60 TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 126044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGACAAGGA GTCTTTGATT GGTGGGGGAA CAATTGGATC AGTTTACAGA ACTTCCTTTG 120 AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 125984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTGT ATCAATTGCA GTGAAAAAGC TCGAGACATT GGGGCAAATC AGAAATCAAG 180 ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 125924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAATTTGA GCATGAAGTT GGCCGGTTAG GGACCCTTCA GCACCCCAAT CTTGTTGCTT 240 TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 125864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAGGGTA CTACTGGTCC TCTAGCATGC AGTTAATATT GTCGGAGTTT GTTCCGAATG 300 GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 125804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACCTATA TGACAATTTG CATGGACTTA GTTATCCTGG AACCAGCACT GGTGCTGGTA 360 ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 125744 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCAGAATT GAATTGGCCA AGAAGGTTTC AGATAGCAGT TGGAACAGCT CGAGCGCTCA 420 CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 125684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATCTTCA CCATGATTGC AAACCTCCTG TCCTTCATCT TAATGTCAAG TCCACTAATA 480 TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 125624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTCCTGGA CACAAACTAT GAAGCCAAAT TGACTGATTA TGGCCTGAGT AGGTTCCTTC 540 CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 125564 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTGCTAGA CAATTATGGA CTAACCAAAT TTCACAATGC AGTTGGTTAC GTTGCACCAG 600 AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC GGGGTGATTC 125504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AGTTGGCGCA AAGTCTGAGA CTAAGTGATA AATGTGACGT TTACAGTTTC NGGGTGATTC 660 TGCT 125500 |||| TGCT 664 hqPGS_C08HBa0165B06.1-_SGN-E345419+ (126163 125500) ******************************************************************************** EST sequence 291 +strand 184 n (File: SGN-E392929+) 1 CTCCTTAGCA AGACTTTGCC TTCAAAATAT GAGGACTGGG AGGCTGGCAC AAAAGCCTTG 61 CTAGACAAGG AGTCTTTGAT TGGTGGGGGA ACAATTGGAT CAGTTTACAG AACTTCCTTT 121 GAAGGTGGTG TATCAATTGC ACTGAAAAAG CTCGAGACAT TGGGGCAAAT CAGAAATCAA 181 GATG Predicted gene structure (within gDNA segment 126818 to 125371): Exon 1 126164 125981 ( 184 n); cDNA 1 184 ( 184 n); score: 0.978 MATCH C08HBa0165B06.1- SGN-E392929+ 0.978 184 1.000 C PGS_C08HBa0165B06.1-_SGN-E392929+ (126164 125981) Alignment (genomic DNA sequence = upper lines): CTTTTCAGCA AGACTTTGCC TTCAAAATAT GAGGACTGGG AGGCTGGCAC AAAAGCCTTG 126105 || | |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTTAGCA AGACTTTGCC TTCAAAATAT GAGGACTGGG AGGCTGGCAC AAAAGCCTTG 60 CTAGACAAGG AGTCTTTGAT TGGTGGGGGA ACAATTGGAT CAGTTTACAG AACTTCCTTT 126045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGACAAGG AGTCTTTGAT TGGTGGGGGA ACAATTGGAT CAGTTTACAG AACTTCCTTT 120 GAAGGTGGTG TATCAATTGC AGTGAAAAAG CTCGAGACAT TGGGGCAAAT CAGAAATCAA 125985 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTG TATCAATTGC ACTGAAAAAG CTCGAGACAT TGGGGCAAAT CAGAAATCAA 180 GATG 125981 |||| GATG 184 hqPGS_C08HBa0165B06.1-_SGN-E392929+ (126164 125981) ******************************************************************************** EST sequence 250 +strand 795 n (File: SGN-E555521+) 1 ATTTTAAGCT ATACCCAATA AATGCACTTT AATTACTTTC TTGTTTTAAG AAGATACTGA 61 GTAAGTATTT AAAATGCTTT TGTTTAGTCA AGATCGAAAT CTTGTATTTT TGATAATTGA 121 ACCTCATTTG AGAAAAGGCA AAAGGGTGTC TGGAGAAGTA GAGATCAACA AGTTCCAAGA 181 TTGGATCCAG CTATGATAAT GTTTGAGTGT TTGTGCTGGG GAACATGAGA AAATTAGGTA 241 CATTTGTTCA TTGTGTTGTT TTAGTTTGGT GTTTTTGTTT GATTGAATTG GAATTGGTAT 301 CTCCCATCAC TGAAAAGGAG ATCCTTCTTC AGTTCAAGGG TAACATTTCT ACTGACCCTT 361 TTAATAGTTT AGCTTCTTGG GATCCTAATG GAACTCCTTG CCTAGACTTT AGTGGTGTTT 421 TCTGCAATTC TGTTGGAAAT GTGGTGAAGA TTGTGTTGTG GAACACTAGT CTTGGTGGGG 481 TTCTCTCCCC TGCCTTAGCA GAACTTAAGT CTTTGCGCAT CCTTACCTTG TTTGGGAACC 541 AATTTACTGG CAATATTCCT GCAGAGTATG GGGGGATTGA TTCATTGTGG AAGATTAACT 601 TCAGCTCTAA TGCCTTTTCT GGTTCAATTC CTGAATTTCT TGGGGATTTA CCTAATATAA 661 GGTTCCTTGA TTTGTCAAGA AATGTGTATA GTGGTGAAAT TCCTGTGTCT TTGTTTGTGA 721 AATGTAACAA AACAAGGTTC ATTTCCTTGT CCCATAACAA TCTTTCAGGT TCAATTCCAG 781 CATCCATTGG AAACT Predicted gene structure (within gDNA segment 128793 to 126690): Exon 1 128193 127399 ( 795 n); cDNA 1 795 ( 795 n); score: 0.997 MATCH C08HBa0165B06.1- SGN-E555521+ 0.997 795 1.000 C PGS_C08HBa0165B06.1-_SGN-E555521+ (128193 127399) Alignment (genomic DNA sequence = upper lines): ATTTTAAGCT ATACCCAATA AATGCACTTT AATTACTTTC TTGTTTTAAG AAGATACTGA 128134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTAAGCT ATACCCAATA AATGCACTTT AATTACTTTC TTGTTTTAAG AAGATACTGA 60 GTAAGTATTT AAAATGCTTT TGTTTAGTCA AGATCGAAAT CTTGTATTTT TGATAATTGA 128074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAGTATTT AAAATGCTTT TGTTTAGTCA AGATCGAAAT CTTGTATTTT TGATAATTGA 120 ACCTCATTTG AGAAAAGGCA AAAGGGTGTC TGGAGAAGTA GAGATCAACA AGTTCCAAGA 128014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCATTTG AGAAAAGGCA AAAGGGTGTC TGGAGAAGTA GAGATCAACA AGTTCCAAGA 180 TTGGATCCAG CTATGATAAT GTTTGAGTGT TTGTGCTGGG GAACATGAGA AAATTAGGTA 127954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATCCAG CTATGATAAT GTTTGAGTGT TTGTGCTGGG GAACATGAGA AAATTAGGTA 240 CATTTGTTCA TTGTGTTGTT TTAGTTTGGT GTTTTTGTTT GATTGAATTG GAATTGGTAT 127894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTGTTCA TTGTGTTGTT TTAGTTTGGT GTTTTTGTTT GATTGAATTG GAATTGGTAT 300 CTCCCATCAC TGAAAAGGAG ATCCTTCTTC AGTTCAAGGG TAACATTTCT ACTGACCCTT 127834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCCATCAC TGAAAAGGAG ATCCTTCTTC AGTTCAAGGG TAACATTTCT ACTGACCCTT 360 TTAATAGTTT AGCTTCTTGG GATCCTAATG GAACTCCTTG CCTAGACTTT AGTGGTGTTT 127774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAATAGTTT AGCTTCTTGG GATCCTAATG GAACTCCTTG CCTAGACTTT AGTGGTGTTT 420 TCTGCAATTC TGTTGGAAAT GTGGTGAAGA TTGTGTTGTG GAACACTAGT CTTGGTGGGG 127714 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCAATTC TGTTGGAAAT GTGGTGAAGA TTGTGTTGTG GAACACTAGT CTTGGTGGGG 480 TTCTCTCCCC TGCCTTAGCA GAACTTAAGT CTTTGCGCAT CCTTACCTTG TTTGGGAACC 127654 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCTCCCC TGCCTTAGCA GAACTTAAGT CTTTGCGCAT CCTTACCTTG TTTGGGAACC 540 AATTTACTGG CAATATTCCT GCAGAGTATG GGGGGATTGA TTCATTGTGG AAGATTAACT 127594 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTACTGG CAATATTCCT GCAGAGTATG GGGGGATTGA TTCATTGTGG AAGATTAACT 600 TCAGCTCTAA TGCCTTTTCT GGTTCAATTC CTGAATTTCT TGGGGATTTA CCTAATATAA 127534 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGCTCTAA TGCCTTTTCT GGTTCAATTC CTGAATTTCT TGGGGATTTA CCTAATATAA 660 GGTTCCTTGA TTTGTCAAGA AATGTGTATA GTGGTGAAAT TCCTGTGTCT TTGTTTGTGA 127474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTCCTTGA TTTGTCAAGA AATGTGTATA GTGGTGAAAT TCCTGTGTCT TTGTTTGTGA 720 ATTGTAACAA AACAAGGTTC ATTTCCTTGT CCCATAACAA TCTTTCAGGT TCAATTCCAG 127414 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTAACAA AACAAGGTTC ATTTCCTTGT CCCATAACAA TCTTTCAGGT TCAATTCCAG 780 CATCAATTGG AAACT 127399 |||| ||||| ||||| CATCCATTGG AAACT 795 hqPGS_C08HBa0165B06.1-_SGN-E555521+ (128193 127399) ******************************************************************************** EST sequence 157 +strand 295 n (File: SGN-E282413+) 1 AAAGTTCCAA ACTTTATTGT TTCATTCAAG AAAAGAGTAC CAAATTATAG AATTTTAAGC 61 TATACCCAAT AAATGCACTT TAATTACTTT CTTGTTTTAA GAAGATACTG AGTAAGTATT 121 TAAAATGCTT TTGTTTAGTC AAGATCGAAA TCTTGTATTT TTGATAATTG AACCTCATTT 181 GAGAAAAGGC AAAAGGGTGT CTGGAGAAGT AGAGATCAAC AAGTTCCAAG ATTGGATCCA 241 GCTATGATAA TGTTTGAGTG TTTGTGCTGG GGAACATGAG AAAATTAAGT ACATT Predicted gene structure (within gDNA segment 128844 to 127268): Exon 1 128244 127950 ( 295 n); cDNA 1 295 ( 295 n); score: 0.993 MATCH C08HBa0165B06.1- SGN-E282413+ 0.993 295 1.000 C PGS_C08HBa0165B06.1-_SGN-E282413+ (128244 127950) Alignment (genomic DNA sequence = upper lines): AAAGTTCCAA ACTTTATTGT TTCATTCAAG AAAAGAGTAC CAAATCATAG AATTTTAAGC 128185 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AAAGTTCCAA ACTTTATTGT TTCATTCAAG AAAAGAGTAC CAAATTATAG AATTTTAAGC 60 TATACCCAAT AAATGCACTT TAATTACTTT CTTGTTTTAA GAAGATACTG AGTAAGTATT 128125 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACCCAAT AAATGCACTT TAATTACTTT CTTGTTTTAA GAAGATACTG AGTAAGTATT 120 TAAAATGCTT TTGTTTAGTC AAGATCGAAA TCTTGTATTT TTGATAATTG AACCTCATTT 128065 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGCTT TTGTTTAGTC AAGATCGAAA TCTTGTATTT TTGATAATTG AACCTCATTT 180 GAGAAAAGGC AAAAGGGTGT CTGGAGAAGT AGAGATCAAC AAGTTCCAAG ATTGGATCCA 128005 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAAAAGGC AAAAGGGTGT CTGGAGAAGT AGAGATCAAC AAGTTCCAAG ATTGGATCCA 240 GCTATGATAA TGTTTGAGTG TTTGTGCTGG GGAACATGAG AAAATTAGGT ACATT 127950 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||| GCTATGATAA TGTTTGAGTG TTTGTGCTGG GGAACATGAG AAAATTAAGT ACATT 295 hqPGS_C08HBa0165B06.1-_SGN-E282413+ (128244 127950) ******************************************************************************** EST sequence 13 -strand 506 n (File: SGN-E578392-) 1 TTTTTTTTTT AGCTTATAAG CTGTTTTAAG TTGATCACAT CTTTATCTTT TTGCCCTTAA 61 TATTTTTATA CAATTTCCAA GTTACACATA TAACCCTAAC ATCTCTTTCT TCCATTTTTC 121 GCTTTTCACG TTTGGCATAA CAACTTCAGC ACTTTTATCC AAATGCATAA CTGTTTATTT 181 TAGAAATAAG TTTCAGCACT TTCAAAAGTA CTTTTTTAAA GCTGTTTTTA TTAAGCCCAT 241 CCAAACGGGC CCTAAATAAG AAAATATTCT GACAAAAATT CTCATAAATT AATTTAGACT 301 ATATATTATT TTTAATTTCT TACCCAGTAA ACTAATAAAT GAGTAGGTCA ATAACTTTAA 361 TTTCCCAAAC TTAGGTGGAT TAGACATGTT AGGTTGATAA ACTAACTCTG TCACCTTTAT 421 CTATATTTAT GTCTTTAATA ATATATGAGA TTTGACTTCG TTATATATAT CGAACATCGA 481 ATCGAAAAAA ACTGGTTTAA GCTGAG Predicted gene structure (within gDNA segment 130010 to 125972): Exon 1 129400 129153 ( 248 n); cDNA 1 247 ( 247 n); score: 0.931 Intron 1 129152 126721 (2432 n); Pd: 0.000 (s: 0.96), Pa: 0.999 (s: 0.55) Exon 2 126720 126679 ( 42 n); cDNA 248 287 ( 40 n); score: 0.548 MATCH C08HBa0165B06.1- SGN-E578392- 0.931 290 0.573 C PGS_C08HBa0165B06.1-_SGN-E578392- (129400 129153,126720 126679) Alignment (genomic DNA sequence = upper lines): TTTTTTTTTT AGCTTATAAG CTGTTTTAAG TTGACCACAT TTTTATGTTT TTTCCCTTAA 129341 |||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||| || ||||||| TTTTTTTTTT AGCTTATAAG CTGTTTTAAG TTGATCACAT CTTTATCTTT TTGCCCTTAA 60 TATTTTTATA CAATCTCCAA ATTACCCATA TAACCCTAAC ATCTCTTTCT TCTATTTTTC 129281 |||||||||| |||| ||||| |||| |||| |||||||||| |||||||||| || ||||||| TATTTTTATA CAATTTCCAA GTTACACATA TAACCCTAAC ATCTCTTTCT TCCATTTTTC 120 CCTCTTCACG TTTGACATAA CAACTTCAGC ACTTTTATCT AAACGCATAA CTGCTTATTT 129221 || |||||| |||| ||||| |||||||||| ||||||||| ||| |||||| ||| |||||| GCTTTTCACG TTTGGCATAA CAACTTCAGC ACTTTTATCC AAATGCATAA CTGTTTATTT 180 TAAAAATAAG TTTCAGCACT TTCAAAAGTA CTTTTTTTAA AGCTGCTTTT ATTAAGCCCA 129161 || ||||||| |||||||||| |||||||||| | |||||||| ||||| |||| |||||||||| TAGAAATAAG TTTCAGCACT TTCAAAAGTA C-TTTTTTAA AGCTGTTTTT ATTAAGCCCA 239 TCCAAACGGT AGAGTCCGTT AGTTCGAGCG ATCTTGTATA TATACATCAG AAGACATGGT 129101 |||||||| TCCAAACG.. .......... .......... .......... .......... .......... 247 TAATGCAACC TTGTTACATG TATATATATA ATTTACTTTT GAAGAATCTC ACACAAAGTT 129041 .......... .......... .......... .......... .......... .......... 247 ACCGACATTT ATAGAGTTAT TCCATCAATC GGAGTGACAT TTTTAGAGTT GTTACATGTA 128981 .......... .......... .......... .......... .......... .......... 247 TATATATCTT GCTTTTTTAT ACATATATTT TTAATTAAAA ATAGGAAAAA TGTAGAATTA 128921 .......... .......... .......... .......... .......... .......... 247 TCCCTGATCT TTACTCGAAA TCTCAGAGAT ACACTTATAC TACACTACCT ATTATTTCCT 128861 .......... .......... .......... .......... .......... .......... 247 CAAATTATTG TATAACTAAT TTTCTACCTC TTTTTGATAT ACGTGGCACT ATCTTGTGGG 128801 .......... .......... .......... .......... .......... .......... 247 TTCAGTGCGT GTTGACATTT TTTTTTCAAA CTAGTGTCAC GTAGGCCGAA AAAAGTAAAA 128741 .......... .......... .......... .......... .......... .......... 247 AATTATGTAT TAAATAAGTT CAAAAATAAT AAAATTTTAA TATATTACAA GTATATCTCT 128681 .......... .......... .......... .......... .......... .......... 247 AAAAATTCAA ACGTAAATTC AAAAATACTT ATATATTTTT TCTTAAAAAA TAATAAATTC 128621 .......... .......... .......... .......... .......... .......... 247 AGTTTGAACC AGTAAAACTC GCCCTAAATC TTTCATTCTT GAGTGTGGTT AAAAGGAGAA 128561 .......... .......... .......... .......... .......... .......... 247 GATGACCATG TGGAGACAAC CGTCAAAAAT ATTTCAGCAG TTTCTCTATT AAATCAAAAC 128501 .......... .......... .......... .......... .......... .......... 247 AAAAAAAAAA CTGGCAGATC AACAACCTTT TTCAGCAAAG CCAGGCATTT TCACCTTGCA 128441 .......... .......... .......... .......... .......... .......... 247 TCCCACTAGT TTTGTACTCT GTTTTGCATG TCATTGCCAG CCAGACTAGT AATAGCAGTT 128381 .......... .......... .......... .......... .......... .......... 247 CTAAAAATTT CATTTTTTTT GTTTTGGGGT TCTCTCTTCT TAAGCCCACT TTCTTGAAAT 128321 .......... .......... .......... .......... .......... .......... 247 CTTCATTTTT CTTGAAATTC TGCAAAATTA TAGAATTTAG GGTTAGTAAC TCAAACACCA 128261 .......... .......... .......... .......... .......... .......... 247 GATGTACAAA ATACCCAAAG TTCCAAACTT TATTGTTTCA TTCAAGAAAA GAGTACCAAA 128201 .......... .......... .......... .......... .......... .......... 247 TCATAGAATT TTAAGCTATA CCCAATAAAT GCACTTTAAT TACTTTCTTG TTTTAAGAAG 128141 .......... .......... .......... .......... .......... .......... 247 ATACTGAGTA AGTATTTAAA ATGCTTTTGT TTAGTCAAGA TCGAAATCTT GTATTTTTGA 128081 .......... .......... .......... .......... .......... .......... 247 TAATTGAACC TCATTTGAGA AAAGGCAAAA GGGTGTCTGG AGAAGTAGAG ATCAACAAGT 128021 .......... .......... .......... .......... .......... .......... 247 TCCAAGATTG GATCCAGCTA TGATAATGTT TGAGTGTTTG TGCTGGGGAA CATGAGAAAA 127961 .......... .......... .......... .......... .......... .......... 247 TTAGGTACAT TTGTTCATTG TGTTGTTTTA GTTTGGTGTT TTTGTTTGAT TGAATTGGAA 127901 .......... .......... .......... .......... .......... .......... 247 TTGGTATCTC CCATCACTGA AAAGGAGATC CTTCTTCAGT TCAAGGGTAA CATTTCTACT 127841 .......... .......... .......... .......... .......... .......... 247 GACCCTTTTA ATAGTTTAGC TTCTTGGGAT CCTAATGGAA CTCCTTGCCT AGACTTTAGT 127781 .......... .......... .......... .......... .......... .......... 247 GGTGTTTTCT GCAATTCTGT TGGAAATGTG GTGAAGATTG TGTTGTGGAA CACTAGTCTT 127721 .......... .......... .......... .......... .......... .......... 247 GGTGGGGTTC TCTCCCCTGC CTTAGCAGAA CTTAAGTCTT TGCGCATCCT TACCTTGTTT 127661 .......... .......... .......... .......... .......... .......... 247 GGGAACCAAT TTACTGGCAA TATTCCTGCA GAGTATGGGG GGATTGATTC ATTGTGGAAG 127601 .......... .......... .......... .......... .......... .......... 247 ATTAACTTCA GCTCTAATGC CTTTTCTGGT TCAATTCCTG AATTTCTTGG GGATTTACCT 127541 .......... .......... .......... .......... .......... .......... 247 AATATAAGGT TCCTTGATTT GTCAAGAAAT GTGTATAGTG GTGAAATTCC TGTGTCTTTG 127481 .......... .......... .......... .......... .......... .......... 247 TTTGTGAATT GTAACAAAAC AAGGTTCATT TCCTTGTCCC ATAACAATCT TTCAGGTTCA 127421 .......... .......... .......... .......... .......... .......... 247 ATTCCAGCAT CAATTGGAAA CTGTCAGAGT CTTGAAGGAA TAGACTTGTC TTTTAATGGT 127361 .......... .......... .......... .......... .......... .......... 247 CTAAGTGGAA GTTTACCTTC ACAAATTTGT GACATTCCAG GATTAGTGTA CTTGTCTGTG 127301 .......... .......... .......... .......... .......... .......... 247 AGGAGCAATG CACTATCAGG ACTTGTTCAA GAACAGGTTT CTCCATGTCA AAGGTTGGAG 127241 .......... .......... .......... .......... .......... .......... 247 CTTTTGGATC TTGGTAGCAA TGAGTTCTCT GGTTTGGCTC CTTTCGGAGT TCTTGAGCTG 127181 .......... .......... .......... .......... .......... .......... 247 GTGAATCTTA CATATTTCAA TGTTTCAAAT AATGATTTTG AAGGGGAGAT TGTTAACTCT 127121 .......... .......... .......... .......... .......... .......... 247 GGAACTTGTA GCCAGAGACT GGAAGTGTTG GATGTTTCAA GGAATAATTT TTTTGGCGAA 127061 .......... .......... .......... .......... .......... .......... 247 ATTCCCTTGA GCATCTCGAA ATGCAACACG TTGAAATACT TGGACATGGC ATATAACAGA 127001 .......... .......... .......... .......... .......... .......... 247 ATTAATGGAA GTATCCCTAT TGAGCTTGCA GATTTGAAAA GCCTTTCCGT TATTCGATTG 126941 .......... .......... .......... .......... .......... .......... 247 GGTGATAATT TGTTAGGCGG GACAATTCCA GCCGAACTTG GTGGTATCGA ATGGCTTGCA 126881 .......... .......... .......... .......... .......... .......... 247 GTTTTGGACC TCCATAATCT CACCCTATTT GGTGAAATCC CATATGAGAT AAGCAACTGC 126821 .......... .......... .......... .......... .......... .......... 247 AAGCTTCTTC TTCAACTGTG AGTATATTAC CATCTTAGTT TAATTTGTTC ATTTCGTCAT 126761 .......... .......... .......... .......... .......... .......... 247 TGCTTTGAAC TGGAATTGAA ACGTCTAATA TTTGCTGCAG GGATCTATCT GGGAATCTTT 126701 || ||| | ||| | | .......... .......... .......... .......... GGCCCTAAAT AAGAAAATAT 267 TAGTAGGAGA AATACCACAA AA 126679 | | | | ||| | || || T-CTGACAAA AAT-TCTCAT AA 287 hqPGS_C08HBa0165B06.1-_SGN-E578392- (129400 129153) ******************************************************************************** EST sequence 380 +strand 346 n (File: SGN-E391901+) 1 TTTTTTTTTT TTAAAAATAA GTTTCAGTCC TTTCAAAAGT ACTTTTTTAA AGCTGCTTTT 61 ACTAAGCCCA TCCAAACGGG TCACAAAAGC ACTTTACTTA AAAGCAATAT AGAAAAAGCT 121 ACAACCATTA TACATTCATA GACACTTCAA ATTGTCAGCT GAGGCTATAC ACTTTGGATG 181 ACCACGAGAA ACTTTATTGC ATTACATTAC ACTATTTAGT TCCAGCTTTA GCAGCACAGT 241 GAAATATCAC GATTGTTCAG TATGGGACGA TGATGGATTC TATAATCTCT TGAAGTGGAG 301 CCAGTTCCTT CTTGTCAATC AGTCCAAACT CATGGGTGAA GAGTAT Predicted gene structure (within gDNA segment 129903 to 125872): Exon 1 129226 129153 ( 74 n); cDNA 6 78 ( 73 n); score: 0.932 Intron 1 129152 126721 (2432 n); Pd: 0.000 (s: 0.96), Pa: 0.999 (s: 0.56) Exon 2 126720 126676 ( 45 n); cDNA 79 120 ( 42 n); score: 0.556 MATCH C08HBa0165B06.1- SGN-E391901+ 0.932 119 0.344 C PGS_C08HBa0165B06.1-_SGN-E391901+ (129226 129153,126720 126676) Alignment (genomic DNA sequence = upper lines): TTATTTTAAA AATAAGTTTC AGCACTTTCA AAAGTACTTT TTTTAAAGCT GCTTTTATTA 129167 || ||||||| |||||||||| || |||||| ||||||| || |||||||||| ||||||| || TTTTTTTAAA AATAAGTTTC AGTCCTTTCA AAAGTAC-TT TTTTAAAGCT GCTTTTACTA 64 AGCCCATCCA AACGGTAGAG TCCGTTAGTT CGAGCGATCT TGTATATATA CATCAGAAGA 129107 |||||||||| |||| AGCCCATCCA AACG...... .......... .......... .......... .......... 78 CATGGTTAAT GCAACCTTGT TACATGTATA TATATAATTT ACTTTTGAAG AATCTCACAC 129047 .......... .......... .......... .......... .......... .......... 78 AAAGTTACCG ACATTTATAG AGTTATTCCA TCAATCGGAG TGACATTTTT AGAGTTGTTA 128987 .......... .......... .......... .......... .......... .......... 78 CATGTATATA TATCTTGCTT TTTTATACAT ATATTTTTAA TTAAAAATAG GAAAAATGTA 128927 .......... .......... .......... .......... .......... .......... 78 GAATTATCCC TGATCTTTAC TCGAAATCTC AGAGATACAC TTATACTACA CTACCTATTA 128867 .......... .......... .......... .......... .......... .......... 78 TTTCCTCAAA TTATTGTATA ACTAATTTTC TACCTCTTTT TGATATACGT GGCACTATCT 128807 .......... .......... .......... .......... .......... .......... 78 TGTGGGTTCA GTGCGTGTTG ACATTTTTTT TTCAAACTAG TGTCACGTAG GCCGAAAAAA 128747 .......... .......... .......... .......... .......... .......... 78 GTAAAAAATT ATGTATTAAA TAAGTTCAAA AATAATAAAA TTTTAATATA TTACAAGTAT 128687 .......... .......... .......... .......... .......... .......... 78 ATCTCTAAAA ATTCAAACGT AAATTCAAAA ATACTTATAT ATTTTTTCTT AAAAAATAAT 128627 .......... .......... .......... .......... .......... .......... 78 AAATTCAGTT TGAACCAGTA AAACTCGCCC TAAATCTTTC ATTCTTGAGT GTGGTTAAAA 128567 .......... .......... .......... .......... .......... .......... 78 GGAGAAGATG ACCATGTGGA GACAACCGTC AAAAATATTT CAGCAGTTTC TCTATTAAAT 128507 .......... .......... .......... .......... .......... .......... 78 CAAAACAAAA AAAAAACTGG CAGATCAACA ACCTTTTTCA GCAAAGCCAG GCATTTTCAC 128447 .......... .......... .......... .......... .......... .......... 78 CTTGCATCCC ACTAGTTTTG TACTCTGTTT TGCATGTCAT TGCCAGCCAG ACTAGTAATA 128387 .......... .......... .......... .......... .......... .......... 78 GCAGTTCTAA AAATTTCATT TTTTTTGTTT TGGGGTTCTC TCTTCTTAAG CCCACTTTCT 128327 .......... .......... .......... .......... .......... .......... 78 TGAAATCTTC ATTTTTCTTG AAATTCTGCA AAATTATAGA ATTTAGGGTT AGTAACTCAA 128267 .......... .......... .......... .......... .......... .......... 78 ACACCAGATG TACAAAATAC CCAAAGTTCC AAACTTTATT GTTTCATTCA AGAAAAGAGT 128207 .......... .......... .......... .......... .......... .......... 78 ACCAAATCAT AGAATTTTAA GCTATACCCA ATAAATGCAC TTTAATTACT TTCTTGTTTT 128147 .......... .......... .......... .......... .......... .......... 78 AAGAAGATAC TGAGTAAGTA TTTAAAATGC TTTTGTTTAG TCAAGATCGA AATCTTGTAT 128087 .......... .......... .......... .......... .......... .......... 78 TTTTGATAAT TGAACCTCAT TTGAGAAAAG GCAAAAGGGT GTCTGGAGAA GTAGAGATCA 128027 .......... .......... .......... .......... .......... .......... 78 ACAAGTTCCA AGATTGGATC CAGCTATGAT AATGTTTGAG TGTTTGTGCT GGGGAACATG 127967 .......... .......... .......... .......... .......... .......... 78 AGAAAATTAG GTACATTTGT TCATTGTGTT GTTTTAGTTT GGTGTTTTTG TTTGATTGAA 127907 .......... .......... .......... .......... .......... .......... 78 TTGGAATTGG TATCTCCCAT CACTGAAAAG GAGATCCTTC TTCAGTTCAA GGGTAACATT 127847 .......... .......... .......... .......... .......... .......... 78 TCTACTGACC CTTTTAATAG TTTAGCTTCT TGGGATCCTA ATGGAACTCC TTGCCTAGAC 127787 .......... .......... .......... .......... .......... .......... 78 TTTAGTGGTG TTTTCTGCAA TTCTGTTGGA AATGTGGTGA AGATTGTGTT GTGGAACACT 127727 .......... .......... .......... .......... .......... .......... 78 AGTCTTGGTG GGGTTCTCTC CCCTGCCTTA GCAGAACTTA AGTCTTTGCG CATCCTTACC 127667 .......... .......... .......... .......... .......... .......... 78 TTGTTTGGGA ACCAATTTAC TGGCAATATT CCTGCAGAGT ATGGGGGGAT TGATTCATTG 127607 .......... .......... .......... .......... .......... .......... 78 TGGAAGATTA ACTTCAGCTC TAATGCCTTT TCTGGTTCAA TTCCTGAATT TCTTGGGGAT 127547 .......... .......... .......... .......... .......... .......... 78 TTACCTAATA TAAGGTTCCT TGATTTGTCA AGAAATGTGT ATAGTGGTGA AATTCCTGTG 127487 .......... .......... .......... .......... .......... .......... 78 TCTTTGTTTG TGAATTGTAA CAAAACAAGG TTCATTTCCT TGTCCCATAA CAATCTTTCA 127427 .......... .......... .......... .......... .......... .......... 78 GGTTCAATTC CAGCATCAAT TGGAAACTGT CAGAGTCTTG AAGGAATAGA CTTGTCTTTT 127367 .......... .......... .......... .......... .......... .......... 78 AATGGTCTAA GTGGAAGTTT ACCTTCACAA ATTTGTGACA TTCCAGGATT AGTGTACTTG 127307 .......... .......... .......... .......... .......... .......... 78 TCTGTGAGGA GCAATGCACT ATCAGGACTT GTTCAAGAAC AGGTTTCTCC ATGTCAAAGG 127247 .......... .......... .......... .......... .......... .......... 78 TTGGAGCTTT TGGATCTTGG TAGCAATGAG TTCTCTGGTT TGGCTCCTTT CGGAGTTCTT 127187 .......... .......... .......... .......... .......... .......... 78 GAGCTGGTGA ATCTTACATA TTTCAATGTT TCAAATAATG ATTTTGAAGG GGAGATTGTT 127127 .......... .......... .......... .......... .......... .......... 78 AACTCTGGAA CTTGTAGCCA GAGACTGGAA GTGTTGGATG TTTCAAGGAA TAATTTTTTT 127067 .......... .......... .......... .......... .......... .......... 78 GGCGAAATTC CCTTGAGCAT CTCGAAATGC AACACGTTGA AATACTTGGA CATGGCATAT 127007 .......... .......... .......... .......... .......... .......... 78 AACAGAATTA ATGGAAGTAT CCCTATTGAG CTTGCAGATT TGAAAAGCCT TTCCGTTATT 126947 .......... .......... .......... .......... .......... .......... 78 CGATTGGGTG ATAATTTGTT AGGCGGGACA ATTCCAGCCG AACTTGGTGG TATCGAATGG 126887 .......... .......... .......... .......... .......... .......... 78 CTTGCAGTTT TGGACCTCCA TAATCTCACC CTATTTGGTG AAATCCCATA TGAGATAAGC 126827 .......... .......... .......... .......... .......... .......... 78 AACTGCAAGC TTCTTCTTCA ACTGTGAGTA TATTACCATC TTAGTTTAAT TTGTTCATTT 126767 .......... .......... .......... .......... .......... .......... 78 CGTCATTGCT TTGAACTGGA ATTGAAACGT CTAATATTTG CTGCAGGGAT CTATCTGGGA 126707 || | | | | .......... .......... .......... .......... ......GG-T C-ACAAAAGC 90 ATCTTTTAGT AGGAGAAATA CCACAAAACC T 126676 | |||| | | || |||| |||| | | A-CTTTACTT AAAAGCAATA TAGAAAAAGC T 120 hqPGS_C08HBa0165B06.1-_SGN-E391901+ (129226 129153) ******************************************************************************** EST sequence 249 +strand 540 n (File: SGN-E253695+) 1 TCAAAATGGA CGGTTAAAGC TGAGGGAAAA AGTCAGCACC ATACAGATAA TTGTAAGATT 61 ATTGAGTTGA CACCATGGGA CATTCTTGAG CTTCAAATTG ACTACTTTCA AACTGGACTC 121 CTCTTCCTCA TGCCTGCATT TGAACAAGTA AGAGATCTAC TAAAAACAAC CAACACCAGT 181 TCCTTAATTG ATCATCTTAG AGTTTCACTA TCTCGAGCTT TAGAGCCTGT TTGGCTCAGC 241 TTAAAAGCTG GTCAAACTGA CTTAAAAGCT GGTTTTTGAC TTATTTAAAT GTTTGGCAAT 301 ACTCAAAATA GCTTATTTTA AGTTAAAAAA ACTTATTTTA AGCCAAAAGT GTGCTTTTTT 361 TTTTTAGCTT ATAAGCTGTT TTAAGTTGAC CATATTTTTA TGTTTTTTCC CTTAATATTT 421 TTATACAATC TCCAAATTAC CCATATAACA CTAACTTCTC TTTCTTCTAT TTTTCCCTTT 481 TCACGTTTGG CATAACAACT TCAACACTTT TATCCAAACG CATAATTGCT TATTTTAAAA Predicted gene structure (within gDNA segment 130549 to 128048): Exon 1 129556 129216 ( 341 n); cDNA 219 540 ( 322 n); score: 0.915 MATCH C08HBa0165B06.1- SGN-E253695+ 0.915 341 0.631 C PGS_C08HBa0165B06.1-_SGN-E253695+ (129556 129216) Alignment (genomic DNA sequence = upper lines): TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT GACTTAAAAG CTGGTTTTTG 129497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT GACTTAAAAG CTGGTTTTTG 278 ACTTATTTAA CTGTTTGACA ATACTCAAAA TAGCTTATTT TAAGTTAAAA AAAACTTATT 129437 |||||||||| |||||| || |||||||||| |||||||||| |||||| ||| |||||||||| ACTTATTTAA ATGTTTGGCA ATACTCAAAA TAGCTTATTT TAAGTT-AAA AAAACTTATT 337 TTAAGCCAAA AGTTAAAAGC TGGGGTAGGG GTGCTTTTTT TTTTTTAGCT TATAAGCTGT 129377 ||||||| |||| || |||| ||||| |||||||||| |||||||||| TTAAGCC--- ----AAAA-- ----GT---- GTGC-TTTTT TTTTTTAGCT TATAAGCTGT 379 TTTAAGTTGA CCACATTTTT ATGTTTTTTC CCTTAATATT TTTATACAAT CTCCAAATTA 129317 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAGTTGA CCATATTTTT ATGTTTTTTC CCTTAATATT TTTATACAAT CTCCAAATTA 439 CCCATATAAC CCTAACATCT CTTTCTTCTA TTTTTCCCTC TTCACGTTTG ACATAACAAC 129257 |||||||||| ||||| ||| |||||||||| ||||||||| |||||||||| ||||||||| CCCATATAAC ACTAACTTCT CTTTCTTCTA TTTTTCCCTT TTCACGTTTG GCATAACAAC 499 TTCAGCACTT TTATCTAAAC GCATAACTGC TTATTTTAAA A 129216 |||| ||||| ||||| |||| |||||| ||| |||||||||| | TTCAACACTT TTATCCAAAC GCATAATTGC TTATTTTAAA A 540 hqPGS_C08HBa0165B06.1-_SGN-E253695+ (129556 129216) ******************************************************************************** EST sequence 27 -strand 580 n (File: SGN-E204223-) 1 TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA TTTTAAGCCA AAAGTTAAAA 61 GCTGGGGTAG GGGTGCTTTT TTTTTAGCTT ATAAGCTGTT TTAAGTTGAC CACATTTTTA 121 TCTTTTTGCC CTTAATATTT TTATACAATC TCCAAATTAT CCACATAACT CTAACATCTC 181 TTTCTTCCAT TTTTCCATTT TCACGTTTGG CATAGCAACT TCAACACTTT TATCCAAATG 241 CATAACTTTT AAAAGTACTT TTTTAAAGCT AAGTCCATCC AAACGGGCCC TAAGAATGAA 301 CTCTACATGA ATTTTTCGAT CAAAATAAAC ATAATTTTGT ATAATTAATT ATTTTTAAAA 361 AATTTATGAT TAAACGAGAG TTTAGAGAGT TGATTACCAA GTAGAGCAAC AGTTCCTTCA 421 GTATCAACAC CAATTGATTG AAATCTTGAA AGCACAGATG AGATTGAATC GTTGTGATTA 481 GGGAGGTACT TCTCAACTTC TGAAAAGTAA GTTTCCTTGC TATCTTTCCT TCCTGTTTTC 541 ATTTCAATTT TTATTGGCCC TCCTAACCAA AGAAGACCAT Predicted gene structure (within gDNA segment 130193 to 124759): Exon 1 129475 129229 ( 247 n); cDNA 1 247 ( 247 n); score: 0.901 Intron 1 129228 128796 ( 433 n); Pd: 0.000 (s: 0.88), Pa: 0.786 (s: 0.45) Exon 2 128795 128747 ( 49 n); cDNA 248 296 ( 49 n); score: 0.449 Intron 2 128746 126721 (2026 n); Pd: 0.828 (s: 0.45), Pa: 0.999 (s: 0.62) Exon 3 126720 126679 ( 42 n); cDNA 297 334 ( 38 n); score: 0.619 MATCH C08HBa0165B06.1- SGN-E204223- 0.901 338 0.583 C PGS_C08HBa0165B06.1-_SGN-E204223- (129475 129229,128795 128747,126720 126679) Alignment (genomic DNA sequence = upper lines): TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA TTTTAAGCCA AAAGTTAAAA 129419 |||||||||| | |||||||| ||||| || |||||||||| |||||||||| |||||||||| TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA TTTTAAGCCA AAAGTTAAAA 60 GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT GTTTTAAGTT GACCACATTT 129359 |||||||||| |||||| | |||||||||| |||||||||| |||||||||| |||||||||| GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT GTTTTAAGTT GACCACATTT 117 TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT TACCCATATA ACCCTAACAT 129299 |||| ||||| ||||||||| |||||||||| |||||||||| || ||| ||| || ||||||| TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT TATCCACATA ACTCTAACAT 177 CTCTTTCTTC TATTTTTCCC TCTTCACGTT TGACATAACA ACTTCAGCAC TTTTATCTAA 129239 |||||||||| |||||||| | |||||||| || |||| || |||||| ||| ||||||| || CTCTTTCTTC CATTTTTCCA TTTTCACGTT TGGCATAGCA ACTTCAACAC TTTTATCCAA 237 ACGCATAACT GCTTATTTTA AAAATAAGTT TCAGCACTTT CAAAAGTACT TTTTTTAAAG 129179 | |||||||| ATGCATAACT .......... .......... .......... .......... .......... 247 CTGCTTTTAT TAAGCCCATC CAAACGGTAG AGTCCGTTAG TTCGAGCGAT CTTGTATATA 129119 .......... .......... .......... .......... .......... .......... 247 TACATCAGAA GACATGGTTA ATGCAACCTT GTTACATGTA TATATATAAT TTACTTTTGA 129059 .......... .......... .......... .......... .......... .......... 247 AGAATCTCAC ACAAAGTTAC CGACATTTAT AGAGTTATTC CATCAATCGG AGTGACATTT 128999 .......... .......... .......... .......... .......... .......... 247 TTAGAGTTGT TACATGTATA TATATCTTGC TTTTTTATAC ATATATTTTT AATTAAAAAT 128939 .......... .......... .......... .......... .......... .......... 247 AGGAAAAATG TAGAATTATC CCTGATCTTT ACTCGAAATC TCAGAGATAC ACTTATACTA 128879 .......... .......... .......... .......... .......... .......... 247 CACTACCTAT TATTTCCTCA AATTATTGTA TAACTAATTT TCTACCTCTT TTTGATATAC 128819 .......... .......... .......... .......... .......... .......... 247 GTGGCACTAT CTTGTGGGTT CAGTGCGTGT TGACATTTTT TTTTCAAACT AGTGTCACGT 128759 | || ||||| | || | || .......... .......... ...TTTAAAA GTACTTTTTT AAAGCTAAGT CCATCCAAAC 284 AGGCCGAAAA AAGTAAAAAA TTATGTATTA AATAAGTTCA AAAATAATAA AATTTTAATA 128699 |||| || || GGGCCCTAAG AA........ .......... .......... .......... .......... 296 TATTACAAGT ATATCTCTAA AAATTCAAAC GTAAATTCAA AAATACTTAT ATATTTTTTC 128639 .......... .......... .......... .......... .......... .......... 296 TTAAAAAATA ATAAATTCAG TTTGAACCAG TAAAACTCGC CCTAAATCTT TCATTCTTGA 128579 .......... .......... .......... .......... .......... .......... 296 GTGTGGTTAA AAGGAGAAGA TGACCATGTG GAGACAACCG TCAAAAATAT TTCAGCAGTT 128519 .......... .......... .......... .......... .......... .......... 296 TCTCTATTAA ATCAAAACAA AAAAAAAACT GGCAGATCAA CAACCTTTTT CAGCAAAGCC 128459 .......... .......... .......... .......... .......... .......... 296 AGGCATTTTC ACCTTGCATC CCACTAGTTT TGTACTCTGT TTTGCATGTC ATTGCCAGCC 128399 .......... .......... .......... .......... .......... .......... 296 AGACTAGTAA TAGCAGTTCT AAAAATTTCA TTTTTTTTGT TTTGGGGTTC TCTCTTCTTA 128339 .......... .......... .......... .......... .......... .......... 296 AGCCCACTTT CTTGAAATCT TCATTTTTCT TGAAATTCTG CAAAATTATA GAATTTAGGG 128279 .......... .......... .......... .......... .......... .......... 296 TTAGTAACTC AAACACCAGA TGTACAAAAT ACCCAAAGTT CCAAACTTTA TTGTTTCATT 128219 .......... .......... .......... .......... .......... .......... 296 CAAGAAAAGA GTACCAAATC ATAGAATTTT AAGCTATACC CAATAAATGC ACTTTAATTA 128159 .......... .......... .......... .......... .......... .......... 296 CTTTCTTGTT TTAAGAAGAT ACTGAGTAAG TATTTAAAAT GCTTTTGTTT AGTCAAGATC 128099 .......... .......... .......... .......... .......... .......... 296 GAAATCTTGT ATTTTTGATA ATTGAACCTC ATTTGAGAAA AGGCAAAAGG GTGTCTGGAG 128039 .......... .......... .......... .......... .......... .......... 296 AAGTAGAGAT CAACAAGTTC CAAGATTGGA TCCAGCTATG ATAATGTTTG AGTGTTTGTG 127979 .......... .......... .......... .......... .......... .......... 296 CTGGGGAACA TGAGAAAATT AGGTACATTT GTTCATTGTG TTGTTTTAGT TTGGTGTTTT 127919 .......... .......... .......... .......... .......... .......... 296 TGTTTGATTG AATTGGAATT GGTATCTCCC ATCACTGAAA AGGAGATCCT TCTTCAGTTC 127859 .......... .......... .......... .......... .......... .......... 296 AAGGGTAACA TTTCTACTGA CCCTTTTAAT AGTTTAGCTT CTTGGGATCC TAATGGAACT 127799 .......... .......... .......... .......... .......... .......... 296 CCTTGCCTAG ACTTTAGTGG TGTTTTCTGC AATTCTGTTG GAAATGTGGT GAAGATTGTG 127739 .......... .......... .......... .......... .......... .......... 296 TTGTGGAACA CTAGTCTTGG TGGGGTTCTC TCCCCTGCCT TAGCAGAACT TAAGTCTTTG 127679 .......... .......... .......... .......... .......... .......... 296 CGCATCCTTA CCTTGTTTGG GAACCAATTT ACTGGCAATA TTCCTGCAGA GTATGGGGGG 127619 .......... .......... .......... .......... .......... .......... 296 ATTGATTCAT TGTGGAAGAT TAACTTCAGC TCTAATGCCT TTTCTGGTTC AATTCCTGAA 127559 .......... .......... .......... .......... .......... .......... 296 TTTCTTGGGG ATTTACCTAA TATAAGGTTC CTTGATTTGT CAAGAAATGT GTATAGTGGT 127499 .......... .......... .......... .......... .......... .......... 296 GAAATTCCTG TGTCTTTGTT TGTGAATTGT AACAAAACAA GGTTCATTTC CTTGTCCCAT 127439 .......... .......... .......... .......... .......... .......... 296 AACAATCTTT CAGGTTCAAT TCCAGCATCA ATTGGAAACT GTCAGAGTCT TGAAGGAATA 127379 .......... .......... .......... .......... .......... .......... 296 GACTTGTCTT TTAATGGTCT AAGTGGAAGT TTACCTTCAC AAATTTGTGA CATTCCAGGA 127319 .......... .......... .......... .......... .......... .......... 296 TTAGTGTACT TGTCTGTGAG GAGCAATGCA CTATCAGGAC TTGTTCAAGA ACAGGTTTCT 127259 .......... .......... .......... .......... .......... .......... 296 CCATGTCAAA GGTTGGAGCT TTTGGATCTT GGTAGCAATG AGTTCTCTGG TTTGGCTCCT 127199 .......... .......... .......... .......... .......... .......... 296 TTCGGAGTTC TTGAGCTGGT GAATCTTACA TATTTCAATG TTTCAAATAA TGATTTTGAA 127139 .......... .......... .......... .......... .......... .......... 296 GGGGAGATTG TTAACTCTGG AACTTGTAGC CAGAGACTGG AAGTGTTGGA TGTTTCAAGG 127079 .......... .......... .......... .......... .......... .......... 296 AATAATTTTT TTGGCGAAAT TCCCTTGAGC ATCTCGAAAT GCAACACGTT GAAATACTTG 127019 .......... .......... .......... .......... .......... .......... 296 GACATGGCAT ATAACAGAAT TAATGGAAGT ATCCCTATTG AGCTTGCAGA TTTGAAAAGC 126959 .......... .......... .......... .......... .......... .......... 296 CTTTCCGTTA TTCGATTGGG TGATAATTTG TTAGGCGGGA CAATTCCAGC CGAACTTGGT 126899 .......... .......... .......... .......... .......... .......... 296 GGTATCGAAT GGCTTGCAGT TTTGGACCTC CATAATCTCA CCCTATTTGG TGAAATCCCA 126839 .......... .......... .......... .......... .......... .......... 296 TATGAGATAA GCAACTGCAA GCTTCTTCTT CAACTGTGAG TATATTACCA TCTTAGTTTA 126779 .......... .......... .......... .......... .......... .......... 296 ATTTGTTCAT TTCGTCATTG CTTTGAACTG GAATTGAAAC GTCTAATATT TGCTGCAGGG 126719 | .......... .......... .......... .......... .......... ........TG 298 ATCTATCTGG GAATCTTTTA GTAGGAGAAA TACCACAAAA 126679 | || | |||| |||| | | | ||| || ||| || AACTCTACAT GAAT-TTTTC G-ATCA-AAA TA-AACATAA 334 hqPGS_C08HBa0165B06.1-_SGN-E204223- (129475 129229) ******************************************************************************** EST sequence 55 -strand 554 n (File: SGN-E374844-) 1 AAAAAAAAAA CTTATATTAA GCCAAAAGTT AAAAGCTGGG GTAGGGGTGC TTTTTTTTTA 61 GCTTATAAGC TGTTTTAAGT TGACCACATT TTTATCTTTT TGCCCTTAAT ATTTTTATAC 121 AATCTCCAAA TTATCCACAT AACTCTAACA TCTCTTTCTT CCATTTTTCC ATTTTCACGT 181 TTGGCATAGC AACTTCAACA CTTTTATCCA AATGCATAAC TTTTAAAAGT ACTTTTTTAA 241 AGCTAAGTCC ATCCAAACGG GCCCTAAGAA TGAACTCTAC ATGAATTTTT CGATCAAAAT 301 AAACATAATT TTGTATAATT AATTATTTTT AAAAAATTTA TGATTAAACG AGAGTTTAGA 361 GAGTTGATTA CCAAGTAGAG CAACAGTTCC TTCAGTATCA ACACCAATTG ATTGAAATCT 421 TGAAAGCACA GATGAGATTG AATCGTTGTG ATTAGGGAGG TACTTCTCAA CTTCTGAAAA 481 GTAAGTTTCC TTGCTATCTT TCCTTCCTGT TTTCATTTCA ATTTTTATTG GCCCTCCTAA 541 CCAAAGAAGA CCAT Predicted gene structure (within gDNA segment 130206 to 124759): Exon 1 129450 129229 ( 222 n); cDNA 3 221 ( 219 n); score: 0.923 Intron 1 129228 128796 ( 433 n); Pd: 0.000 (s: 0.88), Pa: 0.786 (s: 0.45) Exon 2 128795 128747 ( 49 n); cDNA 222 270 ( 49 n); score: 0.449 Intron 2 128746 126721 (2026 n); Pd: 0.828 (s: 0.45), Pa: 0.999 (s: 0.62) Exon 3 126720 126679 ( 42 n); cDNA 271 308 ( 38 n); score: 0.619 MATCH C08HBa0165B06.1- SGN-E374844- 0.923 313 0.565 C PGS_C08HBa0165B06.1-_SGN-E374844- (129450 129229,128795 128747,126720 126679) Alignment (genomic DNA sequence = upper lines): AAAAAAAACT TATTTTAAGC CAAAAGTTAA AAGCTGGGGT AGGGGTGCTT TTTTTTTTTT 129391 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||| ||||||||| AAAAAAAACT TATATTAAGC CAAAAGTTAA AAGCTGGGGT AGGGGTGC-- -TTTTTTTTT 59 AGCTTATAAG CTGTTTTAAG TTGACCACAT TTTTATGTTT TTTCCCTTAA TATTTTTATA 129331 |||||||||| |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| AGCTTATAAG CTGTTTTAAG TTGACCACAT TTTTATCTTT TTGCCCTTAA TATTTTTATA 119 CAATCTCCAA ATTACCCATA TAACCCTAAC ATCTCTTTCT TCTATTTTTC CCTCTTCACG 129271 |||||||||| |||| ||| | |||| ||||| |||||||||| || ||||||| | | |||||| CAATCTCCAA ATTATCCACA TAACTCTAAC ATCTCTTTCT TCCATTTTTC CATTTTCACG 179 TTTGACATAA CAACTTCAGC ACTTTTATCT AAACGCATAA CTGCTTATTT TAAAAATAAG 129211 |||| |||| |||||||| | ||||||||| ||| |||||| || TTTGGCATAG CAACTTCAAC ACTTTTATCC AAATGCATAA CT........ .......... 221 TTTCAGCACT TTCAAAAGTA CTTTTTTTAA AGCTGCTTTT ATTAAGCCCA TCCAAACGGT 129151 .......... .......... .......... .......... .......... .......... 221 AGAGTCCGTT AGTTCGAGCG ATCTTGTATA TATACATCAG AAGACATGGT TAATGCAACC 129091 .......... .......... .......... .......... .......... .......... 221 TTGTTACATG TATATATATA ATTTACTTTT GAAGAATCTC ACACAAAGTT ACCGACATTT 129031 .......... .......... .......... .......... .......... .......... 221 ATAGAGTTAT TCCATCAATC GGAGTGACAT TTTTAGAGTT GTTACATGTA TATATATCTT 128971 .......... .......... .......... .......... .......... .......... 221 GCTTTTTTAT ACATATATTT TTAATTAAAA ATAGGAAAAA TGTAGAATTA TCCCTGATCT 128911 .......... .......... .......... .......... .......... .......... 221 TTACTCGAAA TCTCAGAGAT ACACTTATAC TACACTACCT ATTATTTCCT CAAATTATTG 128851 .......... .......... .......... .......... .......... .......... 221 TATAACTAAT TTTCTACCTC TTTTTGATAT ACGTGGCACT ATCTTGTGGG TTCAGTGCGT 128791 | .......... .......... .......... .......... .......... .....TTTAA 226 GTTGACATTT TTTTTTCAAA CTAGTGTCAC GTAGGCCGAA AAAAGTAAAA AATTATGTAT 128731 || ||| || | || | || |||| | | || AAGTACTTTT TTAAAGCTAA GTCCATCCAA ACGGGCCCTA AGAA...... .......... 270 TAAATAAGTT CAAAAATAAT AAAATTTTAA TATATTACAA GTATATCTCT AAAAATTCAA 128671 .......... .......... .......... .......... .......... .......... 270 ACGTAAATTC AAAAATACTT ATATATTTTT TCTTAAAAAA TAATAAATTC AGTTTGAACC 128611 .......... .......... .......... .......... .......... .......... 270 AGTAAAACTC GCCCTAAATC TTTCATTCTT GAGTGTGGTT AAAAGGAGAA GATGACCATG 128551 .......... .......... .......... .......... .......... .......... 270 TGGAGACAAC CGTCAAAAAT ATTTCAGCAG TTTCTCTATT AAATCAAAAC AAAAAAAAAA 128491 .......... .......... .......... .......... .......... .......... 270 CTGGCAGATC AACAACCTTT TTCAGCAAAG CCAGGCATTT TCACCTTGCA TCCCACTAGT 128431 .......... .......... .......... .......... .......... .......... 270 TTTGTACTCT GTTTTGCATG TCATTGCCAG CCAGACTAGT AATAGCAGTT CTAAAAATTT 128371 .......... .......... .......... .......... .......... .......... 270 CATTTTTTTT GTTTTGGGGT TCTCTCTTCT TAAGCCCACT TTCTTGAAAT CTTCATTTTT 128311 .......... .......... .......... .......... .......... .......... 270 CTTGAAATTC TGCAAAATTA TAGAATTTAG GGTTAGTAAC TCAAACACCA GATGTACAAA 128251 .......... .......... .......... .......... .......... .......... 270 ATACCCAAAG TTCCAAACTT TATTGTTTCA TTCAAGAAAA GAGTACCAAA TCATAGAATT 128191 .......... .......... .......... .......... .......... .......... 270 TTAAGCTATA CCCAATAAAT GCACTTTAAT TACTTTCTTG TTTTAAGAAG ATACTGAGTA 128131 .......... .......... .......... .......... .......... .......... 270 AGTATTTAAA ATGCTTTTGT TTAGTCAAGA TCGAAATCTT GTATTTTTGA TAATTGAACC 128071 .......... .......... .......... .......... .......... .......... 270 TCATTTGAGA AAAGGCAAAA GGGTGTCTGG AGAAGTAGAG ATCAACAAGT TCCAAGATTG 128011 .......... .......... .......... .......... .......... .......... 270 GATCCAGCTA TGATAATGTT TGAGTGTTTG TGCTGGGGAA CATGAGAAAA TTAGGTACAT 127951 .......... .......... .......... .......... .......... .......... 270 TTGTTCATTG TGTTGTTTTA GTTTGGTGTT TTTGTTTGAT TGAATTGGAA TTGGTATCTC 127891 .......... .......... .......... .......... .......... .......... 270 CCATCACTGA AAAGGAGATC CTTCTTCAGT TCAAGGGTAA CATTTCTACT GACCCTTTTA 127831 .......... .......... .......... .......... .......... .......... 270 ATAGTTTAGC TTCTTGGGAT CCTAATGGAA CTCCTTGCCT AGACTTTAGT GGTGTTTTCT 127771 .......... .......... .......... .......... .......... .......... 270 GCAATTCTGT TGGAAATGTG GTGAAGATTG TGTTGTGGAA CACTAGTCTT GGTGGGGTTC 127711 .......... .......... .......... .......... .......... .......... 270 TCTCCCCTGC CTTAGCAGAA CTTAAGTCTT TGCGCATCCT TACCTTGTTT GGGAACCAAT 127651 .......... .......... .......... .......... .......... .......... 270 TTACTGGCAA TATTCCTGCA GAGTATGGGG GGATTGATTC ATTGTGGAAG ATTAACTTCA 127591 .......... .......... .......... .......... .......... .......... 270 GCTCTAATGC CTTTTCTGGT TCAATTCCTG AATTTCTTGG GGATTTACCT AATATAAGGT 127531 .......... .......... .......... .......... .......... .......... 270 TCCTTGATTT GTCAAGAAAT GTGTATAGTG GTGAAATTCC TGTGTCTTTG TTTGTGAATT 127471 .......... .......... .......... .......... .......... .......... 270 GTAACAAAAC AAGGTTCATT TCCTTGTCCC ATAACAATCT TTCAGGTTCA ATTCCAGCAT 127411 .......... .......... .......... .......... .......... .......... 270 CAATTGGAAA CTGTCAGAGT CTTGAAGGAA TAGACTTGTC TTTTAATGGT CTAAGTGGAA 127351 .......... .......... .......... .......... .......... .......... 270 GTTTACCTTC ACAAATTTGT GACATTCCAG GATTAGTGTA CTTGTCTGTG AGGAGCAATG 127291 .......... .......... .......... .......... .......... .......... 270 CACTATCAGG ACTTGTTCAA GAACAGGTTT CTCCATGTCA AAGGTTGGAG CTTTTGGATC 127231 .......... .......... .......... .......... .......... .......... 270 TTGGTAGCAA TGAGTTCTCT GGTTTGGCTC CTTTCGGAGT TCTTGAGCTG GTGAATCTTA 127171 .......... .......... .......... .......... .......... .......... 270 CATATTTCAA TGTTTCAAAT AATGATTTTG AAGGGGAGAT TGTTAACTCT GGAACTTGTA 127111 .......... .......... .......... .......... .......... .......... 270 GCCAGAGACT GGAAGTGTTG GATGTTTCAA GGAATAATTT TTTTGGCGAA ATTCCCTTGA 127051 .......... .......... .......... .......... .......... .......... 270 GCATCTCGAA ATGCAACACG TTGAAATACT TGGACATGGC ATATAACAGA ATTAATGGAA 126991 .......... .......... .......... .......... .......... .......... 270 GTATCCCTAT TGAGCTTGCA GATTTGAAAA GCCTTTCCGT TATTCGATTG GGTGATAATT 126931 .......... .......... .......... .......... .......... .......... 270 TGTTAGGCGG GACAATTCCA GCCGAACTTG GTGGTATCGA ATGGCTTGCA GTTTTGGACC 126871 .......... .......... .......... .......... .......... .......... 270 TCCATAATCT CACCCTATTT GGTGAAATCC CATATGAGAT AAGCAACTGC AAGCTTCTTC 126811 .......... .......... .......... .......... .......... .......... 270 TTCAACTGTG AGTATATTAC CATCTTAGTT TAATTTGTTC ATTTCGTCAT TGCTTTGAAC 126751 .......... .......... .......... .......... .......... .......... 270 TGGAATTGAA ACGTCTAATA TTTGCTGCAG GGATCTATCT GGGAATCTTT TAGTAGGAGA 126691 || || | |||| ||| | | | | | .......... .......... .......... TGAACTCTAC ATGAAT-TTT TCG-ATCA-A 297 AATACCACAA AA 126679 |||| ||| || AATA-AACAT AA 308 hqPGS_C08HBa0165B06.1-_SGN-E374844- (129450 129229) ******************************************************************************** EST sequence 381 +strand 618 n (File: SGN-E249253+) 1 GGTTACCAGT TCAAGTCCCG TTTCCGGCAA CTTTTCCGGT TATTAAGCTG TTCCGCCGCT 61 GAGCACACTG ATTTAACTTC AGATTTACCC AATACAGAGG TGATTGAAAG CTATGGCTTC 121 CAAGGTATCC ATCATTTCAA AATGGACGGT TAAAGCTGAG GGAAAAAGTC AGCACCATAC 181 AGATAATTGT AAGATTATTG AGTTGACACC ATGGGACATT CTTGAGCTTC AAATTGACTA 241 CTTTCAAACT GGACTCCTCT TCCTCATGCC TGCATTTGAA CAAGTAAGAG ATCTACTAAA 301 AACAACCAAC ACCAGTTCCT TAATTGATCA TCTTAGAGTT TCACTATCTC GAGCTTTAGA 361 GCCTGTTTGG CTCAGCTTAA AAGCTGGTCA AACTGACTTA AAAGCTGGTT TTTGACTTAT 421 TTAAATGTTT GGCAATACTC AAAATAGCTT ATTTTAAGTT AAAAAAACTT ATTTTAAGCC 481 AAAAGTGTGC CTTTTTTTTT TAGCTTATAA GCTGTTTTAA GTTGACCATA TTTTTATGTT 541 TTTTCCCTTA ATATTTTTAT ACAATCTCCA AATTACCCAT ATAACACTAA CTTCTCTTTC 601 TTCTATTTTT CCCTTTTC Predicted gene structure (within gDNA segment 130549 to 128628): Exon 1 129556 129274 ( 283 n); cDNA 355 618 ( 264 n); score: 0.908 MATCH C08HBa0165B06.1- SGN-E249253+ 0.908 283 0.458 C PGS_C08HBa0165B06.1-_SGN-E249253+ (129556 129274) Alignment (genomic DNA sequence = upper lines): TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT GACTTAAAAG CTGGTTTTTG 129497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT GACTTAAAAG CTGGTTTTTG 414 ACTTATTTAA CTGTTTGACA ATACTCAAAA TAGCTTATTT TAAGTTAAAA AAAACTTATT 129437 |||||||||| |||||| || |||||||||| |||||||||| |||||| ||| |||||||||| ACTTATTTAA ATGTTTGGCA ATACTCAAAA TAGCTTATTT TAAGTT-AAA AAAACTTATT 473 TTAAGCCAAA AGTTAAAAGC TGGGGTAGGG GTGCTTTTTT TTTTTTAGCT TATAAGCTGT 129377 ||||||| |||| || |||| |||| |||||||||| |||||||||| TTAAGCC--- ----AAAA-- ----GT---- GTGC-CTTTT TTTTTTAGCT TATAAGCTGT 515 TTTAAGTTGA CCACATTTTT ATGTTTTTTC CCTTAATATT TTTATACAAT CTCCAAATTA 129317 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAGTTGA CCATATTTTT ATGTTTTTTC CCTTAATATT TTTATACAAT CTCCAAATTA 575 CCCATATAAC CCTAACATCT CTTTCTTCTA TTTTTCCCTC TTC 129274 |||||||||| ||||| ||| |||||||||| ||||||||| ||| CCCATATAAC ACTAACTTCT CTTTCTTCTA TTTTTCCCTT TTC 618 hqPGS_C08HBa0165B06.1-_SGN-E249253+ (129556 129274) ******************************************************************************** EST sequence 14 -strand 528 n (File: SGN-E242674-) 1 GGTATTTAAG TGGAGATACG TAAAAAGACA AAATTATTAT CTCTGTGTTA CATAGTTGCA 61 AGTTGCAACT ATTTCTAACA ATCGACTCTA GATGATTTTT TTCGATTAAA ATAATAAAAA 121 AAGAAATTTA TATGAATAGT TATTTTTTTA ACCAAAGTGC ATAAATTGGA AACTCATAAA 181 TTTGTGACTT AGGTTACATG GTTGAGAACT GCCTCAAACT TATAATGTCT ACTATTTAAG 241 TGGAGATACG TAAAAGAAAA AATTATTGTC TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT 301 GATCAAACTG ACTTAAAAAC TGATTTTTGA CTTATTTAGT TGTTTGGCAA TACTCAAAAT 361 AACTTATTTT AAGTTAAAAA AAAAAACTTA TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG 421 GGGTGCTTTT TTTTTAGCTT ATAAGCTGTT TTAAGTTGAC CACATTTTTA TCTTTTTGCC 481 CTTAATATTT TTATACAATC TCCAAATTAT CCACATAACT CTAACATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129914 129887 ( 28 n); cDNA 221 248 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129298 ( 279 n); cDNA 249 528 ( 280 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E242674- 0.860 307 0.581 C PGS_C08HBa0165B06.1-_SGN-E242674- (129914 129887,129576 129298) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 248 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 248 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 248 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 248 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 248 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 270 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 330 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 390 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 447 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 507 TACCCATATA ACCCTAACAT C 129298 || ||| ||| || ||||||| | TATCCACATA ACTCTAACAT C 528 hqPGS_C08HBa0165B06.1-_SGN-E242674- (129576 129298) ******************************************************************************** EST sequence 47 -strand 643 n (File: SGN-E233074-) 1 TAGGTGTTAG TTGATAAATA TTAAGCGTTA AATTCGATTT TTTATATATA AGTTTTCTAG 61 TGCTTAAATA TAATTGGGAA GGTCAAGGGG TTTGTGACTT AAGTTAGTGA TGTCTGGTAT 121 TTAAGTGGAG ATACGTAAAA AGACAAAATT ATTATCTCTG TGTTACATAG TTGCAAGTTG 181 CAACTATTTC TAACAATCGA CTCTAGATGA TTTTTTTCGA TTAAAATAAT AAAAAAAGAA 241 ATTTATATGA ATAGTTATTT TTTTAACCAA AGTGCATAAA TTGGAAACTC ATAAATTTGT 301 GACTTAGGTT ACATGGTTGA GAACTGCCTC AAACTTATAA TGTCTACTAT TTAAGTGGAG 361 ATACGTAAAA GAAAAAATTA TTGTCTAAGA GCTTGTTTAG TTCAGCTTAA AAGCTGATCA 421 AACTGACTTA AAAACTGATT TTTGACTTAT TTAGTTGTTT GGCAATACTC AAAATAACTT 481 ATTTTAAGTT AAAAAAAAAA ACTTATTTTA AGCCAAAAGT TAAAAGCTGG GGTAGGGGTG 541 CTTTTTTTTT AGCTTATAAG CTGTTTTAAG TTGACCACAT TTTTATCTTT TTGCCCTTAA 601 TATTTTTATA CAATCTCCAA ATTATCCACA TAACTCTAAC ATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129914 129887 ( 28 n); cDNA 336 363 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129298 ( 279 n); cDNA 364 643 ( 280 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E233074- 0.860 307 0.477 C PGS_C08HBa0165B06.1-_SGN-E233074- (129914 129887,129576 129298) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 363 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 363 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 363 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 363 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 363 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 385 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 445 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 505 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 562 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 622 TACCCATATA ACCCTAACAT C 129298 || ||| ||| || ||||||| | TATCCACATA ACTCTAACAT C 643 hqPGS_C08HBa0165B06.1-_SGN-E233074- (129576 129298) ******************************************************************************** EST sequence 81 -strand 514 n (File: SGN-E233735-) 1 GATACGTAAA AAGACAAAAT TATTATCTCT GTGTTACATA GTTGCAAGTT GCAACTATTT 61 CTAACAATCG ACTCTAGATG ATTTTTTTCG ATTAAAATAA TAAAAAAAGA AATTTATATG 121 AATAGTTATT TTTTTAACCA AAGTGCATAA ATTGGAAACT CATAAATTTG TGACTTAGGT 181 TACATGGTTG AGAACTGCCT CAAACTTATA ATGTCTACTA TTTAAGTGGA GATACGTAAA 241 AGAAAAAATT ATTGTCTAAG AGCTTGTTTA GTTCAGCTTA AAAGCTGATC AAACTGACTT 301 AAAAACTGAT TTTTGACTTA TTTAGTTGTT TGGCAATACT CAAAATAACT TATTTTAAGT 361 TAAAAAAAAA AACTTATTTT AAGCCAAAAG TTAAAAGCTG GGGTAGGGGT GCTTTTTTTT 421 TAGCTTATAA GCTGTTTTAA GTTGACCACA TTTTTATCTT TTTGCCCTTA ATATTTTTAT 481 ACAATCTCCA AATTATCCAC ATAACTCTAA CATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129914 129887 ( 28 n); cDNA 207 234 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129298 ( 279 n); cDNA 235 514 ( 280 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E233735- 0.860 307 0.597 C PGS_C08HBa0165B06.1-_SGN-E233735- (129914 129887,129576 129298) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 234 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 234 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 234 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 234 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 234 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 256 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 316 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 376 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 433 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 493 TACCCATATA ACCCTAACAT C 129298 || ||| ||| || ||||||| | TATCCACATA ACTCTAACAT C 514 hqPGS_C08HBa0165B06.1-_SGN-E233735- (129576 129298) ******************************************************************************** EST sequence 82 -strand 484 n (File: SGN-E377238-) 1 GTGTTACATA GTTGCAAGTT GCAACTATTT CTAACAATCG ACTCTAGATG ATTTTTTTCG 61 ATTAAAATAA TAAAAAAAGA AATTTATATG AATAGTTATT TTTTTAACCA AAGTGCATAA 121 ATTGGAAACT CATAAATTTG TGACTTAGGT TACATGGTTG AGAACTGCCT CAAACTTATA 181 ATGTCTACTA TTTAAGTGGA GATACGTAAA AGAAAAAATT ATTGTCTAAG AGCTTGTTTA 241 GTTCAGCTTA AAAGCTGATC AAACTGACTT AAAAACTGAT TTTTGACTTA TTTAGTTGTT 301 TGGCAATACT CAAAATAACT TATTTTAAGT TAAAAAAAAA AACTTATTTT AAGCCAAAAG 361 TTAAAAGCTG GGGTAGGGGT GCTTTTTTTT TAGCTTATAA GCTGTTTTAA GTTGACCACA 421 TTTTTATCTT TTTGCCCTTA ATATTTTTAT ACAATCTCCA AATTATCCAC ATAACTCTAA 481 CATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129914 129887 ( 28 n); cDNA 177 204 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129298 ( 279 n); cDNA 205 484 ( 280 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E377238- 0.860 307 0.634 C PGS_C08HBa0165B06.1-_SGN-E377238- (129914 129887,129576 129298) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 204 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 204 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 204 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 204 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 204 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 226 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 286 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 346 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 403 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 463 TACCCATATA ACCCTAACAT C 129298 || ||| ||| || ||||||| | TATCCACATA ACTCTAACAT C 484 hqPGS_C08HBa0165B06.1-_SGN-E377238- (129576 129298) ******************************************************************************** EST sequence 121 -strand 434 n (File: SGN-E240879-) 1 ATTTTTTTCG ATTAAAATAA TAAAAAAAGA AATTTATATG AATAGTTATT TTTTTAACCA 61 AAGTGCATAA ATTGGAAACT CATAAATTTG TGACTTAGGT TACATGGTTG AGAACTGCCT 121 CAAACTTATA ATGTCTACTA TTTAAGTGGA GATACGTAAA AGAAAAAATT ATTGTCTAAG 181 AGCTTGTTTA GTTCAGCTTA AAAGCTGATC AAACTGACTT AAAAACTGAT TTTTGACTTA 241 TTTAGTTGTT TGGCAATACT CAAAATAACT TATTTTAAGT TAAAAAAAAA AACTTATTTT 301 AAGCCAAAAG TTAAAAGCTG GGGTAGGGGT GCTTTTTTTT TAGCTTATAA GCTGTTTTAA 361 GTTGACCACA TTTTTATCTT TTTGCCCTTA ATATTTTTAT ACAATCTCCA AATTATCCAC 421 ATAACTCTAA CATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129914 129887 ( 28 n); cDNA 127 154 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129298 ( 279 n); cDNA 155 434 ( 280 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E240879- 0.860 307 0.707 C PGS_C08HBa0165B06.1-_SGN-E240879- (129914 129887,129576 129298) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 154 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 154 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 154 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 154 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 154 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 176 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 236 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 296 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 353 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 413 TACCCATATA ACCCTAACAT C 129298 || ||| ||| || ||||||| | TATCCACATA ACTCTAACAT C 434 hqPGS_C08HBa0165B06.1-_SGN-E240879- (129576 129298) ******************************************************************************** EST sequence 78 -strand 310 n (File: SGN-E233594-) 1 CTTATAATGT CTACTATTTA AGTGGAGATA CGTAAAAGAA AAAATTATTG TCTAAGAGCT 61 TGTTTAGTTC AGCTTAAAAG CTGATCAAAC TGACTTAAAA ACTGATTTTT GACTTATTTA 121 GTTGTTTGGC AATACTCAAA ATAACTTATT TTAAGTTAAA AAAAAAAACT TATTTTAAGC 181 CAAAAGTTAA AAGCTGGGGT AGGGGTGCTT TTTTTTTAGC TTATAAGCTG TTTTAAGTTG 241 ACCACATTTT TATCTTTTTG CCCTTAATAT TTTTATACAA TCTCCAAATT ATCCACATAA 301 CTCTAACATC Predicted gene structure (within gDNA segment 130549 to 128527): Exon 1 129551 129298 ( 254 n); cDNA 57 310 ( 254 n); score: 0.900 MATCH C08HBa0165B06.1- SGN-E233594- 0.900 254 0.819 C PGS_C08HBa0165B06.1-_SGN-E233594- (129551 129298) Alignment (genomic DNA sequence = upper lines): AGCCTGTTTG GCTCAGCTTA AAAGCTGGTC AAACTGACTT AAAAGCTGGT TTTTGACTTA 129492 ||| ||||| | |||||||| ||||||| || |||||||||| |||| ||| | |||||||||| AGCTTGTTTA GTTCAGCTTA AAAGCTGATC AAACTGACTT AAAAACTGAT TTTTGACTTA 116 TTTAACTGTT TGACAATACT CAAAATAGCT TATTTTAAGT T---AAAAAA AACTTATTTT 129435 |||| |||| || ||||||| ||||||| || |||||||||| | |||||| |||||||||| TTTAGTTGTT TGGCAATACT CAAAATAACT TATTTTAAGT TAAAAAAAAA AACTTATTTT 176 AAGCCAAAAG TTAAAAGCTG GGGTAGGGGT GCTTTTTTTT TTTTAGCTTA TAAGCTGTTT 129375 |||||||||| |||||||||| |||||||||| || ||||| |||||||||| |||||||||| AAGCCAAAAG TTAAAAGCTG GGGTAGGGGT GC---TTTTT TTTTAGCTTA TAAGCTGTTT 233 TAAGTTGACC ACATTTTTAT GTTTTTTCCC TTAATATTTT TATACAATCT CCAAATTACC 129315 |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| |||||||| | TAAGTTGACC ACATTTTTAT CTTTTTGCCC TTAATATTTT TATACAATCT CCAAATTATC 293 CATATAACCC TAACATC 129298 || ||||| | ||||||| CACATAACTC TAACATC 310 hqPGS_C08HBa0165B06.1-_SGN-E233594- (129551 129298) ******************************************************************************** EST sequence 95 -strand 666 n (File: SGN-E237992-) 1 TTTCCAAATG AAACAAAAGA CAATTAGGTG TTAGTTGATA AATATTAAGC GTTAAATTCG 61 ATTTTTTATA TATAAGTTTT CTAGTGCTTA AATATAATTG GGAAGGTCAA GGGGTTTGTG 121 ACTTAAGTTA GTGATGTCTG GTATTTAAGT GGAGATACGT AAAAAGACAA AATTATTATC 181 TCTGTGTTAC ATAGTTGCAA GTTGCAACTA TTTCTAACAA TCGACTCTAG ATGATTTTTT 241 TCGATTAAAA TAATAAAAAA AGAAATTTAT ATGAATAGTT ATTTTTTTAA CCAAAGTGCA 301 TAAATTGGAA ACTCATAAAT TTGTGACTTA GGTTACATGG TTGAGAACTG CCTCAAACTT 361 ATAATGTCTA CTATTTAAGT GGAGATACGT AAAAGAAAAA ATTATTGTCT AAGAGCTTGT 421 TTAGTTCAGC TTAAAAGCTG ATCAAACTGA CTTAAAAACT GATTTTTGAC TTATTTAGTT 481 GTTTGGCAAT ACTCAAAATA ACTTATTTTA AGTTAAAAAA AAAAACTTAT TTTAAGCCAA 541 AAGTTAAAAG CTGGGGTAGG GGTGCTTTTT TTTTAGCTTA TAAGCTGTTT TAAGTTGACC 601 ACATTTTTAT CTTTTTGCCC TTAATATTTT TATACAATCT CCAAATTATC CACATAACTC 661 TAACAT Predicted gene structure (within gDNA segment 130549 to 128537): Exon 1 129914 129887 ( 28 n); cDNA 360 387 ( 28 n); score: 0.607 Intron 1 129886 129577 ( 310 n); Pd: 0.000 (s: 0), Pa: 0.756 (s: 0.66) Exon 2 129576 129299 ( 278 n); cDNA 388 666 ( 279 n); score: 0.860 MATCH C08HBa0165B06.1- SGN-E237992- 0.860 306 0.459 C PGS_C08HBa0165B06.1-_SGN-E237992- (129914 129887,129576 129299) Alignment (genomic DNA sequence = upper lines): TATGATTCAT ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC 129855 ||| || | ||| | ||| |||| TATAATGTCT ACTATTTAAG TGGAGATA.. .......... .......... .......... 387 TTTTTGTTTG TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT 129795 .......... .......... .......... .......... .......... .......... 387 TTCTATACTA ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG 129735 .......... .......... .......... .......... .......... .......... 387 TTGCATTCGT ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT 129675 .......... .......... .......... .......... .......... .......... 387 GTGTGTGTGC TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT 129615 .......... .......... .......... .......... .......... .......... 387 TAAAGGACTA TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTAT- 129556 | || || || ||| | .......... .......... .......... ........CG TAAAAGAAAA AATTATTGTC 409 TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTCAAACTG ACTTAAAAGC TGGTTTTTGA 129496 | ||||| || ||| | |||| |||||||||| | |||||||| |||||||| | || ||||||| TAAGAGCTTG TTTAGTTCAG CTTAAAAGCT GATCAAACTG ACTTAAAAAC TGATTTTTGA 469 CTTATTTAAC TGTTTGACAA TACTCAAAAT AGCTTATTTT AAGTT---AA AAAAAACTTA 129439 |||||||| |||||| ||| |||||||||| | |||||||| ||||| || |||||||||| CTTATTTAGT TGTTTGGCAA TACTCAAAAT AACTTATTTT AAGTTAAAAA AAAAAACTTA 529 TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGCTTTT TTTTTTTTAG CTTATAAGCT 129379 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| TTTTAAGCCA AAAGTTAAAA GCTGGGGTAG GGGTGC---T TTTTTTTTAG CTTATAAGCT 586 GTTTTAAGTT GACCACATTT TTATGTTTTT TCCCTTAATA TTTTTATACA ATCTCCAAAT 129319 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| GTTTTAAGTT GACCACATTT TTATCTTTTT GCCCTTAATA TTTTTATACA ATCTCCAAAT 646 TACCCATATA ACCCTAACAT 129299 || ||| ||| || ||||||| TATCCACATA ACTCTAACAT 666 hqPGS_C08HBa0165B06.1-_SGN-E237992- (129576 129299) ******************************************************************************** EST sequence 76 -strand 662 n (File: SGN-E376754-) 1 ACCCTACTAA AGCTGAGCTC CAGGACATGA TAAACGAGGT GGATGCAGAT GGTAATGGAA 61 CCATCGACTT CCCAGAGTTT CTAAACCTTA TGGCCAGGAA GATGAAGGAT ACTGACTCTG 121 AGGAGGAGTT GAAAGAGGCA TTCAGAGTTT TCGACAAGGA TCAAAATGGC TTCATCTCCG 181 CTGCTGAGCT TCGTCATGTG ATGACTAACC TTGGAGAGAA GCTTACTGAT GAAGAAGTCG 241 ATGAGATGAT TAGGGAAGCT GATGTTGATG GTGATGGACA AATCAACTAT GAGGAGTTTG 301 TTAAGGTCAT GATGGCCAAG TAATTCCATT ATCCTCTTGT TACATTTGAA GTTTAGACTT 361 GTCAAAAATG TGAAAAAATC CAAAAATAAT TCATTGGGTA GGCTCTTGTC TAGTATAATG 421 TTAGTCTTAC CATCTCGATG TATTGAACCT TCATTGAATG TAATGTTTTA TTGTATGAGT 481 GGTGTGATCT CTACTTATTT TCTTTAAGTT TGTGTACTTT CTTTGATCCT CTTAGAGCCT 541 GTTTGGCTCA GCTTAAAAAC TGGTCAAACT GACTTAAAAA GCTGGTTTTT GACTTATTTA 601 GCTGTTTGAC AATACTCAAA ATAACTTATT TTAAGTTAAA AAAAACTTAT TTTAAAAAAA 661 AA Predicted gene structure (within gDNA segment 130549 to 128763): Exon 1 130063 130019 ( 45 n); cDNA 490 535 ( 46 n); score: 0.678 Intron 1 130018 129552 ( 467 n); Pd: 0.000 (s: 0.68), Pa: 0.000 (s: 0.93) Exon 2 129551 129426 ( 126 n); cDNA 536 662 ( 127 n); score: 0.933 MATCH C08HBa0165B06.1- SGN-E376754- 0.933 171 0.258 C PGS_C08HBa0165B06.1-_SGN-E376754- (130063 130019,129551 129426) Alignment (genomic DNA sequence = upper lines): TCAACCTATT TTTTTTTTCT TTTTTTCATT TCATTGAT-C TTTTAGGTAC CTATCTGTCT 130005 || || |||| || ||| | || | | || || ||||| | | |||| TCTACTTATT TTCTTTAAGT TTGTGTACTT TCTTTGATCC TCTTAG.... .......... 535 ATAAGGAGTG TCTGGTGTGT GTAGTGATGC TAATGGTGGC TTGGTTGGTG AATAGAATAA 129945 .......... .......... .......... .......... .......... .......... 535 ATGCTTCTGT TCTTGCAACA GACCCTACCA TATGATTCAT ACTCACACTG TGGTGATAGT 129885 .......... .......... .......... .......... .......... .......... 535 GAACCATGAC ATATAACAAA TTGGCTTCTC TTTTTGTTTG TTATCCACAT AAAAATAAAA 129825 .......... .......... .......... .......... .......... .......... 535 CAATTTAAGT ATATATACTA ATTACTTCTT TTCTATACTA ACCATCAAAT TTATAATCAA 129765 .......... .......... .......... .......... .......... .......... 535 AGAATTAGGT GAGTTAGTTT AAAATTGTTG TTGCATTCGT ATCGTATCTT TTTAAGATGT 129705 .......... .......... .......... .......... .......... .......... 535 AGTACTATTT TTAAAGAATC TGACATGTAT GTGTGTGTGC TTTGTGTAAT TTTGTCTACG 129645 .......... .......... .......... .......... .......... .......... 535 TACAATTTGT ATAATCTTGT TATATACTTT TAAAGGACTA TACATATAAT ACATTGACAT 129585 .......... .......... .......... .......... .......... .......... 535 TTTTGAAGAG CAAGTGAGTC AAAGATTATT TAGAGCCTGT TTGGCTCAGC TTAAAAGCTG 129525 ||||||| |||||||||| |||||| ||| .......... .......... .......... ...AGCCTGT TTGGCTCAGC TTAAAAACTG 562 GTCAAACTGA CTTAAAA-GC TGGTTTTTGA CTTATTTAAC TGTTTGACAA TACTCAAAAT 129466 |||||||||| ||||||| || |||||||||| |||||||| | |||||||||| |||||||||| GTCAAACTGA CTTAAAAAGC TGGTTTTTGA CTTATTTAGC TGTTTGACAA TACTCAAAAT 622 AGCTTATTTT AAGTTAAAAA AAACTTATTT TAAGCCAAAA 129426 | |||||||| |||||||||| |||||||||| ||| |||| AACTTATTTT AAGTTAAAAA AAACTTATTT TAAAAAAAAA 662 hqPGS_C08HBa0165B06.1-_SGN-E376754- (129551 129426) ******************************************************************************** EST sequence 86 -strand 765 n (File: SGN-E377316-) 1 GAACGAAAGA AGGAAATTCA GGGTGAGGAA GTGAATAGGC TAAACGAATT GTTGGCTGAG 61 AGCCGAATCT TTTGCGATAT GCCTGCTTTA GCAGATAGAG ACAGCATTTT AATAAAAGAT 121 ACATGTCTTC AGAACTCTTT GATTTGCCAG CCACAGCAGC GAAATATCCA TGGTCGAATC 181 TTTGGAGGAT TCTTAATGCG GAGAGCTTTT GAGCTGGCTT ATGCAACAGC TTATGCATTT 241 GCAGGCAGTG CACCTTGCTT TGTGGAAGTT GATCATGTTG ATTTCTTGAA ACCTGTTGAT 301 GTTGGAAATT TCCTCCGCCT CAAATCATGT GTTTTGTACA CAGAACTAGA GAATTTATCT 361 AAGCCTCTGA TCAATGTAGA AGTGGTAGCT CATGTCATGA GACCTGAGTT GCGGTCTAGC 421 GAGGTTTCAA ACAATTTCTA TTTCACTTTC ACTGTCCAAC AAGATTCACT GAAAAATGGT 481 GCACGAGTTA GGAATGTCGT CCCTGGTACA GAGGAAGAAG CACGTCGTGT GATTGAACGG 541 ATGGATGCTG AAAATTCATG AAGTCTTCTT GACTAGCATC AATTGGCAGA TAAAGGACTG 601 AGGATACCTG ATTTTGGGTT TCAAACTCCC AGAAAAGCAA AGATGTCACA GTTATTTTAA 661 GCAGAGATAC TTAGAGCCTG TTTGGCTCAG CTTAAAAGCT GGTTTTTGAC TTATTTAACT 721 GTTTGGCAAT ACTCAAAATA GTTTTTTTTA ACTTAAAAAA AAAAA Predicted gene structure (within gDNA segment 130549 to 128480): Exon 1 129576 129443 ( 134 n); cDNA 636 762 ( 127 n); score: 0.754 MATCH C08HBa0165B06.1- SGN-E377316- 0.754 134 0.175 C PGS_C08HBa0165B06.1-_SGN-E377316- (129576 129443) Alignment (genomic DNA sequence = upper lines): AGCAAGTGAG TCAAAGATTA TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT 129517 ||||| | ||| || ||| ||| || | | | | | |||| | | || | AGCAAAGATG TCACAG-TTA TTTTAAG-CA G---AGAT-A -CTTAGAGCC TGTTTGGCTC 688 GACTTAAAAG CTGGTTTTTG ACTTATTTAA CTGTTTGACA ATACTCAAAA TAGCTTATTT 129457 |||||||| |||||||||| |||||||||| ||||||| || |||||||||| ||| || ||| AGCTTAAAAG CTGGTTTTTG ACTTATTTAA CTGTTTGGCA ATACTCAAAA TAGTTTTTTT 748 TAAGTTAAAA AAAA 129443 ||| |||||| |||| TAACTTAAAA AAAA 762 hqPGS_C08HBa0165B06.1-_SGN-E377316- (129576 129443) ******************************************************************************** EST sequence 137 +strand 387 n (File: SGN-E577960+) 1 CAAAAGTGTA AAACAAGCTC GAAACCTCTC AAAAATCATC CCCCAAATTC AACAAAACAC 61 TCGGAAATTC TGAGCCGAGC ATCCAAACCC CGAATGTTCA CCAAAGTCAA CCCAAAAGCC 121 CACAATTTCA CAACTTAGGA CCTCAAATCC TCAAAAAGAC TCAGAATACG AAACGAACAA 181 CTCTCACAAC TCAGATTCCA CATTCCGGTA CTGATGGTAT TGATGGAACT TTATTCCGAC 241 ACTCGAAGCT CCCAAAGGCT CCAAAAACCA CTTTTGAGCA ACTTAGAGCC TGTTTGGCTC 301 AGCTTAAAAG CTGGTCAAAC TGACTTAAAA GCTGGTTTTT GACTTATTTA ACTGTTTGGC 361 AATACTCAAA ACAGCTTATT TTAAGTT Predicted gene structure (within gDNA segment 130549 to 128580): Exon 1 129920 129893 ( 28 n); cDNA 249 275 ( 27 n); score: 0.607 Intron 1 129892 129564 ( 329 n); Pd: 0.227 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 129563 129451 ( 113 n); cDNA 276 387 ( 112 n); score: 0.938 MATCH C08HBa0165B06.1- SGN-E577960+ 0.938 141 0.364 C PGS_C08HBa0165B06.1-_SGN-E577960+ (129920 129893,129563 129451) Alignment (genomic DNA sequence = upper lines): CTACCATATG ATTCATACTC ACACTGTGGT GATAGTGAAC CATGACATAT AACAAATTGG 129861 || ||| | | | || | | |||| | CTCCCAAAGG CTCCAAAAAC -CACTTTT.. .......... .......... .......... 275 CTTCTCTTTT TGTTTGTTAT CCACATAAAA ATAAAACAAT TTAAGTATAT ATACTAATTA 129801 .......... .......... .......... .......... .......... .......... 275 CTTCTTTTCT ATACTAACCA TCAAATTTAT AATCAAAGAA TTAGGTGAGT TAGTTTAAAA 129741 .......... .......... .......... .......... .......... .......... 275 TTGTTGTTGC ATTCGTATCG TATCTTTTTA AGATGTAGTA CTATTTTTAA AGAATCTGAC 129681 .......... .......... .......... .......... .......... .......... 275 ATGTATGTGT GTGTGCTTTG TGTAATTTTG TCTACGTACA ATTTGTATAA TCTTGTTATA 129621 .......... .......... .......... .......... .......... .......... 275 TACTTTTAAA GGACTATACA TATAATACAT TGACATTTTT GAAGAGCAAG TGAGTCAAAG 129561 || .......... .......... .......... .......... .......... .......GAG 278 ATTATTTAGA GCCTGTTTGG CTCAGCTTAA AAGCTGGTCA AACTGACTTA AAAGCTGGTT 129501 | ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| -CAACTTAGA GCCTGTTTGG CTCAGCTTAA AAGCTGGTCA AACTGACTTA AAAGCTGGTT 337 TTTGACTTAT TTAACTGTTT GACAATACTC AAAATAGCTT ATTTTAAGTT 129451 |||||||||| |||||||||| | |||||||| |||| ||||| |||||||||| TTTGACTTAT TTAACTGTTT GGCAATACTC AAAACAGCTT ATTTTAAGTT 387 hqPGS_C08HBa0165B06.1-_SGN-E577960+ (129563 129451) ******************************************************************************** EST sequence 33 -strand 385 n (File: SGN-E217478-) 1 TGTCCAACAA GATTCACTGA AAAATGGTGC ACGAGTTAGG AATGTCGTCC CTGGTACAGA 61 GGAAGAAGCA CGTCGTGTGA TTGAACGGAT GGATGCTGAA AATTCATGAA GTCTTCTTGA 121 CTAGCATCAA TTGGCAGATA AAGGACTGAG GATACCTGAT TTTGGGTTTC AAACTCCCAG 181 AAAAGCAAAG ATGTCACAGT TATTTTAAGC AGAGATACTT AGAGCCTGTT TGGCTCAGCT 241 TAAAAGCTGG TTTTTGACTT ATTTAACTGT TTGGCAATAC TCAAAATAGT TTTTTTTAAC 301 TTATTTAACT GTTTGACAAT ACTCAAAATG GTTTATTTTA AGTTAAAAAA AACTTATTTT 361 AAGCCCCAAC AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 130549 to 128630): Exon 1 129576 129454 ( 123 n); cDNA 184 299 ( 116 n); score: 0.744 PPA cDNA 368 385 MATCH C08HBa0165B06.1- SGN-E217478- 0.744 123 0.319 C PGS_C08HBa0165B06.1-_SGN-E217478- (129576 129454) Alignment (genomic DNA sequence = upper lines): AGCAAGTGAG TCAAAGATTA TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT 129517 ||||| | ||| || ||| ||| || | | | | | ||| | ||| || || AGCAAAGATG TCACAG-TTA TTTTAAG-CA G---AGAT-A -CTT-AGAGC CTGTTTGGCT 235 GA-CTTAAAA GCTGGTTTTT GACTTATTTA ACTGTTTGAC AATACTCAAA ATAGCTTATT 129458 | ||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||| || || CAGCTTAAAA GCTGGTTTTT GACTTATTTA ACTGTTTGGC AATACTCAAA ATAGTTTTTT 295 TTAA 129454 |||| TTAA 299 hqPGS_C08HBa0165B06.1-_SGN-E217478- (129576 129454) ******************************************************************************** EST sequence 69 -strand 397 n (File: SGN-E229134-) 1 TTCACTTTCA CTGTCCAACA AGATTCACTG AAAAAATGGT GCACGAGTTA GGAATGTCGT 61 CCCTGGTACA GAGGAAGAAG CACGTCGTGT GATTGAACGG ATGGATGCTG AAAATTCATG 121 AAGTCTTCTT GACTAGCATC AATTGGCAGA TAAAGGACTG AGGATACCTG ATTTTGGGTT 181 TCAAACTCCC AGAAAAGCAA AGATGTCACA GTTATTTTAA GCAGAGATAC TTAGAGCCTG 241 TTTGGCTCAG CTTAAAAGCT GGTTTTTGAC TTATTTAACT GTTTGGCAAT ACTCAAAATA 301 GTTTTTTTTA ACTTATTTAA CTGTTTGACA ATACTCAAAA TGGTTTATTT TAAGTTAAAA 361 AAAACTTATT TTAAGCCAAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 130549 to 128666): Exon 1 129576 129454 ( 123 n); cDNA 196 311 ( 116 n); score: 0.744 PPA cDNA 378 397 MATCH C08HBa0165B06.1- SGN-E229134- 0.744 123 0.310 C PGS_C08HBa0165B06.1-_SGN-E229134- (129576 129454) Alignment (genomic DNA sequence = upper lines): AGCAAGTGAG TCAAAGATTA TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT 129517 ||||| | ||| || ||| ||| || | | | | | ||| | ||| || || AGCAAAGATG TCACAG-TTA TTTTAAG-CA G---AGAT-A -CTT-AGAGC CTGTTTGGCT 247 GA-CTTAAAA GCTGGTTTTT GACTTATTTA ACTGTTTGAC AATACTCAAA ATAGCTTATT 129458 | ||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||| || || CAGCTTAAAA GCTGGTTTTT GACTTATTTA ACTGTTTGGC AATACTCAAA ATAGTTTTTT 307 TTAA 129454 |||| TTAA 311 hqPGS_C08HBa0165B06.1-_SGN-E229134- (129576 129454) ******************************************************************************** EST sequence 68 -strand 468 n (File: SGN-E228654-) 1 ATCAATGTAG AAGTGGTAGC TCATGTCATG AGACCTGAGT TGCGGTCTAG CGAGGTTTCA 61 AACAATTTCT ATTTCACTTT CACTGTCCAA CAAGATTCAC TGAAAAATGG TGCACGAGTT 121 AGGAATGTCG TCCCTGGTAC AGAGGAAGAA GCACGTCGTG TGATTGAACG GATGGATGCT 181 GAAAATTCAT GAAGTCTTCT TGACTAGCAT CAATTGGCAG ATAAAGGACT GAGGATACCT 241 GATTTTGGGT TTCAAACTCC CAGAAAAGCA AAGATGTCCC AGTTATTTTA AGCAGAGATA 301 CTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTTTTTGA CTTATTTAAC TGTTTGGCAA 361 TACTCAAAAT AGTTTTTTTT AACTTATTTA ACTGTTTGAC AATACTCAAA ATGGTTTATT 421 TTAAGTTAAA AAAAACTTAT TTTAAGCCCA AAAAAAAAAA AAAAAAAA Predicted gene structure (within gDNA segment 130549 to 128630): Exon 1 129529 129454 ( 76 n); cDNA 306 382 ( 77 n); score: 0.836 PPA cDNA 450 468 MATCH C08HBa0165B06.1- SGN-E228654- 0.836 76 0.162 C PGS_C08HBa0165B06.1-_SGN-E228654- (129529 129454) Alignment (genomic DNA sequence = upper lines): AGCTGGTCAA ACTGA-CTTA AAAGCTGGTT TTTGACTTAT TTAACTGTTT GACAATACTC 129471 ||| || || | |||| |||||||||| |||||||||| |||||||||| | |||||||| AGCCTGTTTG GCTCAGCTTA AAAGCTGGTT TTTGACTTAT TTAACTGTTT GGCAATACTC 365 AAAATAGCTT ATTTTAA 129454 ||||||| || |||||| AAAATAGTTT TTTTTAA 382 hqPGS_C08HBa0165B06.1-_SGN-E228654- (129529 129454) ******************************************************************************** EST sequence 367 +strand 430 n (File: SGN-E240526+) 1 ACAAGTCAAC TTTGTTTGAT TAGTAGGATT ATTTCGTTAC TTTGTATCGA GTAAATCTTA 61 ATTCATTGTA CTATACTGAA CTTGTAAAAC TATTGAACTG GTATTTTATC CTCCGTCTTG 121 GGCGTGGTGA AGCAAATGAT CAGTGAGATT GACCACCATC AGTATAGTCA GAGTGTGTAA 181 TTGTGGACAA GGCCATTGAC CCATGATGAC AGCCCACAAA ATAATGCAAT ATCAGACTAA 241 ATTGTTAGGA GTTGGCCCAG TTCTGGAGAA ACACATGCAG GATGATAGCA ATGGGACCAA 301 GAGGTAAAAA ACTTCTAGTT GGCTACAAAA ACAGAATTAA GAGCTTGTTT GGCTCAGCTT 361 AAAAGCTGGT CAAACTGACT TAAAAGCTGG TTTTTAACTT ATTTAACTGT TTGACAATAC 421 TTAAAATAGC Predicted gene structure (within gDNA segment 130549 to 128772): Exon 1 129576 129463 ( 114 n); cDNA 317 430 ( 114 n); score: 0.868 MATCH C08HBa0165B06.1- SGN-E240526+ 0.868 114 0.265 C PGS_C08HBa0165B06.1-_SGN-E240526+ (129576 129463) Alignment (genomic DNA sequence = upper lines): AGCAAGTGAG TCAAAGATTA TTTAGAGCCT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT 129517 || | | ||| | | || ||||| | |||||||||| |||||||||| |||||||||| AGTTGGCTAC AAAAACAGAA TTAAGAGCTT GTTTGGCTCA GCTTAAAAGC TGGTCAAACT 376 GACTTAAAAG CTGGTTTTTG ACTTATTTAA CTGTTTGACA ATACTCAAAA TAGC 129463 |||||||||| ||||||||| |||||||||| |||||||||| ||||| |||| |||| GACTTAAAAG CTGGTTTTTA ACTTATTTAA CTGTTTGACA ATACTTAAAA TAGC 430 hqPGS_C08HBa0165B06.1-_SGN-E240526+ (129576 129463) ******************************************************************************** EST sequence 67 -strand 514 n (File: SGN-E256217-) 1 CACATAAGCT TCTGAATTTC CAGATCCTAA GCTTCCAATA CTAATCCATG GAAAAATAAA 61 AAGAGAAAAA ATAAGAGCAA ATATTCAGAA AGATTATAGG TACCAAAACC ACATTTCGTC 121 AATAATTATT GCATGTTTTA TTAGATTATA AAACACTCTT AATTAGTTAA TTTAATATGA 181 AAATGGAATA GTATTTTAAT AAGGTAATAA CATTTTTGAT CCCTCAATTA TTAGTTCTTC 241 TAATTTTAGT CTTTATGATA TCTTCAATTA CTTGAAATGT ACACTTTGAA CTATCCCTTT 301 TCTTGTGAAT AATCAAATTC GCAAAATTAT TCATCATTTC GTCTTTTGAT TAACTATATG 361 TGCTATGTTA AAGCATGTAT TTTTATGTTG AACTTAAGGA TAATATACTA CTTCAAAAAA 421 AGCTCAAATA TATATAGCAC ATCTAAGCAG ACATTTTAAG AGCCTGTTTG GCTCAGCTTA 481 AAAGCTGGTC AAACTGACTT AAAAGCTGGT TTTT Predicted gene structure (within gDNA segment 130549 to 128898): Exon 1 130384 130325 ( 60 n); cDNA 379 437 ( 59 n); score: 0.583 Intron 1 130324 129577 ( 748 n); Pd: 0.140 (s: 0.58), Pa: 0.756 (s: 0.80) Exon 2 129576 129498 ( 79 n); cDNA 438 514 ( 77 n); score: 0.873 MATCH C08HBa0165B06.1- SGN-E256217- 0.748 139 0.270 C PGS_C08HBa0165B06.1-_SGN-E256217- (130384 130325,129576 129498) Alignment (genomic DNA sequence = upper lines): ATAATTTTTT TAAAAACTAT GATAAAACGC TAACTAAATA CATGATGAAA TAATAGAGAC 130325 || || | | | || | ||||| | | || | || | | | | ||| | ||| | | ATTTTTATGT TGAACTTAAG GATAATATAC TACTTCAAAA AAAGCTCAAA T-ATATATAG 437 GTACGTCAAA ACTTACTAGA ATAGCATCAT TATAAAGAAA GAAAAATGTA AATAGAAAAA 130265 .......... .......... .......... .......... .......... .......... 437 GTAGCACATA TTAATGACCA AAAAAGGTCT TGGTGAACAG AATGCATTAA TCTTGACTTA 130205 .......... .......... .......... .......... .......... .......... 437 ATAACGAGAA TAACTTTTTT TTCCCCACTC GATATTCGAA ATTCACCTTA AAACTTTGAC 130145 .......... .......... .......... .......... .......... .......... 437 TAAATTCAGA TCGTGCTCTG CGACCCATCC TCACGAAGAA AGTAAAATAA GAAAAAGAAA 130085 .......... .......... .......... .......... .......... .......... 437 CTTTTATAAG ACTCATTCAA TTCAACCTAT TTTTTTTTTC TTTTTTTCAT TTCATTGATC 130025 .......... .......... .......... .......... .......... .......... 437 TTTTAGGTAC CTATCTGTCT ATAAGGAGTG TCTGGTGTGT GTAGTGATGC TAATGGTGGC 129965 .......... .......... .......... .......... .......... .......... 437 TTGGTTGGTG AATAGAATAA ATGCTTCTGT TCTTGCAACA GACCCTACCA TATGATTCAT 129905 .......... .......... .......... .......... .......... .......... 437 ACTCACACTG TGGTGATAGT GAACCATGAC ATATAACAAA TTGGCTTCTC TTTTTGTTTG 129845 .......... .......... .......... .......... .......... .......... 437 TTATCCACAT AAAAATAAAA CAATTTAAGT ATATATACTA ATTACTTCTT TTCTATACTA 129785 .......... .......... .......... .......... .......... .......... 437 ACCATCAAAT TTATAATCAA AGAATTAGGT GAGTTAGTTT AAAATTGTTG TTGCATTCGT 129725 .......... .......... .......... .......... .......... .......... 437 ATCGTATCTT TTTAAGATGT AGTACTATTT TTAAAGAATC TGACATGTAT GTGTGTGTGC 129665 .......... .......... .......... .......... .......... .......... 437 TTTGTGTAAT TTTGTCTACG TACAATTTGT ATAATCTTGT TATATACTTT TAAAGGACTA 129605 .......... .......... .......... .......... .......... .......... 437 TACATATAAT ACATTGACAT TTTTGAAGAG CAAGTGAGTC AAAGATTATT TAGAGCCTGT 129545 || | || | | | ||| || ||||||||| .......... .......... ........CA CATCTAAG-C AGACATT-TT AAGAGCCTGT 467 TTGGCTCAGC TTAAAAGCTG GTCAAACTGA CTTAAAAGCT GGTTTTT 129498 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TTGGCTCAGC TTAAAAGCTG GTCAAACTGA CTTAAAAGCT GGTTTTT 514 hqPGS_C08HBa0165B06.1-_SGN-E256217- (129576 129498) Total number of EST alignments reported: 417 ________________________________________________________________________________ Predicted gene locations (26) in segment 1 to 130549: PGL 1 (+ strand): 158 1774 AGS-1 (158 343,855 1774) SCR (e 0.809 d 0.000 a 0.000,e 0.923) Exon 1 158 343 ( 186 n); score: 0.809 Intron 1 344 854 ( 511 n); Pd: 0.000 Pa: 0.000 Exon 2 855 1774 ( 920 n); score: 0.923 PGS (158 343,855 1376) SGN-E543260+ PGS (967 1774) SGN-E543261- PGS (1229 1773) SGN-E303894- 3-phase translation of AGS-1 (+strand): . . . . . . 158 AACATAATATTTGTTTTTATTGCAAACAACAATAATAACATACTCAATATAGTCTCATAA N I I F V F I A N N N N N I L N I V S - T - Y L F L L Q T T I I T Y S I - S H K H N I C F Y C K Q Q - - H T Q Y S L I . . . . . . 218 GTGTGGTCTGATGAGGGTGAGGGTGACAAGGCGGGGTGCAACGGAAGAAGAAGATACATT V W S D E G E G D K A G C N G R R R Y I C G L M R V R V T R R G A T E E E D T F S V V - - G - G - Q G G V Q R K K K I H . . . . . . 278 TACAATGATAAACTAATGTTAACATCTTCAAGATGGTTTTATTGCAAATGAAAAATCTTA Y N D K L M L T S S R W F Y C K - K I L T M I N - C - H L Q D G F I A N E K S - L Q - - T N V N I F K M V L L Q M K N L . : . . . . . 338 ATCAGT : GTGTCACTGAGATCAGCTCCTTCATTTGTTTTTTCAAAATAAATCGGAAAACCC I S : V S L R S A P S F V F S K - I G K P S V : C H - D Q L L H L F F Q N K S E N P N Q : C V T E I S S F I C F F K I N R K T . . . . . . 909 AACAGCAATGGGGCTCCGAACTACATAATTTTCAGAAATCCATCTGAGAGATCCCTGAGT N S N G A P N Y I I F R N P S E R S L S T A M G L R T T - F S E I H L R D P - V Q Q Q W G S E L H N F Q K S I - E I P E . . . . . . 969 ATATATGGTACTTGGTCTAGAAAAAGGTGTAAATGTTACTTGATAGCTCAATTTTTGTTT I Y G T W S R K R C K C Y L I A Q F L F Y M V L G L E K G V N V T - - L N F C F Y I W Y L V - K K V - M L L D S S I F V . . . . . . 1029 TACCTTTGAAAAAACAAGTGTAGTTGGTTCAACTTTCACATCAAGGCCTCGCGGTGAATC Y L - K N K C S W F N F H I K A S R - I T F E K T S V V G S T F T S R P R G E S L P L K K Q V - L V Q L S H Q G L A V N . . . . . . 1089 AATATCAACTCGGTATGTTGAGTTGGCTGTTCCTACATTTGTCACAGTTCTTGAATAAAC N I N S V C - V G C S Y I C H S S - I N I S T R Y V E L A V P T F V T V L E - T Q Y Q L G M L S W L F L H L S Q F L N K . . . . . . 1149 TTGAGCTTCTGAGTTGTTTCTGACTTGAATTGCGAATGATGGGTAATTTAGTTGACCTTC L S F - V V S D L N C E - W V I - L T F - A S E L F L T - I A N D G - F S - P S L E L L S C F - L E L R M M G N L V D L . . . . . . 1209 TAAGATGCTCGTAATCTCTGAACAATTAACTTTGCGCTGCACAATGACAGTAACTTGTCT - D A R N L - T I N F A L H N D S N L S K M L V I S E Q L T L R C T M T V T C L L R C S - S L N N - L C A A Q - Q - L V . . . . . . 1269 GTTTGTGTAATTCAAACCACATAAATAAGGTATGTAATCAGATGGCTCAATATCATATAC V C V I Q T T - I R Y V I R W L N I I Y F V - F K P H K - G M - S D G S I S Y T C L C N S N H I N K V C N Q M A Q Y H I . . . . . . 1329 CAGGCCAGGATCATTTGCTTTTGATGGATTAACGTGGCCTGCACCTGTGGCAAAGACATC Q A R I I C F - W I N V A C T C G K D I R P G S F A F D G L T W P A P V A K T S P G Q D H L L L M D - R G L H L W Q R H . . . . . . 1389 GGCTGGAAGGTATGTTTCATCCTCGATTAATTTGGATCCGAGGTTAAAGACATCAGCTGT G W K V C F I L D - F G S E V K D I S C A G R Y V S S S I N L D P R L K T S A V R L E G M F H P R L I W I R G - R H Q L . . . . . . 1449 TGTCATAATTGCCGACTTAATTGCAGCTGGAGACCAATCGGGGTGAACACTTTTAAGTAG C H N C R L N C S W R P I G V N T F K - V I I A D L I A A G D Q S G - T L L S S L S - L P T - L Q L E T N R G E H F - V . . . . . . 1509 TGCTGCAACGCCACTGAGGTGAGGACAAGACATTGATGTGCCTGCAATCATGTTGAATGT C C N A T E V R T R H - C A C N H V E C A A T P L R - G Q D I D V P A I M L N V V L Q R H - G E D K T L M C L Q S C - M . . . . . . 1569 CGAGTTGGTATTTGTGTTGTTCTCCAAGGAAATAGGCCAAGCTGCTAAAATATTTACACC R V G I C V V L Q G N R P S C - N I Y T E L V F V L F S K E I G Q A A K I F T P S S W Y L C C S P R K - A K L L K Y L H . . . . . . 1629 AGGACCAATAATATCCGGTTTCAGAATTCTAGGACTTGCATAACTTGGACCCTGGAAGAA R T N N I R F Q N S R T C I T W T L E E G P I I S G F R I L G L A - L G P W K K Q D Q - Y P V S E F - D L H N L D P G R . . . . . . 1689 AATCCAGCAACTACTGGAGCACGATTATCTCCTATTTAGTTCCCTTGAACGCGATTGTTG N P A T T G A R L S P I - F P - T R L L I Q Q L L E H D Y L L F S S L E R D C C K S S N Y W S T I I S Y L V P L N A I V . . . 1749 CAGTGGGGGTTGTTGTTGAGTTTATG Q W G L L L S L S G G C C - V Y A V G V V V E F M Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (391 702) SCR (e 0.886) Exon 1 391 702 ( 312 n); score: 0.886 PGS (391 702) SGN-E540411+ PGS (391 683) SGN-E540411- PGS (391 676) SGN-E540167+ 3-phase translation of AGS-2 (+strand): . . . . . . 391 GGATAATGCCCAAGTACCTCCTCAACCTATGTCCGAAATCTCACAGACACACTTATACTA G - C P S T S S T Y V R N L T D T L I L D N A Q V P P Q P M S E I S Q T H L Y Y I M P K Y L L N L C P K S H R H T Y T . . . . . . 451 TACTAAGGTCCTATTCCCCCCTGAACTTATTTTATTAGTAACTTTTTACCCCTTTTTAGC Y - G P I P P - T Y F I S N F L P L F S T K V L F P P E L I L L V T F Y P F L A I L R S Y S P L N L F Y - - L F T P F - . . . . . . 511 TTACGTGGCACTATCTTGTGGGCTCAACGATGATTGACTTTTTTTTTCAAACTAGTGCCA L R G T I L W A Q R - L T F F F K L V P Y V A L S C G L N D D - L F F S N - C H L T W H Y L V G S T M I D F F F Q T S A . . . . . . 571 CGTAGGCTAAAAAGGGTAGAAAATTACATATAAAATAAGTTCAGGGGTAATAGGACCTTA R R L K R V E N Y I - N K F R G N R T L V G - K G - K I T Y K I S S G V I G P Y T - A K K G R K L H I K - V Q G - - D L . . . . . . 631 CTATAGTATAAGTGTGTCTCTGGAATTTCGGGCATAGGTTGAGGGGGTACTTGAGTATTT L - Y K C V S G I S G I G - G G T - V F Y S I S V S L E F R A - V E G V L E Y F T I V - V C L W N F G H R L R G Y L S I . . 691 TCCCCACTAAAT S P L N P H - F P T K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 702 ATTTAGTGGGGAAAATACTCAAGTACCCCCTCAACCTATGCCCGAAATTCCAGAGACACA I - W G K Y S S T P S T Y A R N S R D T F S G E N T Q V P P Q P M P E I P E T H L V G K I L K Y P L N L C P K F Q R H . . . . . . 642 CTTATACTATAGTAAGGTCCTATTACCCCTGAACTTATTTTATATGTAATTTTCTACCCT L I L - - G P I T P E L I L Y V I F Y P L Y Y S K V L L P L N L F Y M - F S T L T Y T I V R S Y Y P - T Y F I C N F L P . . . . . . 582 TTTTAGCCTACGTGGCACTAGTTTGAAAAAAAAAGTCAATCATCGTTGAGCCCACAAGAT F - P T W H - F E K K S Q S S L S P Q D F S L R G T S L K K K V N H R - A H K I F L A Y V A L V - K K K S I I V E P T R . . . . . . 522 AGTGCCACGTAAGCTAAAAAGGGGTAAAAAGTTACTAATAAAATAAGTTCAGGGGGGAAT S A T - A K K G - K V T N K I S S G G N V P R K L K R G K K L L I K - V Q G G I - C H V S - K G V K S Y - - N K F R G E . . . . . . 462 AGGACCTTAGTATAGTATAAGTGTGTCTGTGAGATTTCGGACATAGGTTGAGGAGGTACT R T L V - Y K C V C E I S D I G - G G T G P - Y S I S V S V R F R T - V E E V L - D L S I V - V C L - D F G H R L R R Y . . 402 TGGGCATTATCC W A L S G H Y L G I I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (+ strand): 5542 5740 AGS-1 (5542 5740) SCR (e 0.940) Exon 1 5542 5740 ( 199 n); score: 0.940 PGS (5542 5740) SGN-E301078- PGS (5542 5740) SGN-E301194- 3-phase translation of AGS-1 (+strand): . . . . . . 5542 ATTGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGACAACAG I V V R N L R - Y E K I - T R K T R Q Q L L C G I - D N T R K Y K R E K Q D N R C C A E F E I I R E N I N A K N K T T . . . . . . 5602 ATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAACAGTTTTATT I Y V V H Q - I G Y V H G K R G N S F I F T W F T N K L A T S T G R E G T V L L D L R G S P I N W L R P R E E R E Q F Y . . . . . . 5662 ATGGAGAGGCAAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTGC M E R Q K T E L Q N R V S H S V Y I - C W R G K K Q N Y R I G F P I A S I Y S A Y G E A K N R I T E - G F P - R L Y I V . . 5722 TAAGCTACGCCCTAACAGG - A T P - Q K L R P N R L S Y A L T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 5740 CCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATT P V R A - L S T I Y R R Y G K P Y S V I L L G R S L A L Y I D A M G N P I L - F C - G V A - H Y I - T L W E T L F C N . . . . . . 5680 CTGTTTTTTGCCTCTCCATAATAAAACTGTTCCCTCTCTTCCCGTGGACGTAGCCAATTT L F F A S P - - N C S L S S R G R S Q F C F L P L H N K T V P S L P V D V A N L S V F C L S I I K L F P L F P W T - P I . . . . . . 5620 ATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATC I G E P R K S V V L F F A F I F S R I I L V N H V N L L S C F S R L Y F L V L S Y W - T T - I C C L V F R V Y I F S Y Y . . 5560 TCAAATTCCGCACAACAAT S N S A Q Q Q I P H N N L K F R T T Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (+ strand): 6215 7482 AGS-1 (6215 6246,6367 7482) SCR (e 0.375 d 0.753 a 0.000,e 0.999) Exon 1 6215 6246 ( 32 n); score: 0.375 Intron 1 6247 6366 ( 120 n); Pd: 0.753 Pa: 0.000 Exon 2 6367 7482 (1116 n); score: 0.999 PGS (6215 6246,6367 7082) SGN-E543260+ PGS (6673 7482) SGN-E543261- PGS (6935 7481) SGN-E303894- 3-phase translation of AGS-1 (+strand): . . . . : . . 6215 GGGAAAAAGAAGTGTTGAAATCTCGATATCTG : ATAAACATAATATTTGTTTTTATTGCAA G K K K C - N L D I - : - T - Y L F L L Q G K R S V E I S I S : D K H N I C F Y C K E K E V L K S R Y L : I N I I F V F I A . . . . . . 6395 ACAACAAAAATAACATACTCAGTGTAGTTTTACAAGTGTGGTCTGTGGAGGGTGAGGCTG T T K I T Y S V - F Y K C G L W R V R L Q Q K - H T Q C S F T S V V C G G - G - N N K N N I L S V V L Q V W S V E G E A . . . . . . 6455 ACAAGGTGGGGTGGAACATATGAACACAAGAGTAAACATATGGGATAATAAACCAATGTT T R W G G T Y E H K S K H M G - - T N V Q G G V E H M N T R V N I W D N K P M L D K V G W N I - T Q E - T Y G I I N Q C . . . . . . 6515 AACATCTTTAAGATGGTTTTATTGCAAATGAAAAATCTTGATCAGTATGTCACTGAGATC N I F K M V L L Q M K N L D Q Y V T E I T S L R W F Y C K - K I L I S M S L R S - H L - D G F I A N E K S - S V C H - D . . . . . . 6575 AGCTCCTTCATTTGTTTCTTCACAAATAATCAGAAAACCAAGCAGCAATTTGGCTCCTAA S S F I C F F T N N Q K T K Q Q F G S - A P S F V S S Q I I R K P S S N L A P N Q L L H L F L H K - S E N Q A A I W L L . . . . . . 6635 CAATGTGGTTTTCAGAAATCCATCTAAGAGATCCCTGAGTATATGTAGTACTTGGTGCAG Q C G F Q K S I - E I P E Y M - Y L V Q N V V F R N P S K R S L S I C S T W C S T M W F S E I H L R D P - V Y V V L G A . . . . . . 6695 CAAAAGGTGTAAATGTTACTTGATAGCTCAATTTTTGTTTCACATCTGAAAAAACAAGTG Q K V - M L L D S S I F V S H L K K Q V K R C K C Y L I A Q F L F H I - K N K C A K G V N V T - - L N F C F T S E K T S . . . . . . 6755 TAGTTGGTTCAACTTTCACATCAAGGCCTTGCGGTGAATCAATATCAACTCGGTATGTCG - L V Q L S H Q G L A V N Q Y Q L G M S S W F N F H I K A L R - I N I N S V C R V V G S T F T S R P C G E S I S T R Y V . . . . . . 6815 AGTTGGCTTGTCCTACATTTGTCACAGTTCTTGAATATACTTGAACTCCTGAGTTGCTTT S W L V L H L S Q F L N I L E L L S C F V G L S Y I C H S S - I Y L N S - V A F E L A C P T F V T V L E Y T - T P E L L . . . . . . 6875 TAACTTGAATTGCAAACGATGGATAATTTAGTTGACCTTCTAAGATACTCGTAACCTCTG - L E L Q T M D N L V D L L R Y S - P L N L N C K R W I I - L T F - D T R N L - L T - I A N D G - F S - P S K I L V T S . . . . . . 6935 AACAATTAACTTTGCGCTGCAGAATGACTGCAATTTGTCTGTTTGTGTAATTCAAACCAC N N - L C A A E - L Q F V C L C N S N H T I N F A L Q N D C N L S V C V I Q T T E Q L T L R C R M T A I C L F V - F K P . . . . . . 6995 ATAAATAAGGTAAGTAATCAGATGGCTTGATATCATATATCAGGCCGGGGGCATTTGCTT I N K V S N Q M A - Y H I S G R G H L L - I R - V I R W L D I I Y Q A G G I C F H K - G K - S D G L I S Y I R P G A F A . . . . . . 7055 TTGATGGATTAACATGACCGGCACCTGTGGCAAAGACATCGGCTGGAAGGTAAGTTTCGT L M D - H D R H L W Q R H R L E G K F R - W I N M T G T C G K D I G W K V S F V F D G L T - P A P V A K T S A G R - V S . . . . . . 7115 CCTCGATTAAGTTGGATCCGAGGTTTAAGACATCGGCTGTTGTCATAATAGCTGACTTAA P R L S W I R G L R H R L L S - - L T - L D - V G S E V - D I G C C H N S - L N S S I K L D P R F K T S A V V I I A D L . . . . . . 7175 TTGCAGCTGGAGACCAATCGGGGTGAACACTTTTTAGTAGTGCTGCAACGCCACTGAGGT L Q L E T N R G E H F L V V L Q R H - G C S W R P I G V N T F - - C C N A T E V I A A G D Q S G - T L F S S A A T P L R . . . . . . 7235 GAGGACAAGACATTGAGGTGCCTGAGATCATGTTGAATGTCGAGTTGGTATTTGTGTTGT E D K T L R C L R S C - M S S W Y L C C R T R H - G A - D H V E C R V G I C V V - G Q D I E V P E I M L N V E L V F V L . . . . . . 7295 TCTCCAAGGAAACAGGCCAAGCTGCTAAAATGTTAACACCAGGACCAATAATGTCCGGTT S P R K Q A K L L K C - H Q D Q - C P V L Q G N R P S C - N V N T R T N N V R F F S K E T G Q A A K M L T P G P I M S G . . . . . . 7355 TCAGAATTCTAGGACTTACATAACTTGGACCCCTGGAAGAAAATCCAGCAACCACTGGAG S E F - D L H N L D P W K K I Q Q P L E Q N S R T Y I T W T P G R K S S N H W S F R I L G L T - L G P L E E N P A T T G . . . . . . 7415 CACGATTATCTCCGATTGTAGTTCCCTTGAATGCGATTGTTGCAGTGGGGGTTGTTGTTG H D Y L R L - F P - M R L L Q W G L L L T I I S D C S S L E C D C C S G G C C - A R L S P I V V P L N A I V A V G V V V . 7475 AGTTTATG S L V Y E F M Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-3_AGS-1_PPS_1 (6546 6743) (frame '2'; 195 bp, 65 residues) 1 KILISMSLRS APSFVSSQII RKPSSNLAPN NVVFRNPSKR SLSICSTWCS KRCKCYLIAQ 61 FLFHI- PGL 4 (- strand): 11379 10596 AGS-1 (11379 10596) SCR (e 0.865) Exon 1 11379 10596 ( 784 n); score: 0.865 PGS (11379 10596) SGN-E543261+ PGS (11378 10832) SGN-E303894+ 3-phase translation of AGS-1 (-strand): . . . . . . 11379 CATAGACTCAACACCAACCCCAACAGCCACAATAGTGTTCAAGGGAACTATAATCAGAGA H R L N T N P N S H N S V Q G N Y N Q R I D S T P T P T A T I V F K G T I I R D - T Q H Q P Q Q P Q - C S R E L - S E . . . . . . 11319 TGATCGTGCTCCAGTGGTTGCTTCATTGTCTTCCAGAGGTCCTAGTTATGCAAAGCCCTG - S C S S G C F I V F Q R S - L C K A L D R A P V V A S L S S R G P S Y A K P W M I V L Q W L L H C L P E V L V M Q S P . . . . . . 11259 GAATTCTAAAATCAGACATTATTGGTCCTGGCGTTAACATTCTAGCAGCTTGGCATATTT E F - N Q T L L V L A L T F - Q L G I F N S K I R H Y W S W R - H S S S L A Y F G I L K S D I I G P G V N I L A A W H I . . . . . . 11199 CCTTGGAGAACAATACAAACACCAACTCGAGATTCAACATGATCTCAGGCACCTCAATGT P W R T I Q T P T R D S T - S Q A P Q C L G E Q Y K H Q L E I Q H D L R H L N V S L E N N T N T N S R F N M I S G T S M . . . . . . 11139 CTTGTCCTCACCTCAGTGGCGTTGCAGCACTACTAAAAAGTGTTCACCCCGATTGGTCTC L V L T S V A L Q H Y - K V F T P I G L L S S P Q W R C S T T K K C S P R L V S S C P H L S G V A A L L K S V H P D W S . . . . . . 11079 CAGCTGCAATTAAGTCTGTAATTATGACAACAGCCAATGTCTTCAACCTCGGATCTAACT Q L Q L S L - L - Q Q P M S S T S D L T S C N - V C N Y D N S Q C L Q P R I - L P A A I K S V I M T T A N V F N L G S N . . . . . . 11019 TAATCGAGGATGAAACATACCTTCCGGCCAATGTTTTCGCCACTGGTGCAGGCCATGTTA - S R M K H T F R P M F S P L V Q A M L N R G - N I P S G Q C F R H W C R P C - L I E D E T Y L P A N V F A T G A G H V . . . . . . 10959 ATCCGTCAAAAGCAAATGATCTAGGTCTGATATATGACGTAGACCAACCGTTTACTTACC I R Q K Q M I - V - Y M T - T N R L L T S V K S K - S R S D I - R R P T V Y L P N P S K A N D L G L I Y D V D Q P F T Y . . . . . . 10899 TTATTTATGTGGTCTAAATTACATAGACACAGAAGTTGGATTCTTTTTTCCGGGAAAAGT L F M W S K L H R H R S W I L F S G K S Y L C G L N Y I D T E V G F F F P G K V L I Y V V - I T - T Q K L D S F F R E K . . . . . . 10839 TAATTGTTCAGAGGTTACTAGCATCTCAGATGGTCAACTAAATTATCCATCGTTTTCGAT - L F R G Y - H L R W S T K L S I V F D N C S E V T S I S D G Q L N Y P S F S I L I V Q R L L A S Q M V N - I I H R F R . . . . . . 10779 CCAAGTCAGAGTCAACTCAGCAGCTCAAGTATATTCAAGAACTGTGATGAATGTTGGACA P S Q S Q L S S S S I F K N C D E C W T Q V R V N S A A Q V Y S R T V M N V G Q S K S E S T Q Q L K Y I Q E L - - M L D . . . . . . 10719 AACCAACTCAACATACAGAGTTGAAATTGGTTCACCGCCGAATCTTGATGTGAAAGTTGA N Q L N I Q S - N W F T A E S - C E S - T N S T Y R V E I G S P P N L D V K V E K P T Q H T E L K L V H R R I L M - K L . . . . . . 10659 ACCAACTACACTTGTTTTTTCAGAGGTGAAACAAGCATTGAGCTATCAAGTGACATTTAC T N Y T C F F R G E T S I E L S S D I Y P T T L V F S E V K Q A L S Y Q V T F T N Q L H L F F Q R - N K H - A I K - H L . 10599 ACCT T P H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-4_AGS-1_PPS_1 (11326 10883) (frame '0'; 441 bp, 147 residues) 1 SEMIVLQWLL HCLPEVLVMQ SPGILKSDII GPGVNILAAW HISLENNTNT NSRFNMISGT 61 SMSCPHLSGV AALLKSVHPD WSPAAIKSVI MTTANVFNLG SNLIEDETYL PANVFATGAG 121 HVNPSKANDL GLIYDVDQPF TYLIYVV- 3-phase translation of AGS-1 (+strand): . . . . . . 10596 AGGTGTAAATGTCACTTGATAGCTCAATGCTTGTTTCACCTCTGAAAAAACAAGTGTAGT R C K C H L I A Q C L F H L - K N K C S G V N V T - - L N A C F T S E K T S V V V - M S L D S S M L V S P L K K Q V - . . . . . . 10656 TGGTTCAACTTTCACATCAAGATTCGGCGGTGAACCAATTTCAACTCTGTATGTTGAGTT W F N F H I K I R R - T N F N S V C - V G S T F T S R F G G E P I S T L Y V E L L V Q L S H Q D S A V N Q F Q L C M L S . . . . . . 10716 GGTTTGTCCAACATTCATCACAGTTCTTGAATATACTTGAGCTGCTGAGTTGACTCTGAC G L S N I H H S S - I Y L S C - V D S D V C P T F I T V L E Y T - A A E L T L T W F V Q H S S Q F L N I L E L L S - L - . . . . . . 10776 TTGGATCGAAAACGATGGATAATTTAGTTGACCATCTGAGATGCTAGTAACCTCTGAACA L D R K R W I I - L T I - D A S N L - T W I E N D G - F S - P S E M L V T S E Q L G S K T M D N L V D H L R C - - P L N . . . . . . 10836 ATTAACTTTTCCCGGAAAAAAGAATCCAACTTCTGTGTCTATGTAATTTAGACCACATAA I N F S R K K E S N F C V Y V I - T T - L T F P G K K N P T S V S M - F R P H K N - L F P E K R I Q L L C L C N L D H I . . . . . . 10896 ATAAGGTAAGTAAACGGTTGGTCTACGTCATATATCAGACCTAGATCATTTGCTTTTGAC I R - V N G W S T S Y I R P R S F A F D - G K - T V G L R H I S D L D H L L L T N K V S K R L V Y V I Y Q T - I I C F - . . . . . . 10956 GGATTAACATGGCCTGCACCAGTGGCGAAAACATTGGCCGGAAGGTATGTTTCATCCTCG G L T W P A P V A K T L A G R Y V S S S D - H G L H Q W R K H W P E G M F H P R R I N M A C T S G E N I G R K V C F I L . . . . . . 11016 ATTAAGTTAGATCCGAGGTTGAAGACATTGGCTGTTGTCATAATTACAGACTTAATTGCA I K L D P R L K T L A V V I I T D L I A L S - I R G - R H W L L S - L Q T - L Q D - V R S E V E D I G C C H N Y R L N C . . . . . . 11076 GCTGGAGACCAATCGGGGTGAACACTTTTTAGTAGTGCTGCAACGCCACTGAGGTGAGGA A G D Q S G - T L F S S A A T P L R - G L E T N R G E H F L V V L Q R H - G E D S W R P I G V N T F - - C C N A T E V R . . . . . . 11136 CAAGACATTGAGGTGCCTGAGATCATGTTGAATCTCGAGTTGGTGTTTGTATTGTTCTCC Q D I E V P E I M L N L E L V F V L F S K T L R C L R S C - I S S W C L Y C S P T R H - G A - D H V E S R V G V C I V L . . . . . . 11196 AAGGAAATATGCCAAGCTGCTAGAATGTTAACGCCAGGACCAATAATGTCTGATTTTAGA K E I C Q A A R M L T P G P I M S D F R R K Y A K L L E C - R Q D Q - C L I L E Q G N M P S C - N V N A R T N N V - F - . . . . . . 11256 ATTCCAGGGCTTTGCATAACTAGGACCTCTGGAAGACAATGAAGCAACCACTGGAGCACG I P G L C I T R T S G R Q - S N H W S T F Q G F A - L G P L E D N E A T T G A R N S R A L H N - D L W K T M K Q P L E H . . . . . . 11316 ATCATCTCTGATTATAGTTCCCTTGAACACTATTGTGGCTGTTGGGGTTGGTGTTGAGTC I I S D Y S S L E H Y C G C W G W C - V S S L I I V P L N T I V A V G V G V E S D H L - L - F P - T L L W L L G L V L S . 11376 TATG Y M L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 5 (- strand): 16049 12742 AGS-1 (16049 15124,14858 14450,13469 13430,12766 12742) SCR (e 0.781 d 0.000 a 0.000,e 0.937 d 0.000 a 0.900,e 0.512 d 0.000 a 0.000,e 0.720) Exon 1 16049 15124 ( 926 n); score: 0.781 Intron 1 15123 14859 ( 265 n); Pd: 0.000 Pa: 0.000 Exon 2 14858 14450 ( 409 n); score: 0.937 Intron 2 14449 13470 ( 980 n); Pd: 0.000 Pa: 0.900 Exon 3 13469 13430 ( 40 n); score: 0.512 Intron 3 13429 12767 ( 663 n); Pd: 0.000 Pa: 0.000 Exon 4 12766 12742 ( 25 n); score: 0.720 PGS (14571 14450,13469 13430,12766 12742) SGN-E376168- PGS (15398 15124,14858 14437) SGN-E548357- PGS (14847 14450) SGN-E307529+ PGS (15931 15164) SGN-E540271+ PGS (15488 15166) SGN-E200689+ PGS (15662 15176) SGN-E282432+ PGS (15684 15194) SGN-E210009+ PGS (15743 15241) SGN-E301429+ PGS (15931 15280) SGN-E335107+ PGS (15842 15294) SGN-E208913+ PGS (15942 15368) SGN-E244401+ PGS (15942 15386) SGN-E244422+ PGS (15842 15415) SGN-E208810+ PGS (16049 15590) SGN-E202140+ 3-phase translation of AGS-1 (-strand): . . . . . . 16049 TTTGTGGAAGGTGCTAATGTATATGGCAATGCTAATGGCACTGCTGTTGGTGTTGCCCCT F V E G A N V Y G N A N G T A V G V A P L W K V L M Y M A M L M A L L L V L P L C G R C - C I W Q C - W H C C W C C P . . . . . . 15989 CTTGCCCACATAGCCATATATAAGGTGTGTAATTCTAATAGTTGTTCTGACAGTGATATT L A H I A I Y K V C N S N S C S D S D I L P T - P Y I R C V I L I V V L T V I F S C P H S H I - G V - F - - L F - Q - Y . . . . . . 15929 TTAGCTGCCATGGATTCAGCTATAGATGATGGAGTAGATATTCTTTCAATGTCCCTTGGT L A A M D S A I D D G V D I L S M S L G - L P W I Q L - M M E - I F F Q C P L V F S C H G F S Y R - W S R Y S F N V P W . . . . . . 15869 GGAAGTCCAGTTCCTTTCTATGAAGACAGTATTGCTTTCGGGGCCTATGCTGCAACAGAA G S P V P F Y E D S I A F G A Y A A T E E V Q F L S M K T V L L S G P M L Q Q K W K S S S F L - R Q Y C F R G L C C N R . . . . . . 15809 AGAGGGATTCTTGTGAGTTGCTCTGCTGGAAATAGTGGTCCATCCTACATCACAGCATCA R G I L V S C S A G N S G P S Y I T A S E G F L - V A L L E I V V H P T S Q H Q K R D S C E L L C W K - W S I L H H S I . . . . . . 15749 AACACAGCCCCTTGGATTCTTACGGTAGGAGCCAGCACTATTGATAGAAAGATAAAAGCC N T A P W I L T V G A S T I D R K I K A T Q P L G F L R - E P A L L I E R - K P K H S P L D S Y G R S Q H Y - - K D K S . . . . . . 15689 ACTGTTACACTTGGAAATACAGAGGAATTTGAAGGGGAATCTGCTTATCGTCCACAGATT T V T L G N T E E F E G E S A Y R P Q I L L H L E I Q R N L K G N L L I V H R F H C Y T W K Y R G I - R G I C L S S T D . . . . . . 15629 TCCGACTCTACATACTTCACTCTATATGATGCTGCAAAAAGTATAGGTGATCCATCTGAA S D S T Y F T L Y D A A K S I G D P S E P T L H T S L Y M M L Q K V - V I H L K F R L Y I L H S I - C C K K Y R - S I - . . . . . . 15569 ACCCCTTATTGCAAACCAGGGTCACTCACTGACCCTGCAATAAAAGGAAAGATAGCCATA T P Y C K P G S L T D P A I K G K I A I P L I A N Q G H S L T L Q - K E R - P Y N P L L Q T R V T H - P C N K R K D S H . . . . . . 15509 TGTCAGGCAGGTGTCGTTTCAAATATTGAAAAAGGACAAGCTGTGAAGGATGCTGGAGGT C Q A G V V S N I E K G Q A V K D A G G V R Q V S F Q I L K K D K L - R M L E V M S G R C R F K Y - K R T S C E G C W R . . . . . . 15449 GTTGGCATGATTGTCATCAACCCATCACAATATGGTGTCACTAAATCAGCTGATGCTCAT V G M I V I N P S Q Y G V T K S A D A H L A - L S S T H H N M V S L N Q L M L M C W H D C H Q P I T I W C H - I S - C S . . . . . . 15389 GTTCTTCCAGCATTGGTTGTTTCAGCTGCAGATGGAAGCAAAATTCTTGATTATACCAAC V L P A L V V S A A D G S K I L D Y T N F F Q H W L F Q L Q M E A K F L I I P T C S S S I G C F S C R W K Q N S - L Y Q . . . . . . 15329 TCAATATCGAACCCTATTGCTACAATCACAATCCAAGGAACAGTAATTGGAGATAAAAAT S I S N P I A T I T I Q G T V I G D K N Q Y R T L L L Q S Q S K E Q - L E I K M L N I E P Y C Y N H N P R N S N W R - K . . . . . . 15269 GCTCCCATAGTTGCTGCATTTTCTTCTCGCGGACCAAGTAAACCTAATCCTGGGATCTTG A P I V A A F S S R G P S K P N P G I L L P - L L H F L L A D Q V N L I L G S - C S H S C C I F F S R T K - T - S W D L . . . . . . 15209 AAACCTGACATAATTGGTCCTGGTGTTAATATCCTCGCTGCTTGGCCTACTTCTGTGGAT K P D I I G P G V N I L A A W P T S V D N L T - L V L V L I S S L L G L L L W M E T - H N W S W C - Y P R C L A Y F C G . . . : . . . 15149 GACAACAAGGACACCAAATCCACATT : CCGTATTTATGTGGTTTGGGATACACAAATGCAC D N K D T K S T F : R I Y V V W D T Q M H T T R T P N P H : S V F M W F G I H K C T - Q Q G H Q I H I : P Y L C G L G Y T N A . . . . . . 14824 AGGTAAGTAGCCTGTTACGACGCACAGTGAATTGCTTGGAAGTGAATAGTATCCCTGAAG R - V A C Y D A Q - I A W K - I V S L K G K - P V T T H S E L L G S E - Y P - S Q V S S L L R R T V N C L E V N S I P E . . . . . . 14764 CACAATTAAACTATCCTTCTTTTTCCATATATGGACTTGGATCAACTCCTCAGACATATA H N - T I L L F P Y M D L D Q L L R H I T I K L S F F F H I W T W I N S S D I Y A Q L N Y P S F S I Y G L G S T P Q T Y . . . . . . 14704 CAAGAACTGTGACCAACGTTGGTGATGCTACATCATCTTACAAAGTGAAGATAGCTTCAC Q E L - P T L V M L H H L T K - R - L H K N C D Q R W - C Y I I L Q S E D S F T T R T V T N V G D A T S S Y K V K I A S . . . . . . 14644 TTATAGGAGTTGCCGTAGAAGTTGTACCCACAGAGCTAAATTTCTCCGAGTTGAACCAGA L - E L P - K L Y P Q S - I S P S - T R Y R S C R R S C T H R A K F L R V E P E L I G V A V E V V P T E L N F S E L N Q . . . . . . 14584 AGTTAACATACCAAGTGACATTTTCCAAGACAACCAGCAGTTCAGAAGTTGTGGTTGTTG S - H T K - H F P R Q P A V Q K L W L L V N I P S D I F Q D N Q Q F R S C G C - K L T Y Q V T F S K T T S S S E V V V V . . . . . . 14524 AGGGATTCTTGAAATGGACTTCTACTAGGCACTCTGTGAGAAGTCCTATTGCAGTTGTGT R D S - N G L L L G T L - E V L L Q L C G I L E M D F Y - A L C E K S Y C S C V E G F L K W T S T R H S V R S P I A V V . . : . . . . : 14464 TGGTCTAGTGAAAAA : CGGTGGTAATTTTGATCCAAAAATATGACAGAGCGTATAA : TTACC W S S E K : R W - F - S K N M T E R I : I T G L V K N : G G N F D P K I - Q S V - : L P L V - - K : T V V I L I Q K Y D R A Y N : Y . . 12761 AAATAACAGCTCTTTCACTT K - Q L F H N N S S F T Q I T A L S L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-5_AGS-1_PPS_1 (16049 15124,14858 14819) (frame '1'; 963 bp, 321 residues) 1 FVEGANVYGN ANGTAVGVAP LAHIAIYKVC NSNSCSDSDI LAAMDSAIDD GVDILSMSLG 61 GSPVPFYEDS IAFGAYAATE RGILVSCSAG NSGPSYITAS NTAPWILTVG ASTIDRKIKA 121 TVTLGNTEEF EGESAYRPQI SDSTYFTLYD AAKSIGDPSE TPYCKPGSLT DPAIKGKIAI 181 CQAGVVSNIE KGQAVKDAGG VGMIVINPSQ YGVTKSADAH VLPALVVSAA DGSKILDYTN 241 SISNPIATIT IQGTVIGDKN APIVAAFSSR GPSKPNPGIL KPDIIGPGVN ILAAWPTSVD 301 DNKDTKSTFR IYVVWDTQMH R- AGS-2 (15713 14487) SCR (e 0.917) Exon 1 15713 14487 (1227 n); score: 0.917 PGS (15060 14487) SGN-E207413+ PGS (15034 14591) SGN-E287935- PGS (15404 14697) SGN-E213673+ PGS (15350 14717) SGN-E213088+ PGS (15488 14821) SGN-E212584+ PGS (15539 14935) SGN-E308535+ PGS (15662 15003) SGN-E397025+ PGS (15713 15097) SGN-E306389+ 3-phase translation of AGS-2 (-strand): . . . . . . 15713 ACTATTGATAGAAAGATAAAAGCCACTGTTACACTTGGAAATACAGAGGAATTTGAAGGG T I D R K I K A T V T L G N T E E F E G L L I E R - K P L L H L E I Q R N L K G Y - - K D K S H C Y T W K Y R G I - R . . . . . . 15653 GAATCTGCTTATCGTCCACAGATTTCCGACTCTACATACTTCACTCTATATGATGCTGCA E S A Y R P Q I S D S T Y F T L Y D A A N L L I V H R F P T L H T S L Y M M L Q G I C L S S T D F R L Y I L H S I - C C . . . . . . 15593 AAAAGTATAGGTGATCCATCTGAAACCCCTTATTGCAAACCAGGGTCACTCACTGACCCT K S I G D P S E T P Y C K P G S L T D P K V - V I H L K P L I A N Q G H S L T L K K Y R - S I - N P L L Q T R V T H - P . . . . . . 15533 GCAATAAAAGGAAAGATAGCCATATGTCAGGCAGGTGTCGTTTCAAATATTGAAAAAGGA A I K G K I A I C Q A G V V S N I E K G Q - K E R - P Y V R Q V S F Q I L K K D C N K R K D S H M S G R C R F K Y - K R . . . . . . 15473 CAAGCTGTGAAGGATGCTGGAGGTGTTGGCATGATTGTCATCAACCCATCACAATATGGT Q A V K D A G G V G M I V I N P S Q Y G K L - R M L E V L A - L S S T H H N M V T S C E G C W R C W H D C H Q P I T I W . . . . . . 15413 GTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCATTGGTTGTTTCAGCTGCAGATGGA V T K S A D A H V L P A L V V S A A D G S L N Q L M L M F F Q H W L F Q L Q M E C H - I S - C S C S S S I G C F S C R W . . . . . . 15353 AGCAAAATTCTTGATTATACCAACTCAATATCGAACCCTATTGCTACAATCACAATCCAA S K I L D Y T N S I S N P I A T I T I Q A K F L I I P T Q Y R T L L L Q S Q S K K Q N S - L Y Q L N I E P Y C Y N H N P . . . . . . 15293 GGAACAGTAATTGGAGATAAAAATGCTCCCATAGTTGCTGCATTTTCTTCTCGCGGACCA G T V I G D K N A P I V A A F S S R G P E Q - L E I K M L P - L L H F L L A D Q R N S N W R - K C S H S C C I F F S R T . . . . . . 15233 AGTAAACCTAATCCTGGGATCTTGAAACCTGACATAATTGGTCCTGGTGTTAATATCCTC S K P N P G I L K P D I I G P G V N I L V N L I L G S - N L T - L V L V L I S S K - T - S W D L E T - H N W S W C - Y P . . . . . . 15173 GCTGCTTGGCCTACTTCTGTGGATGACAACAAGGACACCAAATCCACATTCAATATTATA A A W P T S V D D N K D T K S T F N I I L L G L L L W M T T R T P N P H S I L Y R C L A Y F C G - Q Q G H Q I H I Q Y Y . . . . . . 15113 TCAGGCACCTCGATGTCTTGCCCACACCTTAGTGGCATAGCAGCTCTGCTGAAGAGCACA S G T S M S C P H L S G I A A L L K S T Q A P R C L A H T L V A - Q L C - R A H I R H L D V L P T P - W H S S S A E E H . . . . . . 15053 CATCCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATCATGACAACCGCTTACACGTTA H P D W S P A A I K S A I M T T A Y T L I L I G L L L L L S L Q S - Q P L T R - T S - L V S C C Y - V C N H D N R L H V . . . . . . 14993 AACCTTGACAGTAGTCCAATACTAGATGAAAGGTTACTTCCTGCAGACATCTTTGCAATT N L D S S P I L D E R L L P A D I F A I T L T V V Q Y - M K G Y F L Q T S L Q L K P - Q - S N T R - K V T S C R H L C N . . . . . . 14933 GGTGCAGGACACGTTAATCCATCAAGTGCAAATGATCCAGGACTAGTTTATGATACCCCC G A G H V N P S S A N D P G L V Y D T P V Q D T L I H Q V Q M I Q D - F M I P P W C R T R - S I K C K - S R T S L - Y P . . . . . . 14873 TCCGAGGACTACTTCCCGTATTTATGTGGTTTGGGATACACAAATGCACAGGTAAGTAGC S E D Y F P Y L C G L G Y T N A Q V S S P R T T S R I Y V V W D T Q M H R - V A L R G L L P V F M W F G I H K C T G K - . . . . . . 14813 CTGTTACGACGCACAGTGAATTGCTTGGAAGTGAATAGTATCCCTGAAGCACAATTAAAC L L R R T V N C L E V N S I P E A Q L N C Y D A Q - I A W K - I V S L K H N - T P V T T H S E L L G S E - Y P - S T I K . . . . . . 14753 TATCCTTCTTTTTCCATATATGGACTTGGATCAACTCCTCAGACATATACAAGAACTGTG Y P S F S I Y G L G S T P Q T Y T R T V I L L F P Y M D L D Q L L R H I Q E L - L S F F F H I W T W I N S S D I Y K N C . . . . . . 14693 ACCAACGTTGGTGATGCTACATCATCTTACAAAGTGAAGATAGCTTCACTTATAGGAGTT T N V G D A T S S Y K V K I A S L I G V P T L V M L H H L T K - R - L H L - E L D Q R W - C Y I I L Q S E D S F T Y R S . . . . . . 14633 GCCGTAGAAGTTGTACCCACAGAGCTAAATTTCTCCGAGTTGAACCAGAAGTTAACATAC A V E V V P T E L N F S E L N Q K L T Y P - K L Y P Q S - I S P S - T R S - H T C R R S C T H R A K F L R V E P E V N I . . . . . . 14573 CAAGTGACATTTTCCAAGACAACCAGCAGTTCAGAAGTTGTGGTTGTTGAGGGATTCTTG Q V T F S K T T S S S E V V V V E G F L K - H F P R Q P A V Q K L W L L R D S - P S D I F Q D N Q Q F R S C G C - G I L . . . 14513 AAATGGACTTCTACTAGGCACTCTGTG K W T S T R H S V N G L L L G T L E M D F Y - A L C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-5_AGS-2_PPS_1 (15713 14487) (frame '1'; 1227 bp, 409 residues) 1 TIDRKIKATV TLGNTEEFEG ESAYRPQISD STYFTLYDAA KSIGDPSETP YCKPGSLTDP 61 AIKGKIAICQ AGVVSNIEKG QAVKDAGGVG MIVINPSQYG VTKSADAHVL PALVVSAADG 121 SKILDYTNSI SNPIATITIQ GTVIGDKNAP IVAAFSSRGP SKPNPGILKP DIIGPGVNIL 181 AAWPTSVDDN KDTKSTFNII SGTSMSCPHL SGIAALLKST HPDWSPAAIK SAIMTTAYTL 241 NLDSSPILDE RLLPADIFAI GAGHVNPSSA NDPGLVYDTP SEDYFPYLCG LGYTNAQVSS 301 LLRRTVNCLE VNSIPEAQLN YPSFSIYGLG STPQTYTRTV TNVGDATSSY KVKIASLIGV 361 AVEVVPTELN FSELNQKLTY QVTFSKTTSS SEVVVVEGFL KWTSTRHSV 3-phase translation of AGS-2 (+strand): . . . . . . 14487 CACAGAGTGCCTAGTAGAAGTCCATTTCAAGAATCCCTCAACAACCACAACTTCTGAACT H R V P S R S P F Q E S L N N H N F - T T E C L V E V H F K N P S T T T T S E L Q S A - - K S I S R I P Q Q P Q L L N . . . . . . 14547 GCTGGTTGTCTTGGAAAATGTCACTTGGTATGTTAACTTCTGGTTCAACTCGGAGAAATT A G C L G K C H L V C - L L V Q L G E I L V V L E N V T W Y V N F W F N S E K F C W L S W K M S L G M L T S G S T R R N . . . . . . 14607 TAGCTCTGTGGGTACAACTTCTACGGCAACTCCTATAAGTGAAGCTATCTTCACTTTGTA - L C G Y N F Y G N S Y K - S Y L H F V S S V G T T S T A T P I S E A I F T L - L A L W V Q L L R Q L L - V K L S S L C . . . . . . 14667 AGATGATGTAGCATCACCAACGTTGGTCACAGTTCTTGTATATGTCTGAGGAGTTGATCC R - C S I T N V G H S S C I C L R S - S D D V A S P T L V T V L V Y V - G V D P K M M - H H Q R W S Q F L Y M S E E L I . . . . . . 14727 AAGTCCATATATGGAAAAAGAAGGATAGTTTAATTGTGCTTCAGGGATACTATTCACTTC K S I Y G K R R I V - L C F R D T I H F S P Y M E K E G - F N C A S G I L F T S Q V H I W K K K D S L I V L Q G Y Y S L . . . . . . 14787 CAAGCAATTCACTGTGCGTCGTAACAGGCTACTTACCTGTGCATTTGTGTATCCCAAACC Q A I H C A S - Q A T Y L C I C V S Q T K Q F T V R R N R L L T C A F V Y P K P P S N S L C V V T G Y L P V H L C I P N . . . . . . 14847 ACATAAATACGGGAAGTAGTCCTCGGAGGGGGTATCATAAACTAGTCCTGGATCATTTGC T - I R E V V L G G G I I N - S W I I C H K Y G K - S S E G V S - T S P G S F A H I N T G S S P R R G Y H K L V L D H L . . . . . . 14907 ACTTGATGGATTAACGTGTCCTGCACCAATTGCAAAGATGTCTGCAGGAAGTAACCTTTC T - W I N V S C T N C K D V C R K - P F L D G L T C P A P I A K M S A G S N L S H L M D - R V L H Q L Q R C L Q E V T F . . . . . . 14967 ATCTAGTATTGGACTACTGTCAAGGTTTAACGTGTAAGCGGTTGTCATGATTGCAGACTT I - Y W T T V K V - R V S G C H D C R L S S I G L L S R F N V - A V V M I A D L H L V L D Y C Q G L T C K R L S - L Q T . . . . . . 15027 AATAGCAGCAGGAGACCAATCAGGATGTGTGCTCTTCAGCAGAGCTGCTATGCCACTAAG N S S R R P I R M C A L Q Q S C Y A T K I A A G D Q S G C V L F S R A A M P L R - - Q Q E T N Q D V C S S A E L L C H - . . . . . . 15087 GTGTGGGCAAGACATCGAGGTGCCTGATATAATATTGAATGTGGATTTGGTGTCCTTGTT V W A R H R G A - Y N I E C G F G V L V C G Q D I E V P D I I L N V D L V S L L G V G K T S R C L I - Y - M W I W C P C . . . . . . 15147 GTCATCCACAGAAGTAGGCCAAGCAGCGAGGATATTAACACCAGGACCAATTATGTCAGG V I H R S R P S S E D I N T R T N Y V R S S T E V G Q A A R I L T P G P I M S G C H P Q K - A K Q R G Y - H Q D Q L C Q . . . . . . 15207 TTTCAAGATCCCAGGATTAGGTTTACTTGGTCCGCGAGAAGAAAATGCAGCAACTATGGG F Q D P R I R F T W S A R R K C S N Y G F K I P G L G L L G P R E E N A A T M G V S R S Q D - V Y L V R E K K M Q Q L W . . . . . . 15267 AGCATTTTTATCTCCAATTACTGTTCCTTGGATTGTGATTGTAGCAATAGGGTTCGATAT S I F I S N Y C S L D C D C S N R V R Y A F L S P I T V P W I V I V A I G F D I E H F Y L Q L L F L G L - L - Q - G S I . . . . . . 15327 TGAGTTGGTATAATCAAGAATTTTGCTTCCATCTGCAGCTGAAACAACCAATGCTGGAAG - V G I I K N F A S I C S - N N Q C W K E L V - S R I L L P S A A E T T N A G R L S W Y N Q E F C F H L Q L K Q P M L E . . . . . . 15387 AACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGACAATCATGCC N M S I S - F S D T I L - W V D D N H A T - A S A D L V T P Y C D G L M T I M P E H E H Q L I - - H H I V M G - - Q S C . . . . . . 15447 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTTTCAATATTTGAAACGACACCTGCCTG N T S S I L H S L S F F N I - N D T C L T P P A S F T A C P F S I F E T T P A - Q H L Q H P S Q L V L F Q Y L K R H L P . . . . . . 15507 ACATATGGCTATCTTTCCTTTTATTGCAGGGTCAGTGAGTGACCCTGGTTTGCAATAAGG T Y G Y L S F Y C R V S E - P W F A I R H M A I F P F I A G S V S D P G L Q - G D I W L S F L L L Q G Q - V T L V C N K . . . . . . 15567 GGTTTCAGATGGATCACCTATACTTTTTGCAGCATCATATAGAGTGAAGTATGTAGAGTC G F R W I T Y T F C S I I - S E V C R V V S D G S P I L F A A S Y R V K Y V E S G F Q M D H L Y F L Q H H I E - S M - S . . . . . . 15627 GGAAATCTGTGGACGATAAGCAGATTCCCCTTCAAATTCCTCTGTATTTCCAAGTGTAAC G N L W T I S R F P F K F L C I S K C N E I C G R - A D S P S N S S V F P S V T R K S V D D K Q I P L Q I P L Y F Q V - . . . 15687 AGTGGCTTTTATCTTTCTATCAATAGT S G F Y L S I N S V A F I F L S I Q W L L S F Y Q - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-5_AGS-2_PPS_1 (15004 15339) (frame '2'; 333 bp, 111 residues) 1 AVVMIADLIA AGDQSGCVLF SRAAMPLRCG QDIEVPDIIL NVDLVSLLSS TEVGQAARIL 61 TPGPIMSGFK IPGLGLLGPR EENAATMGAF LSPITVPWIV IVAIGFDIEL V- >C08HBa0165B06.1+_PGL-5_AGS-2_PPS_2 (14678 14920) (frame '0'; 240 bp, 80 residues) 1 HHQRWSQFLY MSEELIQVHI WKKKDSLIVL QGYYSLPSNS LCVVTGYLPV HLCIPNHINT 61 GSSPRRGYHK LVLDHLHLMD - PGL 6 (- strand): 21553 18784 AGS-1 (19311 19270,19183 18784) SCR (e 0.810 d 0.000 a 0.000,e 0.841) Exon 1 19311 19270 ( 42 n); score: 0.810 Intron 1 19269 19184 ( 86 n); Pd: 0.000 Pa: 0.000 Exon 2 19183 18784 ( 400 n); score: 0.841 PGS (19311 19270,19183 18784) SGN-E542827- 3-phase translation of AGS-1 (-strand): . . . . . : . 19311 GGAAAAGGGTCCGATATACCCCTCAATTTTGTCATTTGGAGC : GCTCACATATACCCTTCA G K G S D I P L N F V I W S : A H I Y P S E K G P I Y P S I L S F G A : L T Y T L H K R V R Y T P Q F C H L E : R S H I P F . . . . . . 19165 TTTAACGGAAGTTAAAAAATTAGTTTTAAATTTATATTTATTACTTCTAATTTTAAAAAA F N G S - K I S F K F I F I T S N F K K L T E V K K L V L N L Y L L L L I L K K I - R K L K N - F - I Y I Y Y F - F - K . . . . . . 19105 AAAATTATTTAGGGGTATATATGATTCTTTTATCAAAGTTCAAGGTATATTTTAATTTTT K I I - G Y I - F F Y Q S S R Y I L I F K L F R G I Y D S F I K V Q G I F - F F K N Y L G V Y M I L L S K F K V Y F N F . . . . . . 19045 TTGATACATAAATTATTTTTTGACTTCTTTTATTATAATTATTTGAATTTCTTATTCTTA L I H K L F F D F F Y Y N Y L N F L F L - Y I N Y F L T S F I I I I - I S Y S Y F D T - I I F - L L L L - L F E F L I L . . . . . . 18985 TTTTGTTTTTTTCTTTCATTCCTTAGTTTAAAGAATAAAAAAATTAAACTATATTTTTGT F C F F L S F L S L K N K K I K L Y F C F V F F F H S L V - R I K K L N Y I F V I L F F S F I P - F K E - K N - T I F L . . . . . . 18925 GTGTATTGTAATTTACTCTCGTATTCGAAGAAAAAATTTGATCATGTACAATAAGTTTTA V Y C N L L S Y S K K K F D H V Q - V L C I V I Y S R I R R K N L I M Y N K F Y C V L - F T L V F E E K I - S C T I S F . . . . . . 18865 CAAGAATATTAGTGAAACATAAATAAATCTGATTATCAAAATAATAATTATAAATTAGTC Q E Y - - N I N K S D Y Q N N N Y K L V K N I S E T - I N L I I K I I I I N - S T R I L V K H K - I - L S K - - L - I S . . . 18805 ATTGAAACAAAAAAAAAGTCAA I E T K K K S L K Q K K S Q H - N K K K V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-6_AGS-1_PPS_1 (19081 18872) (frame '1'; 207 bp, 69 residues) 1 FFYQSSRYIL IFLIHKLFFD FFYYNYLNFL FLFCFFLSFL SLKNKKIKLY FCVYCNLLSY 61 SKKKFDHVQ- AGS-2 (19311 18872) SCR (e 0.907) Exon 1 19311 18872 ( 440 n); score: 0.907 PGS (19311 18872) SGN-E243215- PGS (19311 19000) SGN-E578389+ 3-phase translation of AGS-2 (-strand): . . . . . . 19311 GGAAAAGGGTCCGATATACCCCTCAATTTTGTCATTTGGAGCTGATATAACTCTCGTTAT G K G S D I P L N F V I W S - Y N S R Y E K G P I Y P S I L S F G A D I T L V I K R V R Y T P Q F C H L E L I - L S L . . . . . . 19251 AAAAGTGGCTCATATATGCCCTTACCGTTATACAAACGGCTCACATATACCCCTGCCGTT K S G S Y M P L P L Y K R L T Y T P A V K V A H I C P Y R Y T N G S H I P L P L - K W L I Y A L T V I Q T A H I Y P C R . . . . . . 19191 ACAAAATGGCTCACATATACCCTTCATTTAACGGAAGTTAAAAAATTAGTTTTAAATTTA T K W L T Y T L H L T E V K K L V L N L Q N G S H I P F I - R K L K N - F - I Y Y K M A H I Y P S F N G S - K I S F K F . . . . . . 19131 TATTTATTACTTCTAATTTTAAAAAAAAAATTATTTAGGGGTATATATGATTCTTTTATC Y L L L L I L K K K L F R G I Y D S F I I Y Y F - F - K K N Y L G V Y M I L L S I F I T S N F K K K I I - G Y I - F F Y . . . . . . 19071 AAAGTTCAAGGTATATTTTAATTTTTTTGATACATAAATTATTTTTTGACTTCTTTTATT K V Q G I F - F F - Y I N Y F L T S F I K F K V Y F N F F D T - I I F - L L L L Q S S R Y I L I F L I H K L F F D F F Y . . . . . . 19011 ATAATTATTTGAATTTCTTATTCTTATTTTGTTTTTTTCTTTCATTCCTTAGTTTAAAGA I I I - I S Y S Y F V F F F H S L V - R - L F E F L I L I L F F S F I P - F K E Y N Y L N F L F L F C F F L S F L S L K . . . . . . 18951 ATAAAAAAATTAAACTATATTTTTGTGTGTATTGTAATTTACTCTCGTATTCGAAGAAAA I K K L N Y I F V C I V I Y S R I R R K - K N - T I F L C V L - F T L V F E E K N K K I K L Y F C V Y C N L L S Y S K K . . 18891 AATTTGATCATGTACAATAA N L I M Y N I - S C T I K F D H V Q - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-6_AGS-2_PPS_1 (19266 19051) (frame '1'; 213 bp, 71 residues) 1 YNSRYKSGSY MPLPLYKRLT YTPAVTKWLT YTLHLTEVKK LVLNLYLLLL ILKKKLFRGI 61 YDSFIKVQGI F- >C08HBa0165B06.1-_PGL-6_AGS-2_PPS_2 (19081 18872) (frame '0'; 207 bp, 69 residues) 1 FFYQSSRYIL IFLIHKLFFD FFYYNYLNFL FLFCFFLSFL SLKNKKIKLY FCVYCNLLSY 61 SKKKFDHVQ- 3-phase translation of AGS-2 (+strand): . . . . . . 18872 TTATTGTACATGATCAAATTTTTTCTTCGAATACGAGAGTAAATTACAATACACACAAAA L L Y M I K F F L R I R E - I T I H T K Y C T - S N F F F E Y E S K L Q Y T Q K I V H D Q I F S S N T R V N Y N T H K . . . . . . 18932 ATATAGTTTAATTTTTTTATTCTTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAA I - F N F F I L - T K E - K K K T K - E Y S L I F L F F K L R N E R K K Q N K N N I V - F F Y S L N - G M K E K N K I R . . . . . . 18992 TAAGAAATTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATCAAAAAAAT - E I Q I I I I K E V K K - F M Y Q K N K K F K - L - - K K S K N N L C I K K I I R N S N N Y N K R S Q K I I Y V S K K . . . . . . 19052 TAAAATATACCTTGAACTTTGATAAAAGAATCATATATACCCCTAAATAATTTTTTTTTT - N I P - T L I K E S Y I P L N N F F F K I Y L E L - - K N H I Y P - I I F F L L K Y T L N F D K R I I Y T P K - F F F . . . . . . 19112 AAAATTAGAAGTAATAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGG K I R S N K Y K F K T N F L T S V K - R K L E V I N I N L K L I F - L P L N E G - N - K - - I - I - N - F F N F R - M K . . . . . . 19172 GTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGTAAG V Y V S H F V T A G V Y V S R L Y N G K Y M - A I L - R Q G Y M - A V C I T V R G I C E P F C N G R G I C E P F V - R - . . . . . . 19232 GGCATATATGAGCCACTTTTATAACGAGAGTTATATCAGCTCCAAATGACAAAATTGAGG G I Y E P L L - R E L Y Q L Q M T K L R A Y M S H F Y N E S Y I S S K - Q N - G G H I - A T F I T R V I S A P N D K I E . . 19292 GGTATATCGGACCCTTTTCC G I S D P F V Y R T L F G Y I G P F S Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (21553 19472) SCR (e 0.888) Exon 1 21553 19472 (2082 n); score: 0.888 PGS (19610 19472) SGN-E353214+ PGS (19910 19479) SGN-E307529+ PGS (20097 19654) SGN-E287935- PGS (20467 19760) SGN-E213673+ PGS (20411 19780) SGN-E213088+ PGS (20548 19886) SGN-E212584+ PGS (20503 19912) SGN-E329031+ PGS (20343 19938) SGN-E317658+ PGS (20602 19998) SGN-E308535+ PGS (20725 20066) SGN-E397025+ PGS (20776 20160) SGN-E306389+ PGS (20548 20229) SGN-E200689+ PGS (20747 20259) SGN-E210009+ PGS (20807 20304) SGN-E301429+ PGS (20994 20343) SGN-E335107+ PGS (20903 20357) SGN-E208913+ PGS (21005 20431) SGN-E244401+ PGS (21005 20449) SGN-E244422+ PGS (21553 20970) SGN-E539488+ 3-phase translation of AGS-3 (-strand): . . . . . . 21553 GAGGCACCACGTTTGATATATTCCTATCGAAATGTCTTAACAGGCTTTGCAGCTAAGTTA E A P R L I Y S Y R N V L T G F A A K L R H H V - Y I P I E M S - Q A L Q L S Y G T T F D I F L S K C L N R L C S - V . . . . . . 21493 TCAGAAGAAGATATAAAGGAAATGGAAAAAAAGGAAGGATTTGTTTCTGCACGCCCCCAG S E E D I K E M E K K E G F V S A R P Q Q K K I - R K W K K R K D L F L H A P S I R R R Y K G N G K K G R I C F C T P P . . . . . . 21433 CAGTTTGTTAGTTTACACACCACACATAGTGTCAATTTCTTGGGATTGCAACAGAACATG Q F V S L H T T H S V N F L G L Q Q N M S L L V Y T P H I V S I S W D C N R T W A V C - F T H H T - C Q F L G I A T E H . . . . . . 21373 GGGTTCTGGAAAGACTCTAATTATGGGAAAGGTGTGATCATCGGAGTTCTAGACACTGGA G F W K D S N Y G K G V I I G V L D T G G S G K T L I M G K V - S S E F - T L E G V L E R L - L W E R C D H R S S R H W . . . . . . 21313 ATTCTTCCTGACCATCCTTCATTTAGTGACGTTGGGATGCCTACCCCACCTGCTAAGTGG I L P D H P S F S D V G M P T P P A K W F F L T I L H L V T L G C L P H L L S G N S S - P S F I - - R W D A Y P T C - V . . . . . . 21253 AAAGGAGTTTGTGAGTCAAATTTTATGAACAAGTGTAACAAAAAGCTCATTGGAGCGAGG K G V C E S N F M N K C N K K L I G A R K E F V S Q I L - T S V T K S S L E R G E R S L - V K F Y E Q V - Q K A H W S E . . . . . . 21193 TCTTACCAACTTGGCAATGGTTCCCCGATAGATGGTAATGGACACGGTACACACACAGCA S Y Q L G N G S P I D G N G H G T H T A L T N L A M V P R - M V M D T V H T Q Q V L P T W Q W F P D R W - W T R Y T H S . . . . . . 21133 AGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAATGTATATGGCAATGCTAATGGAACT S T A A G A F V K G A N V Y G N A N G T A Q L Q E P L - K V L M Y M A M L M E L K H S C R S L C E R C - C I W Q C - W N . . . . . . 21073 GCAGTTGGTGTTGCACCTCTTGCCCATATAGCCATATATAAGGTATGTGGTTCCGATGGC A V G V A P L A H I A I Y K V C G S D G Q L V L H L L P I - P Y I R Y V V P M A C S W C C T S C P Y S H I - G M W F R W . . . . . . 21013 AAGTGTTCTGACAGCGATATTTTAGCTGCCATGGATTCAGCTATAGATGATGGAGTAGAT K C S D S D I L A A M D S A I D D G V D S V L T A I F - L P W I Q L - M M E - I Q V F - Q R Y F S C H G F S Y R - W S R . . . . . . 20953 ATTATTTCAATGTCCCTTGGTGGAGGTCCAGTCCCTTTCCATAGTGACAATATTGCTCTC I I S M S L G G G P V P F H S D N I A L L F Q C P L V E V Q S L S I V T I L L S Y Y F N V P W W R S S P F P - - Q Y C S . . . . . . 20893 GGGGCATACAGTGCAACAGAAAGAGGGATTCTTGTAAGTGCCTCTGCTGGAAATAGTGGT G A Y S A T E R G I L V S A S A G N S G G H T V Q Q K E G F L - V P L L E I V V R G I Q C N R K R D S C K C L C W K - W . . . . . . 20833 CCATCCCTTATCACAGCAGGGAACACCGCCCCTTGGATTCTTACGGTAGGCGCCAGCACT P S L I T A G N T A P W I L T V G A S T H P L S Q Q G T P P L G F L R - A P A L S I P Y H S R E H R P L D S Y G R R Q H . . . . . . 20773 ACTGATAGAAAGATAAAAGTTACTGTTACACTTGGAAATACAGAGGAATTTGAAGGGGAA T D R K I K V T V T L G N T E E F E G E L I E R - K L L L H L E I Q R N L K G K Y - - K D K S Y C Y T W K Y R G I - R G . . . . . . 20713 GCTTCTTATCGTCCACAGATTTCCGACTCAAAATTCTTCACTCTGTATGATGCTTCAAAA A S Y R P Q I S D S K F F T L Y D A S K L L I V H R F P T Q N S S L C M M L Q K S F L S S T D F R L K I L H S V - C F K . . . . . . 20653 GGTAAAGGTGATCCATCTAAAACCCCTTACTGCAAACCAGGGTCACTCACTGACCCTGCA G K G D P S K T P Y C K P G S L T D P A V K V I H L K P L T A N Q G H S L T L Q R - R - S I - N P L L Q T R V T H - P C . . . . . . 20593 ATAAAAGGAAAGATAGTCATATGTTATCCAGGTGTCGTTTCTAAGGTTGTAAAAGGACAA I K G K I V I C Y P G V V S K V V K G Q - K E R - S Y V I Q V S F L R L - K D K N K R K D S H M L S R C R F - G C K R T . . . . . . 20533 GCTGTGAAGGATGCTGGAGGTGTTGGTATGATTGCCATCAACCTGCCAGAAGATGGTGTC A V K D A G G V G M I A I N L P E D G V L - R M L E V L V - L P S T C Q K M V S S C E G C W R C W Y D C H Q P A R R W C . . . . . . 20473 ACAAAATCAGCTGATGCTCATGTTCTTCCAGCTTTGGAGGTTTCAGCTGCAGATGGAATC T K S A D A H V L P A L E V S A A D G I Q N Q L M L M F F Q L W R F Q L Q M E S H K I S - C S C S S S F G G F S C R W N . . . . . . 20413 AGAATTCTTACTTATACAAACTCAATATCAAACCCTACAGCTAAAATCACATTCCAAGGA R I L T Y T N S I S N P T A K I T F Q G E F L L I Q T Q Y Q T L Q L K S H S K E Q N S Y L Y K L N I K P Y S - N H I P R . . . . . . 20353 ACAATAATTGGAGATGAAAACGCTCCCATAGTTGCTTCATTTTCTTCTCGCGGACCAAAT T I I G D E N A P I V A S F S S R G P N Q - L E M K T L P - L L H F L L A D Q I N N N W R - K R S H S C F I F F S R T K . . . . . . 20293 AAACCTAGTCCTGGCATCTTGAAACCTGACATAATCGGTCCTGGTGTTAATATCCTTGCT K P S P G I L K P D I I G P G V N I L A N L V L A S - N L T - S V L V L I S L L - T - S W H L E T - H N R S W C - Y P C . . . . . . 20233 GCTTGGCCTACCTCCGTGGATGACAACAAAAAAACCAAATCCACATTCAATATTATATCA A W P T S V D D N K K T K S T F N I I S L G L P P W M T T K K P N P H S I L Y Q C L A Y L R G - Q Q K N Q I H I Q Y Y I . . . . . . 20173 GGCACCTCGATGTCTTGCCCTCACCTTAGTGGCGTAGCAGCTCTGCTGAAGAGCACACAT G T S M S C P H L S G V A A L L K S T H A P R C L A L T L V A - Q L C - R A H I R H L D V L P S P - W R S S S A E E H T . . . . . . 20113 CCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATCATGACAACCGCTTACACTTTAAAC P D W S P A A I K S A I M T T A Y T L N L I G L L L L L S L Q S - Q P L T L - T S - L V S C C Y - V C N H D N R L H F K . . . . . . 20053 CTTGCCAGTAGTCCAATACTAGATGAAAGGTTACTTCCTGCAGACATCTTTGCAATTGGT L A S S P I L D E R L L P A D I F A I G L P V V Q Y - M K G Y F L Q T S L Q L V P C Q - S N T R - K V T S C R H L C N W . . . . . . 19993 GCAGGACACGTTAATCCATCAAGTGCAAATGATCCAGGACTAGTTTATGATACCCCCTCC A G H V N P S S A N D P G L V Y D T P S Q D T L I H Q V Q M I Q D - F M I P P P C R T R - S I K C K - S R T S L - Y P L . . . . . . 19933 GAGGACTATTTCCCGTATTTATGTGGTTTGAGGTACACAAATGCACAGGTAAGTAAACTG E D Y F P Y L C G L R Y T N A Q V S K L R T I S R I Y V V - G T Q M H R - V N C R G L F P V F M W F E V H K C T G K - T . . . . . . 19873 TTACAACGCAAGGTAAATTGCTTAGAAGTAAAGAGTATCCCTGAAGCAGAATTAAACTAT L Q R K V N C L E V K S I P E A E L N Y Y N A R - I A - K - R V S L K Q N - T I V T T Q G K L L R S K E Y P - S R I K L . . . . . . 19813 CCTTCGTTTTCCATATTTGGACTTGGATCAACTCCTCAGACATACACAAGAACTGTGACC P S F S I F G L G S T P Q T Y T R T V T L R F P Y L D L D Q L L R H T Q E L - P S F V F H I W T W I N S S D I H K N C D . . . . . . 19753 AACGTTGGTGATGTTGCATCATCTTACAAAGTGGAGATAGCTTCACCTATAGGAGTTGCC N V G D V A S S Y K V E I A S P I G V A T L V M L H H L T K W R - L H L - E L P Q R W - C C I I L Q S G D S F T Y R S C . . . . . . 19693 ATAGAAGTTGTACCCACAGAACTAAATTTCTCCAAGTTGAACCAGAAGTTAACATACCAA I E V V P T E L N F S K L N Q K L T Y Q - K L Y P Q N - I S P S - T R S - H T K H R S C T H R T K F L Q V E P E V N I P . . . . . . 19633 GTGACATTTTCCAAGACAACCAGCAGTTCAGAAGTTGTGGTTGTTGAGGGATTCTTGAAG V T F S K T T S S S E V V V V E G F L K - H F P R Q P A V Q K L W L L R D S - S S D I F Q D N Q Q F R S C G C - G I L E . . . . . . 19573 TGGACTTCTACTAGGCACTCTGTGAGAAGTCCAATTGCAGTTGTATTGGTCTAGTGAAAA W T S T R H S V R S P I A V V L V - - K G L L L G T L - E V Q L Q L Y W S S E K V D F Y - A L C E K S N C S C I G L V K . . . . . 19513 ATTGGCTATATATATAAGTGCATAAAGTACTCGAACATTTGA I G Y I Y K C I K Y S N I - L A I Y I S A - S T R T F N W L Y I - V H K V L E H L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-6_AGS-3_PPS_1 (21553 19520) (frame '1'; 2031 bp, 677 residues) 1 EAPRLIYSYR NVLTGFAAKL SEEDIKEMEK KEGFVSARPQ QFVSLHTTHS VNFLGLQQNM 61 GFWKDSNYGK GVIIGVLDTG ILPDHPSFSD VGMPTPPAKW KGVCESNFMN KCNKKLIGAR 121 SYQLGNGSPI DGNGHGTHTA STAAGAFVKG ANVYGNANGT AVGVAPLAHI AIYKVCGSDG 181 KCSDSDILAA MDSAIDDGVD IISMSLGGGP VPFHSDNIAL GAYSATERGI LVSASAGNSG 241 PSLITAGNTA PWILTVGAST TDRKIKVTVT LGNTEEFEGE ASYRPQISDS KFFTLYDASK 301 GKGDPSKTPY CKPGSLTDPA IKGKIVICYP GVVSKVVKGQ AVKDAGGVGM IAINLPEDGV 361 TKSADAHVLP ALEVSAADGI RILTYTNSIS NPTAKITFQG TIIGDENAPI VASFSSRGPN 421 KPSPGILKPD IIGPGVNILA AWPTSVDDNK KTKSTFNIIS GTSMSCPHLS GVAALLKSTH 481 PDWSPAAIKS AIMTTAYTLN LASSPILDER LLPADIFAIG AGHVNPSSAN DPGLVYDTPS 541 EDYFPYLCGL RYTNAQVSKL LQRKVNCLEV KSIPEAELNY PSFSIFGLGS TPQTYTRTVT 601 NVGDVASSYK VEIASPIGVA IEVVPTELNF SKLNQKLTYQ VTFSKTTSSS EVVVVEGFLK 661 WTSTRHSVRS PIAVVLV- 3-phase translation of AGS-3 (+strand): . . . . . . 19472 TCAAATGTTCGAGTACTTTATGCACTTATATATATAGCCAATTTTTCACTAGACCAATAC S N V R V L Y A L I Y I A N F S L D Q Y Q M F E Y F M H L Y I - P I F H - T N T K C S S T L C T Y I Y S Q F F T R P I . . . . . . 19532 AACTGCAATTGGACTTCTCACAGAGTGCCTAGTAGAAGTCCACTTCAAGAATCCCTCAAC N C N W T S H R V P S R S P L Q E S L N T A I G L L T E C L V E V H F K N P S T Q L Q L D F S Q S A - - K S T S R I P Q . . . . . . 19592 AACCACAACTTCTGAACTGCTGGTTGTCTTGGAAAATGTCACTTGGTATGTTAACTTCTG N H N F - T A G C L G K C H L V C - L L T T T S E L L V V L E N V T W Y V N F W Q P Q L L N C W L S W K M S L G M L T S . . . . . . 19652 GTTCAACTTGGAGAAATTTAGTTCTGTGGGTACAACTTCTATGGCAACTCCTATAGGTGA V Q L G E I - F C G Y N F Y G N S Y R - F N L E K F S S V G T T S M A T P I G E G S T W R N L V L W V Q L L W Q L L - V . . . . . . 19712 AGCTATCTCCACTTTGTAAGATGATGCAACATCACCAACGTTGGTCACAGTTCTTGTGTA S Y L H F V R - C N I T N V G H S S C V A I S T L - D D A T S P T L V T V L V Y K L S P L C K M M Q H H Q R W S Q F L C . . . . . . 19772 TGTCTGAGGAGTTGATCCAAGTCCAAATATGGAAAACGAAGGATAGTTTAATTCTGCTTC C L R S - S K S K Y G K R R I V - F C F V - G V D P S P N M E N E G - F N S A S M S E E L I Q V Q I W K T K D S L I L L . . . . . . 19832 AGGGATACTCTTTACTTCTAAGCAATTTACCTTGCGTTGTAACAGTTTACTTACCTGTGC R D T L Y F - A I Y L A L - Q F T Y L C G I L F T S K Q F T L R C N S L L T C A Q G Y S L L L S N L P C V V T V Y L P V . . . . . . 19892 ATTTGTGTACCTCAAACCACATAAATACGGGAAATAGTCCTCGGAGGGGGTATCATAAAC I C V P Q T T - I R E I V L G G G I I N F V Y L K P H K Y G K - S S E G V S - T H L C T S N H I N T G N S P R R G Y H K . . . . . . 19952 TAGTCCTGGATCATTTGCACTTGATGGATTAACGTGTCCTGCACCAATTGCAAAGATGTC - S W I I C T - W I N V S C T N C K D V S P G S F A L D G L T C P A P I A K M S L V L D H L H L M D - R V L H Q L Q R C . . . . . . 20012 TGCAGGAAGTAACCTTTCATCTAGTATTGGACTACTGGCAAGGTTTAAAGTGTAAGCGGT C R K - P F I - Y W T T G K V - S V S G A G S N L S S S I G L L A R F K V - A V L Q E V T F H L V L D Y W Q G L K C K R . . . . . . 20072 TGTCATGATTGCAGACTTAATAGCAGCAGGAGACCAATCAGGATGTGTGCTCTTCAGCAG C H D C R L N S S R R P I R M C A L Q Q V M I A D L I A A G D Q S G C V L F S R L S - L Q T - - Q Q E T N Q D V C S S A . . . . . . 20132 AGCTGCTACGCCACTAAGGTGAGGGCAAGACATCGAGGTGCCTGATATAATATTGAATGT S C Y A T K V R A R H R G A - Y N I E C A A T P L R - G Q D I E V P D I I L N V E L L R H - G E G K T S R C L I - Y - M . . . . . . 20192 GGATTTGGTTTTTTTGTTGTCATCCACGGAGGTAGGCCAAGCAGCAAGGATATTAACACC G F G F F V V I H G G R P S S K D I N T D L V F L L S S T E V G Q A A R I L T P W I W F F C C H P R R - A K Q Q G Y - H . . . . . . 20252 AGGACCGATTATGTCAGGTTTCAAGATGCCAGGACTAGGTTTATTTGGTCCGCGAGAAGA R T D Y V R F Q D A R T R F I W S A R R G P I M S G F K M P G L G L F G P R E E Q D R L C Q V S R C Q D - V Y L V R E K . . . . . . 20312 AAATGAAGCAACTATGGGAGCGTTTTCATCTCCAATTATTGTTCCTTGGAATGTGATTTT K - S N Y G S V F I S N Y C S L E C D F N E A T M G A F S S P I I V P W N V I L K M K Q L W E R F H L Q L L F L G M - F . . . . . . 20372 AGCTGTAGGGTTTGATATTGAGTTTGTATAAGTAAGAATTCTGATTCCATCTGCAGCTGA S C R V - Y - V C I S K N S D S I C S - A V G F D I E F V - V R I L I P S A A E - L - G L I L S L Y K - E F - F H L Q L . . . . . . 20432 AACCTCCAAAGCTGGAAGAACATGAGCATCAGCTGATTTTGTGACACCATCTTCTGGCAG N L Q S W K N M S I S - F C D T I F W Q T S K A G R T - A S A D F V T P S S G R K P P K L E E H E H Q L I L - H H L L A . . . . . . 20492 GTTGATGGCAATCATACCAACACCTCCAGCATCCTTCACAGCTTGTCCTTTTACAACCTT V D G N H T N T S S I L H S L S F Y N L L M A I I P T P P A S F T A C P F T T L G - W Q S Y Q H L Q H P S Q L V L L Q P . . . . . . 20552 AGAAACGACACCTGGATAACATATGACTATCTTTCCTTTTATTGCAGGGTCAGTGAGTGA R N D T W I T Y D Y L S F Y C R V S E - E T T P G - H M T I F P F I A G S V S D - K R H L D N I - L S F L L L Q G Q - V . . . . . . 20612 CCCTGGTTTGCAGTAAGGGGTTTTAGATGGATCACCTTTACCTTTTGAAGCATCATACAG P W F A V R G F R W I T F T F - S I I Q P G L Q - G V L D G S P L P F E A S Y R T L V C S K G F - M D H L Y L L K H H T . . . . . . 20672 AGTGAAGAATTTTGAGTCGGAAATCTGTGGACGATAAGAAGCTTCCCCTTCAAATTCCTC S E E F - V G N L W T I R S F P F K F L V K N F E S E I C G R - E A S P S N S S E - R I L S R K S V D D K K L P L Q I P . . . . . . 20732 TGTATTTCCAAGTGTAACAGTAACTTTTATCTTTCTATCAGTAGTGCTGGCGCCTACCGT C I S K C N S N F Y L S I S S A G A Y R V F P S V T V T F I F L S V V L A P T V L Y F Q V - Q - L L S F Y Q - C W R L P . . . . . . 20792 AAGAATCCAAGGGGCGGTGTTCCCTGCTGTGATAAGGGATGGACCACTATTTCCAGCAGA K N P R G G V P C C D K G W T T I S S R R I Q G A V F P A V I R D G P L F P A E - E S K G R C S L L - - G M D H Y F Q Q . . . . . . 20852 GGCACTTACAAGAATCCCTCTTTCTGTTGCACTGTATGCCCCGAGAGCAATATTGTCACT G T Y K N P S F C C T V C P E S N I V T A L T R I P L S V A L Y A P R A I L S L R H L Q E S L F L L H C M P R E Q Y C H . . . . . . 20912 ATGGAAAGGGACTGGACCTCCACCAAGGGACATTGAAATAATATCTACTCCATCATCTAT M E R D W T S T K G H - N N I Y S I I Y W K G T G P P P R D I E I I S T P S S I Y G K G L D L H Q G T L K - Y L L H H L . . . . . . 20972 AGCTGAATCCATGGCAGCTAAAATATCGCTGTCAGAACACTTGCCATCGGAACCACATAC S - I H G S - N I A V R T L A I G T T Y A E S M A A K I S L S E H L P S E P H T - L N P W Q L K Y R C Q N T C H R N H I . . . . . . 21032 CTTATATATGGCTATATGGGCAAGAGGTGCAACACCAACTGCAGTTCCATTAGCATTGCC L I Y G Y M G K R C N T N C S S I S I A L Y M A I W A R G A T P T A V P L A L P P Y I W L Y G Q E V Q H Q L Q F H - H C . . . . . . 21092 ATATACATTAGCACCTTTCACAAAGGCTCCTGCAGCTGTGCTTGCTGTGTGTGTACCGTG I Y I S T F H K G S C S C A C C V C T V Y T L A P F T K A P A A V L A V C V P C H I H - H L S Q R L L Q L C L L C V Y R . . . . . . 21152 TCCATTACCATCTATCGGGGAACCATTGCCAAGTTGGTAAGACCTCGCTCCAATGAGCTT S I T I Y R G T I A K L V R P R S N E L P L P S I G E P L P S W - D L A P M S F V H Y H L S G N H C Q V G K T S L Q - A . . . . . . 21212 TTTGTTACACTTGTTCATAAAATTTGACTCACAAACTCCTTTCCACTTAGCAGGTGGGGT F V T L V H K I - L T N S F P L S R W G L L H L F I K F D S Q T P F H L A G G V F C Y T C S - N L T H K L L S T - Q V G . . . . . . 21272 AGGCATCCCAACGTCACTAAATGAAGGATGGTCAGGAAGAATTCCAGTGTCTAGAACTCC R H P N V T K - R M V R K N S S V - N S G I P T S L N E G W S G R I P V S R T P - A S Q R H - M K D G Q E E F Q C L E L . . . . . . 21332 GATGATCACACCTTTCCCATAATTAGAGTCTTTCCAGAACCCCATGTTCTGTTGCAATCC D D H T F P I I R V F P E P H V L L Q S M I T P F P - L E S F Q N P M F C C N P R - S H L S H N - S L S R T P C S V A I . . . . . . 21392 CAAGAAATTGACACTATGTGTGGTGTGTAAACTAACAAACTGCTGGGGGCGTGCAGAAAC Q E I D T M C G V - T N K L L G A C R N K K L T L C V V C K L T N C W G R A E T P R N - H Y V W C V N - Q T A G G V Q K . . . . . . 21452 AAATCCTTCCTTTTTTTCCATTTCCTTTATATCTTCTTCTGATAACTTAGCTGCAAAGCC K S F L F F H F L Y I F F - - L S C K A N P S F F S I S F I S S S D N L A A K P Q I L P F F P F P L Y L L L I T - L Q S . . . . . 21512 TGTTAAGACATTTCGATAGGAATATATCAAACGTGGTGCCTC C - D I S I G I Y Q T W C L V K T F R - E Y I K R G A L L R H F D R N I S N V V P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-6_AGS-3_PPS_1 (20709 21191) (frame '2'; 480 bp, 160 residues) 1 EASPSNSSVF PSVTVTFIFL SVVLAPTVRI QGAVFPAVIR DGPLFPAEAL TRIPLSVALY 61 APRAILSLWK GTGPPPRDIE IISTPSSIAE SMAAKISLSE HLPSEPHTLY MAIWARGATP 121 TAVPLALPYT LAPFTKAPAA VLAVCVPCPL PSIGEPLPSW - >C08HBa0165B06.1+_PGL-6_AGS-3_PPS_2 (19708 19983) (frame '0'; 273 bp, 91 residues) 1 VKLSPLCKMM QHHQRWSQFL CMSEELIQVQ IWKTKDSLIL LQGYSLLLSN LPCVVTVYLP 61 VHLCTSNHIN TGNSPRRGYH KLVLDHLHLM D- >C08HBa0165B06.1+_PGL-6_AGS-3_PPS_3 (20154 20402) (frame '2'; 246 bp, 82 residues) 1 GQDIEVPDII LNVDLVFLLS STEVGQAARI LTPGPIMSGF KMPGLGLFGP REENEATMGA 61 FSSPIIVPWN VILAVGFDIE FV- >C08HBa0165B06.1+_PGL-6_AGS-3_PPS_4 (19524 19730) (frame '2'; 204 bp, 68 residues) 1 TNTTAIGLLT ECLVEVHFKN PSTTTTSELL VVLENVTWYV NFWFNLEKFS SVGTTSMATP 61 IGEAISTL- PGL 7 (- strand): 28224 26612 AGS-1 (28224 27301,27035 26612) SCR (e 0.812 d 0.000 a 0.000,e 0.827) Exon 1 28224 27301 ( 924 n); score: 0.812 Intron 1 27300 27036 ( 265 n); Pd: 0.000 Pa: 0.000 Exon 2 27035 26612 ( 424 n); score: 0.827 PGS (27576 27301,27035 26612) SGN-E548357- PGS (26962 26612) SGN-E237320- PGS (26748 26612) SGN-E376168- PGS (27025 26645) SGN-E307529+ PGS (27705 27344) SGN-E200689+ PGS (27769 27354) SGN-E282432+ PGS (27856 27374) SGN-E210009+ PGS (28103 27458) SGN-E335107+ PGS (28013 27473) SGN-E208913+ PGS (28114 27546) SGN-E244401+ PGS (28114 27564) SGN-E244422+ PGS (28013 27593) SGN-E208810+ PGS (28224 27758) SGN-E202140+ 3-phase translation of AGS-1 (-strand): . . . . . . 28224 TTTGCAAAAGGTGCTAATGTATTTGGGAATGCTAATGGCACTGCTGTTGGTGTTGCCCCT F A K G A N V F G N A N G T A V G V A P L Q K V L M Y L G M L M A L L L V L P L C K R C - C I W E C - W H C C W C C P . . . . . . 28164 CTTGCCCACCTAGCCATATATAAGGTTTGCAATTCTGATGGCGAGTGTCCTGACTGTGAT L A H L A I Y K V C N S D G E C P D C D L P T - P Y I R F A I L M A S V L T V I S C P P S H I - G L Q F - W R V S - L - . . . . . . 28104 ATTTTAGCTGCCATAGATTCAGCTATAGATGATGGAGTAGATATTCTTTCAATATCCTTG I L A A I D S A I D D G V D I L S I S L F - L P - I Q L - M M E - I F F Q Y P W Y F S C H R F S Y R - W S R Y S F N I L . . . . . . 28044 GGTGGATCTCCGAGCCCTTTCTATGATGACTGTATCGCTCTTGGGGCATACAGTGCAACA G G S P S P F Y D D C I A L G A Y S A T V D L R A L S M M T V S L L G H T V Q Q G W I S E P F L - - L Y R S W G I Q C N . . . . . . 27984 GAAAGAGGCATTCTTGTAAGTTCTTCTGCAGGCAATGAAGGTCCTTCTGTTGCCTCAGTG E R G I L V S S S A G N E G P S V A S V K E A F L - V L L Q A M K V L L L P Q W R K R H S C K F F C R Q - R S F C C L S . . . . . . 27924 GAAAAAGCAGCCCCGTGGATTCTTACAGTAGGTGCCAGCACACTTGATAGAAAGATAAAA E K A A P W I L T V G A S T L D R K I K K K Q P R G F L Q - V P A H L I E R - K G K S S P V D S Y S R C Q H T - - K D K . . . . . . 27864 GCTACTGTTAATCTCGGAAATAGAAAGAAATATGAAGGAGAATCAACTTATCGTCCAAAG A T V N L G N R K K Y E G E S T Y R P K L L L I S E I E R N M K E N Q L I V Q R S Y C - S R K - K E I - R R I N L S S K . . . . . . 27804 ATTTCCAGCTCAACATTCTTCACTCTATATGATGCTGCAAAAAATGCAAGTGAAACTCCT I S S S T F F T L Y D A A K N A S E T P F P A Q H S S L Y M M L Q K M Q V K L L D F Q L N I L H S I - C C K K C K - N S . . . . . . 27744 TATTGCAGACCAGGATCACTAACTGACCCTGCTGTAAGAGGAAAGATAGTATTATGTCTA Y C R P G S L T D P A V R G K I V L C L I A D Q D H - L T L L - E E R - Y Y V Y L L Q T R I T N - P C C K R K D S I M S . . . . . . 27684 CAAGATGATATTGTTTCCAATATTGAAAAAGGACAAGCTGTGAAGGATGCTGGAGGTGTT Q D D I V S N I E K G Q A V K D A G G V K M I L F P I L K K D K L - R M L E V L T R - Y C F Q Y - K R T S C E G C W R C . . . . . . 27624 GGCATGATTATCATCAACCAGCCAAGTTACGGTGCCACTAAATCAGCTGATGCTCATGTT G M I I I N Q P S Y G A T K S A D A H V A - L S S T S Q V T V P L N Q L M L M F W H D Y H Q P A K L R C H - I S - C S C . . . . . . 27564 CTTCCAGCAATGGATGTTTCAGCTGCAGATGGAACAAAAATCATTTCCTATATGCACTCA L P A M D V S A A D G T K I I S Y M H S F Q Q W M F Q L Q M E Q K S F P I C T Q S S S N G C F S C R W N K N H F L Y A L . . . . . . 27504 ACATCAAACCCTATTGCTAGAATCACATTCCATGGAACAGTAATTGGAGATAAATATGCT T S N P I A R I T F H G T V I G D K Y A H Q T L L L E S H S M E Q - L E I N M L N I K P Y C - N H I P W N S N W R - I C . . . . . . 27444 CCCATTGTAGCTGCATTTTCTTCTCGCGGACCAAGTGAAGCTAGTCCTGGAATCTTGAAA P I V A A F S S R G P S E A S P G I L K P L - L H F L L A D Q V K L V L E S - N S H C S C I F F S R T K - S - S W N L E . . . . . . 27384 CCTGACATAATCGGTCCTGGTGTTAATATCCTTGCTGCTTGGCCTACCTCTATGGATGGC P D I I G P G V N I L A A W P T S M D G L T - S V L V L I S L L L G L P L W M A T - H N R S W C - Y P C C L A Y L Y G W . . . : . . . 27324 AACAAAAACACCAAATCCACATTC : CTTATTTGTGTGGTTTGAACTACACAAATCCACAGG N K N T K S T F : L I C V V - T T Q I H R T K T P N P H S : L F V W F E L H K S T G Q Q K H Q I H I : P Y L C G L N Y T N P Q . . . . . . 26999 TAAGTAAACTCTTACAACGCAAAGTGAATTGCTGGGAGGTTGAAAGTATCCCTGAAGCAC - V N S Y N A K - I A G R L K V S L K H K - T L T T Q S E L L G G - K Y P - S T V S K L L Q R K V N C W E V E S I P E A . . . . . . 26939 AATTAAACTATCCTTCATTTTCCATATCCGGACTTGGATCAACTCCTCAGACATATACCA N - T I L H F P Y P D L D Q L L R H I P I K L S F I F H I R T W I N S S D I Y Q Q L N Y P S F S I S G L G S T P Q T Y T . . . . . . 26879 GAACAGTTACCAACGTTGGTGACGCCGAATCATCTTACAAAGTGGAGATAGCTTCACCAA E Q L P T L V T P N H L T K W R - L H Q N S Y Q R W - R R I I L Q S G D S F T K R T V T N V G D A E S S Y K V E I A S P . . . . . . 26819 AAGGTGTTGTCGTGGAAGTTGAACCCTCCGAGCTGAATTTCTCCGAGTTGAACCAGAAGT K V L S W K L N P P S - I S P S - T R S R C C R G S - T L R A E F L R V E P E V K G V V V E V E P S E L N F S E L N Q K . . . . . . 26759 TAACATACCAGGTAACGTTTTCCAAGACAATCAGCAGCTCACAGCCTGAGGTTGTTGAGG - H T R - R F P R Q S A A H S L R L L R N I P G N V F Q D N Q Q L T A - G C - G L T Y Q V T F S K T I S S S Q P E V V E . . . . . . 26699 GATTCTTGAAGTGGAATTCTAATACGTACTCTGTGAGAAGTCCAATTGCAGTTGTGTTAG D S - S G I L I R T L - E V Q L Q L C - I L E V E F - Y V L C E K S N C S C V S G F L K W N S N T Y S V R S P I A V V L . . . 26639 TATTGACTACATAAGTGCAGAAAATGCT Y - L H K C R K C I D Y I S A E N A V L T T - V Q K M Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-7_AGS-1_PPS_1 (28224 27301,27035 27018) (frame '1'; 939 bp, 313 residues) 1 FAKGANVFGN ANGTAVGVAP LAHLAIYKVC NSDGECPDCD ILAAIDSAID DGVDILSISL 61 GGSPSPFYDD CIALGAYSAT ERGILVSSSA GNEGPSVASV EKAAPWILTV GASTLDRKIK 121 ATVNLGNRKK YEGESTYRPK ISSSTFFTLY DAAKNASETP YCRPGSLTDP AVRGKIVLCL 181 QDDIVSNIEK GQAVKDAGGV GMIIINQPSY GATKSADAHV LPAMDVSAAD GTKIISYMHS 241 TSNPIARITF HGTVIGDKYA PIVAAFSSRG PSEASPGILK PDIIGPGVNI LAAWPTSMDG 301 NKNTKSTFLI CVV- AGS-2 (27885 26665) SCR (e 0.904) Exon 1 27885 26665 (1221 n); score: 0.904 PGS (27237 26665) SGN-E207413+ PGS (27582 26876) SGN-E213673+ PGS (27528 26895) SGN-E213088+ PGS (27702 26999) SGN-E212584+ PGS (27618 27029) SGN-E329031+ PGS (27458 27050) SGN-E317658+ PGS (27720 27113) SGN-E308535+ PGS (27769 27181) SGN-E397025+ PGS (27885 27275) SGN-E306389+ 3-phase translation of AGS-2 (-strand): . . . . . . 27885 ACACTTGATAGAAAGATAAAAGCTACTGTTAATCTCGGAAATAGAAAGAAATATGAAGGA T L D R K I K A T V N L G N R K K Y E G H L I E R - K L L L I S E I E R N M K E T - - K D K S Y C - S R K - K E I - R . . . . . . 27825 GAATCAACTTATCGTCCAAAGATTTCCAGCTCAACATTCTTCACTCTATATGATGCTGCA E S T Y R P K I S S S T F F T L Y D A A N Q L I V Q R F P A Q H S S L Y M M L Q R I N L S S K D F Q L N I L H S I - C C . . . . . . 27765 AAAAATGCAAGTGAAACTCCTTATTGCAGACCAGGATCACTAACTGACCCTGCTGTAAGA K N A S E T P Y C R P G S L T D P A V R K M Q V K L L I A D Q D H - L T L L - E K K C K - N S L L Q T R I T N - P C C K . . . . . . 27705 GGAAAGATAGTATTATGTCTACAAGATGATATTGTTTCCAATATTGAAAAAGGACAAGCT G K I V L C L Q D D I V S N I E K G Q A E R - Y Y V Y K M I L F P I L K K D K L R K D S I M S T R - Y C F Q Y - K R T S . . . . . . 27645 GTGAAGGATGCTGGAGGTGTTGGCATGATTATCATCAACCAGCCAAGTTACGGTGCCACT V K D A G G V G M I I I N Q P S Y G A T - R M L E V L A - L S S T S Q V T V P L C E G C W R C W H D Y H Q P A K L R C H . . . . . . 27585 AAATCAGCTGATGCTCATGTTCTTCCAGCAATGGATGTTTCAGCTGCAGATGGAACAAAA K S A D A H V L P A M D V S A A D G T K N Q L M L M F F Q Q W M F Q L Q M E Q K - I S - C S C S S S N G C F S C R W N K . . . . . . 27525 ATCATTTCCTATATGCACTCAACATCAAACCCTATTGCTAGAATCACATTCCATGGAACA I I S Y M H S T S N P I A R I T F H G T S F P I C T Q H Q T L L L E S H S M E Q N H F L Y A L N I K P Y C - N H I P W N . . . . . . 27465 GTAATTGGAGATAAATATGCTCCCATTGTAGCTGCATTTTCTTCTCGCGGACCAAGTGAA V I G D K Y A P I V A A F S S R G P S E - L E I N M L P L - L H F L L A D Q V K S N W R - I C S H C S C I F F S R T K - . . . . . . 27405 GCTAGTCCTGGAATCTTGAAACCTGACATAATCGGTCCTGGTGTTAATATCCTTGCTGCT A S P G I L K P D I I G P G V N I L A A L V L E S - N L T - S V L V L I S L L L S - S W N L E T - H N R S W C - Y P C C . . . . . . 27345 TGGCCTACCTCTATGGATGGCAACAAAAACACCAAATCCACATTCAATATTATATCAGGC W P T S M D G N K N T K S T F N I I S G G L P L W M A T K T P N P H S I L Y Q A L A Y L Y G W Q Q K H Q I H I Q Y Y I R . . . . . . 27285 ACCTCAATGTCTTGCCCTCACCTTAGTGGCGTAGCAGCTCTGCTGAAAAGCACACATCCT T S M S C P H L S G V A A L L K S T H P P Q C L A L T L V A - Q L C - K A H I L H L N V L P S P - W R S S S A E K H T S . . . . . . 27225 GATTGGTCTCCTGCTGCTATAAAGTCTGCAATCATGACAACCGCTGACACGTTAAACCTT D W S P A A I K S A I M T T A D T L N L I G L L L L - S L Q S - Q P L T R - T L - L V S C C Y K V C N H D N R - H V K P . . . . . . 27165 GCCAATAGTCCAATACTAGACGAAAGACTCCTTTTTGCTGACATCTATGCAATTGGTGCA A N S P I L D E R L L F A D I Y A I G A P I V Q Y - T K D S F L L T S M Q L V Q C Q - S N T R R K T P F C - H L C N W C . . . . . . 27105 GGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTAGTTTATGATACTCCATTTGAG G H V N P S R A N D P G L V Y D T P F E D M L I H R G Q M I Q D - F M I L H L R R T C - S I E G K - S R T S L - Y S I - . . . . . . 27045 GACTATGTAGCTTATTTGTGTGGTTTGAACTACACAAATCCACAGGTAAGTAAACTCTTA D Y V A Y L C G L N Y T N P Q V S K L L T M - L I C V V - T T Q I H R - V N S Y G L C S L F V W F E L H K S T G K - T L . . . . . . 26985 CAACGCAAAGTGAATTGCTGGGAGGTTGAAAGTATCCCTGAAGCACAATTAAACTATCCT Q R K V N C W E V E S I P E A Q L N Y P N A K - I A G R L K V S L K H N - T I L T T Q S E L L G G - K Y P - S T I K L S . . . . . . 26925 TCATTTTCCATATCCGGACTTGGATCAACTCCTCAGACATATACCAGAACAGTTACCAAC S F S I S G L G S T P Q T Y T R T V T N H F P Y P D L D Q L L R H I P E Q L P T F I F H I R T W I N S S D I Y Q N S Y Q . . . . . . 26865 GTTGGTGACGCCGAATCATCTTACAAAGTGGAGATAGCTTCACCAAAAGGTGTTGTCGTG V G D A E S S Y K V E I A S P K G V V V L V T P N H L T K W R - L H Q K V L S W R W - R R I I L Q S G D S F T K R C C R . . . . . . 26805 GAAGTTGAACCCTCCGAGCTGAATTTCTCCGAGTTGAACCAGAAGTTAACATACCAGGTA E V E P S E L N F S E L N Q K L T Y Q V K L N P P S - I S P S - T R S - H T R - G S - T L R A E F L R V E P E V N I P G . . . . . . 26745 ACGTTTTCCAAGACAATCAGCAGCTCACAGCCTGAGGTTGTTGAGGGATTCTTGAAGTGG T F S K T I S S S Q P E V V E G F L K W R F P R Q S A A H S L R L L R D S - S G N V F Q D N Q Q L T A - G C - G I L E V . . . 26685 AATTCTAATACGTACTCTGTG N S N T Y S V I L I R T L E F - Y V L C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-7_AGS-2_PPS_1 (27885 26665) (frame '1'; 1221 bp, 407 residues) 1 TLDRKIKATV NLGNRKKYEG ESTYRPKISS STFFTLYDAA KNASETPYCR PGSLTDPAVR 61 GKIVLCLQDD IVSNIEKGQA VKDAGGVGMI IINQPSYGAT KSADAHVLPA MDVSAADGTK 121 IISYMHSTSN PIARITFHGT VIGDKYAPIV AAFSSRGPSE ASPGILKPDI IGPGVNILAA 181 WPTSMDGNKN TKSTFNIISG TSMSCPHLSG VAALLKSTHP DWSPAAIKSA IMTTADTLNL 241 ANSPILDERL LFADIYAIGA GHVNPSRAND PGLVYDTPFE DYVAYLCGLN YTNPQVSKLL 301 QRKVNCWEVE SIPEAQLNYP SFSISGLGST PQTYTRTVTN VGDAESSYKV EIASPKGVVV 361 EVEPSELNFS ELNQKLTYQV TFSKTISSSQ PEVVEGFLKW NSNTYSV 3-phase translation of AGS-2 (+strand): . . . . . . 26665 CACAGAGTACGTATTAGAATTCCACTTCAAGAATCCCTCAACAACCTCAGGCTGTGAGCT H R V R I R I P L Q E S L N N L R L - A T E Y V L E F H F K N P S T T S G C E L Q S T Y - N S T S R I P Q Q P Q A V S . . . . . . 26725 GCTGATTGTCTTGGAAAACGTTACCTGGTATGTTAACTTCTGGTTCAACTCGGAGAAATT A D C L G K R Y L V C - L L V Q L G E I L I V L E N V T W Y V N F W F N S E K F C - L S W K T L P G M L T S G S T R R N . . . . . . 26785 CAGCTCGGAGGGTTCAACTTCCACGACAACACCTTTTGGTGAAGCTATCTCCACTTTGTA Q L G G F N F H D N T F W - S Y L H F V S S E G S T S T T T P F G E A I S T L - S A R R V Q L P R Q H L L V K L S P L C . . . . . . 26845 AGATGATTCGGCGTCACCAACGTTGGTAACTGTTCTGGTATATGTCTGAGGAGTTGATCC R - F G V T N V G N C S G I C L R S - S D D S A S P T L V T V L V Y V - G V D P K M I R R H Q R W - L F W Y M S E E L I . . . . . . 26905 AAGTCCGGATATGGAAAATGAAGGATAGTTTAATTGTGCTTCAGGGATACTTTCAACCTC K S G Y G K - R I V - L C F R D T F N L S P D M E N E G - F N C A S G I L S T S Q V R I W K M K D S L I V L Q G Y F Q P . . . . . . 26965 CCAGCAATTCACTTTGCGTTGTAAGAGTTTACTTACCTGTGGATTTGTGTAGTTCAAACC P A I H F A L - E F T Y L W I C V V Q T Q Q F T L R C K S L L T C G F V - F K P P S N S L C V V R V Y L P V D L C S S N . . . . . . 27025 ACACAAATAAGCTACATAGTCCTCAAATGGAGTATCATAAACTAGTCCTGGATCATTTGC T Q I S Y I V L K W S I I N - S W I I C H K - A T - S S N G V S - T S P G S F A H T N K L H S P Q M E Y H K L V L D H L . . . . . . 27085 CCTCGATGGATTAACATGTCCTGCACCAATTGCATAGATGTCAGCAAAAAGGAGTCTTTC P R W I N M S C T N C I D V S K K E S F L D G L T C P A P I A - M S A K R S L S P S M D - H V L H Q L H R C Q Q K G V F . . . . . . 27145 GTCTAGTATTGGACTATTGGCAAGGTTTAACGTGTCAGCGGTTGTCATGATTGCAGACTT V - Y W T I G K V - R V S G C H D C R L S S I G L L A R F N V S A V V M I A D F R L V L D Y W Q G L T C Q R L S - L Q T . . . . . . 27205 TATAGCAGCAGGAGACCAATCAGGATGTGTGCTTTTCAGCAGAGCTGCTACGCCACTAAG Y S S R R P I R M C A F Q Q S C Y A T K I A A G D Q S G C V L F S R A A T P L R L - Q Q E T N Q D V C F S A E L L R H - . . . . . . 27265 GTGAGGGCAAGACATTGAGGTGCCTGATATAATATTGAATGTGGATTTGGTGTTTTTGTT V R A R H - G A - Y N I E C G F G V F V - G Q D I E V P D I I L N V D L V F L L G E G K T L R C L I - Y - M W I W C F C . . . . . . 27325 GCCATCCATAGAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATTATGTCAGG A I H R G R P S S K D I N T R T D Y V R P S I E V G Q A A R I L T P G P I M S G C H P - R - A K Q Q G Y - H Q D R L C Q . . . . . . 27385 TTTCAAGATTCCAGGACTAGCTTCACTTGGTCCGCGAGAAGAAAATGCAGCTACAATGGG F Q D S R T S F T W S A R R K C S Y N G F K I P G L A S L G P R E E N A A T M G V S R F Q D - L H L V R E K K M Q L Q W . . . . . . 27445 AGCATATTTATCTCCAATTACTGTTCCATGGAATGTGATTCTAGCAATAGGGTTTGATGT S I F I S N Y C S M E C D S S N R V - C A Y L S P I T V P W N V I L A I G F D V E H I Y L Q L L F H G M - F - Q - G L M . . . . . . 27505 TGAGTGCATATAGGAAATGATTTTTGTTCCATCTGCAGCTGAAACATCCATTGCTGGAAG - V H I G N D F C S I C S - N I H C W K E C I - E M I F V P S A A E T S I A G R L S A Y R K - F L F H L Q L K H P L L E . . . . . . 27565 AACATGAGCATCAGCTGATTTAGTGGCACCGTAACTTGGCTGGTTGATGATAATCATGCC N M S I S - F S G T V T W L V D D N H A T - A S A D L V A P - L G W L M I I M P E H E H Q L I - W H R N L A G - - - S C . . . . . . 27625 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTTTCAATATTGGAAACAATATCATCTTG N T S S I L H S L S F F N I G N N I I L T P P A S F T A C P F S I L E T I S S C Q H L Q H P S Q L V L F Q Y W K Q Y H L . . . . . . 27685 TAGACATAATACTATCTTTCCTCTTACAGCAGGGTCAGTTAGTGATCCTGGTCTGCAATA - T - Y Y L S S Y S R V S - - S W S A I R H N T I F P L T A G S V S D P G L Q - V D I I L S F L L Q Q G Q L V I L V C N . . . . . . 27745 AGGAGTTTCACTTGCATTTTTTGCAGCATCATATAGAGTGAAGAATGTTGAGCTGGAAAT R S F T C I F C S I I - S E E C - A G N G V S L A F F A A S Y R V K N V E L E I K E F H L H F L Q H H I E - R M L S W K . . . . . . 27805 CTTTGGACGATAAGTTGATTCTCCTTCATATTTCTTTCTATTTCCGAGATTAACAGTAGC L W T I S - F S F I F L S I S E I N S S F G R - V D S P S Y F F L F P R L T V A S L D D K L I L L H I S F Y F R D - Q - . . . 27865 TTTTATCTTTCTATCAAGTGT F Y L S I K C F I F L S S L L S F Y Q V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-7_AGS-2_PPS_1 (27269 27517) (frame '2'; 246 bp, 82 residues) 1 GQDIEVPDII LNVDLVFLLP SIEVGQAARI LTPGPIMSGF KIPGLASLGP REENAATMGA 61 YLSPITVPWN VILAIGFDVE CI- >C08HBa0165B06.1+_PGL-7_AGS-2_PPS_2 (26874 27098) (frame '0'; 222 bp, 74 residues) 1 LFWYMSEELI QVRIWKMKDS LIVLQGYFQP PSNSLCVVRV YLPVDLCSSN HTNKLHSPQM 61 EYHKLVLDHL PSMD- PGL 8 (+ strand): 28079 28890 AGS-1 (28079 28890) SCR (e 0.882) Exon 1 28079 28890 ( 812 n); score: 0.882 PGS (28079 28854) SGN-E539488- PGS (28348 28890) SGN-E207645- PGS (28353 28880) SGN-E330205- PGS (28412 28876) SGN-E207387- PGS (28420 28853) SGN-E282403- 3-phase translation of AGS-1 (+strand): . . . . . . 28079 ATAGCTGAATCTATGGCAGCTAAAATATCACAGTCAGGACACTCGCCATCAGAATTGCAA I A E S M A A K I S Q S G H S P S E L Q - L N L W Q L K Y H S Q D T R H Q N C K S - I Y G S - N I T V R T L A I R I A . . . . . . 28139 ACCTTATATATGGCTAGGTGGGCAAGAGGGGCAACACCAACAGCAGTGCCATTAGCATTC T L Y M A R W A R G A T P T A V P L A F P Y I W L G G Q E G Q H Q Q Q C H - H S N L I Y G - V G K R G N T N S S A I S I . . . . . . 28199 CCAAATACATTAGCACCTTTTGCAAAGGCTCCTGCAGCTGTGCCTGCTGTGTGTGTACCA P N T L A P F A K A P A A V P A V C V P Q I H - H L L Q R L L Q L C L L C V Y H P K Y I S T F C K G S C S C A C C V C T . . . . . . 28259 TGTCCAGTATCATCTATCAAGGAACCGTTAGCAATTTGGTAAGACCTCGCTCCAATGAGC C P V S S I K E P L A I W - D L A P M S V Q Y H L S R N R - Q F G K T S L Q - A M S S I I Y Q G T V S N L V R P R S N E . . . . . . 28319 TTGTTGTTACACTTGGTTTTGAAATTAGACTCACAAACTCCTTTCCACTTAGCAGGCGGA L L L H L V L K L D S Q T P F H L A G G C C Y T W F - N - T H K L L S T - Q A E L V V T L G F E I R L T N S F P L S R R . . . . . . 28379 GGAGGCATCCCAAAGTCGCTAAATGAAGGATGGTCAGGATAAATTCCAGTGTCTATAACT G G I P K S L N E G W S G - I P V S I T E A S Q S R - M K D G Q D K F Q C L - L R R H P K V A K - R M V R I N S S V Y N . . . . . . 28439 CCGATGATCACGCCTTTCCCATAGTTGGAATCCTTCCACAAGCCCATGTTCTGTTGCAAA P M I T P F P - L E S F H K P M F C C K R - S R L S H S W N P S T S P C S V A N S D D H A F P I V G I L P Q A H V L L Q . . . . . . 28499 CCGAGAAAGTTCGGAGTATGAGTAGTATGCAAGGTGAAAATCCTCTGTTTCTGAGCAGAG P R K F G V - V V C K V K I L C F - A E R E S S E Y E - Y A R - K S S V S E Q R T E K V R S M S S M Q G E N P L F L S R . . . . . . 28559 ACAAAGCCGTGTTTATTCTCCATTTCCTTCACTTGTGCTGCTGTTAATCTTGCTGCAAAC T K P C L F S I S F T C A A V N L A A N Q S R V Y S P F P S L V L L L I L L Q T D K A V F I L H F L H L C C C - S C C K . . . . . . 28619 CCTTTCATCACATTGTGATAGGAATAGAGCATGCTAGCAGCCTCTTCATTTTCACTTGAG P F I T L - - E - S M L A A S S F S L E L S S H C D R N R A C - Q P L H F H L S P F H H I V I G I E H A S S L F I F T - . . . . . . 28679 CTGATTGTTGTAGTTTTAGGCAAAAAAGATAGATAATAGTTATCTAAATCCGTTACCGAT L I V V V L G K K D R - - L S K S V T D - L L - F - A K K I D N S Y L N P L P M A D C C S F R Q K R - I I V I - I R Y R . . . . . . 28739 GATTGTGTAGAAATTACGCTTTCAGGAGATTCAACATGGACTATATAAGTCTCGAGATCA D C V E I T L S G D S T W T I - V S R S I V - K L R F Q E I Q H G L Y K S R D H - L C R N Y A F R R F N M D Y I S L E I . . . . . . 28799 TTCTGAATAGTAGGCCTTGGGAAAGAACAAAAGATGAAAACAAGAAATATTTTCAAGAAT F - I V G L G K E Q K M K T R N I F K N S E - - A L G K N K R - K Q E I F S R I I L N S R P W E R T K D E N K K Y F Q E . . . . 28859 CCCATGGCTGCTAATACAAGAACTGATTATGT P M A A N T R T D Y P W L L I Q E L I M S H G C - Y K N - L C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-8_AGS-1_PPS_1 (28156 28404) (frame '0'; 246 bp, 82 residues) 1 VGKRGNTNSS AISIPKYIST FCKGSCSCAC CVCTMSSIIY QGTVSNLVRP RSNELVVTLG 61 FEIRLTNSFP LSRRRRHPKV AK- >C08HBa0165B06.1+_PGL-8_AGS-1_PPS_2 (28079 28300) (frame '1'; 219 bp, 73 residues) 1 IAESMAAKIS QSGHSPSELQ TLYMARWARG ATPTAVPLAF PNTLAPFAKA PAAVPAVCVP 61 CPVSSIKEPL AIW- >C08HBa0165B06.1+_PGL-8_AGS-1_PPS_3 (28405 28605) (frame '0'; 198 bp, 66 residues) 1 RMVRINSSVY NSDDHAFPIV GILPQAHVLL QTEKVRSMSS MQGENPLFLS RDKAVFILHF 61 LHLCCC- 3-phase translation of AGS-1 (-strand): . . . . . . 28890 ACATAATCAGTTCTTGTATTAGCAGCCATGGGATTCTTGAAAATATTTCTTGTTTTCATC T - S V L V L A A M G F L K I F L V F I H N Q F L Y - Q P W D S - K Y F L F S S I I S S C I S S H G I L E N I S C F H . . . . . . 28830 TTTTGTTCTTTCCCAAGGCCTACTATTCAGAATGATCTCGAGACTTATATAGTCCATGTT F C S F P R P T I Q N D L E T Y I V H V F V L S Q G L L F R M I S R L I - S M L L L F F P K A Y Y S E - S R D L Y S P C . . . . . . 28770 GAATCTCCTGAAAGCGTAATTTCTACACAATCATCGGTAACGGATTTAGATAACTATTAT E S P E S V I S T Q S S V T D L D N Y Y N L L K A - F L H N H R - R I - I T I I - I S - K R N F Y T I I G N G F R - L L . . . . . . 28710 CTATCTTTTTTGCCTAAAACTACAACAATCAGCTCAAGTGAAAATGAAGAGGCTGCTAGC L S F L P K T T T I S S S E N E E A A S Y L F C L K L Q Q S A Q V K M K R L L A S I F F A - N Y N N Q L K - K - R G C - . . . . . . 28650 ATGCTCTATTCCTATCACAATGTGATGAAAGGGTTTGCAGCAAGATTAACAGCAGCACAA M L Y S Y H N V M K G F A A R L T A A Q C S I P I T M - - K G L Q Q D - Q Q H K H A L F L S Q C D E R V C S K I N S S T . . . . . . 28590 GTGAAGGAAATGGAGAATAAACACGGCTTTGTCTCTGCTCAGAAACAGAGGATTTTCACC V K E M E N K H G F V S A Q K Q R I F T - R K W R I N T A L S L L R N R G F S P S E G N G E - T R L C L C S E T E D F H . . . . . . 28530 TTGCATACTACTCATACTCCGAACTTTCTCGGTTTGCAACAGAACATGGGCTTGTGGAAG L H T T H T P N F L G L Q Q N M G L W K C I L L I L R T F S V C N R T W A C G R L A Y Y S Y S E L S R F A T E H G L V E . . . . . . 28470 GATTCCAACTATGGGAAAGGCGTGATCATCGGAGTTATAGACACTGGAATTTATCCTGAC D S N Y G K G V I I G V I D T G I Y P D I P T M G K A - S S E L - T L E F I L T G F Q L W E R R D H R S Y R H W N L S - . . . . . . 28410 CATCCTTCATTTAGCGACTTTGGGATGCCTCCTCCGCCTGCTAAGTGGAAAGGAGTTTGT H P S F S D F G M P P P P A K W K G V C I L H L A T L G C L L R L L S G K E F V P S F I - R L W D A S S A C - V E R S L . . . . . . 28350 GAGTCTAATTTCAAAACCAAGTGTAACAACAAGCTCATTGGAGCGAGGTCTTACCAAATT E S N F K T K C N N K L I G A R S Y Q I S L I S K P S V T T S S L E R G L T K L - V - F Q N Q V - Q Q A H W S E V L P N . . . . . . 28290 GCTAACGGTTCCTTGATAGATGATACTGGACATGGTACACACACAGCAGGCACAGCTGCA A N G S L I D D T G H G T H T A G T A A L T V P - - M I L D M V H T Q Q A Q L Q C - R F L D R - Y W T W Y T H S R H S C . . . . . . 28230 GGAGCCTTTGCAAAAGGTGCTAATGTATTTGGGAATGCTAATGGCACTGCTGTTGGTGTT G A F A K G A N V F G N A N G T A V G V E P L Q K V L M Y L G M L M A L L L V L R S L C K R C - C I W E C - W H C C W C . . . . . . 28170 GCCCCTCTTGCCCACCTAGCCATATATAAGGTTTGCAATTCTGATGGCGAGTGTCCTGAC A P L A H L A I Y K V C N S D G E C P D P L L P T - P Y I R F A I L M A S V L T C P S C P P S H I - G L Q F - W R V S - . . . . 28110 TGTGATATTTTAGCTGCCATAGATTCAGCTAT C D I L A A I D S A V I F - L P - I Q L L - Y F S C H R F S Y Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-8_AGS-1_PPS_1 (28884 28081) (frame '1'; 804 bp, 268 residues) 1 SVLVLAAMGF LKIFLVFIFC SFPRPTIQND LETYIVHVES PESVISTQSS VTDLDNYYLS 61 FLPKTTTISS SENEEAASML YSYHNVMKGF AARLTAAQVK EMENKHGFVS AQKQRIFTLH 121 TTHTPNFLGL QQNMGLWKDS NYGKGVIIGV IDTGIYPDHP SFSDFGMPPP PAKWKGVCES 181 NFKTKCNNKL IGARSYQIAN GSLIDDTGHG THTAGTAAGA FAKGANVFGN ANGTAVGVAP 241 LAHLAIYKVC NSDGECPDCD ILAAIDSA PGL 9 (+ strand): 29767 45735 AGS-1 (29767 29787,30260 30754,31020 32620) SCR (e 0.857 d 0.000 a 0.000,e 0.848 d 0.293 a 0.000,e 0.805) Exon 1 29767 29787 ( 21 n); score: 0.857 Intron 1 29788 30259 ( 472 n); Pd: 0.000 Pa: 0.000 Exon 2 30260 30754 ( 495 n); score: 0.848 Intron 2 30755 31019 ( 265 n); Pd: 0.293 Pa: 0.000 Exon 3 31020 32620 (1601 n); score: 0.805 PGS (29767 29787,30260 30468) SGN-E376168+ PGS (30359 30744) SGN-E307529- PGS (30360 30754,31020 31295) SGN-E548357+ PGS (30360 30681) SGN-E237320+ PGS (31061 31831) SGN-E540271- PGS (31063 31424) SGN-E200689- PGS (31073 31562) SGN-E282432- PGS (31091 31584) SGN-E210009- PGS (31138 31643) SGN-E301429- PGS (31177 31831) SGN-E335107- PGS (31191 31743) SGN-E208913- PGS (31265 31842) SGN-E244401- PGS (31283 31842) SGN-E244422- PGS (31312 31743) SGN-E208810- PGS (31486 31950) SGN-E202140- PGS (31807 32582) SGN-E539488- PGS (32069 32620) SGN-E207645- PGS (32078 32609) SGN-E330205- PGS (32137 32602) SGN-E207387- PGS (32143 32581) SGN-E282403- 3-phase translation of AGS-1 (+strand): . . . : . . . 29767 TTCTTTTTTTTCTTTTTTTGA : TTTATTGTTTTAACAATGAAAAAAGTAACAGAACGTTTA F F F F F F - : F I V L T M K K V T E R L S F F S F F D : L L F - Q - K K - Q N V Y L F F L F L : I Y C F N N E K S N R T F . . . . . . 30299 TTGTGTAATCAAACAGCATTTTCAAATGTTTGAATACTTTGTGCACTTACTTAGCCAATG L C N Q T A F S N V - I L C A L T - P M C V I K Q H F Q M F E Y F V H L L S Q C I V - S N S I F K C L N T L C T Y L A N . . . . . . 30359 CCAACACAACTGCAATTGGACTTCTCACAGAGTGCCTGTTAGAATTCCACTTCAAGAATC P T Q L Q L D F S Q S A C - N S T S R I Q H N C N W T S H R V P V R I P L Q E S A N T T A I G L L T E C L L E F H F K N . . . . . . 30419 CCTCAACAACCCCAGACATTGAGCTGTTAATTGTCTTGGAAAATGTCACTTGGTATGTTA P Q Q P Q T L S C - L S W K M S L G M L L N N P R H - A V N C L G K C H L V C - P S T T P D I E L L I V L E N V T W Y V . . . . . . 30479 GCTTCTGGTTCAACTCCGAGAAATTTAGCTTGCTGGGCTTAACTTTCACGACAACGCCTT A S G S T P R N L A C W A - L S R Q R L L L V Q L R E I - L A G L N F H D N A F S F W F N S E K F S L L G L T F T T T P . . . . . . 30539 TAGGTGAAGCTATCTGCACCGTGTAAGATGATTTGGCATCACCAACATTGGTCACAGTTC - V K L S A P C K M I W H H Q H W S Q F R - S Y L H R V R - F G I T N I G H S S L G E A I C T V - D D L A S P T L V T V . . . . . . 30599 TGGTGTATGTCTGAGGAGTTGATCCAAGTCTCGATATGCAAAATGAAGGATAGTTTAATT W C M S E E L I Q V S I C K M K D S L I G V C L R S - S K S R Y A K - R I V - L L V Y V - G V D P S L D M Q N E G - F N . . . . . . 30659 GTGCTTCAGGGATACTTTCAACCTCCGAGCAATTCACCCTGCGTCGTAACAATTTACCTA V L Q G Y F Q P P S N S P C V V T I Y L C F R D T F N L R A I H P A S - Q F T Y C A S G I L S T S E Q F T L R R N N L P . . . . : . . 30719 CCTGTGGATTTGTGTAGTTCAAACCACATAAATAAG : GAATGTGGATTTGGTGTCCTTGTT P V D L C S S N H I N K : E C G F G V L V L W I C V V Q T T - I R : N V D L V S L L T C G F V - F K P H K - : G M W I W C P C . . . . . . 31044 GTCATCCACAGAAGTAGGCCAAGCAGCGAGGATATTAACACCAGGACCAATTATGTCAGG V I H R S R P S S E D I N T R T N Y V R S S T E V G Q A A R I L T P G P I M S G C H P Q K - A K Q R G Y - H Q D Q L C Q . . . . . . 31104 TTTCAAGATCCCAGGATTAGGTTTACTTGGTCCGCGAGAAGAAAATGCAGCAACTATTGG F Q D P R I R F T W S A R R K C S N Y W F K I P G L G L L G P R E E N A A T I G V S R S Q D - V Y L V R E K K M Q Q L L . . . . . . 31164 AGCATTTTTATCTCCAATTACTGTTCCTTGGATTGTGATTGTAGCAACAGGGTTCGATAT S I F I S N Y C S L D C D C S N R V R Y A F L S P I T V P W I V I V A T G F D I E H F Y L Q L L F L G L - L - Q Q G S I . . . . . . 31224 TGAGTTTGTATAGGCACGAATTTTGCTTCCATCTGCAGCTGAAACAACCAATGCTGGAAG - V C I G T N F A S I C S - N N Q C W K E F V - A R I L L P S A A E T T N A G R L S L Y R H E F C F H L Q L K Q P M L E . . . . . . 31284 AACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGACAATCATGCC N M S I S - F S D T I L - W V D D N H A T - A S A D L V T P Y C D G L M T I M P E H E H Q L I - - H H I V M G - - Q S C . . . . . . 31344 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCTACACCGCCGAATGC N T S S I L H S L S F I N I G Y T A E C T P P A S F T A C P L S T L A T P P N A Q H L Q H P S Q L V L Y Q H W L H R R M . . . . . . 31404 TAAACATAATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGACCCTCGTCTGCAATA - T - Y Y L S S Y S R V S E - P S S A I K H N T I F P L I A G S V S D P R L Q - L N I I L S F L L - Q G Q - V T L V C N . . . . . . 31464 AGGGGTTTCAGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAGAATGTTGA R G F R W I F C I F C S I K - S E E C - G V S D G S F A F F A A S N R V K N V E K G F Q M D L L H F L Q H Q I E - R M L . . . . . . 31524 GTTGGAAATCTTTGGACGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTTCCGAGCTT V G N L W T I S R F S F K F L S I S E L L E I F G R - A D S P S N S S P F P S L S W K S L D D K Q I L L Q I P L H F R A . . . . . . 31584 AGCAGTAGCTTTTATCTTTCTATCAAGCGTGCTGGCACCTACTGTAAGAATCCAAGGGGC S S S F Y L S I K R A G T Y C K N P R G A V A F I F L S S V L A P T V R I Q G A - Q - L L S F Y Q A C W H L L - E S K G . . . . . . 31644 TGAGTTATCTACTGAGGCAGGCGAAGGACCATTATTGCCTGCTGAGCAACTAACAAGAAT - V I Y - G R R R T I I A C - A T N K N E L S T E A G E G P L L P A E Q L T R M L S Y L L R Q A K D H Y C L L S N - Q E . . . . . . 31704 GCCTCTTTGTGTTGCACTGTACGCCCCGAGAGCAATACTTTCATCATAAAGAGGTCTCAG A S L C C T V R P E S N T F I I K R S Q P L C V A L Y A P R A I L S S - R G L R C L F V L H C T P R E Q Y F H H K E V S . . . . . . 31764 AGATCCACCAATGGATATAGAAAGAATATCTACTCCATCATCTATAGCTGAATCCATGGC R S T N G Y R K N I Y S I I Y S - I H G D P P M D I E R I S T P S S I A E S M A E I H Q W I - K E Y L L H H L - L N P W . . . . . . 31824 AGCTAAAATATCACTGTCAGAACAACCAACAGAGTTACACACCTTATATATGGCTATATG S - N I T V R T T N R V T H L I Y G Y M A K I S L S E Q P T E L H T L Y M A I W Q L K Y H C Q N N Q Q S Y T P Y I W L Y . . . . . . 31884 GGCAAGAGGAGCAACACCAACTGCAGTTCCATTAGCATTTTCATATACATTAGCACCTTT G K R S N T N C S S I S I F I Y I S T F A R G A T P T A V P L A F S Y T L A P F G Q E E Q H Q L Q F H - H F H I H - H L . . . . . . 31944 CACAAAAGCCCCCGCAGCTGTGCTTGCTGTGTGTGTACCATGTCCATCATCGTCTATCGG H K S P R S C A C C V C T M S I I V Y R T K A P A A V L A V C V P C P S S S I G S Q K P P Q L C L L C V Y H V H H R L S . . . . . . 32004 GGAACCATTGCCAAGTTTGTAAGACCTGGCTCCAATGAGCTTGTTGTTACACTTGTTGGT G T I A K F V R P G S N E L V V T L V G E P L P S L - D L A P M S L L L H L L V G N H C Q V C K T W L Q - A C C Y T C W . . . . . . 32064 GAAATTGGGCTCACAAACTCCTTTCCACTTAGCAGGCGGGGGAGGCATCCCAACATCGCT E I G L T N S F P L S R R G R H P N I A K L G S Q T P F H L A G G G G I P T S L - N W A H K L L S T - Q A G E A S Q H R . . . . . . 32124 AAATGAAGGATGATCAGGAAGAATTCCAGTGTCTAGAACTCCGATGATCACGCCTTCTCC K - R M I R K N S S V - N S D D H A F S N E G - S G R I P V S R T P M I T P S P - M K D D Q E E F Q C L E L R - S R L L . . . . . . 32184 AAAATTGGAATCTTTCCACAAGCCCATGTTCTGCTGCAAACCAAGAAAACTTGGAGTATG K I G I F P Q A H V L L Q T K K T W S M K L E S F H K P M F C C K P R K L G V - Q N W N L S T S P C S A A N Q E N L E Y . . . . . . 32244 AGTAGTGTGCAAAGACAAAATCCTCTGTTTCTGAGCAGAGACAAAGCCGTGTTTTTTCTC S S V Q R Q N P L F L S R D K A V F F L V V C K D K I L C F - A E T K P C F F S E - C A K T K S S V S E Q R Q S R V F S . . . . . . 32304 CATTTCCTTCACTTGTTCTGCAGTTAATCTTGCTGCAAACCCTGTCATCACATTGTGATA H F L H L F C S - S C C K P C H H I V I I S F T C S A V N L A A N P V I T L - - P F P S L V L Q L I L L Q T L S S H C D . . . . . . 32364 AGAATAGATCATTGTAGCAGCCTCTTCATTTCCACTAGAGCTAATTGCGGTAGTAGTTTT R I D H C S S L F I S T R A N C G S S F E - I I V A A S S F P L E L I A V V V L K N R S L - Q P L H F H - S - L R - - F . . . . . . 32424 AGGCAAAAAAGAAAGGTAATAGCTATCTAAATCCATTAACGATGATTGAGCAGTAATTAG R Q K R K V I A I - I H - R - L S S N - G K K E R - - L S K S I N D D - A V I R - A K K K G N S Y L N P L T M I E Q - L . . . . . . 32484 GCTTTCAGGGGATTCAACATGGACGATATAAGTCTCGAGATTACTCTGAATAGTAGGCCA A F R G F N M D D I S L E I T L N S R P L S G D S T W T I - V S R L L - I V G H G F Q G I Q H G R Y K S R D Y S E - - A . . . . . . 32544 TGGGAATGAACAAAAGATGAAAACAAAAAGGATTTTCAAGAATCCCATGGCTGCAAATAT W E - T K D E N K K D F Q E S H G C K Y G N E Q K M K T K R I F K N P M A A N I M G M N K R - K Q K G F S R I P W L Q I . . 32604 AAGAAGTGCTGATGTAT K K C - C R S A D V - E V L M Y Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-1_PPS_1 (30542 30754,31020 31226) (frame '1'; 417 bp, 139 residues) 1 VKLSAPCKMI WHHQHWSQFW CMSEELIQVS ICKMKDSLIV LQGYFQPPSN SPCVVTIYLP 61 VDLCSSNHIN KECGFGVLVV IHRSRPSSED INTRTNYVRF QDPRIRFTWS ARRKCSNYWS 121 IFISNYCSLD CDCSNRVRY- >C08HBa0165B06.1+_PGL-9_AGS-1_PPS_2 (31830 32129) (frame '1'; 297 bp, 99 residues) 1 NITVRTTNRV THLIYGYMGK RSNTNCSSIS IFIYISTFHK SPRSCACCVC TMSIIVYRGT 61 IAKFVRPGSN ELVVTLVGEI GLTNSFPLSR RGRHPNIAK- >C08HBa0165B06.1+_PGL-9_AGS-1_PPS_3 (30307 30564) (frame '0'; 255 bp, 85 residues) 1 SNSIFKCLNT LCTYLANANT TAIGLLTECL LEFHFKNPST TPDIELLIVL ENVTWYVSFW 61 FNSEKFSLLG LTFTTTPLGE AICTV- >C08HBa0165B06.1+_PGL-9_AGS-1_PPS_4 (31546 31752) (frame '2'; 204 bp, 68 residues) 1 ADSPSNSSPF PSLAVAFIFL SSVLAPTVRI QGAELSTEAG EGPLLPAEQL TRMPLCVALY 61 APRAILSS- AGS-2 (30384 31629,36473 36540) SCR (e 1.000 d 0.000 a 0.000,e 0.706) Exon 1 30384 31629 (1246 n); score: 1.000 Intron 1 31630 36472 (4843 n); Pd: 0.000 Pa: 0.000 Exon 2 36473 36540 ( 68 n); score: 0.706 PGS (30384 30957) SGN-E207413- PGS (30488 30930) SGN-E287935+ PGS (30594 31301) SGN-E213673- PGS (30614 31247) SGN-E213088- PGS (30718 31421) SGN-E212584- PGS (30746 31337) SGN-E329031- PGS (30769 31177) SGN-E317658- PGS (30832 31439) SGN-E308535- PGS (30900 31562) SGN-E397025- PGS (30994 31613) SGN-E306389- PGS (31558 31629,36473 36540) SGN-E288988- 3-phase translation of AGS-2 (+strand): . . . . . . 30384 CACAGAGTGCCTGTTAGAATTCCACTTCAAGAATCCCTCAACAACCCCAGACATTGAGCT H R V P V R I P L Q E S L N N P R H - A T E C L L E F H F K N P S T T P D I E L Q S A C - N S T S R I P Q Q P Q T L S . . . . . . 30444 GTTAATTGTCTTGGAAAATGTCACTTGGTATGTTAGCTTCTGGTTCAACTCCGAGAAATT V N C L G K C H L V C - L L V Q L R E I L I V L E N V T W Y V S F W F N S E K F C - L S W K M S L G M L A S G S T P R N . . . . . . 30504 TAGCTTGCTGGGCTTAACTTTCACGACAACGCCTTTAGGTGAAGCTATCTGCACCGTGTA - L A G L N F H D N A F R - S Y L H R V S L L G L T F T T T P L G E A I C T V - L A C W A - L S R Q R L - V K L S A P C . . . . . . 30564 AGATGATTTGGCATCACCAACATTGGTCACAGTTCTGGTGTATGTCTGAGGAGTTGATCC R - F G I T N I G H S S G V C L R S - S D D L A S P T L V T V L V Y V - G V D P K M I W H H Q H W S Q F W C M S E E L I . . . . . . 30624 AAGTCTCGATATGCAAAATGAAGGATAGTTTAATTGTGCTTCAGGGATACTTTCAACCTC K S R Y A K - R I V - L C F R D T F N L S L D M Q N E G - F N C A S G I L S T S Q V S I C K M K D S L I V L Q G Y F Q P . . . . . . 30684 CGAGCAATTCACCCTGCGTCGTAACAATTTACCTACCTGTGGATTTGTGTAGTTCAAACC R A I H P A S - Q F T Y L W I C V V Q T E Q F T L R R N N L P T C G F V - F K P P S N S P C V V T I Y L P V D L C S S N . . . . . . 30744 ACATAAATAAGGTACATAATCCTCAAATGGGGTATCATAAACTAGTCCTGGATCATTTGC T - I R Y I I L K W G I I N - S W I I C H K - G T - S S N G V S - T S P G S F A H I N K V H N P Q M G Y H K L V L D H L . . . . . . 30804 CCTCGATGGATTAACATGTCCTGCACCTATTGCATAGATATCAGCAGGACGGAGCCTTTG P R W I N M S C T Y C I D I S R T E P L L D G L T C P A P I A - I S A G R S L W P S M D - H V L H L L H R Y Q Q D G A F . . . . . . 30864 GTCGAGTATTGGACTACTGGCAAGGTTTAATGTGTCAGCGGTTGTCATCATTGCAGACTT V E Y W T T G K V - C V S G C H H C R L S S I G L L A R F N V S A V V I I A D L G R V L D Y W Q G L M C Q R L S S L Q T . . . . . . 30924 AATAACAGCAGGAGACCAATCAGGATGTGTTCTCTTCAGCAGAGCTGCTACCCCACTAAG N N S R R P I R M C S L Q Q S C Y P T K I T A G D Q S G C V L F S R A A T P L R - - Q Q E T N Q D V F S S A E L L P H - . . . . . . 30984 GTGTGGGCAAGACATCGAGGTGCCTGATATAATATTGAATGTGGATTTGGTGTCCTTGTT V W A R H R G A - Y N I E C G F G V L V C G Q D I E V P D I I L N V D L V S L L G V G K T S R C L I - Y - M W I W C P C . . . . . . 31044 GTCATCCACAGAAGTAGGCCAAGCAGCGAGGATATTAACACCAGGACCAATTATGTCAGG V I H R S R P S S E D I N T R T N Y V R S S T E V G Q A A R I L T P G P I M S G C H P Q K - A K Q R G Y - H Q D Q L C Q . . . . . . 31104 TTTCAAGATCCCAGGATTAGGTTTACTTGGTCCGCGAGAAGAAAATGCAGCAACTATTGG F Q D P R I R F T W S A R R K C S N Y W F K I P G L G L L G P R E E N A A T I G V S R S Q D - V Y L V R E K K M Q Q L L . . . . . . 31164 AGCATTTTTATCTCCAATTACTGTTCCTTGGATTGTGATTGTAGCAACAGGGTTCGATAT S I F I S N Y C S L D C D C S N R V R Y A F L S P I T V P W I V I V A T G F D I E H F Y L Q L L F L G L - L - Q Q G S I . . . . . . 31224 TGAGTTTGTATAGGCACGAATTTTGCTTCCATCTGCAGCTGAAACAACCAATGCTGGAAG - V C I G T N F A S I C S - N N Q C W K E F V - A R I L L P S A A E T T N A G R L S L Y R H E F C F H L Q L K Q P M L E . . . . . . 31284 AACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGACAATCATGCC N M S I S - F S D T I L - W V D D N H A T - A S A D L V T P Y C D G L M T I M P E H E H Q L I - - H H I V M G - - Q S C . . . . . . 31344 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCTACACCGCCGAATGC N T S S I L H S L S F I N I G Y T A E C T P P A S F T A C P L S T L A T P P N A Q H L Q H P S Q L V L Y Q H W L H R R M . . . . . . 31404 TAAACATAATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGACCCTCGTCTGCAATA - T - Y Y L S S Y S R V S E - P S S A I K H N T I F P L I A G S V S D P R L Q - L N I I L S F L L - Q G Q - V T L V C N . . . . . . 31464 AGGGGTTTCAGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAGAATGTTGA R G F R W I F C I F C S I K - S E E C - G V S D G S F A F F A A S N R V K N V E K G F Q M D L L H F L Q H Q I E - R M L . . . . . . 31524 GTTGGAAATCTTTGGACGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTTCCGAGCTT V G N L W T I S R F S F K F L S I S E L L E I F G R - A D S P S N S S P F P S L S W K S L D D K Q I L L Q I P L H F R A . . . . . : . 31584 AGCAGTAGCTTTTATCTTTCTATCAAGCGTGCTGGCACCTACTGTA : TATTATTATTATTA S S S F Y L S I K R A G T Y C : I L L L L A V A F I F L S S V L A P T V : Y Y Y Y Y - Q - L L S F Y Q A C W H L L Y : I I I I . . . . . . 36487 TTATTATGATATTGAGTCAAATCCATTCATACTTTTTATTCATTCAATTTCATT L L - Y - V K S I H T F Y S F N F I Y Y D I E S N P F I L F I H S I S I I M I L S Q I H S Y F L F I Q F H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-2_PPS_1 (30841 31236) (frame '2'; 393 bp, 131 residues) 1 ISAGRSLWSS IGLLARFNVS AVVIIADLIT AGDQSGCVLF SRAATPLRCG QDIEVPDIIL 61 NVDLVSLLSS TEVGQAARIL TPGPIMSGFK IPGLGLLGPR EENAATIGAF LSPITVPWIV 121 IVATGFDIEF V- >C08HBa0165B06.1+_PGL-9_AGS-2_PPS_2 (30542 30817) (frame '0'; 273 bp, 91 residues) 1 VKLSAPCKMI WHHQHWSQFW CMSEELIQVS ICKMKDSLIV LQGYFQPPSN SPCVVTIYLP 61 VDLCSSNHIN KVHNPQMGYH KLVLDHLPSM D- AGS-3 (31525 31545,33543 33556,34016 34072,34635 34798) SCR (e 0.714 d 0.000 a 0.794,e 0.786 d 0.995 a 0.000,e 0.781 d 0.000 a 0.000,e 0.942) Exon 1 31525 31545 ( 21 n); score: 0.714 Intron 1 31546 33542 (1997 n); Pd: 0.000 Pa: 0.794 Exon 2 33543 33556 ( 14 n); score: 0.786 Intron 2 33557 34015 ( 459 n); Pd: 0.995 Pa: 0.000 Exon 3 34016 34072 ( 57 n); score: 0.781 Intron 3 34073 34634 ( 562 n); Pd: 0.000 Pa: 0.000 Exon 4 34635 34798 ( 164 n); score: 0.942 PGS (31525 31545,33543 33556,34016 34072,34635 34798) SGN-E301194- PGS (34016 34072,34635 34798) SGN-E301078- 3-phase translation of AGS-3 (+strand): . . . : . : . . 31525 TTGGAAATCTTTGGACGATAA : GAGATAAGAAAGAG : ACATAGTTCAAAAAATAAATGAAAT L E I F G R - : E I R K R : H S S K N K - N W K S L D D K : R - E R : D I V Q K I N E M G N L W T I : R D K K E : T - F K K - M K . . . . : . . 34041 GTTGTGCGAAATTCGAGATAATACGAGAAAAT : ATATAAACGCGAAAAACAAGACAACAGA V V R N S R - Y E K I : Y K R E K Q D N R L C E I R D N T R K : Y I N A K N K T T D C C A K F E I I R E N : I - T R K T R Q Q . . . . . . 34663 TTTACGTGGTTCACCAATAAGTTGGCTACGTCCACGGAAAGAGGGGAGCAGTTTTATTAC F T W F T N K L A T S T E R G E Q F Y Y L R G S P I S W L R P R K E G S S F I T I Y V V H Q - V G Y V H G K R G A V L L . . . . . . 34723 GGAAAGGCAAAAACAGAATTACAGAATAGGGTTTGTCATAGCGTCTATATATAGTGCTAA G K A K T E L Q N R V C H S V Y I - C - E R Q K Q N Y R I G F V I A S I Y S A K R K G K N R I T E - G L S - R L Y I V L . . 34783 GCTACGCCCTAACAGG A T P - Q L R P N R S Y A L T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-3_PPS_1 (33550 33556,34016 34072,34635 34798) (frame '2'; 228 bp, 76 residues) 1 ERDIVQKINE MLCEIRDNTR KYINAKNKTT DLRGSPISWL RPRKEGSSFI TERQKQNYRI 61 GFVIASIYSA KLRPNR AGS-4 (36451 36488,38105 38167,38344 38357,42723 42729,43308 43709,43975 45554) SCR (e 0.737 d 0.000 a 0.000,e 0.722 d 0.900 a 0.982,e 0.643 d 0.000 a 0.000,e 0.714 d 0.796 a 0.873,e 0.816 d 0.000 a 0.000,e 0.804) Exon 1 36451 36488 ( 38 n); score: 0.737 Intron 1 36489 38104 (1616 n); Pd: 0.000 Pa: 0.000 Exon 2 38105 38167 ( 63 n); score: 0.722 Intron 2 38168 38343 ( 176 n); Pd: 0.900 Pa: 0.982 Exon 3 38344 38357 ( 14 n); score: 0.643 Intron 3 38358 42722 (4365 n); Pd: 0.000 Pa: 0.000 Exon 4 42723 42729 ( 7 n); score: 0.714 Intron 4 42730 43307 ( 578 n); Pd: 0.796 Pa: 0.873 Exon 5 43308 43709 ( 402 n); score: 0.816 Intron 5 43710 43974 ( 265 n); Pd: 0.000 Pa: 0.000 Exon 6 43975 45554 (1580 n); score: 0.804 PGS (36451 36488,38105 38167,38344 38357,42723 42729,43308 43423) SGN-E376168+ PGS (43308 43709,43975 44250) SGN-E548357+ PGS (43308 43636) SGN-E237320+ PGS (43316 43699) SGN-E307529- PGS (44016 44786) SGN-E540271- PGS (44018 44379) SGN-E200689- PGS (44028 44517) SGN-E282432- PGS (44048 44539) SGN-E210009- PGS (44093 44598) SGN-E301429- PGS (44132 44786) SGN-E335107- PGS (44146 44698) SGN-E208913- PGS (44208 44785) SGN-E286017- PGS (44220 44797) SGN-E244401- PGS (44238 44797) SGN-E244422- PGS (44267 44698) SGN-E208810- PGS (44441 44908) SGN-E202140- PGS (44762 45537) SGN-E539488- PGS (45027 45554) SGN-E207645- PGS (45036 45553) SGN-E330205- PGS (45095 45553) SGN-E207387- PGS (45103 45537) SGN-E282403- 3-phase translation of AGS-4 (+strand): . . . . : . . 36451 TTTTTATTATTATTATTATTATTATTATTATTATTATT : TTAATAATGTAAAAGTAACATA F L L L L L L L L L L L F : - - C K S N I F Y Y Y Y Y Y Y Y Y Y Y : F N N V K V T - F I I I I I I I I I I I : L I M - K - H . . . . . : . : 38127 AAATATATTGTGAAAACAAACAGCATTTTCACTACAATCAA : AGAAATTGAGCTCT : GATTT K Y I V K T N S I F T T I K : E I E L : - F N I L - K Q T A F S L Q S : K K L S S : D L K I Y C E N K Q H F H Y N Q : R N - A L : I . : . . . . . 42728 AG : CCAATGCAAACTCAACTGCAATTGGACTTCTCACAGAGTACTTGTTAGAATTCCACTT S : Q C K L N C N W T S H R V L V R I P L : A N A N S T A I G L L T E Y L L E F H F - : P M Q T Q L Q L D F S Q S T C - N S T . . . . . . 43366 CAAGAATCCCTCAAAGACCCCAGACTTTGAGCTGTTGGTTCTCTTGGAAAATGTCACTTG Q E S L K D P R L - A V G S L G K C H L K N P S K T P D F E L L V L L E N V T W S R I P Q R P Q T L S C W F S W K M S L . . . . . . 43426 GTATGTTAACTTCTGCTTCAACTCCGAGAAAATTAGCTTGCGGGGCTTAACTTTCACGAC V C - L L L Q L R E N - L A G L N F H D Y V N F C F N S E K I S L R G L T F T T G M L T S A S T P R K L A C G A - L S R . . . . . . 43486 AACGCCTTTAGGTGAAGCTATCTGCACCGTGTAAGATGATTTGGCATCACCAACATTGGT N A F R - S Y L H R V R - F G I T N I G T P L G E A I C T V - D D L A S P T L V Q R L - V K L S A P C K M I W H H Q H W . . . . . . 43546 CACAGTTCTTGTGAATGTCTGAGGAGTTGATCCAAGTCTCGATATGCAAAATGAAGGATA H S S C E C L R S - S K S R Y A K - R I T V L V N V - G V D P S L D M Q N E G - S Q F L - M S E E L I Q V S I C K M K D . . . . . . 43606 GTTTAATTGTGCTTCAGGGATACTTTCAACCTCCGAGCAATTTACTTTGCGTTTCAACAA V - L C F R D T F N L R A I Y F A F Q Q F N C A S G I L S T S E Q F T L R F N N S L I V L Q G Y F Q P P S N L L C V S T . . . . . : . 43666 TTTACCTACCTGTGAATTTGTGTAGTTCAAACCACACAAATAAG : GAATGTGGATTTGGTG F T Y L - I C V V Q T T Q I R : N V D L V L P T C E F V - F K P H K - : G M W I W C I Y L P V N L C S S N H T N K : E C G F G . . . . . . 43991 TTTTTGTTGCCATCCACGGAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATT F L L P S T E V G Q A A R I L T P G P I F C C H P R R - A K Q Q G Y - H Q D R L V F V A I H G G R P S S K D I N T R T D . . . . . . 44051 ATGTCAGGTTTCAAGATTCCACGACTAGCTGTATTTGGTCCCCGAGAAGAAAATGCAGCA M S G F K I P R L A V F G P R E E N A A C Q V S R F H D - L Y L V P E K K M Q Q Y V R F Q D S T T S C I W S P R R K C S . . . . . . 44111 ACTATTGGAGCATTTTTATCTCCAATTATTGTTCCTTGGAATGTGATTGTAGCAACAGGG T I G A F L S P I I V P W N V I V A T G L L E H F Y L Q L L F L G M - L - Q Q G N Y W S I F I S N Y C S L E C D C S N R . . . . . . 44171 TTTAATATTGAGTTTGTATAGGCGCGAATTTTTGTTCCATCTGCAGCTGAAACAACCAAT F N I E F V - A R I F V P S A A E T T N L I L S L Y R R E F L F H L Q L K Q P M V - Y - V C I G A N F C S I C S - N N Q . . . . . . 44231 GCTGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGACA A G R T - A S A D L V T P Y C D G L M T L E E H E H Q L I - - H H I V M G - - Q C W K N M S I S - F S D T I L - W V D D . . . . . . 44291 ATCATGCCAACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCAACACCG I M P T P P A S F T A C P L S T L A T P S C Q H L Q H P S Q L V L Y Q H W Q H R N H A N T S S I L H S L S F I N I G N T . . . . . . 44351 CCGAATGCTAAGCATAATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGACCCTCGT P N A K H N T I F P L I A G S V S D P R R M L S I I L S F L L - Q G Q - V T L V A E C - A - Y Y L S S Y S R V S E - P S . . . . . . 44411 CTGCAATAAGGTGTTTCGGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAG L Q - G V S D G S F A F F A A S N R V K C N K V F R M D L L H F L Q H Q I E - R S A I R C F G W I F C I F C S I K - S E . . . . . . 44471 AATGTTGCGTTTGAAGTCTTTGGATGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTT N V A F E V F G - - A D S P S N S S P F M L R L K S L D D K Q I L L Q I P L H F E C C V - S L W M I S R F S F K F L S I . . . . . . 44531 CCAAGCTTAACAGTAGCTTTTATCTTTCTATCAAGCGTGCTGGCACCTACTGTAAGAATC P S L T V A F I F L S S V L A P T V R I Q A - Q - L L S F Y Q A C W H L L - E S S K L N S S F Y L S I K R A G T Y C K N . . . . . . 44591 CAAGGGGCTGAGTTATCTACTGAGGCAGGTGATGGACCACTATTTCCGGCAGAACAACTA Q G A E L S T E A G D G P L F P A E Q L K G L S Y L L R Q V M D H Y F R Q N N - P R G - V I Y - G R - W T T I S G R T T . . . . . . 44651 ACAAGAATGCCTCTTTGTGTTGTACTGTACGCCCCGAGAGCAATAGTTTCATCATAAAGA T R M P L C V V L Y A P R A I V S S - R Q E C L F V L Y C T P R E Q - F H H K E N K N A S L C C T V R P E S N S F I I K . . . . . . 44711 GGGCTCAGAGATCCACCAAGGGAGATTGAAAGAATATCTACTCCATCATCTATAGCTGCA G L R D P P R E I E R I S T P S S I A A G S E I H Q G R L K E Y L L H H L - L H R A Q R S T K G D - K N I Y S I I Y S C . . . . . . 44771 TCCATGGCAGCTAAAATATCACTGCCAGGACACTTTCCATCGAAACCACATACCTTATAT S M A A K I S L P G H F P S K P H T L Y P W Q L K Y H C Q D T F H R N H I P Y I I H G S - N I T A R T L S I E T T Y L I . . . . . . 44831 ATGGCTATATGGGCAAGAGGAGCAACACCAACTGCAGTTCCATTAGCATTGCCATGTACA M A I W A R G A T P T A V P L A L P C T W L Y G Q E E Q H Q L Q F H - H C H V H Y G Y M G K R S N T N C S S I S I A M Y . . . . . . 44891 TTAGCACCTTTCACAAAAGCCCCCGCAGCTGTGCTTGCTGTGTGTGTACCATGTCCATCA L A P F T K A P A A V L A V C V P C P S - H L S Q K P P Q L C L L C V Y H V H H I S T F H K S P R S C A C C V C T M S I . . . . . . 44951 TTATCTATCGGGGAAGCATTGCCAAGTTCGTAAGACCTGGCTCCAATGAGCTTGTTGTTA L S I G E A L P S S - D L A P M S L L L Y L S G K H C Q V R K T W L Q - A C C Y I I Y R G S I A K F V R P G S N E L V V . . . . . . 45011 CACTTGTTGGTGAAATTGGACTTACAAACTCCTTTCCACTTAGCTGGCGGGGAAGGCATC H L L V K L D L Q T P F H L A G G E G I T C W - N W T Y K L L S T - L A G K A S T L V G E I G L T N S F P L S W R G R H . . . . . . 45071 CCAACGTCGCTAAAAGAAGGATGGTCAGGAATAATTCCAGTGTCTAGAACTCCGATGATC P T S L K E G W S G I I P V S R T P M I Q R R - K K D G Q E - F Q C L E L R - S P N V A K R R M V R N N S S V - N S D D . . . . . . 45131 ACGCCTTTCCCATAGTTGGAATCCTTCCATACACCCTTGTTCTGCTGCAAACCAAGAAAA T P F P - L E S F H T P L F C C K P R K R L S H S W N P S I H P C S A A N Q E N H A F P I V G I L P Y T L V L L Q T K K . . . . . . 45191 CTTGGAGTATGAGTAGTGTGCAAGGACAAAATCCTCTGTTTCTGAGCAGAGACAAAGCCG L G V - V V C K D K I L C F - A E T K P L E Y E - C A R T K S S V S E Q R Q S R T W S M S S V Q G Q N P L F L S R D K A . . . . . . 45251 TGTTTTTTCTCCATTTCCTTCACTTGTTCTGCAGTTAATCTTGCTGCAAACCCCGTCATC C F F S I S F T C S A V N L A A N P V I V F S P F P S L V L Q L I L L Q T P S S V F F L H F L H L F C S - S C C K P R H . . . . . . 45311 ACATTGTGATAGGAATAGATAATGCTGGCTGCCTCTTCATTTCCACTCGAACTAATTGCG T L - - E - I M L A A S S F P L E L I A H C D R N R - C W L P L H F H S N - L R H I V I G I D N A G C L F I S T R T N C . . . . . . 45371 GACATAGTTTCAGGCAAAAAGGAAAGGTAATAGCTCTCTAAATCCATGAACGACGATTGA D I V S G K K E R - - L S K S M N D D - T - F Q A K R K G N S S L N P - T T I E G H S F R Q K G K V I A L - I H E R R L . . . . . . 45431 GTAGTAATTAGGCTTTCAGGGGATTCAACATGGACTATATAAGTTTCGAAATCACTCTGA V V I R L S G D S T W T I - V S K S L - - - L G F Q G I Q H G L Y K F R N H S E S S N - A F R G F N M D Y I S F E I T L . . . . . . 45491 ATAGTAGGCCATGGGAAAGAACAAAAGATGAAAACAAAAAAGATTTTGAGGAATCCCATG I V G H G K E Q K M K T K K I L R N P M - - A M G K N K R - K Q K R F - G I P W N S R P W E R T K D E N K K D F E E S H . 45551 GCTG A L G Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-4_PPS_1 (43560 43709,43975 44175) (frame '0'; 348 bp, 116 residues) 1 MSEELIQVSI CKMKDSLIVL QGYFQPPSNL LCVSTIYLPV NLCSSNHTNK ECGFGVFVAI 61 HGGRPSSKDI NTRTDYVRFQ DSTTSCIWSP RRKCSNYWSI FISNYCSLEC DCSNRV- >C08HBa0165B06.1+_PGL-9_AGS-4_PPS_2 (44785 45117) (frame '0'; 330 bp, 110 residues) 1 NITARTLSIE TTYLIYGYMG KRSNTNCSSI SIAMYISTFH KSPRSCACCV CTMSIIIYRG 61 SIAKFVRPGS NELVVTLVGE IGLTNSFPLS WRGRHPNVAK RRMVRNNSSV - >C08HBa0165B06.1+_PGL-9_AGS-4_PPS_3 (38140 38167,38344 38357,42723 42729,43308 43519) (frame '2'; 258 bp, 86 residues) 1 KQTAFSLQSK KLSSDLANAN STAIGLLTEY LLEFHFKNPS KTPDFELLVL LENVTWYVNF 61 CFNSEKISLR GLTFTTTPLG EAICTV- >C08HBa0165B06.1+_PGL-9_AGS-4_PPS_4 (44501 44707) (frame '1'; 204 bp, 68 residues) 1 ADSPSNSSPF PSLTVAFIFL SSVLAPTVRI QGAELSTEAG DGPLFPAEQL TRMPLCVVLY 61 APRAIVSS- AGS-5 (38208 40469) SCR (e 0.900) Exon 1 38208 40469 (2262 n); score: 0.900 PGS (38208 38591) SGN-E307529- PGS (38231 38804) SGN-E207413- PGS (38335 38777) SGN-E287935+ PGS (38441 39147) SGN-E213673- PGS (38461 39092) SGN-E213088- PGS (38565 39268) SGN-E212584- PGS (38595 39184) SGN-E329031- PGS (38616 39024) SGN-E317658- PGS (38684 39284) SGN-E308535- PGS (38747 39409) SGN-E397025- PGS (38841 39460) SGN-E306389- PGS (38908 39678) SGN-E540271- PGS (38910 39271) SGN-E200689- PGS (38920 39409) SGN-E282432- PGS (38940 39431) SGN-E210009- PGS (38985 39490) SGN-E301429- PGS (39024 39678) SGN-E335107- PGS (39038 39587) SGN-E208913- PGS (39100 39677) SGN-E286017- PGS (39112 39689) SGN-E244401- PGS (39130 39689) SGN-E244422- PGS (39159 39587) SGN-E208810- PGS (39333 39800) SGN-E202140- PGS (39654 40432) SGN-E539488- PGS (39919 40469) SGN-E207645- PGS (39928 40444) SGN-E330205- PGS (39987 40454) SGN-E207387- PGS (39993 40429) SGN-E282403- 3-phase translation of AGS-5 (+strand): . . . . . . 38208 AACACAACTGCAATTGGACTTCTCACTGAGTGCCTATTAGAAGTCCATTTCAAGAATCCA N T T A I G L L T E C L L E V H F K N P T Q L Q L D F S L S A Y - K S I S R I H H N C N W T S H - V P I R S P F Q E S . . . . . . 38268 TCAACAATCACAAAGTTTGAGCTGTTGGTTCTTTTGGAAAATGTCACTTGGTATGTTAAC S T I T K F E L L V L L E N V T W Y V N Q Q S Q S L S C W F F W K M S L G M L T I N N H K V - A V G S F G K C H L V C - . . . . . . 38328 TTCTGGTTCAACTCAGAGAAATTGAGCTCTGTGGGCTTAACTTCCACGGCAACGCCTTTT F W F N S E K L S S V G L T S T A T P F S G S T Q R N - A L W A - L P R Q R L L L L V Q L R E I E L C G L N F H G N A F . . . . . . 38388 GGTGAAGCTACCTCCACTTTGTAAGATGATGTTGCGTCACCAACGTTGGTCACAGTTCTG G E A T S T L - D D V A S P T L V T V L V K L P P L C K M M L R H Q R W S Q F W W - S Y L H F V R - C C V T N V G H S S . . . . . . 38448 GTATATGTTTGAGGAGTTGATCCAAGTCTGAATATGGAAAATGAAGGATAGTTTAATTGT V Y V - G V D P S L N M E N E G - F N C Y M F E E L I Q V - I W K M K D S L I V G I C L R S - S K S E Y G K - R I V - L . . . . . . 38508 GCTTCAGGGATACTTTTCACCTTCAAACAATTCACCTGACGTTGTAACATTTTACCTACC A S G I L F T F K Q F T - R C N I L P T L Q G Y F S P S N N S P D V V T F Y L P C F R D T F H L Q T I H L T L - H F T Y . . . . . . 38568 TCTCGATTGGTATAGTTTAAACCACAAAAATAAGGTACATAGTCCTCAAATGGGGTATCA S R L V - F K P Q K - G T - S S N G V S L D W Y S L N H K N K V H S P Q M G Y H L S I G I V - T T K I R Y I V L K W G I . . . . . . 38628 TAAACTAGTCCTGGATCATTTGCCCTCGATGGATTAACATGTCCTGCACCAGTGGTAAAA - T S P G S F A L D G L T C P A P V V K K L V L D H L P S M D - H V L H Q W - K I N - S W I I C P R W I N M S C T S G K . . . . . . 38688 ATGTCAGCAGGAAGGAGCCTTTCGTCTAGTATTGGACTATTGGCAAGGTTTAACGTGTCA M S A G R S L S S S I G L L A R F N V S C Q Q E G A F R L V L D Y W Q G L T C Q N V S R K E P F V - Y W T I G K V - R V . . . . . . 38748 GCCGTTGTCATGATTGCAGACTTAATAACAGCAGGAGACCAATCAGGATGTGCGCTCTTC A V V M I A D L I T A G D Q S G C A L F P L S - L Q T - - Q Q E T N Q D V R S S S R C H D C R L N N S R R P I R M C A L . . . . . . 38808 AGCAGAGCTGCTACACCACTAAGGTGAGGGCAAGACATTGAGGTGCCTGATATAATATTG S R A A T P L R - G Q D I E V P D I I L A E L L H H - G E G K T L R C L I - Y - Q Q S C Y T T K V R A R H - G A - Y N I . . . . . . 38868 AATGTGGATTTGGTGTTTTTGTCGTCATCCACGGGTGTAGGCCAAGCAGCAAGGATGTTA N V D L V F L S S S T G V G Q A A R M L M W I W C F C R H P R V - A K Q Q G C - E C G F G V F V V I H G C R P S S K D V . . . . . . 38928 ACACCAGGACCGATTATGTCAGGTTTCAAGATTCCAGGACTAGCTCTACTTGGTCCCCGA T P G P I M S G F K I P G L A L L G P R H Q D R L C Q V S R F Q D - L Y L V P E N T R T D Y V R F Q D S R T S S T W S P . . . . . . 38988 GAAGAAAATGCAGCAACTATTGGAGCATTTTCATCTCCAATTGTTGTTCCTTGGAATGTG E E N A A T I G A F S S P I V V P W N V K K M Q Q L L E H F H L Q L L F L G M - R R K C S N Y W S I F I S N C C S L E C . . . . . . 39048 ATTGTAGCAACAGGGTTTAATATTGAGTTTGTATAGGCACGAATTCTTAATCCATCTGCA I V A T G F N I E F V - A R I L N P S A L - Q Q G L I L S L Y R H E F L I H L H D C S N R V - Y - V C I G T N S - S I C . . . . . . 39108 TCTGAAATATCCAATGCTGGAAGAACATGAGCATCAGCTGTTTTAGTGACACCATATTGT S E I S N A G R T - A S A V L V T P Y C L K Y P M L E E H E H Q L F - - H H I V I - N I Q C W K N M S I S C F S D T I L . . . . . . 39168 GATGTTTTGATGACAATCATGCCAACACCTCCAGCATCCTTCACAACTTTTCCTTTAGCA D V L M T I M P T P P A S F T T F P L A M F - - Q S C Q H L Q H P S Q L F L - Q - C F D D N H A N T S S I L H N F S F S . . . . . . 39228 ACACTGGAGACGCCACCGCCTGCTAGACATAATACTATCTTTCCTCTTATAACAGGGCCC T L E T P P P A R H N T I F P L I T G P H W R R H R L L D I I L S F L L - Q G P N T G D A T A C - T - Y Y L S S Y N R A . . . . . . 39288 TTGAGTGACCCTGGTTTGCAATAAGGGGTTTCCGATGGATCTTTTGCATGTTTTGCAGCA L S D P G L Q - G V S D G S F A C F A A - V T L V C N K G F P M D L L H V L Q H L E - P W F A I R G F R W I F C M F C S . . . . . . 39348 TCAAATAGAGTGAAGAATGTTGAGTTGGAAATCTGTGGACGATAAGCAGATTCTCCTTCG S N R V K N V E L E I C G R - A D S P S Q I E - R M L S W K S V D D K Q I L L R I K - S E E C - V G N L W T I S R F S F . . . . . . 39408 AATTCCTCTCCATTTCCAAGCTTAACAGTAGCTTTTATCTTTCTATCAAGCGTGCTGGCA N S S P F P S L T V A F I F L S S V L A I P L H F Q A - Q - L L S F Y Q A C W H E F L S I S K L N S S F Y L S I K R A G . . . . . . 39468 CCTACTGTAAGAATCCAAGGGGCTGCATTTCCAACTGAGGCAAGCAAAGGGCCTCTATTA P T V R I Q G A A F P T E A S K G P L L L L - E S K G L H F Q L R Q A K G L Y Y T Y C K N P R G C I S N - G K Q R A S I . . . . . . 39528 CCTGCAGAACAACTTACAAAAACACCTCTTGCCGTTGCACTGTATGCCCCAAGAGCAATA P A E Q L T K T P L A V A L Y A P R A I L Q N N L Q K H L L P L H C M P Q E Q - T C R T T Y K N T S C R C T V C P K S N . . . . . . 39588 GGGTCATCATAGAAAGAGTTGGGAGATCCACCAATGGATATAGAAAGAATATCTACTCCA G S S - K E L G D P P M D I E R I S T P G H H R K S W E I H Q W I - K E Y L L H R V I I E R V G R S T N G Y R K N I Y S . . . . . . 39648 TCATCTATAGCTGAATCCATGGCAGCTAAAATATCACTGTCAGAACAACCGCCATCAGAA S S I A E S M A A K I S L S E Q P P S E H L - L N P W Q L K Y H C Q N N R H Q N I I Y S - I H G S - N I T V R T T A I R . . . . . . 39708 CTACATACCTTATATACAGCTATGTGGGCAAGAGGGGCAACACCAACTGCAGTTCCATTA L H T L Y T A M W A R G A T P T A V P L Y I P Y I Q L C G Q E G Q H Q L Q F H - T T Y L I Y S Y V G K R G N T N C S S I . . . . . . 39768 GCATTGCCATATACATTAGCACCTTTCACAAAAGCTCCCGCAGCTGTGCTTGCTGTGTGT A L P Y T L A P F T K A P A A V L A V C H C H I H - H L S Q K L P Q L C L L C V S I A I Y I S T F H K S S R S C A C C V . . . . . . 39828 GTACCATGCCCATTACCATCTATCGGGGAACCATTGCCAAGATGGTAAGACCTCGCTCCT V P C P L P S I G E P L P R W - D L A P Y H A H Y H L S G N H C Q D G K T S L L C T M P I T I Y R G T I A K M V R P R S . . . . . . 39888 ATGAGCTTGTTGTTACACTTGTTGATGAAGTTGGACTCACAAACTCCTTTCCATTTAGCA M S L L L H L L M K L D S Q T P F H L A - A C C Y T C - - S W T H K L L S I - Q Y E L V V T L V D E V G L T N S F P F S . . . . . . 39948 GGCGGAGGAGGCATTCCAACATCACTAAACGAAGGATGGTCAGGAAGAATTCCAGTGTCT G G G G I P T S L N E G W S G R I P V S A E E A F Q H H - T K D G Q E E F Q C L R R R R H S N I T K R R M V R K N S S V . . . . . . 40008 ATAACTCCGATGATCACGCCTTCTCCATAGTTGGAATCCTTCCATACACCCATGTTCTGC I T P M I T P S P - L E S F H T P M F C - L R - S R L L H S W N P S I H P C S A Y N S D D H A F S I V G I L P Y T H V L . . . . . . 40068 TGCAAACCAAGAAAACTTGGAGTATGAGTAGTATCCAAGGACAAAATCCTCTGTTTCTGA C K P R K L G V - V V S K D K I L C F - A N Q E N L E Y E - Y P R T K S S V S E L Q T K K T W S M S S I Q G Q N P L F L . . . . . . 40128 GCGGAAACAAAGCCTCGTTTCTTCTCCATTTCCTTCACATGAGATTCTGTTAATCTTGCT A E T K P R F F S I S F T - D S V N L A R K Q S L V S S P F P S H E I L L I L L S G N K A S F L L H F L H M R F C - S C . . . . . . 40188 GCAAATCCTTTCATCACATTGTGATAGGAATAGATCATGGTAGCAGCCTCTTCATTTCCA A N P F I T L - - E - I M V A A S S F P Q I L S S H C D R N R S W - Q P L H F H C K S F H H I V I G I D H G S S L F I S . . . . . . 40248 CTCGAGCTAATTGCGGTAGTAGTTTTAGGCAAAAAAGAATGGTAATAGCTGTCTAGATCC L E L I A V V V L G K K E W - - L S R S S S - L R - - F - A K K N G N S C L D P T R A N C G S S F R Q K R M V I A V - I . . . . . . 40308 GTTAACGATGATTTAGTAGAAATCAGGCTTTCAGGGGATTCAACATGGACTATATAAATC V N D D L V E I R L S G D S T W T I - I L T M I - - K S G F Q G I Q H G L Y K S R - R - F S R N Q A F R G F N M D Y I N . . . . . . 40368 TCGAGACCACTCTGAATAGTCGGCCATGGGAAAGAACAAAAGATGAGAACAAGAAGGACT S R P L - I V G H G K E Q K M R T R R T R D H S E - S A M G K N K R - E Q E G L L E T T L N S R P W E R T K D E N K K D . . . . . 40428 TTGAAGAATCCCATGGCTGAAGCGATAATGTATTTGATGAAT L K N P M A E A I M Y L M N - R I P W L K R - C I - - F E E S H G - S D N V F D E Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-5_PPS_1 (39677 40180) (frame '0'; 501 bp, 167 residues) 1 NITVRTTAIR TTYLIYSYVG KRGNTNCSSI SIAIYISTFH KSSRSCACCV CTMPITIYRG 61 TIAKMVRPRS YELVVTLVDE VGLTNSFPFS RRRRHSNITK RRMVRKNSSV YNSDDHAFSI 121 VGILPYTHVL LQTKKTWSMS SIQGQNPLFL SGNKASFLLH FLHMRFC- >C08HBa0165B06.1+_PGL-9_AGS-5_PPS_2 (38835 39083) (frame '1'; 246 bp, 82 residues) 1 GQDIEVPDII LNVDLVFLSS STGVGQAARM LTPGPIMSGF KIPGLALLGP REENAATIGA 61 FSSPIVVPWN VIVATGFNIE FV- >C08HBa0165B06.1+_PGL-9_AGS-5_PPS_3 (39393 39599) (frame '1'; 204 bp, 68 residues) 1 ADSPSNSSPF PSLTVAFIFL SSVLAPTVRI QGAAFPTEAS KGPLLPAEQL TKTPLAVALY 61 APRAIGSS- >C08HBa0165B06.1+_PGL-9_AGS-5_PPS_5 (38208 38411) (frame '1'; 201 bp, 67 residues) 1 NTTAIGLLTE CLLEVHFKNP STITKFELLV LLENVTWYVN FWFNSEKLSS VGLTSTATPF 61 GEATSTL- >C08HBa0165B06.1+_PGL-9_AGS-5_PPS_4 (38631 38834) (frame '1'; 201 bp, 67 residues) 1 TSPGSFALDG LTCPAPVVKM SAGRSLSSSI GLLARFNVSA VVMIADLITA GDQSGCALFS 61 RAATPLR- 3-phase translation of AGS-5 (-strand): . . . . . . 40469 ATTCATCAAATACATTATCGCTTCAGCCATGGGATTCTTCAAAGTCCTTCTTGTTCTCAT I H Q I H Y R F S H G I L Q S P S C S H F I K Y I I A S A M G F F K V L L V L I S S N T L S L Q P W D S S K S F L F S . . . . . . 40409 CTTTTGTTCTTTCCCATGGCCGACTATTCAGAGTGGTCTCGAGATTTATATAGTCCATGT L L F F P M A D Y S E W S R D L Y S P C F C S F P W P T I Q S G L E I Y I V H V S F V L S H G R L F R V V S R F I - S M . . . . . . 40349 TGAATCCCCTGAAAGCCTGATTTCTACTAAATCATCGTTAACGGATCTAGACAGCTATTA - I P - K P D F Y - I I V N G S R Q L L E S P E S L I S T K S S L T D L D S Y Y L N P L K A - F L L N H R - R I - T A I . . . . . . 40289 CCATTCTTTTTTGCCTAAAACTACTACCGCAATTAGCTCGAGTGGAAATGAAGAGGCTGC P F F F A - N Y Y R N - L E W K - R G C H S F L P K T T T A I S S S G N E E A A T I L F C L K L L P Q L A R V E M K R L . . . . . . 40229 TACCATGATCTATTCCTATCACAATGTGATGAAAGGATTTGCAGCAAGATTAACAGAATC Y H D L F L S Q C D E R I C S K I N R I T M I Y S Y H N V M K G F A A R L T E S L P - S I P I T M - - K D L Q Q D - Q N . . . . . . 40169 TCATGTGAAGGAAATGGAGAAGAAACGAGGCTTTGTTTCCGCTCAGAAACAGAGGATTTT S C E G N G E E T R L C F R S E T E D F H V K E M E K K R G F V S A Q K Q R I L L M - R K W R R N E A L F P L R N R G F . . . . . . 40109 GTCCTTGGATACTACTCATACTCCAAGTTTTCTTGGTTTGCAGCAGAACATGGGTGTATG V L G Y Y S Y S K F S W F A A E H G C M S L D T T H T P S F L G L Q Q N M G V W C P W I L L I L Q V F L V C S R T W V Y . . . . . . 40049 GAAGGATTCCAACTATGGAGAAGGCGTGATCATCGGAGTTATAGACACTGGAATTCTTCC E G F Q L W R R R D H R S Y R H W N S S K D S N Y G E G V I I G V I D T G I L P G R I P T M E K A - S S E L - T L E F F . . . . . . 39989 TGACCATCCTTCGTTTAGTGATGTTGGAATGCCTCCTCCGCCTGCTAAATGGAAAGGAGT - P S F V - - C W N A S S A C - M E R S D H P S F S D V G M P P P P A K W K G V L T I L R L V M L E C L L R L L N G K E . . . . . . 39929 TTGTGAGTCCAACTTCATCAACAAGTGTAACAACAAGCTCATAGGAGCGAGGTCTTACCA L - V Q L H Q Q V - Q Q A H R S E V L P C E S N F I N K C N N K L I G A R S Y H F V S P T S S T S V T T S S - E R G L T . . . . . . 39869 TCTTGGCAATGGTTCCCCGATAGATGGTAATGGGCATGGTACACACACAGCAAGCACAGC S W Q W F P D R W - W A W Y T H S K H S L G N G S P I D G N G H G T H T A S T A I L A M V P R - M V M G M V H T Q Q A Q . . . . . . 39809 TGCGGGAGCTTTTGTGAAAGGTGCTAATGTATATGGCAATGCTAATGGAACTGCAGTTGG C G S F C E R C - C I W Q C - W N C S W A G A F V K G A N V Y G N A N G T A V G L R E L L - K V L M Y M A M L M E L Q L . . . . . . 39749 TGTTGCCCCTCTTGCCCACATAGCTGTATATAAGGTATGTAGTTCTGATGGCGGTTGTTC C C P S C P H S C I - G M - F - W R L F V A P L A H I A V Y K V C S S D G G C S V L P L L P T - L Y I R Y V V L M A V V . . . . . . 39689 TGACAGTGATATTTTAGCTGCCATGGATTCAGCTATAGATGATGGAGTAGATATTCTTTC - Q - Y F S C H G F S Y R - W S R Y S F D S D I L A A M D S A I D D G V D I L S L T V I F - L P W I Q L - M M E - I F F . . . . . . 39629 TATATCCATTGGTGGATCTCCCAACTCTTTCTATGATGACCCTATTGCTCTTGGGGCATA Y I H W W I S Q L F L - - P Y C S W G I I S I G G S P N S F Y D D P I A L G A Y L Y P L V D L P T L S M M T L L L L G H . . . . . . 39569 CAGTGCAACGGCAAGAGGTGTTTTTGTAAGTTGTTCTGCAGGTAATAGAGGCCCTTTGCT Q C N G K R C F C K L F C R - - R P F A S A T A R G V F V S C S A G N R G P L L T V Q R Q E V F L - V V L Q V I E A L C . . . . . . 39509 TGCCTCAGTTGGAAATGCAGCCCCTTGGATTCTTACAGTAGGTGCCAGCACGCTTGATAG C L S W K C S P L D S Y S R C Q H A - - A S V G N A A P W I L T V G A S T L D R L P Q L E M Q P L G F L Q - V P A R L I . . . . . . 39449 AAAGATAAAAGCTACTGTTAAGCTTGGAAATGGAGAGGAATTCGAAGGAGAATCTGCTTA K D K S Y C - A W K W R G I R R R I C L K I K A T V K L G N G E E F E G E S A Y E R - K L L L S L E M E R N S K E N L L . . . . . . 39389 TCGTCCACAGATTTCCAACTCAACATTCTTCACTCTATTTGATGCTGCAAAACATGCAAA S S T D F Q L N I L H S I - C C K T C K R P Q I S N S T F F T L F D A A K H A K I V H R F P T Q H S S L Y L M L Q N M Q . . . . . . 39329 AGATCCATCGGAAACCCCTTATTGCAAACCAGGGTCACTCAAGGGCCCTGTTATAAGAGG R S I G N P L L Q T R V T Q G P C Y K R D P S E T P Y C K P G S L K G P V I R G K I H R K P L I A N Q G H S R A L L - E . . . . . . 39269 AAAGATAGTATTATGTCTAGCAGGCGGTGGCGTCTCCAGTGTTGCTAAAGGAAAAGTTGT K D S I M S S R R W R L Q C C - R K S C K I V L C L A G G G V S S V A K G K V V E R - Y Y V - Q A V A S P V L L K E K L . . . . . . 39209 GAAGGATGCTGGAGGTGTTGGCATGATTGTCATCAAAACATCACAATATGGTGTCACTAA E G C W R C W H D C H Q N I T I W C H - K D A G G V G M I V I K T S Q Y G V T K - R M L E V L A - L S S K H H N M V S L . . . . . . 39149 AACAGCTGATGCTCATGTTCTTCCAGCATTGGATATTTCAGATGCAGATGGATTAAGAAT N S - C S C S S S I G Y F R C R W I K N T A D A H V L P A L D I S D A D G L R I K Q L M L M F F Q H W I F Q M Q M D - E . . . . . . 39089 TCGTGCCTATACAAACTCAATATTAAACCCTGTTGCTACAATCACATTCCAAGGAACAAC S C L Y K L N I K P C C Y N H I P R N N R A Y T N S I L N P V A T I T F Q G T T F V P I Q T Q Y - T L L L Q S H S K E Q . . . . . . 39029 AATTGGAGATGAAAATGCTCCAATAGTTGCTGCATTTTCTTCTCGGGGACCAAGTAGAGC N W R - K C S N S C C I F F S G T K - S I G D E N A P I V A A F S S R G P S R A Q L E M K M L Q - L L H F L L G D Q V E . . . . . . 38969 TAGTCCTGGAATCTTGAAACCTGACATAATCGGTCCTGGTGTTAACATCCTTGCTGCTTG - S W N L E T - H N R S W C - H P C C L S P G I L K P D I I G P G V N I L A A W L V L E S - N L T - S V L V L T S L L L . . . . . . 38909 GCCTACACCCGTGGATGACGACAAAAACACCAAATCCACATTCAATATTATATCAGGCAC A Y T R G - R Q K H Q I H I Q Y Y I R H P T P V D D D K N T K S T F N I I S G T G L H P W M T T K T P N P H S I L Y Q A . . . . . . 38849 CTCAATGTCTTGCCCTCACCTTAGTGGTGTAGCAGCTCTGCTGAAGAGCGCACATCCTGA L N V L P S P - W C S S S A E E R T S - S M S C P H L S G V A A L L K S A H P D P Q C L A L T L V V - Q L C - R A H I L . . . . . . 38789 TTGGTCTCCTGCTGTTATTAAGTCTGCAATCATGACAACGGCTGACACGTTAAACCTTGC L V S C C Y - V C N H D N G - H V K P C W S P A V I K S A I M T T A D T L N L A I G L L L L L S L Q S - Q R L T R - T L . . . . . . 38729 CAATAGTCCAATACTAGACGAAAGGCTCCTTCCTGCTGACATTTTTACCACTGGTGCAGG Q - S N T R R K A P S C - H F Y H W C R N S P I L D E R L L P A D I F T T G A G P I V Q Y - T K G S F L L T F L P L V Q . . . . . . 38669 ACATGTTAATCCATCGAGGGCAAATGATCCAGGACTAGTTTATGATACCCCATTTGAGGA T C - S I E G K - S R T S L - Y P I - G H V N P S R A N D P G L V Y D T P F E D D M L I H R G Q M I Q D - F M I P H L R . . . . . . 38609 CTATGTACCTTATTTTTGTGGTTTAAACTATACCAATCGAGAGGTAGGTAAAATGTTACA L C T L F L W F K L Y Q S R G R - N V T Y V P Y F C G L N Y T N R E V G K M L Q T M Y L I F V V - T I P I E R - V K C Y . . . . . . 38549 ACGTCAGGTGAATTGTTTGAAGGTGAAAAGTATCCCTGAAGCACAATTAAACTATCCTTC T S G E L F E G E K Y P - S T I K L S F R Q V N C L K V K S I P E A Q L N Y P S N V R - I V - R - K V S L K H N - T I L . . . . . . 38489 ATTTTCCATATTCAGACTTGGATCAACTCCTCAAACATATACCAGAACTGTGACCAACGT I F H I Q T W I N S S N I Y Q N C D Q R F S I F R L G S T P Q T Y T R T V T N V H F P Y S D L D Q L L K H I P E L - P T . . . . . . 38429 TGGTGACGCAACATCATCTTACAAAGTGGAGGTAGCTTCACCAAAAGGCGTTGCCGTGGA W - R N I I L Q S G G S F T K R R C R G G D A T S S Y K V E V A S P K G V A V E L V T Q H H L T K W R - L H Q K A L P W . . . . . . 38369 AGTTAAGCCCACAGAGCTCAATTTCTCTGAGTTGAACCAGAAGTTAACATACCAAGTGAC S - A H R A Q F L - V E P E V N I P S D V K P T E L N F S E L N Q K L T Y Q V T K L S P Q S S I S L S - T R S - H T K - . . . . . . 38309 ATTTTCCAAAAGAACCAACAGCTCAAACTTTGTGATTGTTGATGGATTCTTGAAATGGAC I F Q K N Q Q L K L C D C - W I L E M D F S K R T N S S N F V I V D G F L K W T H F P K E P T A Q T L - L L M D S - N G . . . . . 38249 TTCTAATAGGCACTCAGTGAGAAGTCCAATTGCAGTTGTGTT F - - A L S E K S N C S C V S N R H S V R S P I A V V L L I G T Q - E V Q L Q L C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-9_AGS-5_PPS_1 (40468 38210) (frame '2'; 2259 bp, 753 residues) 1 FIKYIIASAM GFFKVLLVLI FCSFPWPTIQ SGLEIYIVHV ESPESLISTK SSLTDLDSYY 61 HSFLPKTTTA ISSSGNEEAA TMIYSYHNVM KGFAARLTES HVKEMEKKRG FVSAQKQRIL 121 SLDTTHTPSF LGLQQNMGVW KDSNYGEGVI IGVIDTGILP DHPSFSDVGM PPPPAKWKGV 181 CESNFINKCN NKLIGARSYH LGNGSPIDGN GHGTHTASTA AGAFVKGANV YGNANGTAVG 241 VAPLAHIAVY KVCSSDGGCS DSDILAAMDS AIDDGVDILS ISIGGSPNSF YDDPIALGAY 301 SATARGVFVS CSAGNRGPLL ASVGNAAPWI LTVGASTLDR KIKATVKLGN GEEFEGESAY 361 RPQISNSTFF TLFDAAKHAK DPSETPYCKP GSLKGPVIRG KIVLCLAGGG VSSVAKGKVV 421 KDAGGVGMIV IKTSQYGVTK TADAHVLPAL DISDADGLRI RAYTNSILNP VATITFQGTT 481 IGDENAPIVA AFSSRGPSRA SPGILKPDII GPGVNILAAW PTPVDDDKNT KSTFNIISGT 541 SMSCPHLSGV AALLKSAHPD WSPAVIKSAI MTTADTLNLA NSPILDERLL PADIFTTGAG 601 HVNPSRANDP GLVYDTPFED YVPYFCGLNY TNREVGKMLQ RQVNCLKVKS IPEAQLNYPS 661 FSIFRLGSTP QTYTRTVTNV GDATSSYKVE VASPKGVAVE VKPTELNFSE LNQKLTYQVT 721 FSKRTNSSNF VIVDGFLKWT SNRHSVRSPI AVV AGS-6 (39405 39479,42163 42209) SCR (e 0.920 d 0.000 a 0.000,e 0.702) Exon 1 39405 39479 ( 75 n); score: 0.920 Intron 1 39480 42162 (2683 n); Pd: 0.000 Pa: 0.000 Exon 2 42163 42209 ( 47 n); score: 0.702 PGS (39405 39479,42163 42209) SGN-E288988- 3-phase translation of AGS-6 (+strand): . . . . . . 39405 TCGAATTCCTCTCCATTTCCAAGCTTAACAGTAGCTTTTATCTTTCTATCAAGCGTGCTG S N S S P F P S L T V A F I F L S S V L R I P L H F Q A - Q - L L S F Y Q A C W E F L S I S K L N S S F Y L S I K R A . . : . . . . 39465 GCACCTACTGTAAGA : TTTTTTTTTTTTTTTGGTCATCATATGAATAAGCTAAGCATCAAC A P T V R : F F F F F G H H M N K L S I N H L L - D : F F F F L V I I - I S - A S T G T Y C K : I F F F F W S S Y E - A K H Q . 42208 AA Q Maximal non-overlapping open reading frames (>= 64 codons): none AGS-7 (43339 44584,45712 45735) SCR (e 0.972 d 0.000 a 0.000,e 0.708) Exon 1 43339 44584 (1246 n); score: 0.972 Intron 1 44585 45711 (1127 n); Pd: 0.000 Pa: 0.000 Exon 2 45712 45735 ( 24 n); score: 0.708 PGS (43339 43912) SGN-E207413- PGS (43443 43885) SGN-E287935+ PGS (43549 44256) SGN-E213673- PGS (43569 44202) SGN-E213088- PGS (43673 44376) SGN-E212584- PGS (43703 44292) SGN-E329031- PGS (43724 44132) SGN-E317658- PGS (43787 44394) SGN-E308535- PGS (43855 44517) SGN-E397025- PGS (43949 44568) SGN-E306389- PGS (44513 44584,45712 45735) SGN-E288988- 3-phase translation of AGS-7 (+strand): . . . . . . 43339 CACAGAGTACTTGTTAGAATTCCACTTCAAGAATCCCTCAAAGACCCCAGACTTTGAGCT H R V L V R I P L Q E S L K D P R L - A T E Y L L E F H F K N P S K T P D F E L Q S T C - N S T S R I P Q R P Q T L S . . . . . . 43399 GTTGGTTCTCTTGGAAAATGTCACTTGGTATGTTAACTTCTGCTTCAACTCCGAGAAAAT V G S L G K C H L V C - L L L Q L R E N L V L L E N V T W Y V N F C F N S E K I C W F S W K M S L G M L T S A S T P R K . . . . . . 43459 TAGCTTGCGGGGCTTAACTTTCACGACAACGCCTTTAGGTGAAGCTATCTGCACCGTGTA - L A G L N F H D N A F R - S Y L H R V S L R G L T F T T T P L G E A I C T V - L A C G A - L S R Q R L - V K L S A P C . . . . . . 43519 AGATGATTTGGCATCACCAACATTGGTCACAGTTCTTGTGAATGTCTGAGGAGTTGATCC R - F G I T N I G H S S C E C L R S - S D D L A S P T L V T V L V N V - G V D P K M I W H H Q H W S Q F L - M S E E L I . . . . . . 43579 AAGTCTCGATATGCAAAATGAAGGATAGTTTAATTGTGCTTCAGGGATACTTTCAACCTC K S R Y A K - R I V - L C F R D T F N L S L D M Q N E G - F N C A S G I L S T S Q V S I C K M K D S L I V L Q G Y F Q P . . . . . . 43639 CGAGCAATTTACTTTGCGTTTCAACAATTTACCTACCTGTGAATTTGTGTAGTTCAAACC R A I Y F A F Q Q F T Y L - I C V V Q T E Q F T L R F N N L P T C E F V - F K P P S N L L C V S T I Y L P V N L C S S N . . . . . . 43699 ACACAAATAAGGTAGATAGTCCTCAAATGGGGTATCATAAACTAGTCCTGGGTCATTTGC T Q I R - I V L K W G I I N - S W V I C H K - G R - S S N G V S - T S P G S F A H T N K V D S P Q M G Y H K L V L G H L . . . . . . 43759 CCTTGATGGATTAACATGTCCTGCACCAATTGCATAGATATCAGCAGGACTGAGCCTTTC P - W I N M S C T N C I D I S R T E P F L D G L T C P A P I A - I S A G L S L S P L M D - H V L H Q L H R Y Q Q D - A F . . . . . . 43819 GTCGAGTATTGGACTACTGGCAAGGTTTAATGTGTCAGCGGTTGTCATGATTGCAGACTT V E Y W T T G K V - C V S G C H D C R L S S I G L L A R F N V S A V V M I A D L R R V L D Y W Q G L M C Q R L S - L Q T . . . . . . 43879 AATAACAGCAGGAGACCAATCAGGATGTGAGCTCTTCAGCAGAGCTGCTACGCCACTAAG N N S R R P I R M - A L Q Q S C Y A T K I T A G D Q S G C E L F S R A A T P L R - - Q Q E T N Q D V S S S A E L L R H - . . . . . . 43939 GTGAGGGCAAGACATTGAGGTGCCTGATATAATATTGAATGTGGATTTGGTGTTTTTGTT V R A R H - G A - Y N I E C G F G V F V - G Q D I E V P D I I L N V D L V F L L G E G K T L R C L I - Y - M W I W C F C . . . . . . 43999 GCCATCCACGGAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATTATGTCAGG A I H G G R P S S K D I N T R T D Y V R P S T E V G Q A A R I L T P G P I M S G C H P R R - A K Q Q G Y - H Q D R L C Q . . . . . . 44059 TTTCAAGATTCCACGACTAGCTGTATTTGGTCCCCGAGAAGAAAATGCAGCAACTATTGG F Q D S T T S C I W S P R R K C S N Y W F K I P R L A V F G P R E E N A A T I G V S R F H D - L Y L V P E K K M Q Q L L . . . . . . 44119 AGCATTTTTATCTCCAATTATTGTTCCTTGGAATGTGATTGTAGCAACAGGGTTTAATAT S I F I S N Y C S L E C D C S N R V - Y A F L S P I I V P W N V I V A T G F N I E H F Y L Q L L F L G M - L - Q Q G L I . . . . . . 44179 TGAGTTTGTATAGGCGCGAATTTTTGTTCCATCTGCAGCTGAAACAACCAATGCTGGAAG - V C I G A N F C S I C S - N N Q C W K E F V - A R I F V P S A A E T T N A G R L S L Y R R E F L F H L Q L K Q P M L E . . . . . . 44239 AACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGACAATCATGCC N M S I S - F S D T I L - W V D D N H A T - A S A D L V T P Y C D G L M T I M P E H E H Q L I - - H H I V M G - - Q S C . . . . . . 44299 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCAACACCGCCGAATGC N T S S I L H S L S F I N I G N T A E C T P P A S F T A C P L S T L A T P P N A Q H L Q H P S Q L V L Y Q H W Q H R R M . . . . . . 44359 TAAGCATAATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGACCCTCGTCTGCAATA - A - Y Y L S S Y S R V S E - P S S A I K H N T I F P L I A G S V S D P R L Q - L S I I L S F L L - Q G Q - V T L V C N . . . . . . 44419 AGGTGTTTCGGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAGAATGTTGC R C F G W I F C I F C S I K - S E E C C G V S D G S F A F F A A S N R V K N V A K V F R M D L L H F L Q H Q I E - R M L . . . . . . 44479 GTTTGAAGTCTTTGGATGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTTCCAAGCTT V - S L W M I S R F S F K F L S I S K L F E V F G - - A D S P S N S S P F P S L R L K S L D D K Q I L L Q I P L H F Q A . . . . . : . 44539 AACAGTAGCTTTTATCTTTCTATCAAGCGTGCTGGCACCTACTGTA : AATTTTTTTATTGT N S S F Y L S I K R A G T Y C : K F F Y C T V A F I F L S S V L A P T V : N F F I V - Q - L L S F Y Q A C W H L L - : I F L L . 45726 TTTTAGTTGT F - L F S C F L V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-9_AGS-7_PPS_1 (43943 44191) (frame '2'; 246 bp, 82 residues) 1 GQDIEVPDII LNVDLVFLLP STEVGQAARI LTPGPIMSGF KIPRLAVFGP REENAATIGA 61 FLSPIIVPWN VIVATGFNIE FV- >C08HBa0165B06.1+_PGL-9_AGS-7_PPS_2 (43560 43772) (frame '0'; 210 bp, 70 residues) 1 MSEELIQVSI CKMKDSLIVL QGYFQPPSNL LCVSTIYLPV NLCSSNHTNK VDSPQMGYHK 61 LVLGHLPLMD - PGL 10 (+ strand): 51306 51401 AGS-1 (51306 51401) SCR (e 0.927) Exon 1 51306 51401 ( 96 n); score: 0.927 PGS (51306 51401) SGN-E550939+ PGS (51306 51401) SGN-E255032+ PGS (51306 51401) SGN-E309959+ PGS (51306 51401) SGN-E259840+ 3-phase translation of AGS-1 (+strand): . . . . . . 51306 AGGTTGTTGCGCGTTCAAAATAATTGAACTTGGTGCTGCAACAGATTTGAGAGTAGGAAT R L L R V Q N N - T W C C N R F E S R N G C C A F K I I E L G A A T D L R V G I V V A R S K - L N L V L Q Q I - E - E . . . . 51366 CAATTATATTCCAACGGAATTTCTTTTAGATCCAAG Q L Y S N G I S F R S K N Y I P T E F L L D P S I I F Q R N F F - I Q Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 51401 CTTGGATCTAAAAGAAATTCCGTTGGAATATAATTGATTCCTACTCTCAAATCTGTTGCA L G S K R N S V G I - L I P T L K S V A L D L K E I P L E Y N - F L L S N L L Q W I - K K F R W N I I D S Y S Q I C C . . . . 51341 GCACCAAGTTCAATTATTTTGAACGCGCAACAACCT A P S S I I L N A Q Q P H Q V Q L F - T R N N S T K F N Y F E R A T T Maximal non-overlapping open reading frames (>= 64 codons): none PGL 11 (- strand): 55552 53641 AGS-1 (55552 55185,55136 55104,55065 55023,53675 53641) SCR (e 0.891 d 0.000 a 0.979,e 0.667 d 0.000 a 0.000,e 0.837 d 0.000 a 0.000,e 0.743) Exon 1 55552 55185 ( 368 n); score: 0.891 Intron 1 55184 55137 ( 48 n); Pd: 0.000 Pa: 0.979 Exon 2 55136 55104 ( 33 n); score: 0.667 Intron 2 55103 55066 ( 38 n); Pd: 0.000 Pa: 0.000 Exon 3 55065 55023 ( 43 n); score: 0.837 Intron 3 55022 53676 (1347 n); Pd: 0.000 Pa: 0.000 Exon 4 53675 53641 ( 35 n); score: 0.743 PGS (55552 55185,55136 55104,55065 55023,53675 53641) SGN-E542827+ 3-phase translation of AGS-1 (-strand): . . . . . . 55552 TTTGACTTTTTTTTGTTTCAATGACTAATTTATAATTATTCTTTTGATAATCAAATTTAT F D F F L F Q - L I Y N Y S F D N Q I Y L T F F C F N D - F I I I L L I I K F I - L F F V S M T N L - L F F - - S N L . . . . . . 55492 TTATGTTTCATTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAAT L C F I N I L V K L I V D D Q I F S S N Y V S L I F L - N L L - M T K F F L R I F M F H - Y S C K T Y C R - P N F F F E . . . . . . 55432 ACGAAATTAAATTACAAAACACACAAAAAAAATAGTTTAATTTTTTATTCTTTAAACTAA T K L N Y K T H K K N S L I F Y S L N - R N - I T K H T K K I V - F F I L - T K Y E I K L Q N T Q K K - F N F L F F K L . . . . . . 55372 GGAATGAAAGAAAAAGCAAAATAAGAATAAGAAATTCAAATAATTATAATAAAAGAAGTC G M K E K A K - E - E I Q I I I I K E V E - K K K Q N K N K K F K - L - - K K S R N E R K S K I R I R N S N N Y N K R S . . . . . . 55312 AAAAAATAATTTATGTATGAAAAAAATTAAAATATACTTTGAACTTTGATAGAAGAATCA K K - F M Y E K N - N I L - T L I E E S K N N L C M K K I K I Y F E L - - K N H Q K I I Y V - K K L K Y T L N F D R R I . . . . . . 55252 TATATACCCCTAAATTTTTTTTTAAAAAAAAATTAGAAGTAATAAATATAAATTTAAAAC Y I P L N F F L K K N - K - - I - I - N I Y P - I F F - K K I R S N K Y K F K T I Y T P K F F F K K K L E V I N I N L K . : . . . . : . 55192 TAATTTTT : GGGTATATGTGAGCCATTTGTATAACGGTATGG : CTCCAAATGACAAAGTTGA - F L : G I C E P F V - R Y G : S K - Q S - N F : W V Y V S H L Y N G M : A P N D K V E L I F : G Y M - A I C I T V W : L Q M T K L . . . : . . . 55046 GAGGTATATCAGACCTTTTTCCCT : AAAAGTAAATAAATATTATAAAAGTATATTTAAAA E V Y Q T F F P : K S K - I L - K Y I - R Y I R P F S L : K V N K Y Y K S I F K R G I S D L F P : - K - I N I I K V Y L K Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (53995 53826) SCR (e 0.899) Exon 1 53995 53826 ( 170 n); score: 0.899 PGS (53994 53826) SGN-E232152- PGS (53994 53826) SGN-E232652- PGS (53994 53890) SGN-E540577+ PGS (53994 53890) SGN-E291458+ PGS (53994 53890) SGN-E540574- PGS (53994 53893) SGN-E229341- PGS (53994 53898) SGN-E234153- PGS (53994 53898) SGN-E287237- PGS (53994 53899) SGN-E234088- PGS (53995 53904) SGN-E221650- PGS (53995 53904) SGN-E221883- PGS (53994 53904) SGN-E230184- PGS (53994 53904) SGN-E221489- PGS (53994 53904) SGN-E223641- PGS (53994 53907) SGN-E223115- PGS (53994 53924) SGN-E203169- 3-phase translation of AGS-2 (-strand): . . . . . . 53995 ATATATATATACTAGTTTTCGAAACGTGCGTTGCACGTTTGCCTTATACAATTATTATAA I Y I Y - F S K R A L H V C L I Q L L - Y I Y T S F R N V R C T F A L Y N Y Y K I Y I L V F E T C V A R L P Y T I I I . . . . . . 53935 AGTTGAATTATTATATAATGTTGAAATTAGAAATATTAGTTTTACCAATTTATATTTTAT S - I I I - C - N - K Y - F Y Q F I F Y V E L L Y N V E I R N I S F T N L Y F I K L N Y Y I M L K L E I L V L P I Y I L . . . . . 53875 TTATTAAATAAAATTCATAATAATCGAATAGTACATTGACCATCAAACAA L L N K I H N N R I V H - P S N Y - I K F I I I E - Y I D H Q T F I K - N S - - S N S T L T I K Q Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (+strand): . . . . . . 53826 TTGTTTGATGGTCAATGTACTATTCGATTATTATGAATTTTATTTAATAAATAAAATATA L F D G Q C T I R L L - I L F N K - N I C L M V N V L F D Y Y E F Y L I N K I - V - W S M Y Y S I I M N F I - - I K Y . . . . . . 53886 AATTGGTAAAACTAATATTTCTAATTTCAACATTATATAATAATTCAACTTTATAATAAT N W - N - Y F - F Q H Y I I I Q L Y N N I G K T N I S N F N I I - - F N F I I I K L V K L I F L I S T L Y N N S T L - - . . . . . 53946 TGTATAAGGCAAACGTGCAACGCACGTTTCGAAAACTAGTATATATATAT C I R Q T C N A R F E N - Y I Y V - G K R A T H V S K T S I Y I L Y K A N V Q R T F R K L V Y I Y Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (55464 55011) SCR (e 0.921) Exon 1 55464 55011 ( 454 n); score: 0.921 PGS (55464 55011) SGN-E243215+ PGS (55337 55015) SGN-E578389- 3-phase translation of AGS-3 (-strand): . . . . . . 55464 TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAAAACACACAAAA L L - M T K F F L R I R N - I T K H T K Y C R - P N F F F E Y E I K L Q N T Q K I V D D Q I F S S N T K L N Y K T H K . . . . . . 55404 AAAATAGTTTAATTTTTTATTCTTTAAACTAAGGAATGAAAGAAAAAGCAAAATAAGAAT K I V - F F I L - T K E - K K K Q N K N K - F N F L F F K L R N E R K S K I R I K N S L I F Y S L N - G M K E K A K - E . . . . . . 55344 AAGAAATTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATT K K F K - L - - K K S K N N L C M K K I R N S N N Y N K R S Q K I I Y V - K K L - E I Q I I I I K E V K K - F M Y E K N . . . . . . 55284 AAAATATACTTTGAACTTTGATAGAAGAATCATATATACCCCTAAATTTTTTTTTAAAAA K I Y F E L - - K N H I Y P - I F F - K K Y T L N F D R R I I Y T P K F F F K K - N I L - T L I E E S Y I P L N F F L K . . . . . . 55224 AAAATTAGAAGTAATAAATATAAATTTAAAACTAATTTTTTTAAATTCGTTAAATGAAGG K I R S N K Y K F K T N F F K F V K - R K L E V I N I N L K L I F L N S L N E G K N - K - - I - I - N - F F - I R - M K . . . . . . 55164 GTATATGTGAGCCATTTCGTAATGGCAGGGGTATATGTGAGCCATTTGTATAACGGTATG V Y V S H F V M A G V Y V S H L Y N G M Y M - A I S - W Q G Y M - A I C I T V W G I C E P F R N G R G I C E P F V - R Y . . . . . . 55104 GGCATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGA G I Y E P L L - R G V Y Q L Q M T K L R A Y M S H F Y N E G Y I S S K - Q S - E G H I - A T F I T R G I S A P N D K V E . . . . 55044 GGTATATCAGACCTTTTTCCCTTATTTCTAAAAT G I S D L F P L F L K V Y Q T F F P Y F - N R Y I R P F S L I S K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (+strand): . . . . . . 55011 ATTTTAGAAATAAGGGAAAAAGGTCTGATATACCTCTCAACTTTGTCATTTGGAGCTGAT I L E I R E K G L I Y L S T L S F G A D F - K - G K K V - Y T S Q L C H L E L I F R N K G K R S D I P L N F V I W S - . . . . . . 55071 ATACCCCTCGTTATAAAAGTGGCTCATATATGCCCATACCGTTATACAAATGGCTCACAT I P L V I K V A H I C P Y R Y T N G S H Y P S L - K W L I Y A H T V I Q M A H I Y T P R Y K S G S Y M P I P L Y K W L T . . . . . . 55131 ATACCCCTGCCATTACGAAATGGCTCACATATACCCTTCATTTAACGAATTTAAAAAAAT I P L P L R N G S H I P F I - R I - K N Y P C H Y E M A H I Y P S F N E F K K I Y T P A I T K W L T Y T L H L T N L K K . . . . . . 55191 TAGTTTTAAATTTATATTTATTACTTCTAATTTTTTTTTAAAAAAAAATTTAGGGGTATA - F - I Y I Y Y F - F F F K K K F R G I S F K F I F I T S N F F L K K N L G V Y L V L N L Y L L L L I F F - K K I - G Y . . . . . . 55251 TATGATTCTTCTATCAAAGTTCAAAGTATATTTTAATTTTTTTCATACATAAATTATTTT Y D S S I K V Q S I F - F F S Y I N Y F M I L L S K F K V Y F N F F H T - I I F I - F F Y Q S S K Y I L I F F I H K L F . . . . . . 55311 TTGACTTCTTTTATTATAATTATTTGAATTTCTTATTCTTATTTTGCTTTTTCTTTCATT L T S F I I I I - I S Y S Y F A F S F I - L L L L - L F E F L I L I L L F L S F F D F F Y Y N Y L N F L F L F C F F F H . . . . . . 55371 CCTTAGTTTAAAGAATAAAAAATTAAACTATTTTTTTTGTGTGTTTTGTAATTTAATTTC P - F K E - K I K L F F L C V L - F N F L S L K N K K L N Y F F C V F C N L I S S L V - R I K N - T I F F V C F V I - F . . . . 55431 GTATTCGAAGAAAAAATTTGGTCATCTACAATAA V F E E K I W S S T I Y S K K K F G H L Q - R I R R K N L V I Y N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-11_AGS-3_PPS_1 (55087 55302) (frame '2'; 213 bp, 71 residues) 1 KWLIYAHTVI QMAHIYPCHY EMAHIYPSFN EFKKISFKFI FITSNFFLKK NLGVYMILLS 61 KFKVYFNFFH T- PGL 12 (- strand): 57957 57474 AGS-1 (57957 57640,57508 57474) SCR (e 0.847 d 0.000 a 0.953,e 0.600) Exon 1 57957 57640 ( 318 n); score: 0.847 Intron 1 57639 57509 ( 131 n); Pd: 0.000 Pa: 0.953 Exon 2 57508 57474 ( 35 n); score: 0.600 PGS (57957 57640,57508 57474) SGN-E237320- 3-phase translation of AGS-1 (-strand): . . . . . . 57957 GGTGAAAAGTATCCTTGAAGCACAATTAAACTATCCTTCGTTTTCCATATTTGGACTTGG G E K Y P - S T I K L S F V F H I W T W V K S I L E A Q L N Y P S F S I F G L G - K V S L K H N - T I L R F P Y L D L . . . . . . 57897 ATCAACTCCTCAGACATATACCAGAACTGTAACCAATGTTGGTGATGCTACATCATCTTA I N S S D I Y Q N C N Q C W - C Y I I L S T P Q T Y T R T V T N V G D A T S S Y D Q L L R H I P E L - P M L V M L H H L . . . . . . 57837 CAAAGTGGAGGTAGCTTCACCAGAAGGCGTTGCCATCGAAGTTGAACCCTCCGAGCTAAA Q S G G S F T R R R C H R S - T L R A K K V E V A S P E G V A I E V E P S E L N T K W R - L H Q K A L P S K L N P P S - . . . . . . 57777 TTTCTCCGAGTTGAACCAGAAGTTGACATACCAAGTGACATTTTCCAAGACAACTAATAG F L R V E P E V D I P S D I F Q D N - - F S E L N Q K L T Y Q V T F S K T T N S I S P S - T R S - H T K - H F P R Q L I . . . . . . 57717 CTCAAACCCTGAGGTTATTGAGGGATTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAG L K P - G Y - G I L E V D F - - A L S E S N P E V I E G F L K W T S N R H S V R A Q T L R L L R D S - S G L L I G T Q - . . : . . . . 57657 AAGTCCAATTGCAGTTGT : TTGTTTGAAGAATGCAAAAGCATATCCTCTTTGAT K S N C S C : L F E E C K S I S S L S P I A V V : C L K N A K A Y P L - E V Q L Q L : F V - R M Q K H I L F D Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-12_AGS-1_PPS_1 (57956 57640,57508 57475) (frame '2'; 348 bp, 116 residues) 1 VKSILEAQLN YPSFSIFGLG STPQTYTRTV TNVGDATSSY KVEVASPEGV AIEVEPSELN 61 FSELNQKLTY QVTFSKTTNS SNPEVIEGFL KWTSNRHSVR SPIAVVCLKN AKAYPL- PGL 13 (+ strand): 57583 66058 AGS-1 (57583 58030,58296 59897) SCR (e 0.873 d 0.855 a 0.000,e 0.800) Exon 1 57583 58030 ( 448 n); score: 0.873 Intron 1 58031 58295 ( 265 n); Pd: 0.855 Pa: 0.000 Exon 2 58296 59897 (1602 n); score: 0.800 PGS (57583 57705) SGN-E353214- PGS (57619 58020) SGN-E307529- PGS (57635 58030,58296 58571) SGN-E548357+ PGS (58337 59107) SGN-E540271- PGS (58339 58700) SGN-E200689- PGS (58349 58838) SGN-E282432- PGS (58369 58860) SGN-E210009- PGS (58453 59107) SGN-E335107- PGS (58467 59016) SGN-E208913- PGS (58531 59106) SGN-E286017- PGS (58541 59118) SGN-E244401- PGS (58559 59118) SGN-E244422- PGS (58762 59225) SGN-E202140- PGS (58834 58901) SGN-E288988- PGS (59083 59858) SGN-E539488- PGS (59345 59897) SGN-E207645- PGS (59354 59886) SGN-E330205- PGS (59413 59881) SGN-E207387- PGS (59421 59857) SGN-E282403- 3-phase translation of AGS-1 (+strand): . . . . . . 57583 TTTTCAAATGTCCGAGTACTTAATGCACTTATATAGCCAATTTTTGACTAGGCAGACACA F S N V R V L N A L I - P I F D - A D T F Q M S E Y L M H L Y S Q F L T R Q T Q F K C P S T - C T Y I A N F - L G R H . . . . . . 57643 ACTGCAATTGGACTTCTCACTGAGTGCCTATTAGAAGTCCACTTCAAGAATCCCTCAATA T A I G L L T E C L L E V H F K N P S I L Q L D F S L S A Y - K S T S R I P Q - N C N W T S H - V P I R S P L Q E S L N . . . . . . 57703 ACCTCAGGGTTTGAGCTATTAGTTGTCTTGGAAAATGTCACTTGGTATGTCAACTTCTGG T S G F E L L V V L E N V T W Y V N F W P Q G L S Y - L S W K M S L G M S T S G N L R V - A I S C L G K C H L V C Q L L . . . . . . 57763 TTCAACTCGGAGAAATTTAGCTCGGAGGGTTCAACTTCGATGGCAACGCCTTCTGGTGAA F N S E K F S S E G S T S M A T P S G E S T R R N L A R R V Q L R W Q R L L V K V Q L G E I - L G G F N F D G N A F W - . . . . . . 57823 GCTACCTCCACTTTGTAAGATGATGTAGCATCACCAACATTGGTTACAGTTCTGGTATAT A T S T L - D D V A S P T L V T V L V Y L P P L C K M M - H H Q H W L Q F W Y M S Y L H F V R - C S I T N I G Y S S G I . . . . . . 57883 GTCTGAGGAGTTGATCCAAGTCCAAATATGGAAAACGAAGGATAGTTTAATTGTGCTTCA V - G V D P S P N M E N E G - F N C A S S E E L I Q V Q I W K T K D S L I V L Q C L R S - S K S K Y G K R R I V - L C F . . . . . . 57943 AGGATACTTTTCACCTCCGAGCAATTCACCCTGCGTTGTATCAGGTTACCTACCTGTTGA R I L F T S E Q F T L R C I R L P T C - G Y F S P P S N S P C V V S G Y L P V D K D T F H L R A I H P A L Y Q V T Y L L . . . : . . . 58003 TCTGTGTACTTCAAACCACATAAATAAG : GAATGTGGATTTGGTGTTCTTGTTGTCATCCA S V Y F K P H K - : G M W I W C S C C H P L C T S N H I N K : E C G F G V L V V I H I C V L Q T T - I R : N V D L V F L L S S . . . . . . 58328 CGGAGGTAGGCCAAGCAGCAAGGATATTAGCACCAGGACCGATTATGTCAGGCTTCAAGA R R - A K Q Q G Y - H Q D R L C Q A S R G G R P S S K D I S T R T D Y V R L Q D T E V G Q A A R I L A P G P I M S G F K . . . . . . 58388 TTCCAGGACTAGCTCTACTTGGTCCTCTTGAGGAAAATGCAGCAACCATAGGAGCATTTT F Q D - L Y L V L L R K M Q Q P - E H F S R T S S T W S S - G K C S N H R S I F I P G L A L L G P L E E N A A T I G A F . . . . . . 58448 TGTCTCCAATTATTGTTCCTTGGAATGCAATTGTAGCAACAGGGCTTGATGTTGAGTTCA C L Q L L F L G M Q L - Q Q G L M L S S V S N Y C S L E C N C S N R A - C - V H L S P I I V P W N A I V A T G L D V E F . . . . . . 58508 TGTAAGCAAGAATTTTTGTTCCGTCTGCAGCTGAAACAACCAATGCTGGAAGAACATGAG C K Q E F L F R L Q L K Q P M L E E H E V S K N F C S V C S - N N Q C W K N M S M - A R I F V P S A A E T T N A G R T - . . . . . . 58568 CATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGATAATCATGCCAACACCTC H Q L I - - H H I V M G - - - S C Q H L I S - F S D T I L - W V D D N H A N T S A S A D L V T P Y C D G L M I I M P T P . . . . . . 58628 CAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCTACATGGCCGAGTGCTGAACATA Q H P S Q L V L Y Q H W L H G R V L N I S I L H S L S F I N I G Y M A E C - T - P A S F T A C P L S T L A T W P S A E H . . . . . . 58688 ATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGAACCTCGTCTGCAATAAGGGGTTT I L S F L L - Q G Q - V N L V C N K G F Y Y L S S Y S R V S E - T S S A I R G F N T I F P L I A G S V S E P R L Q - G V . . . . . . 58748 CGGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAGAATGTTGCGTTGGAAA R M D L L H F L Q H Q I E - R M L R W K G W I F C I F C S I K - S E E C C V G N S D G S F A F F A A S N R V K N V A L E . . . . . . 58808 TCTTTGGACGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTTCCAAGCTTAACAGTAG S L D D K Q I L L Q I P L H F Q A - Q - L W T I S R F S F K F L S I S K L N S S I F G R - A D S P S N S S P F P S L T V . . . . . . 58868 CTTTTATCTTTCTGTCAAGCGTGCTGGCACCTACCGTAAGAATCCAAGGGGCGGTGTTTA L L S F C Q A C W H L P - E S K G R C L F Y L S V K R A G T Y R K N P R G G V Y A F I F L S S V L A P T V R I Q G A V F . . . . . . 58928 CTGCTGTGATAAAGGATGGACCACTATTTCCAGCAGAACAACTTACAAGAATTCCTCTTT L L - - R M D H Y F Q Q N N L Q E F L F C C D K G W T T I S S R T T Y K N S S F T A V I K D G P L F P A E Q L T R I P L . . . . . . 58988 CCGTTGCACTGTACGCCCCGATAGCAATATTGTCTCTATGGAAAGGGATTGGACCTCCAC P L H C T P R - Q Y C L Y G K G L D L H R C T V R P D S N I V S M E R D W T S T S V A L Y A P I A I L S L W K G I G P P . . . . . . 59048 TAAGGGACATTGAAAGAATATCTACTCCATCATCTATAGCTGAATCCATGGCAGCTAAAA - G T L K E Y L L H H L - L N P W Q L K K G H - K N I Y S I I Y S - I H G S - N L R D I E R I S T P S S I A E S M A A K . . . . . . 59108 CATCACTTTCAGAACAACCAACAGAATTACACACCTTATATATGGCTATATGGGCTAGAG H H F Q N N Q Q N Y T P Y I W L Y G L E I T F R T T N R I T H L I Y G Y M G - R T S L S E Q P T E L H T L Y M A I W A R . . . . . . 59168 GAGCAACACCAACTGCAGTTCCATCAGCATTGCCATATACATTAGCACCTTTCACAAAGG E Q H Q L Q F H Q H C H I H - H L S Q R S N T N C S S I S I A I Y I S T F H K G G A T P T A V P S A L P Y T L A P F T K . . . . . . 59228 CTCCTGCAGCTGTGCTTGCTGTGTGTGTACCATGTCCAATACTATCTATCGGGGAACCAT L L Q L C L L C V Y H V Q Y Y L S G N H S C S C A C C V C T M S N T I Y R G T I A P A A V L A V C V P C P I L S I G E P . . . . . . 59288 TACCAAGTTGGTAAGACCTGGCTCCAATGAGCTTGTTGTTACACTTATTGGTGAAATTGG Y Q V G K T W L Q - A C C Y T Y W - N W T K L V R P G S N E L V V T L I G E I G L P S W - D L A P M S L L L H L L V K L . . . . . . 59348 ACTCACAAACTCCTTTCCACTTAGCAGGCGGGGGAGGCATCCCAACATCGCTAAAAGAAG T H K L L S T - Q A G E A S Q H R - K K L T N S F P L S R R G R H P N I A K R R D S Q T P F H L A G G G G I P T S L K E . . . . . . 59408 GATGGTCAGGAATAATTCCAGTGTCTATAACTCCGATGATCACGCCTTTCCCATAGTTGG D G Q E - F Q C L - L R - S R L S H S W M V R N N S S V Y N S D D H A F P I V G G W S G I I P V S I T P M I T P F P - L . . . . . . 59468 AATCCTTCCATACACCCATGTTCTGCTGCAAACCAAGAAAACTTGGAGTATGAGTAGTGT N P S I H P C S A A N Q E N L E Y E - C I L P Y T H V L L Q T K K T W S M S S V E S F H T P M F C C K P R K L G V - V V . . . . . . 59528 GCAAAGACAAAATCCTCTGTTTCTGAGCAGAGACAAAGCCGTGTTTTTTCTCCATTTCCT A K T K S S V S E Q R Q S R V F S P F P Q R Q N P L F L S R D K A V F F L H F L C K D K I L C F - A E T K P C F F S I S . . . . . . 59588 TCACTTGTTCTGCAGTTAATCTTGCTGCAAACCCTGTCATCACATTGTGATAGGAATAGA S L V L Q L I L L Q T L S S H C D R N R H L F C S - S C C K P C H H I V I G I D F T C S A V N L A A N P V I T L - - E - . . . . . . 59648 TCATGGTAGCAGCCTCTTCATTTCCACTCGAACTAATTGTGGTAGCAGTTTTAGGCAAAA S W - Q P L H F H S N - L W - Q F - A K H G S S L F I S T R T N C G S S F R Q K I M V A A S S F P L E L I V V A V L G K . . . . . . 59708 AAGAAAGGTAATAGCTACCTAAATCCGTTAACAATGATTGAGTAGTAACTAGGCTTTCAG K K G N S Y L N P L T M I E - - L G F Q R K V I A T - I R - Q - L S S N - A F R K E R - - L P K S V N N D - V V T R L S . . . . . . 59768 GGGATTCAACATGGACGATATAAGTCTCGAGATTACTCTGAATAGTAGGCCATTGGAAAG G I Q H G R Y K S R D Y S E - - A I G K G F N M D D I S L E I T L N S R P L E R G D S T W T I - V S R L L - I V G H W K . . . . . . 59828 AACAGAAGATGAAAACAAGAAGGATTTTCAATAATCCCATGGCTAGCTAATACAACAAGT N R R - K Q E G F S I I P W L A N T T S T E D E N K K D F Q - S H G - L I Q Q V E Q K M K T R R I F N N P M A S - Y N K . 59888 GATGATTTAT D D L M I Y - - F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-13_AGS-1_PPS_1 (58822 59301) (frame '0'; 477 bp, 159 residues) 1 ADSPSNSSPF PSLTVAFIFL SSVLAPTVRI QGAVFTAVIK DGPLFPAEQL TRIPLSVALY 61 APIAILSLWK GIGPPLRDIE RISTPSSIAE SMAAKTSLSE QPTELHTLYM AIWARGATPT 121 AVPSALPYTL APFTKAPAAV LAVCVPCPIL SIGEPLPSW- >C08HBa0165B06.1+_PGL-13_AGS-1_PPS_2 (57851 58030,58296 58418) (frame '2'; 300 bp, 100 residues) 1 HHQHWLQFWY MSEELIQVQI WKTKDSLIVL QGYFSPPSNS PCVVSGYLPV DLCTSNHINK 61 ECGFGVLVVI HGGRPSSKDI STRTDYVRLQ DSRTSSTWSS - >C08HBa0165B06.1+_PGL-13_AGS-1_PPS_3 (57634 57840) (frame '1'; 204 bp, 68 residues) 1 ADTTAIGLLT ECLLEVHFKN PSITSGFELL VVLENVTWYV NFWFNSEKFS SEGSTSMATP 61 SGEATSTL- AGS-2 (57660 58887,65061 65192) SCR (e 0.922 d 0.000 a 0.150,e 0.909) Exon 1 57660 58887 (1228 n); score: 0.922 Intron 1 58888 65060 (6173 n); Pd: 0.000 Pa: 0.150 Exon 2 65061 65192 ( 132 n); score: 0.909 PGS (57660 58229) SGN-E207413- PGS (57764 58206) SGN-E287935+ PGS (57870 58577) SGN-E213673- PGS (57890 58523) SGN-E213088- PGS (57994 58697) SGN-E212584- PGS (58022 58613) SGN-E329031- PGS (58045 58453) SGN-E317658- PGS (58108 58715) SGN-E308535- PGS (58176 58838) SGN-E397025- PGS (58270 58889) SGN-E306389- PGS (58588 58887,65061 65192) SGN-E208810- 3-phase translation of AGS-2 (+strand): . . . . . . 57660 CACTGAGTGCCTATTAGAAGTCCACTTCAAGAATCCCTCAATAACCTCAGGGTTTGAGCT H - V P I R S P L Q E S L N N L R V - A T E C L L E V H F K N P S I T S G F E L L S A Y - K S T S R I P Q - P Q G L S . . . . . . 57720 ATTAGTTGTCTTGGAAAATGTCACTTGGTATGTCAACTTCTGGTTCAACTCGGAGAAATT I S C L G K C H L V C Q L L V Q L G E I L V V L E N V T W Y V N F W F N S E K F Y - L S W K M S L G M S T S G S T R R N . . . . . . 57780 TAGCTCGGAGGGTTCAACTTCGATGGCAACGCCTTCTGGTGAAGCTACCTCCACTTTGTA - L G G F N F D G N A F W - S Y L H F V S S E G S T S M A T P S G E A T S T L - L A R R V Q L R W Q R L L V K L P P L C . . . . . . 57840 AGATGATGTAGCATCACCAACATTGGTTACAGTTCTGGTATATGTCTGAGGAGTTGATCC R - C S I T N I G Y S S G I C L R S - S D D V A S P T L V T V L V Y V - G V D P K M M - H H Q H W L Q F W Y M S E E L I . . . . . . 57900 AAGTCCAAATATGGAAAACGAAGGATAGTTTAATTGTGCTTCAAGGATACTTTTCACCTC K S K Y G K R R I V - L C F K D T F H L S P N M E N E G - F N C A S R I L F T S Q V Q I W K T K D S L I V L Q G Y F S P . . . . . . 57960 CGAGCAATTCACCCTGCGTTGTATCAGGTTACCTACCTGTTGATCTGTGTACTTCAAACC R A I H P A L Y Q V T Y L L I C V L Q T E Q F T L R C I R L P T C - S V Y F K P P S N S P C V V S G Y L P V D L C T S N . . . . . . 58020 ACATAAATAAGGTACATAGTCCTCGAATGGTGTATCATAAACTAGTCCTGGATCATTTGC T - I R Y I V L E W C I I N - S W I I C H K - G T - S S N G V S - T S P G S F A H I N K V H S P R M V Y H K L V L D H L . . . . . . 58080 CCTTGATGGATTAACATGTCCTGCACCAATTGCATAGATGTCAGCAGGAAGGAGCCTTTC P - W I N M S C T N C I D V S R K E P F L D G L T C P A P I A - M S A G R S L S P L M D - H V L H Q L H R C Q Q E G A F . . . . . . 58140 ATCGAGTATTGGACTATTAGCAAGGTTTAACGTGTCAGCCGTTGTCATCATTGCAGACTT I E Y W T I S K V - R V S R C H H C R L S S I G L L A R F N V S A V V I I A D L H R V L D Y - Q G L T C Q P L S S L Q T . . . . . . 58200 AATAACAGCAGGAGACCAATCAGGATGTGTGCATTTCAGCAGAGCTGCTACGCCACTAAG N N S R R P I R M C A F Q Q S C Y A T K I T A G D Q S G C V H F S R A A T P L R - - Q Q E T N Q D V C I S A E L L R H - . . . . . . 58260 GTGAGGGCAAGACATTGAGGTGCCTGATATGATATTGAATGTGGATTTGGTGTTCTTGTT V R A R H - G A - Y D I E C G F G V L V - G Q D I E V P D M I L N V D L V F L L G E G K T L R C L I - Y - M W I W C S C . . . . . . 58320 GTCATCCACGGAGGTAGGCCAAGCAGCAAGGATATTAGCACCAGGACCGATTATGTCAGG V I H G G R P S S K D I S T R T D Y V R S S T E V G Q A A R I L A P G P I M S G C H P R R - A K Q Q G Y - H Q D R L C Q . . . . . . 58380 CTTCAAGATTCCAGGACTAGCTCTACTTGGTCCTCTTGAGGAAAATGCAGCAACCATAGG L Q D S R T S S T W S S - G K C S N H R F K I P G L A L L G P L E E N A A T I G A S R F Q D - L Y L V L L R K M Q Q P - . . . . . . 58440 AGCATTTTTGTCTCCAATTATTGTTCCTTGGAATGCAATTGTAGCAACAGGGCTTGATGT S I F V S N Y C S L E C N C S N R A - C A F L S P I I V P W N A I V A T G L D V E H F C L Q L L F L G M Q L - Q Q G L M . . . . . . 58500 TGAGTTCATGTAAGCAAGAATTTTTGTTCCGTCTGCAGCTGAAACAACCAATGCTGGAAG - V H V S K N F C S V C S - N N Q C W K E F M - A R I F V P S A A E T T N A G R L S S C K Q E F L F R L Q L K Q P M L E . . . . . . 58560 AACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGTTGATGATAATCATGCC N M S I S - F S D T I L - W V D D N H A T - A S A D L V T P Y C D G L M I I M P E H E H Q L I - - H H I V M G - - - S C . . . . . . 58620 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACATTGGCTACATGGCCGAGTGC N T S S I L H S L S F I N I G Y M A E C T P P A S F T A C P L S T L A T W P S A Q H L Q H P S Q L V L Y Q H W L H G R V . . . . . . 58680 TGAACATAATACTATCTTTCCTCTTATAGCAGGGTCAGTGAGTGAACCTCGTCTGCAATA - T - Y Y L S S Y S R V S E - T S S A I E H N T I F P L I A G S V S E P R L Q - L N I I L S F L L - Q G Q - V N L V C N . . . . . . 58740 AGGGGTTTCGGATGGATCTTTTGCATTTTTTGCAGCATCAAATAGAGTGAAGAATGTTGC R G F G W I F C I F C S I K - S E E C C G V S D G S F A F F A A S N R V K N V A K G F R M D L L H F L Q H Q I E - R M L . . . . . . 58800 GTTGGAAATCTTTGGACGATAAGCAGATTCTCCTTCAAATTCCTCTCCATTTCCAAGCTT V G N L W T I S R F S F K F L S I S K L L E I F G R - A D S P S N S S P F P S L R W K S L D D K Q I L L Q I P L H F Q A . . . : . . . 58860 AACAGTAGCTTTTATCTTTCTGTCAAGC : GGTGCTGGCACCTACTGTAAGAATCCAAGGGG N S S F Y L S V K : R C W H L L - E S K G T V A F I F L S S : G A G T Y C K N P R G - Q - L L S F C Q A : V L A P T V R I Q G . . . . . . 65093 CTGAGTTATCTACTGAGCCATGGAATGGACCATCATTGCCTGCTGAGCAACTAACAAGAA L S Y L L S H G M D H H C L L S N - Q E - V I Y - A M E W T I I A C - A T N K N A E L S T E P W N G P S L P A E Q L T R . . . . 65153 TGCCTCTTTCTGTTGCACTGTATGCCCCCATAGCAATACT C L F L L H C M P P - Q Y A S F C C T V C P H S N T M P L S V A L Y A P I A I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-13_AGS-2_PPS_1 (58264 58512) (frame '2'; 246 bp, 82 residues) 1 GQDIEVPDMI LNVDLVFLLS STEVGQAARI LAPGPIMSGF KIPGLALLGP LEENAATIGA 61 FLSPIIVPWN AIVATGLDVE FM- >C08HBa0165B06.1+_PGL-13_AGS-2_PPS_2 (57851 58093) (frame '0'; 240 bp, 80 residues) 1 HHQHWLQFWY MSEELIQVQI WKTKDSLIVL QGYFSPPSNS PCVVSGYLPV DLCTSNHINK 61 VHSPRMVYHK LVLDHLPLMD - AGS-3 (63762 64204,64470 66058) SCR (e 0.868 d 0.183 a 0.000,e 0.824) Exon 1 63762 64204 ( 443 n); score: 0.868 Intron 1 64205 64469 ( 265 n); Pd: 0.183 Pa: 0.000 Exon 2 64470 66058 (1589 n); score: 0.824 PGS (63762 63894) SGN-E353214- PGS (63793 64194) SGN-E307529- PGS (63816 64204,64470 64745) SGN-E548357+ PGS (64511 65281) SGN-E540271- PGS (64513 64874) SGN-E200689- PGS (64523 65012) SGN-E282432- PGS (64543 65034) SGN-E210009- PGS (64627 65281) SGN-E335107- PGS (64641 65192) SGN-E208913- PGS (64703 65280) SGN-E286017- PGS (64715 65292) SGN-E244401- PGS (64733 65292) SGN-E244422- PGS (64936 65399) SGN-E202140- PGS (65257 66032) SGN-E539488- PGS (65519 66058) SGN-E207645- PGS (65528 66058) SGN-E330205- PGS (65587 66054) SGN-E207387- PGS (65596 66029) SGN-E282403- 3-phase translation of AGS-3 (+strand): . . . . . . 63762 AAATGTATGAGTAGTTTATGCACTCGTAAAGCCAATTTTTGACTAGGCTAACACAACTGC K C M S S L C T R K A N F - L G - H N C N V - V V Y A L V K P I F D - A N T T A M Y E - F M H S - S Q F L T R L T Q L . . . . . . 63822 AATTGGACTTCTCACTGAGTGTCTACTAGAAGTCCATTTCAAGAATCCATCAACAATCAC N W T S H - V S T R S P F Q E S I N N H I G L L T E C L L E V H F K N P S T I T Q L D F S L S V Y - K S I S R I H Q Q S . . . . . . 63882 AAAGTTTGAGCTGCTAGTTGTCTTGGAAAATGTCACTTGGTATGTTAACTTCTGGTTCAA K V - A A S C L G K C H L V C - L L V Q K F E L L V V L E N V T W Y V N F W F N Q S L S C - L S W K M S L G M L T S G S . . . . . . 63942 CTCGGAGAAATTTAGCTCTGTGGGCTTAACTTCCACGGCAACGCCTTTTGGTGAAGCTAC L G E I - L C G L N F H G N A F W - S Y S E K F S S V G L T S T A T P F G E A T T R R N L A L W A - L P R Q R L L V K L . . . . . . 64002 CTCCACTTTGTAAGATGATGTAGCGTCACCAACGTTGGTCACAGTTCTTGTATATGTCTG L H F V R - C S V T N V G H S S C I C L S T L - D D V A S P T L V T V L V Y V - P P L C K M M - R H Q R W S Q F L Y M S . . . . . . 64062 AGGAGTTGATCCAAGTTCAGTTATGCAAAATGAAGGATAGTTTAATTGTGCTTCAAGGAT R S - S K F S Y A K - R I V - L C F K D G V D P S S V M Q N E G - F N C A S R I E E L I Q V Q L C K M K D S L I V L Q G . . . . . . 64122 AATTTTCACCTCCGAGCAATTCACCCTGCGTTGTAACAGGTTACCTACCTGTCGATTCGT N F H L R A I H P A L - Q V T Y L S I R I F T S E Q F T L R C N R L P T C R F V - F S P P S N S P C V V T G Y L P V D S . . . : . . . 64182 ATAGTTCAAACCACATAAATAAG : GAATGTGGATTTGGTGTCCTTGTTGTCATCCACGGAG I V Q T T - I R : N V D L V S L L S S T E - F K P H K - : G M W I W C P C C H P R R Y S S N H I N K : E C G F G V L V V I H G . . . . . . 64507 GTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATTATGTCAGGTTTCAAGATGCCA V G Q A A R I L T P G P I M S G F K M P - A K Q Q G Y - H Q D R L C Q V S R C Q G R P S S K D I N T R T D Y V R F Q D A . . . . . . 64567 GGACTAGCTCTACTTGGTCCTCTTGAGGAAAATGCAGCAACCATAGGAGCATTTTTATCT G L A L L G P L E E N A A T I G A F L S D - L Y L V L L R K M Q Q P - E H F Y L R T S S T W S S - G K C S N H R S I F I . . . . . . 64627 CCAATTATTGTTCCTTGGAATGCGATTGTAGCAACAGGGTTTGATGTTGAATTCATATAA P I I V P W N A I V A T G F D V E F I - Q L L F L G M R L - Q Q G L M L N S Y K S N Y C S L E C D C S N R V - C - I H I . . . . . . 64687 GCAAGGATTTTTGTTCCATCTGCATCTGAAACATCCAATGCTGGAAGAACATGAGCATCA A R I F V P S A S E T S N A G R T - A S Q G F L F H L H L K H P M L E E H E H Q S K D F C S I C I - N I Q C W K N M S I . . . . . . 64747 GCTGATTTAGTAACACCGTCATCTGGACTGTTGATGATAATCATGCCAACACCTCCAGCA A D L V T P S S G L L M I I M P T P P A L I - - H R H L D C - - - S C Q H L Q H S - F S N T V I W T V D D N H A N T S S . . . . . . 64807 TCCTTCACAGCTTGTCCTTTATCAACAATGGTTACACCACCGAATGCTAAACATAACACT S F T A C P L S T M V T P P N A K H N T P S Q L V L Y Q Q W L H H R M L N I T L I L H S L S F I N N G Y T T E C - T - H . . . . . . 64867 ATCTTTCCTCTTATGGCAGGGTCAGTGAGCGACCCTGGTCTGCAATAAGGGGTTTTAAAT I F P L M A G S V S D P G L Q - G V L N S F L L W Q G Q - A T L V C N K G F - I Y L S S Y G R V S E R P W S A I R G F K . . . . . . 64927 TCATCACTTGCATTTTTTGCAGCATCAAATAATGTGAAGAAGGTTGAGTTGGAAATCTGT S S L A F F A A S N N V K K V E L E I C H H L H F L Q H Q I M - R R L S W K S V F I T C I F C S I K - C E E G - V G N L . . . . . . 64987 GGACGATAAGCAGATTCTCCTTGAAATTCCTCTCTATTTCCAAGCTTAACAGTAGCTTTT G R - A D S P - N S S L F P S L T V A F D D K Q I L L E I P L Y F Q A - Q - L L W T I S R F S L K F L S I S K L N S S F . . . . . . 65047 ATCTTTCTGTCAAGGGTGCTGGCACCTACTGTAAGAATCCAAGGGGCTGAGTTATCTACT I F L S R V L A P T V R I Q G A E L S T S F C Q G C W H L L - E S K G L S Y L L Y L S V K G A G T Y C K N P R G - V I Y . . . . . . 65107 GAGCCATGGAATGGACCATCATTGCCTGCTGAGCAACTAACAAGAATGCCTCTTTCTGTT E P W N G P S L P A E Q L T R M P L S V S H G M D H H C L L S N - Q E C L F L L - A M E W T I I A C - A T N K N A S F C . . . . . . 65167 GCACTGTATGCCCCCATAGCAATACTGTCTTCATAGAGAGGGATTGGACTTCCACCAAGA A L Y A P I A I L S S - R G I G L P P R H C M P P - Q Y C L H R E G L D F H Q E C T V C P H S N T V F I E R D W T S T K . . . . . . 65227 GAGATTGAAAGAATATCTACACCATCATCTATAGCTGCATCCATGGCAGCTAAAATATCA E I E R I S T P S S I A A S M A A K I S R L K E Y L H H H L - L H P W Q L K Y H R D - K N I Y T I I Y S C I H G S - N I . . . . . . 65287 CTGTCAGAACAACCATCAGAACTACACACCTTATATATGGCTATGTGGGCAAGAGGGGCA L S E Q P S E L H T L Y M A M W A R G A C Q N N H Q N Y T P Y I W L C G Q E G Q T V R T T I R T T H L I Y G Y V G K R G . . . . . . 65347 ACACCAACAGCAGTGCCATTAGCATTCCCAAATACATTAGCACCTTTCACAAAGGCTCCT T P T A V P L A F P N T L A P F T K A P H Q Q Q C H - H S Q I H - H L S Q R L L N T N S S A I S I P K Y I S T F H K G S . . . . . . 65407 GCAGCTGTGCTTGCTGTGTGTGTACCATGTCCATCATCGTCTATCGGGGAACCATTGGCA A A V L A V C V P C P S S S I G E P L A Q L C L L C V Y H V H H R L S G N H W Q C S C A C C V C T M S I I V Y R G T I G . . . . . . 65467 AGTTGGTAAGACCTCGCTCCAATGAGCTTGTTGTTACACTTGTTTGTGAAATTGGACTCG S W - D L A P M S L L L H L F V K L D S V G K T S L Q - A C C Y T C L - N W T R K L V R P R S N E L V V T L V C E I G L . . . . . . 65527 CAAACTCCCTTCCACTTAGCAGGTGGGGAAGGCATCCCAACGTCGCTAAGTGAAGGATGG Q T P F H L A G G E G I P T S L S E G W K L P S T - Q V G K A S Q R R - V K D G A N S L P L S R W G R H P N V A K - R M . . . . . . 65587 TCAGGAACGATTCCAGTGTCTATAACTCCAATGATCACGCCTTTCCCATAGTTGGAATCC S G T I P V S I T P M I T P F P - L E S Q E R F Q C L - L Q - S R L S H S W N P V R N D S S V Y N S N D H A F P I V G I . . . . . . 65647 TTCCACAAGCCCATGTTCTGTTGCAAACCAAGAAAACTTGGAGTATGAGTAGTGTGCAAG F H K P M F C C K P R K L G V - V V C K S T S P C S V A N Q E N L E Y E - C A R L P Q A H V L L Q T K K T W S M S S V Q . . . . . . 65707 GACAAAATCCTCTGTTTCTGAGCAGAGACAAAGCCGTGTTTCTTCTCCATTTCCTTCACT D K I L C F - A E T K P C F F S I S F T T K S S V S E Q R Q S R V S S P F P S L G Q N P L F L S R D K A V F L L H F L H . . . . . . 65767 TGTTCTGCCGTTAATCTTGCTGCAAACCCTGTCATCACATTGTGATAGGAATAGATCATG C S A V N L A A N P V I T L - - E - I M V L P L I L L Q T L S S H C D R N R S W L F C R - S C C K P C H H I V I G I D H . . . . . . 65827 GTAGCAGCCTCTTCATTTCCACTCGAACTAATTGTGGTAGTAGTTTTAGGCAAAAAAGAA V A A S S F P L E L I V V V V L G K K E - Q P L H F H S N - L W - - F - A K K K G S S L F I S T R T N C G S S F R Q K R . . . . . . 65887 AGGTAATAGCTATCTAAATCCGTTAACGATGATTGAGTAGTAATTAGGCTTTCTGGGGAT R - - L S K S V N D D - V V I R L S G D G N S Y L N P L T M I E - - L G F L G I K V I A I - I R - R - L S S N - A F W G . . . . . . 65947 TCAACATGGACGATATAAGTCTCGAGATCACTCTGAATAGTAGGCCATGGGAAAGAACAA S T W T I - V S R S L - I V G H G K E Q Q H G R Y K S R D H S E - - A M G K N K F N M D D I S L E I T L N S R P W E R T . . . . . . 66007 AAGATGAAAACAAAAAGGATTTTGAAGAATCCCATGGCTGCAAATACAAGAA K M K T K R I L K N P M A A N T R R - K Q K G F - R I P W L Q I Q E K D E N K K D F E E S H G C K Y K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-13_AGS-3_PPS_1 (65280 65579) (frame '0'; 297 bp, 99 residues) 1 NITVRTTIRT THLIYGYVGK RGNTNSSAIS IPKYISTFHK GSCSCACCVC TMSIIVYRGT 61 IGKLVRPRSN ELVVTLVCEI GLANSLPLSR WGRHPNVAK- >C08HBa0165B06.1+_PGL-13_AGS-3_PPS_2 (65203 65475) (frame '1'; 270 bp, 90 residues) 1 RGIGLPPREI ERISTPSSIA ASMAAKISLS EQPSELHTLY MAMWARGATP TAVPLAFPNT 61 LAPFTKAPAA VLAVCVPCPS SSIGEPLASW - >C08HBa0165B06.1+_PGL-13_AGS-3_PPS_3 (64200 64204,64470 64686) (frame '1'; 219 bp, 73 residues) 1 IRNVDLVSLL SSTEVGQAAR ILTPGPIMSG FKMPGLALLG PLEENAATIG AFLSPIIVPW 61 NAIVATGFDV EFI- >C08HBa0165B06.1+_PGL-13_AGS-3_PPS_4 (63808 64014) (frame '2'; 204 bp, 68 residues) 1 ANTTAIGLLT ECLLEVHFKN PSTITKFELL VVLENVTWYV NFWFNSEKFS SVGLTSTATP 61 FGEATSTL- >C08HBa0165B06.1+_PGL-13_AGS-3_PPS_5 (65580 65780) (frame '0'; 198 bp, 66 residues) 1 RMVRNDSSVY NSNDHAFPIV GILPQAHVLL QTKKTWSMSS VQGQNPLFLS RDKAVFLLHF 61 LHLFCR- AGS-4 (63834 65063) SCR (e 0.901) Exon 1 63834 65063 (1230 n); score: 0.901 PGS (63834 64407) SGN-E207413- PGS (63938 64377) SGN-E287935+ PGS (64044 64751) SGN-E213673- PGS (64064 64697) SGN-E213088- PGS (64168 64871) SGN-E212584- PGS (64196 64787) SGN-E329031- PGS (64219 64627) SGN-E317658- PGS (64285 64889) SGN-E308535- PGS (64350 65012) SGN-E397025- PGS (64444 65063) SGN-E306389- 3-phase translation of AGS-4 (+strand): . . . . . . 63834 CACTGAGTGTCTACTAGAAGTCCATTTCAAGAATCCATCAACAATCACAAAGTTTGAGCT H - V S T R S P F Q E S I N N H K V - A T E C L L E V H F K N P S T I T K F E L L S V Y - K S I S R I H Q Q S Q S L S . . . . . . 63894 GCTAGTTGTCTTGGAAAATGTCACTTGGTATGTTAACTTCTGGTTCAACTCGGAGAAATT A S C L G K C H L V C - L L V Q L G E I L V V L E N V T W Y V N F W F N S E K F C - L S W K M S L G M L T S G S T R R N . . . . . . 63954 TAGCTCTGTGGGCTTAACTTCCACGGCAACGCCTTTTGGTGAAGCTACCTCCACTTTGTA - L C G L N F H G N A F W - S Y L H F V S S V G L T S T A T P F G E A T S T L - L A L W A - L P R Q R L L V K L P P L C . . . . . . 64014 AGATGATGTAGCGTCACCAACGTTGGTCACAGTTCTTGTATATGTCTGAGGAGTTGATCC R - C S V T N V G H S S C I C L R S - S D D V A S P T L V T V L V Y V - G V D P K M M - R H Q R W S Q F L Y M S E E L I . . . . . . 64074 AAGTTCAGTTATGCAAAATGAAGGATAGTTTAATTGTGCTTCAAGGATAATTTTCACCTC K F S Y A K - R I V - L C F K D N F H L S S V M Q N E G - F N C A S R I I F T S Q V Q L C K M K D S L I V L Q G - F S P . . . . . . 64134 CGAGCAATTCACCCTGCGTTGTAACAGGTTACCTACCTGTCGATTCGTATAGTTCAAACC R A I H P A L - Q V T Y L S I R I V Q T E Q F T L R C N R L P T C R F V - F K P P S N S P C V V T G Y L P V D S Y S S N . . . . . . 64194 ACATAAATAAGGTAGATAGTCCTCAAATGGGATATCATAAACTAGTCCTGGATCATTTGC T - I R - I V L K W D I I N - S W I I C H K - G R - S S N G I S - T S P G S F A H I N K V D S P Q M G Y H K L V L D H L . . . . . . 64254 CCTCGATGGATTAACATGTCCTGCACCAGTGGCAAAAATGTCAGCAGGAAGGAGCCTTTC P R W I N M S C T S G K N V S R K E P F L D G L T C P A P V A K M S A G R S L S P S M D - H V L H Q W Q K C Q Q E G A F . . . . . . 64314 GTCTAGTATTGGACTATTGGCAAGGTTTAACGTGTCAGCAGTTGTCATGATTGCAGACTT V - Y W T I G K V - R V S S C H D C R L S S I G L L A R F N V S A V V M I A D L R L V L D Y W Q G L T C Q Q L S - L Q T . . . . . . 64374 AATAGCTGCAGGAGACCAATCAGGATGTGTGCTCTTCAGCAGAGCTGCTACGCCACTAAG N S C R R P I R M C A L Q Q S C Y A T K I A A G D Q S G C V L F S R A A T P L R - - L Q E T N Q D V C S S A E L L R H - . . . . . . 64434 GTGAGGGCAAGACATTGAGGTGCCTGATATAATATTGAATGTGGATTTGGTGTCCTTGTT V R A R H - G A - Y N I E C G F G V L V - G Q D I E V P D I I L N V D L V S L L G E G K T L R C L I - Y - M W I W C P C . . . . . . 64494 GTCATCCACGGAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATTATGTCAGG V I H G G R P S S K D I N T R T D Y V R S S T E V G Q A A R I L T P G P I M S G C H P R R - A K Q Q G Y - H Q D R L C Q . . . . . . 64554 TTTCAAGATGCCAGGACTAGCTCTACTTGGTCCTCTTGAGGAAAATGCAGCAACCATAGG F Q D A R T S S T W S S - G K C S N H R F K M P G L A L L G P L E E N A A T I G V S R C Q D - L Y L V L L R K M Q Q P - . . . . . . 64614 AGCATTTTTATCTCCAATTATTGTTCCTTGGAATGCGATTGTAGCAACAGGGTTTGATGT S I F I S N Y C S L E C D C S N R V - C A F L S P I I V P W N A I V A T G F D V E H F Y L Q L L F L G M R L - Q Q G L M . . . . . . 64674 TGAATTCATATAAGCAAGGATTTTTGTTCCATCTGCATCTGAAACATCCAATGCTGGAAG - I H I S K D F C S I C I - N I Q C W K E F I - A R I F V P S A S E T S N A G R L N S Y K Q G F L F H L H L K H P M L E . . . . . . 64734 AACATGAGCATCAGCTGATTTAGTAACACCGTCATCTGGACTGTTGATGATAATCATGCC N M S I S - F S N T V I W T V D D N H A T - A S A D L V T P S S G L L M I I M P E H E H Q L I - - H R H L D C - - - S C . . . . . . 64794 AACACCTCCAGCATCCTTCACAGCTTGTCCTTTATCAACAATGGTTACACCACCGAATGC N T S S I L H S L S F I N N G Y T T E C T P P A S F T A C P L S T M V T P P N A Q H L Q H P S Q L V L Y Q Q W L H H R M . . . . . . 64854 TAAACATAACACTATCTTTCCTCTTATGGCAGGGTCAGTGAGCGACCCTGGTCTGCAATA - T - H Y L S S Y G R V S E R P W S A I K H N T I F P L M A G S V S D P G L Q - L N I T L S F L L W Q G Q - A T L V C N . . . . . . 64914 AGGGGTTTTAAATTCATCACTTGCATTTTTTGCAGCATCAAATAATGTGAAGAAGGTTGA R G F K F I T C I F C S I K - C E E G - G V L N S S L A F F A A S N N V K K V E K G F - I H H L H F L Q H Q I M - R R L . . . . . . 64974 GTTGGAAATCTGTGGACGATAAGCAGATTCTCCTTGAAATTCCTCTCTATTTCCAAGCTT V G N L W T I S R F S L K F L S I S K L L E I C G R - A D S P - N S S L F P S L S W K S V D D K Q I L L E I P L Y F Q A . . . 65034 AACAGTAGCTTTTATCTTTCTGTCAAGGGT N S S F Y L S V K G T V A F I F L S R - Q - L L S F C Q G Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-13_AGS-4_PPS_1 (64438 64686) (frame '2'; 246 bp, 82 residues) 1 GQDIEVPDII LNVDLVSLLS STEVGQAARI LTPGPIMSGF KMPGLALLGP LEENAATIGA 61 FLSPIIVPWN AIVATGFDVE FI- >C08HBa0165B06.1+_PGL-13_AGS-4_PPS_2 (64234 64437) (frame '2'; 201 bp, 67 residues) 1 TSPGSFALDG LTCPAPVAKM SAGRSLSSSI GLLARFNVSA VVMIADLIAA GDQSGCVLFS 61 RAATPLR- 3-phase translation of AGS-4 (-strand): . . . . . . 65063 ACCCTTGACAGAAAGATAAAAGCTACTGTTAAGCTTGGAAATAGAGAGGAATTTCAAGGA T L D R K I K A T V K L G N R E E F Q G P L T E R - K L L L S L E I E R N F K E P - Q K D K S Y C - A W K - R G I S R . . . . . . 65003 GAATCTGCTTATCGTCCACAGATTTCCAACTCAACCTTCTTCACATTATTTGATGCTGCA E S A Y R P Q I S N S T F F T L F D A A N L L I V H R F P T Q P S S H Y L M L Q R I C L S S T D F Q L N L L H I I - C C . . . . . . 64943 AAAAATGCAAGTGATGAATTTAAAACCCCTTATTGCAGACCAGGGTCGCTCACTGACCCT K N A S D E F K T P Y C R P G S L T D P K M Q V M N L K P L I A D Q G R S L T L K K C K - - I - N P L L Q T R V A H - P . . . . . . 64883 GCCATAAGAGGAAAGATAGTGTTATGTTTAGCATTCGGTGGTGTAACCATTGTTGATAAA A I R G K I V L C L A F G G V T I V D K P - E E R - C Y V - H S V V - P L L I K C H K R K D S V M F S I R W C N H C - - . . . . . . 64823 GGACAAGCTGTGAAGGATGCTGGAGGTGTTGGCATGATTATCATCAACAGTCCAGATGAC G Q A V K D A G G V G M I I I N S P D D D K L - R M L E V L A - L S S T V Q M T R T S C E G C W R C W H D Y H Q Q S R - . . . . . . 64763 GGTGTTACTAAATCAGCTGATGCTCATGTTCTTCCAGCATTGGATGTTTCAGATGCAGAT G V T K S A D A H V L P A L D V S D A D V L L N Q L M L M F F Q H W M F Q M Q M R C Y - I S - C S C S S S I G C F R C R . . . . . . 64703 GGAACAAAAATCCTTGCTTATATGAATTCAACATCAAACCCTGTTGCTACAATCGCATTC G T K I L A Y M N S T S N P V A T I A F E Q K S L L I - I Q H Q T L L L Q S H S W N K N P C L Y E F N I K P C C Y N R I . . . . . . 64643 CAAGGAACAATAATTGGAGATAAAAATGCTCCTATGGTTGCTGCATTTTCCTCAAGAGGA Q G T I I G D K N A P M V A A F S S R G K E Q - L E I K M L L W L L H F P Q E D P R N N N W R - K C S Y G C C I F L K R . . . . . . 64583 CCAAGTAGAGCTAGTCCTGGCATCTTGAAACCTGACATAATCGGTCCTGGTGTTAATATC P S R A S P G I L K P D I I G P G V N I Q V E L V L A S - N L T - S V L V L I S T K - S - S W H L E T - H N R S W C - Y . . . . . . 64523 CTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAGGACACCAAATCCACATTCAATATT L A A W P T S V D D N K D T K S T F N I L L L G L P P W M T T R T P N P H S I L P C C L A Y L R G - Q Q G H Q I H I Q Y . . . . . . 64463 ATATCAGGCACCTCAATGTCTTGCCCTCACCTTAGTGGCGTAGCAGCTCTGCTGAAGAGC I S G T S M S C P H L S G V A A L L K S Y Q A P Q C L A L T L V A - Q L C - R A Y I R H L N V L P S P - W R S S S A E E . . . . . . 64403 ACACATCCTGATTGGTCTCCTGCAGCTATTAAGTCTGCAATCATGACAACTGCTGACACG T H P D W S P A A I K S A I M T T A D T H I L I G L L Q L L S L Q S - Q L L T R H T S - L V S C S Y - V C N H D N C - H . . . . . . 64343 TTAAACCTTGCCAATAGTCCAATACTAGACGAAAGGCTCCTTCCTGCTGACATTTTTGCC L N L A N S P I L D E R L L P A D I F A - T L P I V Q Y - T K G S F L L T F L P V K P C Q - S N T R R K A P S C - H F C . . . . . . 64283 ACTGGTGCAGGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTAGTTTATGATATC T G A G H V N P S R A N D P G L V Y D I L V Q D M L I H R G Q M I Q D - F M I S H W C R T C - S I E G K - S R T S L - Y . . . . . . 64223 CCATTTGAGGACTATCTACCTTATTTATGTGGTTTGAACTATACGAATCGACAGGTAGGT P F E D Y L P Y L C G L N Y T N R Q V G H L R T I Y L I Y V V - T I R I D R - V P I - G L S T L F M W F E L Y E S T G R . . . . . . 64163 AACCTGTTACAACGCAGGGTGAATTGCTCGGAGGTGAAAATTATCCTTGAAGCACAATTA N L L Q R R V N C S E V K I I L E A Q L T C Y N A G - I A R R - K L S L K H N - - P V T T Q G E L L G G E N Y P - S T I . . . . . . 64103 AACTATCCTTCATTTTGCATAACTGAACTTGGATCAACTCCTCAGACATATACAAGAACT N Y P S F C I T E L G S T P Q T Y T R T T I L H F A - L N L D Q L L R H I Q E L K L S F I L H N - T W I N S S D I Y K N . . . . . . 64043 GTGACCAACGTTGGTGACGCTACATCATCTTACAAAGTGGAGGTAGCTTCACCAAAAGGC V T N V G D A T S S Y K V E V A S P K G - P T L V T L H H L T K W R - L H Q K A C D Q R W - R Y I I L Q S G G S F T K R . . . . . . 63983 GTTGCCGTGGAAGTTAAGCCCACAGAGCTAAATTTCTCCGAGTTGAACCAGAAGTTAACA V A V E V K P T E L N F S E L N Q K L T L P W K L S P Q S - I S P S - T R S - H R C R G S - A H R A K F L R V E P E V N . . . . . . 63923 TACCAAGTGACATTTTCCAAGACAACTAGCAGCTCAAACTTTGTGATTGTTGATGGATTC Y Q V T F S K T T S S S N F V I V D G F T K - H F P R Q L A A Q T L - L L M D S I P S D I F Q D N - Q L K L C D C - W I . . . 63863 TTGAAATGGACTTCTAGTAGACACTCAGTG L K W T S S R H S V - N G L L V D T Q L E M D F - - T L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-13_AGS-4_PPS_1 (65063 63834) (frame '1'; 1230 bp, 410 residues) 1 TLDRKIKATV KLGNREEFQG ESAYRPQISN STFFTLFDAA KNASDEFKTP YCRPGSLTDP 61 AIRGKIVLCL AFGGVTIVDK GQAVKDAGGV GMIIINSPDD GVTKSADAHV LPALDVSDAD 121 GTKILAYMNS TSNPVATIAF QGTIIGDKNA PMVAAFSSRG PSRASPGILK PDIIGPGVNI 181 LAAWPTSVDD NKDTKSTFNI ISGTSMSCPH LSGVAALLKS THPDWSPAAI KSAIMTTADT 241 LNLANSPILD ERLLPADIFA TGAGHVNPSR ANDPGLVYDI PFEDYLPYLC GLNYTNRQVG 301 NLLQRRVNCS EVKIILEAQL NYPSFCITEL GSTPQTYTRT VTNVGDATSS YKVEVASPKG 361 VAVEVKPTEL NFSELNQKLT YQVTFSKTTS SSNFVIVDGF LKWTSSRHSV PGL 14 (+ strand): 67263 67409 AGS-1 (67263 67409) SCR (e 0.810) Exon 1 67263 67409 ( 147 n); score: 0.810 PGS (67263 67409) SGN-E219208- PGS (67263 67409) SGN-E219032- 3-phase translation of AGS-1 (+strand): . . . . . . 67263 ATCATAATATAAAAGTACTAAATCATGTTAAAATAAGTTTAATAAGTATTAGTTACATGA I I I - K Y - I M L K - V - - V L V T - S - Y K S T K S C - N K F N K Y - L H D H N I K V L N H V K I S L I S I S Y M . . . . . . 67323 CTAAATATTAAAGAAAATTAAAATTAGACTATGTATTTCAATTGTCTAAACTAATGTAAA L N I K E N - N - T M Y F N C L N - C K - I L K K I K I R L C I S I V - T N V K T K Y - R K L K L D Y V F Q L S K L M - . . . 67383 ATCAAAGAACAAATATTTAATATTATT I K E Q I F N I I S K N K Y L I L N Q R T N I - Y Y Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 67409 AATAATATTAAATATTTGTTCTTTGATTTTACATTAGTTTAGACAATTGAAATACATAGT N N I K Y L F F D F T L V - T I E I H S I I L N I C S L I L H - F R Q L K Y I V - Y - I F V L - F Y I S L D N - N T - . . . . . . 67349 CTAATTTTAATTTTCTTTAATATTTAGTCATGTAACTAATACTTATTAAACTTATTTTAA L I L I F F N I - S C N - Y L L N L F - - F - F S L I F S H V T N T Y - T Y F N S N F N F L - Y L V M - L I L I K L I L . . . 67289 CATGATTTAGTACTTTTATATTATGAT H D L V L L Y Y D M I - Y F Y I M T - F S T F I L - Maximal non-overlapping open reading frames (>= 64 codons): none PGL 15 (- strand): 71753 69401 AGS-1 (71753 69401) SCR (e 0.999) Exon 1 71753 69401 (2353 n); score: 0.999 PGS (69928 69401) SGN-E207645- PGS (69919 69402) SGN-E330205- PGS (69860 69402) SGN-E207387- PGS (70193 69415) SGN-E539488- PGS (70513 70048) SGN-E202140- PGS (70939 70169) SGN-E540271- PGS (70747 70170) SGN-E286017- PGS (71006 70387) SGN-E306389- PGS (71100 70438) SGN-E397025- PGS (71168 70561) SGN-E308535- PGS (71282 70579) SGN-E212584- PGS (71254 70663) SGN-E329031- PGS (71402 70699) SGN-E213673- PGS (71383 70753) SGN-E213088- PGS (71231 70823) SGN-E317658- PGS (71612 71043) SGN-E207413- PGS (71509 71073) SGN-E287935+ PGS (71753 71319) SGN-E237320+ PGS (71753 71410) SGN-E237418+ 3-phase translation of AGS-1 (-strand): . . . . . . 71753 TGACATAAAACATATACTGGAAAAAAAAAACAGCAATCCAATATGATTAATTGTGAATAA - H K T Y T G K K K Q Q S N M I N C E - D I K H I L E K K N S N P I - L I V N N T - N I Y W K K K T A I Q Y D - L - I . . . . . . 71693 TTTCTGCACTTATTTTTACATTTTAGATTGAAAGCATTTTAGTTTTATTCAGCAGACACT F L H L F L H F R L K A F - F Y S A D T F C T Y F Y I L D - K H F S F I Q Q T L I S A L I F T F - I E S I L V L F S R H . . . . . . 71633 CTAACTGCAATTGGACTTCTTACAGAGTGCCTATTAGAATTCCACTTCAAAAATCCCTCA L T A I G L L T E C L L E F H F K N P S - L Q L D F L Q S A Y - N S T S K I P Q S N C N W T S Y R V P I R I P L Q K S L . . . . . . 71573 ACATCACTGGTAGTTGAGATATTAGTTGTCTTGGTAAATATCACTTGATATGTCAACTTC T S L V V E I L V V L V N I T - Y V N F H H W - L R Y - L S W - I S L D M S T S N I T G S - D I S C L G K Y H L I C Q L . . . . . . 71513 TGGTTCAACGTTGAGAAATTTAGCGCGGAGGGTTCAACTTTCACGACAACTCCTTTTGGT W F N V E K F S A E G S T F T T T P F G G S T L R N L A R R V Q L S R Q L L L V L V Q R - E I - R G G F N F H D N S F W . . . . . . 71453 GAAACTATCTCCACTTTGTAAGATGATTTAGCATCACCAACATTGGTTACGGTTCTGGTA E T I S T L - D D L A S P T L V T V L V K L S P L C K M I - H H Q H W L R F W Y - N Y L H F V R - F S I T N I G Y G S G . . . . . . 71393 TATGTCTGAGGAGTTGATCCAAGTCTGATGGAAAATGAAGGATAATTTAGTTGCCCTTCA Y V - G V D P S L M E N E G - F S C P S M S E E L I Q V - W K M K D N L V A L Q I C L R S - S K S D G K - R I I - L P F . . . . . . 71333 GGGATACGTTTTACCTCCGAGCAATTCACCTTGCGTTGTAACACTTTACCTACCTCCCGA G I R F T S E Q F T L R C N T L P T S R G Y V L P P S N S P C V V T L Y L P P D R D T F Y L R A I H L A L - H F T Y L P . . . . . . 71273 TTTGTGTAGTTCAAACCACATAAATAAGGAATGTAGTCCTCGAATGGTGTATCATAAACT F V - F K P H K - G M - S S N G V S - T L C S S N H I N K E C S P R M V Y H K L I C V V Q T T - I R N V V L E W C I I N . . . . . . 71213 AGTCCTGGATCACTTGCTCTCGATGGATTAACATGTCCTGCACCCATTGCAAAGAGATCA S P G S L A L D G L T C P A P I A K R S V L D H L L S M D - H V L H P L Q R D Q - S W I T C S R W I N M S C T H C K E I . . . . . . 71153 GCAGAAATGAGCCTTTCGTCCAGTATTGGACTGTTGGCGAGGTTTACTGTGTCAGCTGTT A E M S L S S S I G L L A R F T V S A V Q K - A F R P V L D C W R G L L C Q L L S R N E P F V Q Y W T V G E V Y C V S C . . . . . . 71093 GTCATCATTGCTGACTTAATAGCTGCAGGAGACCAATCAGGATGTGCGCTCTTCAGCAGA V I I A D L I A A G D Q S G C A L F S R S S L L T - - L Q E T N Q D V R S S A E C H H C - L N S C R R P I R M C A L Q Q . . . . . . 71033 GCTGCAACACCACTAAGGTGAGGGCAAGACATTGAGGTTCCGGATACTATATTGAATGTT A A T P L R - G Q D I E V P D T I L N V L Q H H - G E G K T L R F R I L Y - M L S C N T T K V R A R H - G S G Y Y I E C . . . . . . 70973 GATTTTGTGTTTTTGTTGTTATCCACGGAGGTAGGCCAAGCAGCAAGGACGTTAACACCA D F V F L L L S T E V G Q A A R T L T P I L C F C C Y P R R - A K Q Q G R - H Q - F C V F V V I H G G R P S S K D V N T . . . . . . 70913 GGACCGATTATGTCAGGTTTTAAGATGCCAGGACTTGCTACGCTTGGTCCTCGTGAGGAA G P I M S G F K M P G L A T L G P R E E D R L C Q V L R C Q D L L R L V L V R K R T D Y V R F - D A R T C Y A W S S - G . . . . . . 70853 AATGAAGCAACTATAGGAGCATTTTTGTCTCCAATTACAGTTCCATGGAAGGTGATTGAA N E A T I G A F L S P I T V P W K V I E M K Q L - E H F C L Q L Q F H G R - L K K - S N Y R S I F V S N Y S S M E G D - . . . . . . 70793 GCAACCGGATTTGAAGATGAGTTCATATAGGCAAGAATTTTCTTTCCATCAGCATTTGAA A T G F E D E F I - A R I F F P S A F E Q P D L K M S S Y R Q E F S F H Q H L K S N R I - R - V H I G K N F L S I S I - . . . . . . 70733 ACATCCAATGCAGGAAGGACATGAGCTTCAGCTGATTTAGTCACACCCTCTTCTTGTTCA T S N A G R T - A S A D L V T P S S C S H P M Q E G H E L Q L I - S H P L L V H N I Q C R K D M S F S - F S H T L F L F . . . . . . 70673 TTGATGAGAATCATGCCAACACCTCCAGCATCCTTTACGGATTGTCCTTGAGCAACTCTG L M R I M P T P P A S F T D C P - A T L - - E S C Q H L Q H P L R I V L E Q L - I D E N H A N T S S I L Y G L S L S N S . . . . . . 70613 AGAAGACTTATACTTCGCAAACACAAGACTATCTTACCTTTGATAGCAGGGTCATTAAGT R R L I L R K H K T I L P L I A G S L S E D L Y F A N T R L S Y L - - Q G H - V E K T Y T S Q T Q D Y L T F D S R V I K . . . . . . 70553 GAGCCTGGACTACAAAAAGGCGCGCTAAATTGATCACTTTCATTCTTTCCAGCATCATAT E P G L Q K G A L N - S L S F F P A S Y S L D Y K K A R - I D H F H S F Q H H I - A W T T K R R A K L I T F I L S S I I . . . . . . 70493 AGAGGGAAGAATGTTGAGTTGGAAGTCTTTGGATGATAAGCAGATTCTCCTTCAAATTCC R G K N V E L E V F G - - A D S P S N S E G R M L S W K S L D D K Q I L L Q I P - R E E C - V G S L W M I S R F S F K F . . . . . . 70433 TCGCTATTTCCAAGCTTAACAGTAACCTTCAGTTTTCTATCATGAGTACTGGCACCAACA S L F P S L T V T F S F L S - V L A P T R Y F Q A - Q - P S V F Y H E Y W H Q Q L A I S K L N S N L Q F S I M S T G T N . . . . . . 70373 GTGAGAATCCACGGGGCTTCATTAGCTACAGTGCCAAGCGACGGACCGCTATTGCCTGCT V R I H G A S L A T V P S D G P L L P A - E S T G L H - L Q C Q A T D R Y C L L S E N P R G F I S Y S A K R R T A I A C . . . . . . 70313 GAGGCACTTACAAAAATACCTCTTTCTGTTGCACTGTACGTCCCGAGAGCAATACCATCA E A L T K I P L S V A L Y V P R A I P S R H L Q K Y L F L L H C T S R E Q Y H H - G T Y K N T S F C C T V R P E S N T I . . . . . . 70253 TCATGGAAAGGTTTTGTACTTCCACCAAGGGAGATTGAAAGAATATCTACACCATCATCT S W K G F V L P P R E I E R I S T P S S H G K V L Y F H Q G R L K E Y L H H H L I M E R F C T S T K G D - K N I Y T I I . . . . . . 70193 ATAGCTGCATCCATGGCAGCTAAAATATCGCTGTCAGAACAACCGCCATCAGAACTACAT I A A S M A A K I S L S E Q P P S E L H - L H P W Q L K Y R C Q N N R H Q N Y I Y S C I H G S - N I A V R T T A I R T T . . . . . . 70133 ACCTTATATACCGCTATGTGGGCTAGAGGGGCAACACCAACAGCAGTACCATTAGCATTC T L Y T A M W A R G A T P T A V P L A F P Y I P L C G L E G Q H Q Q Q Y H - H S Y L I Y R Y V G - R G N T N S S T I S I . . . . . . 70073 CCAAATATATTAGCACCTTTCACAAAGGCTCCAGCAGCTGTGCCTGCTGTATGTGTACCA P N I L A P F T K A P A A V P A V C V P Q I Y - H L S Q R L Q Q L C L L Y V Y H P K Y I S T F H K G S S S C A C C M C T . . . . . . 70013 TGTCCATTATCATCTATCGGGGAACCATTGCCAAGTTGATAAGACCTGGCTCCAATGAGC C P L S S I G E P L P S - - D L A P M S V H Y H L S G N H C Q V D K T W L Q - A M S I I I Y R G T I A K L I R P G S N E . . . . . . 69953 TTGTTGTTACACTTTGTGGTGAAATTGGACTCACAAACTCCTTTCCACTTAGCAGGCGGG L L L H F V V K L D S Q T P F H L A G G C C Y T L W - N W T H K L L S T - Q A G L V V T L C G E I G L T N S F P L S R R . . . . . . 69893 GGAGGCATCCCAACATCACTAAATGAAGGATGATCAGGAAGAATTCCAGTGTCTAGAACT G G I P T S L N E G - S G R I P V S R T E A S Q H H - M K D D Q E E F Q C L E L G R H P N I T K - R M I R K N S S V - N . . . . . . 69833 CCGATGATCACACCTACTCCAAAATTGGAATCTTTCCACAAGCCCATGTTCTGTTGCAAA P M I T P T P K L E S F H K P M F C C K R - S H L L Q N W N L S T S P C S V A N S D D H T Y S K I G I F P Q A H V L L Q . . . . . . 69773 CCAAGAAAACTTGGAGTATGAGTAGTATGCAAGGAGAAAATCCTCTGTTTCTGAGCAGAG P R K L G V - V V C K E K I L C F - A E Q E N L E Y E - Y A R R K S S V S E Q R T K K T W S M S S M Q G E N P L F L S R . . . . . . 69713 ACAAAGCCGTGTTTTTTCTCCATTTCCTTCACTTGTGCTGCAGTTAATCTTGCTGCAAAA T K P C F F S I S F T C A A V N L A A K Q S R V F S P F P S L V L Q L I L L Q N D K A V F F L H F L H L C C S - S C C K . . . . . . 69653 CCTTTCATCACATTGTGGTAGGAGTAGATCATGCTAGCAGCCTCTTCATCTCCACTCGAG P F I T L W - E - I M L A A S S S P L E L S S H C G R S R S C - Q P L H L H S S T F H H I V V G V D H A S S L F I S T R . . . . . . 69593 CTAATTGCGGTAGTAGTTTTAGGCAAAAAAGAAAGGTAATAGCTCTCTAAATCCGTTAAT L I A V V V L G K K E R - - L S K S V N - L R - - F - A K K K G N S S L N P L M A N C G S S F R Q K R K V I A L - I R - . . . . . . 69533 GATGATTGAGTAGAAATTTGGTTTTCAGGTGATTCAACATGGACTATATAAGTCTCGAGA D D - V E I W F S G D S T W T I - V S R M I E - K F G F Q V I Q H G L Y K S R D - - L S R N L V F R - F N M D Y I S L E . . . . . . 69473 TCACTCTGAATACTAGGCCTTAGGAAAGAGCAAAATATGAAGATAAGAAGAATTTTCAAG S L - I L G L R K E Q N M K I R R I F K H S E Y - A L G K S K I - R - E E F S R I T L N T R P - E R A K Y E D K K N F Q . . 69413 AATCCCATTGCTG N P I A I P L L E S H C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-15_AGS-1_PPS_1 (70388 69975) (frame '1'; 411 bp, 137 residues) 1 VLAPTVRIHG ASLATVPSDG PLLPAEALTK IPLSVALYVP RAIPSSWKGF VLPPREIERI 61 STPSSIAASM AAKISLSEQP PSELHTLYTA MWARGATPTA VPLAFPNILA PFTKAPAAVP 121 AVCVPCPLSS IGEPLPS- >C08HBa0165B06.1-_PGL-15_AGS-1_PPS_2 (71012 70764) (frame '1'; 246 bp, 82 residues) 1 GQDIEVPDTI LNVDFVFLLL STEVGQAART LTPGPIMSGF KMPGLATLGP REENEATIGA 61 FLSPITVPWK VIEATGFEDE FI- >C08HBa0165B06.1-_PGL-15_AGS-1_PPS_3 (71216 71013) (frame '1'; 201 bp, 67 residues) 1 TSPGSLALDG LTCPAPIAKR SAEMSLSSSI GLLARFTVSA VVIIADLIAA GDQSGCALFS 61 RAATPLR- 3-phase translation of AGS-1 (+strand): . . . . . . 69401 CAGCAATGGGATTCTTGAAAATTCTTCTTATCTTCATATTTTGCTCTTTCCTAAGGCCTA Q Q W D S - K F F L S S Y F A L S - G L S N G I L E N S S Y L H I L L F P K A - A M G F L K I L L I F I F C S F L R P . . . . . . 69461 GTATTCAGAGTGATCTCGAGACTTATATAGTCCATGTTGAATCACCTGAAAACCAAATTT V F R V I S R L I - S M L N H L K T K F Y S E - S R D L Y S P C - I T - K P N F S I Q S D L E T Y I V H V E S P E N Q I . . . . . . 69521 CTACTCAATCATCATTAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAACTA L L N H H - R I - R A I T F L F C L K L Y S I I I N G F R E L L P F F F A - N Y S T Q S S L T D L E S Y Y L S F L P K T . . . . . . 69581 CTACCGCAATTAGCTCGAGTGGAGATGAAGAGGCTGCTAGCATGATCTACTCCTACCACA L P Q L A R V E M K R L L A - S T P T T Y R N - L E W R - R G C - H D L L L P Q T T A I S S S G D E E A A S M I Y S Y H . . . . . . 69641 ATGTGATGAAAGGTTTTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAAA M - - K V L Q Q D - L Q H K - R K W R K C D E R F C S K I N C S T S E G N G E K N V M K G F A A R L T A A Q V K E M E K . . . . . . 69701 AACACGGCTTTGTCTCTGCTCAGAAACAGAGGATTTTCTCCTTGCATACTACTCATACTC N T A L S L L R N R G F S P C I L L I L T R L C L C S E T E D F L L A Y Y S Y S K H G F V S A Q K Q R I F S L H T T H T . . . . . . 69761 CAAGTTTTCTTGGTTTGCAACAGAACATGGGCTTGTGGAAAGATTCCAATTTTGGAGTAG Q V F L V C N R T W A C G K I P I L E - K F S W F A T E H G L V E R F Q F W S R P S F L G L Q Q N M G L W K D S N F G V . . . . . . 69821 GTGTGATCATCGGAGTTCTAGACACTGGAATTCTTCCTGATCATCCTTCATTTAGTGATG V - S S E F - T L E F F L I I L H L V M C D H R S S R H W N S S - S S F I - - C G V I I G V L D T G I L P D H P S F S D . . . . . . 69881 TTGGGATGCCTCCCCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCACAA L G C L P R L L S G K E F V S P I S P Q W D A S P A C - V E R S L - V Q F H H K V G M P P P P A K W K G V C E S N F T T . . . . . . 69941 AGTGTAACAACAAGCTCATTGGAGCCAGGTCTTATCAACTTGGCAATGGTTCCCCGATAG S V T T S S L E P G L I N L A M V P R - V - Q Q A H W S Q V L S T W Q W F P D R K C N N K L I G A R S Y Q L G N G S P I . . . . . . 70001 ATGATAATGGACATGGTACACATACAGCAGGCACAGCTGCTGGAGCCTTTGTGAAAGGTG M I M D M V H I Q Q A Q L L E P L - K V - - W T W Y T Y S R H S C W S L C E R C D D N G H G T H T A G T A A G A F V K G . . . . . . 70061 CTAATATATTTGGGAATGCTAATGGTACTGCTGTTGGTGTTGCCCCTCTAGCCCACATAG L I Y L G M L M V L L L V L P L - P T - - Y I W E C - W Y C C W C C P S S P H S A N I F G N A N G T A V G V A P L A H I . . . . . . 70121 CGGTATATAAGGTATGTAGTTCTGATGGCGGTTGTTCTGACAGCGATATTTTAGCTGCCA R Y I R Y V V L M A V V L T A I F - L P G I - G M - F - W R L F - Q R Y F S C H A V Y K V C S S D G G C S D S D I L A A . . . . . . 70181 TGGATGCAGCTATAGATGATGGTGTAGATATTCTTTCAATCTCCCTTGGTGGAAGTACAA W M Q L - M M V - I F F Q S P L V E V Q G C S Y R - W C R Y S F N L P W W K Y K M D A A I D D G V D I L S I S L G G S T . . . . . . 70241 AACCTTTCCATGATGATGGTATTGCTCTCGGGACGTACAGTGCAACAGAAAGAGGTATTT N L S M M M V L L S G R T V Q Q K E V F T F P - - W Y C S R D V Q C N R K R Y F K P F H D D G I A L G T Y S A T E R G I . . . . . . 70301 TTGTAAGTGCCTCAGCAGGCAATAGCGGTCCGTCGCTTGGCACTGTAGCTAATGAAGCCC L - V P Q Q A I A V R R L A L - L M K P C K C L S R Q - R S V A W H C S - - S P F V S A S A G N S G P S L G T V A N E A . . . . . . 70361 CGTGGATTCTCACTGTTGGTGCCAGTACTCATGATAGAAAACTGAAGGTTACTGTTAAGC R G F S L L V P V L M I E N - R L L L S V D S H C W C Q Y S - - K T E G Y C - A P W I L T V G A S T H D R K L K V T V K . . . . . . 70421 TTGGAAATAGCGAGGAATTTGAAGGAGAATCTGCTTATCATCCAAAGACTTCCAACTCAA L E I A R N L K E N L L I I Q R L P T Q W K - R G I - R R I C L S S K D F Q L N L G N S E E F E G E S A Y H P K T S N S . . . . . . 70481 CATTCTTCCCTCTATATGATGCTGGAAAGAATGAAAGTGATCAATTTAGCGCGCCTTTTT H S S L Y M M L E R M K V I N L A R L F I L P S I - C W K E - K - S I - R A F L T F F P L Y D A G K N E S D Q F S A P F . . . . . . 70541 GTAGTCCAGGCTCACTTAATGACCCTGCTATCAAAGGTAAGATAGTCTTGTGTTTGCGAA V V Q A H L M T L L S K V R - S C V C E - S R L T - - P C Y Q R - D S L V F A K C S P G S L N D P A I K G K I V L C L R . . . . . . 70601 GTATAAGTCTTCTCAGAGTTGCTCAAGGACAATCCGTAAAGGATGCTGGAGGTGTTGGCA V - V F S E L L K D N P - R M L E V L A Y K S S Q S C S R T I R K G C W R C W H S I S L L R V A Q G Q S V K D A G G V G . . . . . . 70661 TGATTCTCATCAATGAACAAGAAGAGGGTGTGACTAAATCAGCTGAAGCTCATGTCCTTC - F S S M N K K R V - L N Q L K L M S F D S H Q - T R R G C D - I S - S S C P S M I L I N E Q E E G V T K S A E A H V L . . . . . . 70721 CTGCATTGGATGTTTCAAATGCTGATGGAAAGAAAATTCTTGCCTATATGAACTCATCTT L H W M F Q M L M E R K F L P I - T H L C I G C F K C - W K E N S C L Y E L I F P A L D V S N A D G K K I L A Y M N S S . . . . . . 70781 CAAATCCGGTTGCTTCAATCACCTTCCATGGAACTGTAATTGGAGACAAAAATGCTCCTA Q I R L L Q S P S M E L - L E T K M L L K S G C F N H L P W N C N W R Q K C S Y S N P V A S I T F H G T V I G D K N A P . . . . . . 70841 TAGTTGCTTCATTTTCCTCACGAGGACCAAGCGTAGCAAGTCCTGGCATCTTAAAACCTG - L L H F P H E D Q A - Q V L A S - N L S C F I F L T R T K R S K S W H L K T - I V A S F S S R G P S V A S P G I L K P . . . . . . 70901 ACATAATCGGTCCTGGTGTTAACGTCCTTGCTGCTTGGCCTACCTCCGTGGATAACAACA T - S V L V L T S L L L G L P P W I T T H N R S W C - R P C C L A Y L R G - Q Q D I I G P G V N V L A A W P T S V D N N . . . . . . 70961 AAAACACAAAATCAACATTCAATATAGTATCCGGAACCTCAATGTCTTGCCCTCACCTTA K T Q N Q H S I - Y P E P Q C L A L T L K H K I N I Q Y S I R N L N V L P S P - K N T K S T F N I V S G T S M S C P H L . . . . . . 71021 GTGGTGTTGCAGCTCTGCTGAAGAGCGCACATCCTGATTGGTCTCCTGCAGCTATTAAGT V V L Q L C - R A H I L I G L L Q L L S W C C S S A E E R T S - L V S C S Y - V S G V A A L L K S A H P D W S P A A I K . . . . . . 71081 CAGCAATGATGACAACAGCTGACACAGTAAACCTCGCCAACAGTCCAATACTGGACGAAA Q Q - - Q Q L T Q - T S P T V Q Y W T K S N D D N S - H S K P R Q Q S N T G R K S A M M T T A D T V N L A N S P I L D E . . . . . . 71141 GGCTCATTTCTGCTGATCTCTTTGCAATGGGTGCAGGACATGTTAATCCATCGAGAGCAA G S F L L I S L Q W V Q D M L I H R E Q A H F C - S L C N G C R T C - S I E S K R L I S A D L F A M G A G H V N P S R A . . . . . . 71201 GTGATCCAGGACTAGTTTATGATACACCATTCGAGGACTACATTCCTTATTTATGTGGTT V I Q D - F M I H H S R T T F L I Y V V - S R T S L - Y T I R G L H S L F M W F S D P G L V Y D T P F E D Y I P Y L C G . . . . . . 71261 TGAACTACACAAATCGGGAGGTAGGTAAAGTGTTACAACGCAAGGTGAATTGCTCGGAGG - T T Q I G R - V K C Y N A R - I A R R E L H K S G G R - S V T T Q G E L L G G L N Y T N R E V G K V L Q R K V N C S E . . . . . . 71321 TAAAACGTATCCCTGAAGGGCAACTAAATTATCCTTCATTTTCCATCAGACTTGGATCAA - N V S L K G N - I I L H F P S D L D Q K T Y P - R A T K L S F I F H Q T W I N V K R I P E G Q L N Y P S F S I R L G S . . . . . . 71381 CTCCTCAGACATATACCAGAACCGTAACCAATGTTGGTGATGCTAAATCATCTTACAAAG L L R H I P E P - P M L V M L N H L T K S S D I Y Q N R N Q C W - C - I I L Q S T P Q T Y T R T V T N V G D A K S S Y K . . . . . . 71441 TGGAGATAGTTTCACCAAAAGGAGTTGTCGTGAAAGTTGAACCCTCCGCGCTAAATTTCT W R - F H Q K E L S - K L N P P R - I S G D S F T K R S C R E S - T L R A K F L V E I V S P K G V V V K V E P S A L N F . . . . . . 71501 CAACGTTGAACCAGAAGTTGACATATCAAGTGATATTTACCAAGACAACTAATATCTCAA Q R - T R S - H I K - Y L P R Q L I S Q N V E P E V D I S S D I Y Q D N - Y L N S T L N Q K L T Y Q V I F T K T T N I S . . . . . . 71561 CTACCAGTGATGTTGAGGGATTTTTGAAGTGGAATTCTAATAGGCACTCTGTAAGAAGTC L P V M L R D F - S G I L I G T L - E V Y Q - C - G I F E V E F - - A L C K K S T T S D V E G F L K W N S N R H S V R S . . . . . . 71621 CAATTGCAGTTAGAGTGTCTGCTGAATAAAACTAAAATGCTTTCAATCTAAAATGTAAAA Q L Q L E C L L N K T K M L S I - N V K N C S - S V C - I K L K C F Q S K M - K P I A V R V S A E - N - N A F N L K C K . . . . . . 71681 ATAAGTGCAGAAATTATTCACAATTAATCATATTGGATTGCTGTTTTTTTTTTCCAGTAT I S A E I I H N - S Y W I A V F F F Q Y - V Q K L F T I N H I G L L F F F S S I N K C R N Y S Q L I I L D C C F F F P V . . 71741 ATGTTTTATGTCA M F Y V C F M S Y V L C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-15_AGS-1_PPS_1 (69403 71649) (frame '0'; 2244 bp, 748 residues) 1 AMGFLKILLI FIFCSFLRPS IQSDLETYIV HVESPENQIS TQSSLTDLES YYLSFLPKTT 61 TAISSSGDEE AASMIYSYHN VMKGFAARLT AAQVKEMEKK HGFVSAQKQR IFSLHTTHTP 121 SFLGLQQNMG LWKDSNFGVG VIIGVLDTGI LPDHPSFSDV GMPPPPAKWK GVCESNFTTK 181 CNNKLIGARS YQLGNGSPID DNGHGTHTAG TAAGAFVKGA NIFGNANGTA VGVAPLAHIA 241 VYKVCSSDGG CSDSDILAAM DAAIDDGVDI LSISLGGSTK PFHDDGIALG TYSATERGIF 301 VSASAGNSGP SLGTVANEAP WILTVGASTH DRKLKVTVKL GNSEEFEGES AYHPKTSNST 361 FFPLYDAGKN ESDQFSAPFC SPGSLNDPAI KGKIVLCLRS ISLLRVAQGQ SVKDAGGVGM 421 ILINEQEEGV TKSAEAHVLP ALDVSNADGK KILAYMNSSS NPVASITFHG TVIGDKNAPI 481 VASFSSRGPS VASPGILKPD IIGPGVNVLA AWPTSVDNNK NTKSTFNIVS GTSMSCPHLS 541 GVAALLKSAH PDWSPAAIKS AMMTTADTVN LANSPILDER LISADLFAMG AGHVNPSRAS 601 DPGLVYDTPF EDYIPYLCGL NYTNREVGKV LQRKVNCSEV KRIPEGQLNY PSFSIRLGST 661 PQTYTRTVTN VGDAKSSYKV EIVSPKGVVV KVEPSALNFS TLNQKLTYQV IFTKTTNIST 721 TSDVEGFLKW NSNRHSVRSP IAVRVSAE- AGS-2 (71732 71242,70976 70705) SCR (e 1.000 d 0.000 a 0.000,e 1.000) Exon 1 71732 71242 ( 491 n); score: 1.000 Intron 1 71241 70977 ( 265 n); Pd: 0.000 Pa: 0.000 Exon 2 70976 70705 ( 272 n); score: 1.000 PGS (71732 71242,70976 70705) SGN-E548357+ 3-phase translation of AGS-2 (-strand): . . . . . . 71732 AAAAAAAAACAGCAATCCAATATGATTAATTGTGAATAATTTCTGCACTTATTTTTACAT K K K Q Q S N M I N C E - F L H L F L H K K N S N P I - L I V N N F C T Y F Y I K K T A I Q Y D - L - I I S A L I F T . . . . . . 71672 TTTAGATTGAAAGCATTTTAGTTTTATTCAGCAGACACTCTAACTGCAATTGGACTTCTT F R L K A F - F Y S A D T L T A I G L L L D - K H F S F I Q Q T L - L Q L D F L F - I E S I L V L F S R H S N C N W T S . . . . . . 71612 ACAGAGTGCCTATTAGAATTCCACTTCAAAAATCCCTCAACATCACTGGTAGTTGAGATA T E C L L E F H F K N P S T S L V V E I Q S A Y - N S T S K I P Q H H W - L R Y Y R V P I R I P L Q K S L N I T G S - D . . . . . . 71552 TTAGTTGTCTTGGTAAATATCACTTGATATGTCAACTTCTGGTTCAACGTTGAGAAATTT L V V L V N I T - Y V N F W F N V E K F - L S W - I S L D M S T S G S T L R N L I S C L G K Y H L I C Q L L V Q R - E I . . . . . . 71492 AGCGCGGAGGGTTCAACTTTCACGACAACTCCTTTTGGTGAAACTATCTCCACTTTGTAA S A E G S T F T T T P F G E T I S T L - A R R V Q L S R Q L L L V K L S P L C K - R G G F N F H D N S F W - N Y L H F V . . . . . . 71432 GATGATTTAGCATCACCAACATTGGTTACGGTTCTGGTATATGTCTGAGGAGTTGATCCA D D L A S P T L V T V L V Y V - G V D P M I - H H Q H W L R F W Y M S E E L I Q R - F S I T N I G Y G S G I C L R S - S . . . . . . 71372 AGTCTGATGGAAAATGAAGGATAATTTAGTTGCCCTTCAGGGATACGTTTTACCTCCGAG S L M E N E G - F S C P S G I R F T S E V - W K M K D N L V A L Q G Y V L P P S K S D G K - R I I - L P F R D T F Y L R . . . . . . 71312 CAATTCACCTTGCGTTGTAACACTTTACCTACCTCCCGATTTGTGTAGTTCAAACCACAT Q F T L R C N T L P T S R F V - F K P H N S P C V V T L Y L P P D L C S S N H I A I H L A L - H F T Y L P I C V V Q T T . . : . . . . 71252 AAATAAGGAAT : GTTGATTTTGTGTTTTTGTTGTTATCCACGGAGGTAGGCCAAGCAGCAA K - G M : L I L C F C C Y P R R - A K Q Q N K E : C - F C V F V V I H G G R P S S K - I R N : V D F V F L L L S T E V G Q A A . . . . . . 70927 GGACGTTAACACCAGGACCGATTATGTCAGGTTTTAAGATGCCAGGACTTGCTACGCTTG G R - H Q D R L C Q V L R C Q D L L R L D V N T R T D Y V R F - D A R T C Y A W R T L T P G P I M S G F K M P G L A T L . . . . . . 70867 GTCCTCGTGAGGAAAATGAAGCAACTATAGGAGCATTTTTGTCTCCAATTACAGTTCCAT V L V R K M K Q L - E H F C L Q L Q F H S S - G K - S N Y R S I F V S N Y S S M G P R E E N E A T I G A F L S P I T V P . . . . . . 70807 GGAAGGTGATTGAAGCAACCGGATTTGAAGATGAGTTCATATAGGCAAGAATTTTCTTTC G R - L K Q P D L K M S S Y R Q E F S F E G D - S N R I - R - V H I G K N F L S W K V I E A T G F E D E F I - A R I F F . . . . . 70747 CATCAGCATTTGAAACATCCAATGCAGGAAGGACATGAGCTTC H Q H L K H P M Q E G H E L I S I - N I Q C R K D M S F P S A F E T S N A G R T - A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-15_AGS-2_PPS_1 (71250 71242,70976 70764) (frame '0'; 219 bp, 73 residues) 1 IRNVDFVFLL LSTEVGQAAR TLTPGPIMSG FKMPGLATLG PREENEATIG AFLSPITVPW 61 KVIEATGFED EFI- PGL 16 (+ strand): 69416 69854 AGS-1 (69416 69854) SCR (e 1.000) Exon 1 69416 69854 ( 439 n); score: 1.000 PGS (69416 69854) SGN-E282403+ 3-phase translation of AGS-1 (+strand): . . . . . . 69416 TGAAAATTCTTCTTATCTTCATATTTTGCTCTTTCCTAAGGCCTAGTATTCAGAGTGATC - K F F L S S Y F A L S - G L V F R V I E N S S Y L H I L L F P K A - Y S E - S K I L L I F I F C S F L R P S I Q S D . . . . . . 69476 TCGAGACTTATATAGTCCATGTTGAATCACCTGAAAACCAAATTTCTACTCAATCATCAT S R L I - S M L N H L K T K F L L N H H R D L Y S P C - I T - K P N F Y S I I I L E T Y I V H V E S P E N Q I S T Q S S . . . . . . 69536 TAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAACTACTACCGCAATTAGCT - R I - R A I T F L F C L K L L P Q L A N G F R E L L P F F F A - N Y Y R N - L L T D L E S Y Y L S F L P K T T T A I S . . . . . . 69596 CGAGTGGAGATGAAGAGGCTGCTAGCATGATCTACTCCTACCACAATGTGATGAAAGGTT R V E M K R L L A - S T P T T M - - K V E W R - R G C - H D L L L P Q C D E R F S S G D E E A A S M I Y S Y H N V M K G . . . . . . 69656 TTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAAAAACACGGCTTTGTCT L Q Q D - L Q H K - R K W R K N T A L S C S K I N C S T S E G N G E K T R L C L F A A R L T A A Q V K E M E K K H G F V . . . . . . 69716 CTGCTCAGAAACAGAGGATTTTCTCCTTGCATACTACTCATACTCCAAGTTTTCTTGGTT L L R N R G F S P C I L L I L Q V F L V C S E T E D F L L A Y Y S Y S K F S W F S A Q K Q R I F S L H T T H T P S F L G . . . . . . 69776 TGCAACAGAACATGGGCTTGTGGAAAGATTCCAATTTTGGAGTAGGTGTGATCATCGGAG C N R T W A C G K I P I L E - V - S S E A T E H G L V E R F Q F W S R C D H R S L Q Q N M G L W K D S N F G V G V I I G . . 69836 TTCTAGACACTGGAATTCT F - T L E F S R H W N S V L D T G I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-16_AGS-1_PPS_1 (69418 69852) (frame '0'; 435 bp, 145 residues) 1 KILLIFIFCS FLRPSIQSDL ETYIVHVESP ENQISTQSSL TDLESYYLSF LPKTTTAISS 61 SGDEEAASMI YSYHNVMKGF AARLTAAQVK EMEKKHGFVS AQKQRIFSLH TTHTPSFLGL 121 QQNMGLWKDS NFGVGVIIGV LDTGI 3-phase translation of AGS-1 (-strand): . . . . . . 69854 AGAATTCCAGTGTCTAGAACTCCGATGATCACACCTACTCCAAAATTGGAATCTTTCCAC R I P V S R T P M I T P T P K L E S F H E F Q C L E L R - S H L L Q N W N L S T N S S V - N S D D H T Y S K I G I F P . . . . . . 69794 AAGCCCATGTTCTGTTGCAAACCAAGAAAACTTGGAGTATGAGTAGTATGCAAGGAGAAA K P M F C C K P R K L G V - V V C K E K S P C S V A N Q E N L E Y E - Y A R R K Q A H V L L Q T K K T W S M S S M Q G E . . . . . . 69734 ATCCTCTGTTTCTGAGCAGAGACAAAGCCGTGTTTTTTCTCCATTTCCTTCACTTGTGCT I L C F - A E T K P C F F S I S F T C A S S V S E Q R Q S R V F S P F P S L V L N P L F L S R D K A V F F L H F L H L C . . . . . . 69674 GCAGTTAATCTTGCTGCAAAACCTTTCATCACATTGTGGTAGGAGTAGATCATGCTAGCA A V N L A A K P F I T L W - E - I M L A Q L I L L Q N L S S H C G R S R S C - Q C S - S C C K T F H H I V V G V D H A S . . . . . . 69614 GCCTCTTCATCTCCACTCGAGCTAATTGCGGTAGTAGTTTTAGGCAAAAAAGAAAGGTAA A S S S P L E L I A V V V L G K K E R - P L H L H S S - L R - - F - A K K K G N S L F I S T R A N C G S S F R Q K R K V . . . . . . 69554 TAGCTCTCTAAATCCGTTAATGATGATTGAGTAGAAATTTGGTTTTCAGGTGATTCAACA - L S K S V N D D - V E I W F S G D S T S S L N P L M M I E - K F G F Q V I Q H I A L - I R - - - L S R N L V F R - F N . . . . . . 69494 TGGACTATATAAGTCTCGAGATCACTCTGAATACTAGGCCTTAGGAAAGAGCAAAATATG W T I - V S R S L - I L G L R K E Q N M G L Y K S R D H S E Y - A L G K S K I - M D Y I S L E I T L N T R P - E R A K Y . . 69434 AAGATAAGAAGAATTTTCA K I R R I F R - E E F S E D K K N F Maximal non-overlapping open reading frames (>= 64 codons): none PGL 17 (- strand): 73603 73540 AGS-1 (73603 73540) SCR (e 0.906) Exon 1 73603 73540 ( 64 n); score: 0.906 PGS (73603 73540) SGN-E353214- 3-phase translation of AGS-1 (-strand): . . . . . . 73603 CAATTGGACTTCTCACAGAGTGCCTATTAGAAGTCCATTTCAAGAATCCCTCAACAACAC Q L D F S Q S A Y - K S I S R I P Q Q H N W T S H R V P I R S P F Q E S L N N T I G L L T E C L L E V H F K N P S T T . 73543 TATC Y I L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 73540 GATAGTGTTGTTGAGGGATTCTTGAAATGGACTTCTAATAGGCACTCTGTGAGAAGTCCA D S V V E G F L K W T S N R H S V R S P I V L L R D S - N G L L I G T L - E V Q - C C - G I L E M D F - - A L C E K S . 73600 ATTG I L N Maximal non-overlapping open reading frames (>= 64 codons): none PGL 18 (- strand): 76892 74597 AGS-1 (76892 74597) SCR (e 0.891) Exon 1 76892 74597 (2296 n); score: 0.891 PGS (75130 74597) SGN-E207645- PGS (75121 74597) SGN-E330205- PGS (75062 74597) SGN-E207387- PGS (75392 74617) SGN-E539488- PGS (75056 74618) SGN-E282403- PGS (75716 75250) SGN-E202140- PGS (75937 75357) SGN-E244401- PGS (75917 75357) SGN-E244422- PGS (76141 75370) SGN-E540271- PGS (76025 75370) SGN-E335107- PGS (75949 75370) SGN-E286017- PGS (76011 75462) SGN-E208913- PGS (75890 75462) SGN-E208810- PGS (76208 75589) SGN-E306389- PGS (76109 75618) SGN-E210009- PGS (76302 75640) SGN-E397025- PGS (76370 75763) SGN-E308535- PGS (76139 75778) SGN-E200689- PGS (76484 75781) SGN-E212584- PGS (76456 75865) SGN-E329031- PGS (76608 75901) SGN-E213673- PGS (76588 75955) SGN-E213088- PGS (76433 76025) SGN-E317658- PGS (76818 76245) SGN-E207413- PGS (76714 76275) SGN-E287935+ PGS (76866 76458) SGN-E307529- PGS (76833 76521) SGN-E237320+ PGS (76892 76759) SGN-E353214- 3-phase translation of AGS-1 (-strand): . . . . . . 76892 TCAAATGTTTGAGTACTTTATGCAGTTATATAGCCAAATTTTCATTGGATCAACAAAAGT S N V - V L Y A V I - P N F H W I N K S Q M F E Y F M Q L Y S Q I F I G S T K V K C L S T L C S Y I A K F S L D Q Q K . . . . . . 76832 GCAATTGGACTTCTCACTGAGTGCCTATTAGAAGTCCACTTCAAGAATCCCTCAATAACC A I G L L T E C L L E V H F K N P S I T Q L D F S L S A Y - K S T S R I P Q - P C N W T S H - V P I R S P L Q E S L N N . . . . . . 76772 TCAGTGTTTGAGCTATTAGCTGTCTTGGAAAATGTCACTTGGTATGTCAACTTCTGGTTC S V F E L L A V L E N V T W Y V N F W F Q C L S Y - L S W K M S L G M S T S G S L S V - A I S C L G K C H L V C Q L L V . . . . . . 76712 AACTCGGAGAAATTTAGCTCGGAGGGTTCAACTTCGATGGCAACGCCTTCTGGTGAAGCT N S E K F S S E G S T S M A T P S G E A T R R N L A R R V Q L R W Q R L L V K L Q L G E I - L G G F N F D G N A F W - S . . . . . . 76652 ACCTCCACTTTGTAAGATGATTTAGCATCACCAACATTGGTCACAGTTCTGGTATATGTC T S T L - D D L A S P T L V T V L V Y V P P L C K M I - H H Q H W S Q F W Y M S Y L H F V R - F S I T N I G H S S G I C . . . . . . 76592 TGAGGAGTTGATCCAAGGTCGTATATGGAAAACGAAGGATAGTTTAATTGTGCTTCAAGA - G V D P R S Y M E N E G - F N C A S R E E L I Q G R I W K T K D S L I V L Q E L R S - S K V V Y G K R R I V - L C F K . . . . . . 76532 ATACTTTTCACCTCCGAGCAATTCACCTTGCGTTGTAACAGGTTACCTACCTGCCGATTT I L F T S E Q F T L R C N R L P T C R F Y F S P P S N S P C V V T G Y L P A D L N T F H L R A I H L A L - Q V T Y L P I . . . . . . 76472 GTGTAGTTCAAACCACATAAATAAGGTACATAGTCCTCGAATGGTGTATCATAAACTAGT V - F K P H K - G T - S S N G V S - T S C S S N H I N K V H S P R M V Y H K L V C V V Q T T - I R Y I V L E W C I I N - . . . . . . 76412 CCTGGATCATTTGCCCTCGATGGATTAACATGTCCTGCACCGATTGCATAAATGTCAGCA P G S F A L D G L T C P A P I A - M S A L D H L P S M D - H V L H R L H K C Q Q S W I I C P R W I N M S C T D C I N V S . . . . . . 76352 GGAAGGAGCCTTTCGTCTAGTATTGGACTGTTGGCTAGGTTTAATGTGTCAGCTGTTGTC G R S L S S S I G L L A R F N V S A V V E G A F R L V L D C W L G L M C Q L L S R K E P F V - Y W T V G - V - C V S C C . . . . . . 76292 ATCATTGCAGACTTAATAGCAGCAGGAGACCAATCAGGATGTGTGCTCTTCAGCAGAGCA I I A D L I A A G D Q S G C V L F S R A S L Q T - - Q Q E T N Q D V C S S A E Q H H C R L N S S R R P I R M C A L Q Q S . . . . . . 76232 GCTACGCCACTAAGGTGAGGGCAAGACATTGATGTGCCTGATATGATATTGAATGTGGAT A T P L R - G Q D I D V P D M I L N V D L R H - G E G K T L M C L I - Y - M W I S Y A T K V R A R H - C A - Y D I E C G . . . . . . 76172 TTGGTGTTTTTGTTATCATCCACAGAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGA L V F L L S S T E V G Q A A R I L T P G W C F C Y H P Q R - A K Q Q G Y - H Q D F G V F V I I H R G R P S S K D I N T R . . . . . . 76112 CCGATTATGTCAGGTTTCAAGATGCCAATACTAGCTCCACTTGGTCCGCGAGACGAAAAT P I M S G F K M P I L A P L G P R D E N R L C Q V S R C Q Y - L H L V R E T K M T D Y V R F Q D A N T S S T W S A R R K . . . . . . 76052 GCAGCTACTATGGGAGCATTTTTATCTCCAATTATCGTTCCTTGGAACGTGATTGTAGCA A A T M G A F L S P I I V P W N V I V A Q L L W E H F Y L Q L S F L G T - L - Q C S Y Y G S I F I S N Y R S L E R D C S . . . . . . 75992 ACAGGGTTCGATGTTGAGTTCATATAAGCAAGGATTTTTGTTCCATCTGCATCAGAAATA T G F D V E F I - A R I F V P S A S E I Q G S M L S S Y K Q G F L F H L H Q K Y N R V R C - V H I S K D F C S I C I R N . . . . . . 75932 TCCAATGCTGGAAGCACATGAGCATCGGCTGATTTAGTGACACCAGAACGCTGCTGGTTG S N A G S T - A S A D L V T P E R C W L P M L E A H E H R L I - - H Q N A A G - I Q C W K H M S I G - F S D T R T L L V . . . . . . 75872 ATTATAATCATGCCAACACCTCCAGCATCCTTTACAGCTTGCCCTTTATCAACCCTCGGA I I I M P T P P A S F T A C P L S T L G L - S C Q H L Q H P L Q L A L Y Q P S E D Y N H A N T S S I L Y S L P F I N P R . . . . . . 75812 ACTCCACCACCTGCCAAACATATGACTATCTTTCCTCTTATAACGGGATCAGTAAGTGAC T P P P A K H M T I F P L I T G S V S D L H H L P N I - L S F L L - R D Q - V T N S T T C Q T Y D Y L S S Y N G I S K - . . . . . . 75752 CCTGATCTGCAATAAGGTGTTTCAAATTCGTCACTTGCATTTTTTCCAGCATCAAATAGA P D L Q - G V S N S S L A F F P A S N R L I C N K V F Q I R H L H F F Q H Q I E P - S A I R C F K F V T C I F S S I K - . . . . . . 75692 GCGAAGAATGTTGAGTTGGAAATCTTTGGACGATAAGCAGATTCTCCTTCAAATTCCTCT A K N V E L E I F G R - A D S P S N S S R R M L S W K S L D D K Q I L L Q I P L S E E C - V G N L W T I S R F S F K F L . . . . . . 75632 CCATTTCCAAGCTTAACAGTAGCTTTTAGCTTTCTATCTTGAGTGCTAGCGCCTACTGTA P F P S L T V A F S F L S - V L A P T V H F Q A - Q - L L A F Y L E C - R L L - S I S K L N S S F - L S I L S A S A Y C . . . . . . 75572 AGAATCCACGGGGCTTCATTTCCTACTGAGCCAGTAGAAGGACCATTATTGCCGGCAGAG R I H G A S F P T E P V E G P L L P A E E S T G L H F L L S Q - K D H Y C R Q S K N P R G F I S Y - A S R R T I I A G R . . . . . . 75512 CAACTTACAAGAATACCTCTTTCTGTTGCACTATATGCCCCAAGAGCAATAGGATTACTA Q L T R I P L S V A L Y A P R A I G L L N L Q E Y L F L L H Y M P Q E Q - D Y Y A T Y K N T S F C C T I C P K S N R I T . . . . . . 75452 TAGAAATCACTCGAACCACCTCCACCAAGAGATATAGAAAGGATATCTACGCCATCATCT - K S L E P P P P R D I E R I S T P S S R N H S N H L H Q E I - K G Y L R H H L I E I T R T T S T K R Y R K D I Y A I I . . . . . . 75392 ATAGCTGCATCCATAGCAGCTAAGACATCAGTGTCAGCACAACCATCAGAATTACATACC I A A S I A A K T S V S A Q P S E L H T - L H P - Q L R H Q C Q H N H Q N Y I P Y S C I H S S - D I S V S T T I R I T Y . . . . . . 75332 TTATATACCGCTATGTGGGCAAAAGGGGCAACACCAGCAGCAGTGCCATTAGCATTACCA L Y T A M W A K G A T P A A V P L A L P Y I P L C G Q K G Q H Q Q Q C H - H Y Q L I Y R Y V G K R G N T S S S A I S I T . . . . . . 75272 AATACATTGGCACCATTCACAAACGCTCCAGCTGCTGTGCTTGCTGTGTGTGTACCATGT N T L A P F T N A P A A V L A V C V P C I H W H H S Q T L Q L L C L L C V Y H V K Y I G T I H K R S S C C A C C V C T M . . . . . . 75212 CCATCATCGTCTATCGGGGAACCATGGCCAAGTTGGTAAGACCTGGCTCCAATGAGCTTG P S S S I G E P W P S W - D L A P M S L H H R L S G N H G Q V G K T W L Q - A C S I I V Y R G T M A K L V R P G S N E L . . . . . . 75152 TTGTTACACTTGTTTGTGAAATTGGACTCACAAACTCCTTTCCACTTAGCAGGCGGAGGA L L H L F V K L D S Q T P F H L A G G G C Y T C L - N W T H K L L S T - Q A E E V V T L V C E I G L T N S F P L S R R R . . . . . . 75092 GGCATCCCAACGTCACTAAACGAAGGATGATCAGGAAGAATTCCAGTGTCTATAACTCCG G I P T S L N E G - S G R I P V S I T P A S Q R H - T K D D Q E E F Q C L - L R R H P N V T K R R M I R K N S S V Y N S . . . . . . 75032 ATAATCACGCCTTTTCCATAGTTGGAATCCTTCCATACACCCATGTTCTGCTGCAAACCA I I T P F P - L E S F H T P M F C C K P - S R L F H S W N P S I H P C S A A N Q D N H A F S I V G I L P Y T H V L L Q T . . . . . . 74972 AGAAAGCTTGAAGTATGAGTAGTATCCAAGGACAAAGTCCTCTGTTTCTGAGCGGAGACA R K L E V - V V S K D K V L C F - A E T E S L K Y E - Y P R T K S S V S E R R Q K K A - S M S S I Q G Q S P L F L S G D . . . . . . 74912 AAGCCGTGTATCTTCTCCATTTCCTTCACTTGTTCTGCAGTTAATCTTGCTGCAAACCCT K P C I F S I S F T C S A V N L A A N P S R V S S P F P S L V L Q L I L L Q T L K A V Y L L H F L H L F C S - S C C K P . . . . . . 74852 GTCATCACATTGTGATAAGAATAGATCATTGTAGCAGCCTCTTCATTTCCGCTAGAGCTG V I T L - - E - I I V A A S S F P L E L S S H C D K N R S L - Q P L H F R - S - C H H I V I R I D H C S S L F I S A R A . . . . . . 74792 ATTGCGGTAGTAGTTTTAGGCAAAAAAGAAAGGTAATAGCTATCTAAATCCGTTAACGAT I A V V V L G K K E R - - L S K S V N D L R - - F - A K K K G N S Y L N P L T M D C G S S F R Q K R K V I A I - I R - R . . . . . . 74732 GATTGAGTAGAAATTAGGCTTTCGGGGGATTCAACATGGACTAGATAAGTCTCGAGATTA D - V E I R L S G D S T W T R - V S R L I E - K L G F R G I Q H G L D K S R D Y - L S R N - A F G G F N M D - I S L E I . . . . . . 74672 CTCTGAATAGTAGGCCATGGGAAAGAGCAAAAGATGAAAACAAGAAGGATTTTCAAGAAT L - I V G H G K E Q K M K T R R I F K N S E - - A M G K S K R - K Q E G F S R I T L N S R P W E R A K D E N K K D F Q E . . 74612 CCCATGGCTTGCAAAT P M A C K P W L A N S H G L Q Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-18_AGS-1_PPS_1 (75369 74962) (frame '0'; 405 bp, 135 residues) 1 DISVSTTIRI TYLIYRYVGK RGNTSSSAIS ITKYIGTIHK RSSCCACCVC TMSIIVYRGT 61 MAKLVRPGSN ELVVTLVCEI GLTNSFPLSR RRRHPNVTKR RMIRKNSSVY NSDNHAFSIV 121 GILPYTHVLL QTKKA- >C08HBa0165B06.1-_PGL-18_AGS-1_PPS_2 (76214 75966) (frame '1'; 246 bp, 82 residues) 1 GQDIDVPDMI LNVDLVFLLS STEVGQAARI LTPGPIMSGF KMPILAPLGP RDENAATMGA 61 FLSPIIVPWN VIVATGFDVE FI- >C08HBa0165B06.1-_PGL-18_AGS-1_PPS_3 (76627 76385) (frame '2'; 240 bp, 80 residues) 1 HHQHWSQFWY MSEELIQGRI WKTKDSLIVL QEYFSPPSNS PCVVTGYLPA DLCSSNHINK 61 VHSPRMVYHK LVLDHLPSMD - >C08HBa0165B06.1-_PGL-18_AGS-1_PPS_4 (76859 76638) (frame '1'; 219 bp, 73 residues) 1 PNFHWINKSA IGLLTECLLE VHFKNPSITS VFELLAVLEN VTWYVNFWFN SEKFSSEGST 61 SMATPSGEAT STL- 3-phase translation of AGS-1 (+strand): . . . . . . 74597 ATTTGCAAGCCATGGGATTCTTGAAAATCCTTCTTGTTTTCATCTTTTGCTCTTTCCCAT I C K P W D S - K S F L F S S F A L S H F A S H G I L E N P S C F H L L L F P M L Q A M G F L K I L L V F I F C S F P . . . . . . 74657 GGCCTACTATTCAGAGTAATCTCGAGACTTATCTAGTCCATGTTGAATCCCCCGAAAGCC G L L F R V I S R L I - S M L N P P K A A Y Y S E - S R D L S S P C - I P R K P W P T I Q S N L E T Y L V H V E S P E S . . . . . . 74717 TAATTTCTACTCAATCATCGTTAACGGATTTAGATAGCTATTACCTTTCTTTTTTGCCTA - F L L N H R - R I - I A I T F L F C L N F Y S I I V N G F R - L L P F F F A - L I S T Q S S L T D L D S Y Y L S F L P . . . . . . 74777 AAACTACTACCGCAATCAGCTCTAGCGGAAATGAAGAGGCTGCTACAATGATCTATTCTT K L L P Q S A L A E M K R L L Q - S I L N Y Y R N Q L - R K - R G C Y N D L F L K T T T A I S S S G N E E A A T M I Y S . . . . . . 74837 ATCACAATGTGATGACAGGGTTTGCAGCAAGATTAACTGCAGAACAAGTGAAGGAAATGG I T M - - Q G L Q Q D - L Q N K - R K W S Q C D D R V C S K I N C R T S E G N G Y H N V M T G F A A R L T A E Q V K E M . . . . . . 74897 AGAAGATACACGGCTTTGTCTCCGCTCAGAAACAGAGGACTTTGTCCTTGGATACTACTC R R Y T A L S P L R N R G L C P W I L L E D T R L C L R S E T E D F V L G Y Y S E K I H G F V S A Q K Q R T L S L D T T . . . . . . 74957 ATACTTCAAGCTTTCTTGGTTTGCAGCAGAACATGGGTGTATGGAAGGATTCCAACTATG I L Q A F L V C S R T W V Y G R I P T M Y F K L S W F A A E H G C M E G F Q L W H T S S F L G L Q Q N M G V W K D S N Y . . . . . . 75017 GAAAAGGCGTGATTATCGGAGTTATAGACACTGGAATTCTTCCTGATCATCCTTCGTTTA E K A - L S E L - T L E F F L I I L R L K R R D Y R S Y R H W N S S - S S F V - G K G V I I G V I D T G I L P D H P S F . . . . . . 75077 GTGACGTTGGGATGCCTCCTCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCA V T L G C L L R L L S G K E F V S P I S - R W D A S S A C - V E R S L - V Q F H S D V G M P P P P A K W K G V C E S N F . . . . . . 75137 CAAACAAGTGTAACAACAAGCTCATTGGAGCCAGGTCTTACCAACTTGGCCATGGTTCCC Q T S V T T S S L E P G L T N L A M V P K Q V - Q Q A H W S Q V L P T W P W F P T N K C N N K L I G A R S Y Q L G H G S . . . . . . 75197 CGATAGACGATGATGGACATGGTACACACACAGCAAGCACAGCAGCTGGAGCGTTTGTGA R - T M M D M V H T Q Q A Q Q L E R L - D R R - W T W Y T H S K H S S W S V C E P I D D D G H G T H T A S T A A G A F V . . . . . . 75257 ATGGTGCCAATGTATTTGGTAATGCTAATGGCACTGCTGCTGGTGTTGCCCCTTTTGCCC M V P M Y L V M L M A L L L V L P L L P W C Q C I W - C - W H C C W C C P F C P N G A N V F G N A N G T A A G V A P F A . . . . . . 75317 ACATAGCGGTATATAAGGTATGTAATTCTGATGGTTGTGCTGACACTGATGTCTTAGCTG T - R Y I R Y V I L M V V L T L M S - L H S G I - G M - F - W L C - H - C L S C H I A V Y K V C N S D G C A D T D V L A . . . . . . 75377 CTATGGATGCAGCTATAGATGATGGCGTAGATATCCTTTCTATATCTCTTGGTGGAGGTG L W M Q L - M M A - I S F L Y L L V E V Y G C S Y R - W R R Y P F Y I S W W R W A M D A A I D D G V D I L S I S L G G G . . . . . . 75437 GTTCGAGTGATTTCTATAGTAATCCTATTGCTCTTGGGGCATATAGTGCAACAGAAAGAG V R V I S I V I L L L L G H I V Q Q K E F E - F L - - S Y C S W G I - C N R K R G S S D F Y S N P I A L G A Y S A T E R . . . . . . 75497 GTATTCTTGTAAGTTGCTCTGCCGGCAATAATGGTCCTTCTACTGGCTCAGTAGGAAATG V F L - V A L P A I M V L L L A Q - E M Y S C K L L C R Q - W S F Y W L S R K - G I L V S C S A G N N G P S T G S V G N . . . . . . 75557 AAGCCCCGTGGATTCTTACAGTAGGCGCTAGCACTCAAGATAGAAAGCTAAAAGCTACTG K P R G F L Q - A L A L K I E S - K L L S P V D S Y S R R - H S R - K A K S Y C E A P W I L T V G A S T Q D R K L K A T . . . . . . 75617 TTAAGCTTGGAAATGGAGAGGAATTTGAAGGAGAATCTGCTTATCGTCCAAAGATTTCCA L S L E M E R N L K E N L L I V Q R F P - A W K W R G I - R R I C L S S K D F Q V K L G N G E E F E G E S A Y R P K I S . . . . . . 75677 ACTCAACATTCTTCGCTCTATTTGATGCTGGAAAAAATGCAAGTGACGAATTTGAAACAC T Q H S S L Y L M L E K M Q V T N L K H L N I L R S I - C W K K C K - R I - N T N S T F F A L F D A G K N A S D E F E T . . . . . . 75737 CTTATTGCAGATCAGGGTCACTTACTGATCCCGTTATAAGAGGAAAGATAGTCATATGTT L I A D Q G H L L I P L - E E R - S Y V L L Q I R V T Y - S R Y K R K D S H M F P Y C R S G S L T D P V I R G K I V I C . . . . . . 75797 TGGCAGGTGGTGGAGTTCCGAGGGTTGATAAAGGGCAAGCTGTAAAGGATGCTGGAGGTG W Q V V E F R G L I K G K L - R M L E V G R W W S S E G - - R A S C K G C W R C L A G G G V P R V D K G Q A V K D A G G . . . . . . 75857 TTGGCATGATTATAATCAACCAGCAGCGTTCTGGTGTCACTAAATCAGCCGATGCTCATG L A - L - S T S S V L V S L N Q P M L M W H D Y N Q P A A F W C H - I S R C S C V G M I I I N Q Q R S G V T K S A D A H . . . . . . 75917 TGCTTCCAGCATTGGATATTTCTGATGCAGATGGAACAAAAATCCTTGCTTATATGAACT C F Q H W I F L M Q M E Q K S L L I - T A S S I G Y F - C R W N K N P C L Y E L V L P A L D I S D A D G T K I L A Y M N . . . . . . 75977 CAACATCGAACCCTGTTGCTACAATCACGTTCCAAGGAACGATAATTGGAGATAAAAATG Q H R T L L L Q S R S K E R - L E I K M N I E P C C Y N H V P R N D N W R - K C S T S N P V A T I T F Q G T I I G D K N . . . . . . 76037 CTCCCATAGTAGCTGCATTTTCGTCTCGCGGACCAAGTGGAGCTAGTATTGGCATCTTGA L P - - L H F R L A D Q V E L V L A S - S H S S C I F V S R T K W S - Y W H L E A P I V A A F S S R G P S G A S I G I L . . . . . . 76097 AACCTGACATAATCGGTCCTGGTGTTAATATCCTTGCTGCTTGGCCTACCTCTGTGGATG N L T - S V L V L I S L L L G L P L W M T - H N R S W C - Y P C C L A Y L C G - K P D I I G P G V N I L A A W P T S V D . . . . . . 76157 ATAACAAAAACACCAAATCCACATTCAATATCATATCAGGCACATCAATGTCTTGCCCTC I T K T P N P H S I S Y Q A H Q C L A L - Q K H Q I H I Q Y H I R H I N V L P S D N K N T K S T F N I I S G T S M S C P . . . . . . 76217 ACCTTAGTGGCGTAGCTGCTCTGCTGAAGAGCACACATCCTGATTGGTCTCCTGCTGCTA T L V A - L L C - R A H I L I G L L L L P - W R S C S A E E H T S - L V S C C Y H L S G V A A L L K S T H P D W S P A A . . . . . . 76277 TTAAGTCTGCAATGATGACAACAGCTGACACATTAAACCTAGCCAACAGTCCAATACTAG L S L Q - - Q Q L T H - T - P T V Q Y - - V C N D D N S - H I K P S Q Q S N T R I K S A M M T T A D T L N L A N S P I L . . . . . . 76337 ACGAAAGGCTCCTTCCTGCTGACATTTATGCAATCGGTGCAGGACATGTTAATCCATCGA T K G S F L L T F M Q S V Q D M L I H R R K A P S C - H L C N R C R T C - S I E D E R L L P A D I Y A I G A G H V N P S . . . . . . 76397 GGGCAAATGATCCAGGACTAGTTTATGATACACCATTCGAGGACTATGTACCTTATTTAT G Q M I Q D - F M I H H S R T M Y L I Y G K - S R T S L - Y T I R G L C T L F M R A N D P G L V Y D T P F E D Y V P Y L . . . . . . 76457 GTGGTTTGAACTACACAAATCGGCAGGTAGGTAACCTGTTACAACGCAAGGTGAATTGCT V V - T T Q I G R - V T C Y N A R - I A W F E L H K S A G R - P V T T Q G E L L C G L N Y T N R Q V G N L L Q R K V N C . . . . . . 76517 CGGAGGTGAAAAGTATTCTTGAAGCACAATTAAACTATCCTTCGTTTTCCATATACGACC R R - K V F L K H N - T I L R F P Y T T G G E K Y S - S T I K L S F V F H I R P S E V K S I L E A Q L N Y P S F S I Y D . . . . . . 76577 TTGGATCAACTCCTCAGACATATACCAGAACTGTGACCAATGTTGGTGATGCTAAATCAT L D Q L L R H I P E L - P M L V M L N H W I N S S D I Y Q N C D Q C W - C - I I L G S T P Q T Y T R T V T N V G D A K S . . . . . . 76637 CTTACAAAGTGGAGGTAGCTTCACCAGAAGGCGTTGCCATCGAAGTTGAACCCTCCGAGC L T K W R - L H Q K A L P S K L N P P S L Q S G G S F T R R R C H R S - T L R A S Y K V E V A S P E G V A I E V E P S E . . . . . . 76697 TAAATTTCTCCGAGTTGAACCAGAAGTTGACATACCAAGTGACATTTTCCAAGACAGCTA - I S P S - T R S - H T K - H F P R Q L K F L R V E P E V D I P S D I F Q D S - L N F S E L N Q K L T Y Q V T F S K T A . . . . . . 76757 ATAGCTCAAACACTGAGGTTATTGAGGGATTCTTGAAGTGGACTTCTAATAGGCACTCAG I A Q T L R L L R D S - S G L L I G T Q - L K H - G Y - G I L E V D F - - A L S N S S N T E V I E G F L K W T S N R H S . . . . . . 76817 TGAGAAGTCCAATTGCACTTTTGTTGATCCAATGAAAATTTGGCTATATAACTGCATAAA - E V Q L H F C - S N E N L A I - L H K E K S N C T F V D P M K I W L Y N C I K V R S P I A L L L I Q - K F G Y I T A - . . 76877 GTACTCAAACATTTGA V L K H L Y S N I - S T Q T F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-18_AGS-1_PPS_1 (74599 76851) (frame '0'; 2250 bp, 750 residues) 1 LQAMGFLKIL LVFIFCSFPW PTIQSNLETY LVHVESPESL ISTQSSLTDL DSYYLSFLPK 61 TTTAISSSGN EEAATMIYSY HNVMTGFAAR LTAEQVKEME KIHGFVSAQK QRTLSLDTTH 121 TSSFLGLQQN MGVWKDSNYG KGVIIGVIDT GILPDHPSFS DVGMPPPPAK WKGVCESNFT 181 NKCNNKLIGA RSYQLGHGSP IDDDGHGTHT ASTAAGAFVN GANVFGNANG TAAGVAPFAH 241 IAVYKVCNSD GCADTDVLAA MDAAIDDGVD ILSISLGGGG SSDFYSNPIA LGAYSATERG 301 ILVSCSAGNN GPSTGSVGNE APWILTVGAS TQDRKLKATV KLGNGEEFEG ESAYRPKISN 361 STFFALFDAG KNASDEFETP YCRSGSLTDP VIRGKIVICL AGGGVPRVDK GQAVKDAGGV 421 GMIIINQQRS GVTKSADAHV LPALDISDAD GTKILAYMNS TSNPVATITF QGTIIGDKNA 481 PIVAAFSSRG PSGASIGILK PDIIGPGVNI LAAWPTSVDD NKNTKSTFNI ISGTSMSCPH 541 LSGVAALLKS THPDWSPAAI KSAMMTTADT LNLANSPILD ERLLPADIYA IGAGHVNPSR 601 ANDPGLVYDT PFEDYVPYLC GLNYTNRQVG NLLQRKVNCS EVKSILEAQL NYPSFSIYDL 661 GSTPQTYTRT VTNVGDAKSS YKVEVASPEG VAIEVEPSEL NFSELNQKLT YQVTFSKTAN 721 SSNTEVIEGF LKWTSNRHSV RSPIALLLIQ - AGS-2 (76833 76448,76182 75907) SCR (e 0.878 d 0.831 a 0.000,e 0.851) Exon 1 76833 76448 ( 386 n); score: 0.878 Intron 1 76447 76183 ( 265 n); Pd: 0.831 Pa: 0.000 Exon 2 76182 75907 ( 276 n); score: 0.851 PGS (76833 76448,76182 75907) SGN-E548357+ 3-phase translation of AGS-2 (-strand): . . . . . . 76833 TGCAATTGGACTTCTCACTGAGTGCCTATTAGAAGTCCACTTCAAGAATCCCTCAATAAC C N W T S H - V P I R S P L Q E S L N N A I G L L T E C L L E V H F K N P S I T Q L D F S L S A Y - K S T S R I P Q - . . . . . . 76773 CTCAGTGTTTGAGCTATTAGCTGTCTTGGAAAATGTCACTTGGTATGTCAACTTCTGGTT L S V - A I S C L G K C H L V C Q L L V S V F E L L A V L E N V T W Y V N F W F P Q C L S Y - L S W K M S L G M S T S G . . . . . . 76713 CAACTCGGAGAAATTTAGCTCGGAGGGTTCAACTTCGATGGCAACGCCTTCTGGTGAAGC Q L G E I - L G G F N F D G N A F W - S N S E K F S S E G S T S M A T P S G E A S T R R N L A R R V Q L R W Q R L L V K . . . . . . 76653 TACCTCCACTTTGTAAGATGATTTAGCATCACCAACATTGGTCACAGTTCTGGTATATGT Y L H F V R - F S I T N I G H S S G I C T S T L - D D L A S P T L V T V L V Y V L P P L C K M I - H H Q H W S Q F W Y M . . . . . . 76593 CTGAGGAGTTGATCCAAGGTCGTATATGGAAAACGAAGGATAGTTTAATTGTGCTTCAAG L R S - S K V V Y G K R R I V - L C F K - G V D P R S Y M E N E G - F N C A S R S E E L I Q G R I W K T K D S L I V L Q . . . . . . 76533 AATACTTTTCACCTCCGAGCAATTCACCTTGCGTTGTAACAGGTTACCTACCTGCCGATT N T F H L R A I H L A L - Q V T Y L P I I L F T S E Q F T L R C N R L P T C R F E Y F S P P S N S P C V V T G Y L P A D . . . : . . . 76473 TGTGTAGTTCAAACCACATAAATAAG : GAATGTGGATTTGGTGTTTTTGTTATCATCCACA C V V Q T T - I R : N V D L V F L L S S T V - F K P H K - : G M W I W C F C Y H P Q L C S S N H I N K : E C G F G V F V I I H . . . . . . 76148 GAGGTAGGCCAAGCAGCAAGGATATTAACACCAGGACCGATTATGTCAGGTTTCAAGATG E V G Q A A R I L T P G P I M S G F K M R - A K Q Q G Y - H Q D R L C Q V S R C R G R P S S K D I N T R T D Y V R F Q D . . . . . . 76088 CCAATACTAGCTCCACTTGGTCCGCGAGACGAAAATGCAGCTACTATGGGAGCATTTTTA P I L A P L G P R D E N A A T M G A F L Q Y - L H L V R E T K M Q L L W E H F Y A N T S S T W S A R R K C S Y Y G S I F . . . . . . 76028 TCTCCAATTATCGTTCCTTGGAACGTGATTGTAGCAACAGGGTTCGATGTTGAGTTCATA S P I I V P W N V I V A T G F D V E F I L Q L S F L G T - L - Q Q G S M L S S Y I S N Y R S L E R D C S N R V R C - V H . . . . . . 75968 TAAGCAAGGATTTTTGTTCCATCTGCATCAGAAATATCCAATGCTGGAAGCACATGAGCA - A R I F V P S A S E I S N A G S T - A K Q G F L F H L H Q K Y P M L E A H E H I S K D F C S I C I R N I Q C W K H M S . 75908 TC I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-18_AGS-2_PPS_1 (76627 76448,76182 75976) (frame '0'; 384 bp, 128 residues) 1 HHQHWSQFWY MSEELIQGRI WKTKDSLIVL QEYFSPPSNS PCVVTGYLPA DLCSSNHINK 61 ECGFGVFVII HRGRPSSKDI NTRTDYVRFQ DANTSSTWSA RRKCSYYGSI FISNYRSLER 121 DCSNRVRC- >C08HBa0165B06.1-_PGL-18_AGS-2_PPS_2 (76832 76638) (frame '2'; 192 bp, 64 residues) 1 AIGLLTECLL EVHFKNPSIT SVFELLAVLE NVTWYVNFWF NSEKFSSEGS TSMATPSGEA 61 TSTL- PGL 19 (+ strand): 81792 84740 AGS-1 (81792 82091,82381 82407,83048 83120,83232 83366,83661 83860,84364 84740) SCR (e 1.000 d 0.999 a 0.991,e 1.000 d 0.967 a 0.956,e 1.000 d 0.000 a 0.990,e 1.000 d 0.993 a 0.807,e 0.988 d 0.981 a 0.994,e 1.000) Exon 1 81792 82091 ( 300 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 Pa: 0.991 Exon 2 82381 82407 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 Pa: 0.956 Exon 3 83048 83120 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 Pa: 0.990 Exon 4 83232 83366 ( 135 n); score: 1.000 Intron 4 83367 83660 ( 294 n); Pd: 0.993 Pa: 0.807 Exon 5 83661 83860 ( 200 n); score: 0.988 Intron 5 83861 84363 ( 503 n); Pd: 0.981 Pa: 0.994 Exon 6 84364 84740 ( 377 n); score: 1.000 PGS (81792 82091,82381 82407,83048 83120,83232 83264) SGN-E280646+ PGS (81805 82091,82381 82407,83048 83120,83232 83366,83661 83859) SGN-E341939+ PGS (81821 82091,82381 82407,83048 83120,83232 83366,83661 83676) SGN-E329759+ PGS (81844 82091,82381 82407,83048 83120,83232 83366,83661 83711) SGN-E251505+ PGS (81852 82091,82381 82407,83048 83120,83232 83366,83661 83749) SGN-E306307+ PGS (81859 82091,82381 82407,83048 83120,83232 83366,83661 83675) SGN-E257746+ PGS (81859 82091,82381 82407,83048 83120,83232 83349) SGN-E259961+ PGS (81862 82091,82381 82407,83048 83120,83232 83366,83661 83755) SGN-E274956+ PGS (83691 83860,84364 84733) SGN-E242952- PGS (83789 83860,84364 84740) SGN-E219098- PGS (83826 83860,84364 84733) SGN-E240522- 3-phase translation of AGS-1 (+strand): . . . . . . 81792 TCTTCTCTATGACCAAAACTCTGAATATAAAAAGAGTAAAAAAAAATGGCATTTTTGAGG S S L - P K L - I - K E - K K M A F L R L L Y D Q N S E Y K K S K K K W H F - G F S M T K T L N I K R V K K N G I F E . . . . . . 81852 TCCATTGTGACTGCAAAAACTACCGCCATTGCTGCTGCTATTCCAGCTGCTGCTTTTGCT S I V T A K T T A I A A A I P A A A F A P L - L Q K L P P L L L L F Q L L L L L V H C D C K N Y R H C C C Y S S C C F C . . . . . . 81912 GTTTCTTCTATTTCTTCTTCTTCGCAGTTTGAACGTCCGTTGAAAAATCTAAAATTTGGC V S S I S S S S Q F E R P L K N L K F G F L L F L L L R S L N V R - K I - N L A C F F Y F F F F A V - T S V E K S K I W . . . . . . 81972 TCAATTTCTAGTTCGAATTCGATTCTCCAATTAAGCTTCGCGAAGAATCTACAAAAAAAG S I S S S N S I L Q L S F A K N L Q K K Q F L V R I R F S N - A S R R I Y K K R L N F - F E F D S P I K L R E E S T K K . . . . . . : 82032 AGTCCTCCTTCAGCTCTTCATATGGAAACGCATTCTTCAAATCACCAAACTTCCTCCGAT : S P P S A L H M E T H S S N H Q T S S D : V L L Q L F I W K R I L Q I T K L P P I : E S S F S S S Y G N A F F K S P N F L R : . . . : . . . 82381 AATGGAGTCGTTTTGCCTGAGTTGCTG : ACAGAGTTTATGGTGGATATGTCGTGTCAAGGC N G V V L P E L L : T E F M V D M S C Q G M E S F C L S C - : Q S L W W I C R V K A - W S R F A - V A : D R V Y G G Y V V S R . . . . : . . 83081 TGTGTTAGTGCTGTCAAGAGCAAATTGCAAACCGTAGAAG : GAGTCAAGAATGTAGATGTG C V S A V K S K L Q T V E : G V K N V D V V L V L S R A N C K P - K : E S R M - M W L C - C C Q E Q I A N R R R : S Q E C R C . . . . . . 83252 GATCTTGATAATCAAGTAGTGAGAATTCTTGGATCTTCACCTGTGAAGACAATGACTGAA D L D N Q V V R I L G S S P V K T M T E I L I I K - - E F L D L H L - R Q - L K G S - - S S S E N S W I F T C E D N D - . . . . . . : 83312 GCCTTGGAGCAAACAGGTCGAAAAGCCCGTCTGATTGGGCAAGGAGTACCGGATG : ATTTC A L E Q T G R K A R L I G Q G V P D : D F P W S K Q V E K P V - L G K E Y R M : I S S L G A N R S K S P S D W A R S T G - : F . . . . . . 83666 CTTATATCTGCTGCCGTTGCCGAATTCAAAGGACCAGATATTTTTGGTGTTGTTCGCTTG L I S A A V A E F K G P D I F G V V R L L Y L L P L P N S K D Q I F L V L F A W P Y I C C R C R I Q R T R Y F W C C S L . . . . . . 83726 GCTCAAGTCAATATGGAATTAACTAGGATTGAAGCAAACTTCAGTGGCCTGTCACCTGGG A Q V N M E L T R I E A N F S G L S P G L K S I W N - L G L K Q T S V A C H L G G S S Q Y G I N - D - S K L Q W P V T W . . . . . . 83786 AAGCATGCTTGGTCTATTAATGAATTTGGTGATTTGACGAGGGGGGCAGCTAGTACTGGA K H A W S I N E F G D L T R G A A S T G S M L G L L M N L V I - R G G Q L V L E E A C L V Y - - I W - F D E G G S - Y W . . : . . . . 83846 AAATTGTACAGCCTA : CCACTCGGTGACCTGGGAACACTGGATGTTGACGAGAAAGGAGAG K L Y S L : P L G D L G T L D V D E K G E N C T A Y : H S V T W E H W M L T R K E R K I V Q P : T T R - P G N T G C - R E R R . . . . . . 84409 GCATTTTATTCCGGTCCTAAAGAGAAGCTGAGAGTTGCTGACCTGATTGGGAGAGCTATT A F Y S G P K E K L R V A D L I G R A I H F I P V L K R S - E L L T - L G E L L G I L F R S - R E A E S C - P D W E S Y . . . . . . 84469 GCTGTATATGCTACTGAAGATAAATCAGACCCAGGACTTACAGCAGCAGTGATAGCTAGA A V Y A T E D K S D P G L T A A V I A R L Y M L L K I N Q T Q D L Q Q Q - - L E C C I C Y - R - I R P R T Y S S S D S - . . . . . . 84529 AGTGCCGGGGTTGGTGAGAACTACAAGAAGCTTTGCACTTGTGATGGTACAACTATCTGG S A G V G E N Y K K L C T C D G T T I W V P G L V R T T R S F A L V M V Q L S G K C R G W - E L Q E A L H L - W Y N Y L . . . . . . 84589 GAAGCAACCAGCAAAATCTGAACAGTTTATTATCTTTAGAATCATTTGATCATTGTATAC E A T S K I - T V Y Y L - N H L I I V Y K Q P A K S E Q F I I F R I I - S L Y T G S N Q Q N L N S L L S L E S F D H C I . . . . . . 84649 TACTACGTCTGTATCATTCACATTCATGATGCTTTTAAGTTGGATGGACAAGCTAATGTA Y Y V C I I H I H D A F K L D G Q A N V T T S V S F T F M M L L S W M D K L M Y L L R L Y H S H S - C F - V G W T S - C . . . . 84709 TCAAAAATAAATGTAATCATTTGTTGCTCTCA S K I N V I I C C S Q K - M - S F V A L I K N K C N H L L L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-19_AGS-1_PPS_1 (81831 82091,82381 82407,83048 83120,83232 83366,83661 83860,84364 84609) (frame '1'; 939 bp, 313 residues) 1 KKMAFLRSIV TAKTTAIAAA IPAAAFAVSS ISSSSQFERP LKNLKFGSIS SSNSILQLSF 61 AKNLQKKSPP SALHMETHSS NHQTSSDNGV VLPELLTEFM VDMSCQGCVS AVKSKLQTVE 121 GVKNVDVDLD NQVVRILGSS PVKTMTEALE QTGRKARLIG QGVPDDFLIS AAVAEFKGPD 181 IFGVVRLAQV NMELTRIEAN FSGLSPGKHA WSINEFGDLT RGAASTGKLY SLPLGDLGTL 241 DVDEKGEAFY SGPKEKLRVA DLIGRAIAVY ATEDKSDPGL TAAVIARSAG VGENYKKLCT 301 CDGTTIWEAT SKI- AGS-2 (81858 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84740) SCR (e 1.000 d 0.999 a 0.991,e 1.000 d 0.967 a 0.956,e 1.000 d 0.000 a 0.990,e 0.985 d 0.993 a 0.000,e 1.000 d 0.981 a 0.994,e 1.000) Exon 1 81858 82091 ( 234 n); score: 1.000 Intron 1 82092 82380 ( 289 n); Pd: 0.999 Pa: 0.991 Exon 2 82381 82407 ( 27 n); score: 1.000 Intron 2 82408 83047 ( 640 n); Pd: 0.967 Pa: 0.956 Exon 3 83048 83120 ( 73 n); score: 1.000 Intron 3 83121 83231 ( 111 n); Pd: 0.000 Pa: 0.990 Exon 4 83232 83366 ( 135 n); score: 0.985 Intron 4 83367 83744 ( 378 n); Pd: 0.993 Pa: 0.000 Exon 5 83745 83860 ( 116 n); score: 1.000 Intron 5 83861 84363 ( 503 n); Pd: 0.981 Pa: 0.994 Exon 6 84364 84740 ( 377 n); score: 1.000 PGS (81858 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84553) SGN-E549093+ PGS (81859 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84482) SGN-E306718+ PGS (83048 83120,83232 83366,83745 83860,84364 84740) SGN-E544746- 3-phase translation of AGS-2 (+strand): . . . . . . 81858 GTGACTGCAAAAACTACCGCCATTGCTGCTGCTATTCCAGCTGCTGCTTTTGCTGTTTCT V T A K T T A I A A A I P A A A F A V S - L Q K L P P L L L L F Q L L L L L F L D C K N Y R H C C C Y S S C C F C C F . . . . . . 81918 TCTATTTCTTCTTCTTCGCAGTTTGAACGTCCGTTGAAAAATCTAAAATTTGGCTCAATT S I S S S S Q F E R P L K N L K F G S I L F L L L R S L N V R - K I - N L A Q F F Y F F F F A V - T S V E K S K I W L N . . . . . . 81978 TCTAGTTCGAATTCGATTCTCCAATTAAGCTTCGCGAAGAATCTACAAAAAAAGAGTCCT S S S N S I L Q L S F A K N L Q K K S P L V R I R F S N - A S R R I Y K K R V L F - F E F D S P I K L R E E S T K K E S . . . . . . : 82038 CCTTCAGCTCTTCATATGGAAACGCATTCTTCAAATCACCAAACTTCCTCCGAT : AATGGA P S A L H M E T H S S N H Q T S S D : N G L Q L F I W K R I L Q I T K L P P I : M E S F S S S Y G N A F F K S P N F L R : - W . . . : . . . 82387 GTCGTTTTGCCTGAGTTGCTG : ACAGAGTTTATGGTGGATATGTCGTGTCAAGGCTGTGTT V V L P E L L : T E F M V D M S C Q G C V S F C L S C - : Q S L W W I C R V K A V L S R F A - V A : D R V Y G G Y V V S R L C . . . . : . . 83087 AGTGCTGTCAAGAGCAAATTGCAAACCGTAGAAG : GAGTCAAGAATGTAGATGTGGATCTT S A V K S K L Q T V E : G V K N V D V D L V L S R A N C K P - K : E S R M - M W I L - C C Q E Q I A N R R R : S Q E C R C G S . . . . . . 83258 GATAATCAAGTAGTGAGAATTCTTGGATCTTCACCTGTGAAGACAATGACTGAAGCCTTG D N Q V V R I L G S S P V K T M T E A L I I K - - E F L D L H L - R Q - L K P W - - S S S E N S W I F T C E D N D - S L . . . . . : . 83318 GAGCAAACAGGTCGAAAAGCCCGTCTGATTGGGCAAGGAGTACCGGATG : TAACTAGGATT E Q T G R K A R L I G Q G V P D : V T R I S K Q V E K P V - L G K E Y R M : - L G L G A N R S K S P S D W A R S T G C : N - D . . . . . . 83756 GAAGCAAACTTCAGTGGCCTGTCACCTGGGAAGCATGCTTGGTCTATTAATGAATTTGGT E A N F S G L S P G K H A W S I N E F G K Q T S V A C H L G S M L G L L M N L V - S K L Q W P V T W E A C L V Y - - I W . . . . . : . 83816 GATTTGACGAGGGGGGCAGCTAGTACTGGAAAATTGTACAGCCTA : CCACTCGGTGACCTG D L T R G A A S T G K L Y S L : P L G D L I - R G G Q L V L E N C T A Y : H S V T W - F D E G G S - Y W K I V Q P : T T R - P . . . . . . 84379 GGAACACTGGATGTTGACGAGAAAGGAGAGGCATTTTATTCCGGTCCTAAAGAGAAGCTG G T L D V D E K G E A F Y S G P K E K L E H W M L T R K E R H F I P V L K R S - G N T G C - R E R R G I L F R S - R E A . . . . . . 84439 AGAGTTGCTGACCTGATTGGGAGAGCTATTGCTGTATATGCTACTGAAGATAAATCAGAC R V A D L I G R A I A V Y A T E D K S D E L L T - L G E L L L Y M L L K I N Q T E S C - P D W E S Y C C I C Y - R - I R . . . . . . 84499 CCAGGACTTACAGCAGCAGTGATAGCTAGAAGTGCCGGGGTTGGTGAGAACTACAAGAAG P G L T A A V I A R S A G V G E N Y K K Q D L Q Q Q - - L E V P G L V R T T R S P R T Y S S S D S - K C R G W - E L Q E . . . . . . 84559 CTTTGCACTTGTGATGGTACAACTATCTGGGAAGCAACCAGCAAAATCTGAACAGTTTAT L C T C D G T T I W E A T S K I - T V Y F A L V M V Q L S G K Q P A K S E Q F I A L H L - W Y N Y L G S N Q Q N L N S L . . . . . . 84619 TATCTTTAGAATCATTTGATCATTGTATACTACTACGTCTGTATCATTCACATTCATGAT Y L - N H L I I V Y Y Y V C I I H I H D I F R I I - S L Y T T T S V S F T F M M L S L E S F D H C I L L R L Y H S H S - . . . . . . 84679 GCTTTTAAGTTGGATGGACAAGCTAATGTATCAAAAATAAATGTAATCATTTGTTGCTCT A F K L D G Q A N V S K I N V I I C C S L L S W M D K L M Y Q K - M - S F V A L C F - V G W T S - C I K N K C N H L L L . 84739 CA S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-19_AGS-2_PPS_1 (81858 82091,82381 82407,83048 83120,83232 83366,83745 83860,84364 84609) (frame '1'; 828 bp, 276 residues) 1 VTAKTTAIAA AIPAAAFAVS SISSSSQFER PLKNLKFGSI SSSNSILQLS FAKNLQKKSP 61 PSALHMETHS SNHQTSSDNG VVLPELLTEF MVDMSCQGCV SAVKSKLQTV EGVKNVDVDL 121 DNQVVRILGS SPVKTMTEAL EQTGRKARLI GQGVPDVTRI EANFSGLSPG KHAWSINEFG 181 DLTRGAASTG KLYSLPLGDL GTLDVDEKGE AFYSGPKEKL RVADLIGRAI AVYATEDKSD 241 PGLTAAVIAR SAGVGENYKK LCTCDGTTIW EATSKI- AGS-3 (82659 82807,83052 83120,83232 83366,83661 83851) SCR (e 0.973 d 0.226 a 0.000,e 0.986 d 0.000 a 0.990,e 0.993 d 0.993 a 0.807,e 0.990) Exon 1 82659 82807 ( 149 n); score: 0.973 Intron 1 82808 83051 ( 244 n); Pd: 0.226 Pa: 0.000 Exon 2 83052 83120 ( 69 n); score: 0.986 Intron 2 83121 83231 ( 111 n); Pd: 0.000 Pa: 0.990 Exon 3 83232 83366 ( 135 n); score: 0.993 Intron 3 83367 83660 ( 294 n); Pd: 0.993 Pa: 0.807 Exon 4 83661 83851 ( 191 n); score: 0.990 PGS (82659 82807,83052 83120,83232 83366,83661 83851) SGN-E201842+ 3-phase translation of AGS-3 (+strand): . . . . . . 82659 TAACATCTTCTGTTAGAAGAGAGGACAAGAGCCCTTATATAATGCTACTACAAACAATAT - H L L L E E R T R A L I - C Y Y K Q Y N I F C - K R G Q E P L Y N A T T N N I T S S V R R E D K S P Y I M L L Q T I . . . . . . 82719 TCATTTGTCAATAAAAAATCTGTAGCTCTGCTTTTGAATTATATTGCCGATAACACGTGA S F V N K K S V A L L L N Y I A D N T - H L S I K N L - L C F - I I L P I T R D F I C Q - K I C S S A F E L Y C R - H V . . . : . . . 82779 CGGTTTTTTCTCCTTGATCAATTGCTGAG : AGTTTATGGTGGATATGTCGTGTCAAGGCTG R F F L L D Q L L R : V Y G G Y V V S R L G F F S L I N C - : E F M V D M S C Q G C T V F S P - S I A E : S L W W I C R V K A . . . . : . . 83083 TGTTAGTGCTGTCAAGAGCAAATTGCAAACCGTAGAAG : GAGTCAAGAATGTAGATGTGGA C - C C Q E Q I A N R R R : S Q E C R C G V S A V K S K L Q T V E : G V K N V D V D V L V L S R A N C K P - K : E S R M - M W . . . . . . 83254 TCTTGATAATCAAGTAGTGAGAATTCTTGGATCTTCACCTGTGAAGACAATGACTGAAGC S - - S S S E N S W I F T C E D N D - S L D N Q V V R I L G S S P V K T M T E A I L I I K - - E F L D L H L - R Q - L K . . . . . . : 83314 CTTGGAGCAAACAGGTCGAAAAGCCCGTCTGATTGGGCAAGGAGTACCGGATG : ATTTCCT L G A N R S K S P S D W A R S T G - : F P L E Q T G R K A R L I G Q G V P D : D F L P W S K Q V E K P V - L G K E Y R M : I S . . . . . . 83668 TATATCTGCTGCCGTTGCCGAATTCAAAGGACCAGATATTTTTGGTGTTGTTCGCTTGGC Y I C C R C R I Q R T R Y F W C C S L G I S A A V A E F K G P D I F G V V R L A L Y L L P L P N S K D Q I F L V L F A W . . . . . . 83728 TCAAGTCAATATGGAATTAACTAGGATTGAAGCAAACTTCAGTGGCCTGTCACCTGGGAA S S Q Y G I N - D - S K L Q W P V T W E Q V N M E L T R I E A N F S G L S P G K L K S I W N - L G L K Q T S V A C H L G . . . . . . 83788 GCATGCTTGGTCTATTAATGAATTTGGTGATTTGACGAGGGGGGCAGCTAGTACTGGAAA A C L V Y - - I W - F D E G G S - Y W K H A W S I N E F G D L T R G A A S T G K S M L G L L M N L V I - R G G Q L V L E . 83848 ATTG I L N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-19_AGS-3_PPS_1 (82807 82807,83052 83120,83232 83366,83661 83851) (frame '2'; 396 bp, 132 residues) 1 EFMVDMSCQG CVSAVKSKLQ TVEGVKNVDV DLDNQVVRIL GSSPVKTMTE ALEQTGRKAR 61 LIGQGVPDDF LISAAVAEFK GPDIFGVVRL AQVNMELTRI EANFSGLSPG KHAWSINEFG 121 DLTRGAASTG KL PGL 20 (- strand): 91450 84408 AGS-1 (88450 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85841,85342 84408) SCR (e 1.000 d 0.959 a 0.956,e 1.000 d 0.977 a 0.997,e 1.000 d 0.802 a 0.990,e 1.000 d 0.993 a 0.990,e 1.000 d 0.000 a 0.999,e 1.000 d 0.825 a 0.993,e 1.000) Exon 1 88450 88217 ( 234 n); score: 1.000 Intron 1 88216 87690 ( 527 n); Pd: 0.959 Pa: 0.956 Exon 2 87689 87584 ( 106 n); score: 1.000 Intron 2 87583 87065 ( 519 n); Pd: 0.977 Pa: 0.997 Exon 3 87064 86987 ( 78 n); score: 1.000 Intron 3 86986 86717 ( 270 n); Pd: 0.802 Pa: 0.990 Exon 4 86716 86624 ( 93 n); score: 1.000 Intron 4 86623 86484 ( 140 n); Pd: 0.993 Pa: 0.990 Exon 5 86483 86391 ( 93 n); score: 1.000 Intron 5 86390 85940 ( 451 n); Pd: 0.000 Pa: 0.999 Exon 6 85939 85841 ( 99 n); score: 1.000 Intron 6 85840 85343 ( 498 n); Pd: 0.825 Pa: 0.993 Exon 7 85342 84408 ( 935 n); score: 1.000 PGS (84739 84408) SGN-E219510+ PGS (84740 84486) SGN-E277119+ PGS (86629 86624,86483 86391,85939 85841,85342 84724) SGN-E552703+ PGS (86483 86391,85939 85841,85342 84815) SGN-E556212+ PGS (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85841,85342 85150) SGN-E264071+ PGS (88338 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85861) SGN-E258195+ PGS (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) SGN-E254685+ PGS (88338 88217,87689 87584,87064 86987,86716 86624,86483 86389) SGN-E254686+ PGS (88390 88217,87689 87584,87064 86987,86716 86624,86483 86426) SGN-E200587+ PGS (88338 88217,87689 87584,87064 86987,86716 86624,86483 86426) SGN-E254683+ PGS (88434 88217,87689 87584,87064 86987,86716 86624,86483 86439) SGN-E550949+ PGS (88433 88217,87689 87584,87064 86987,86716 86632) SGN-E254525+ PGS (88346 88217,87689 87584,87064 86987,86716 86632) SGN-E256206+ PGS (88435 88217,87689 87584,87064 86987,86716 86690) SGN-E209368+ PGS (88450 88217,87689 87584,87064 86989) SGN-E297538+ 3-phase translation of AGS-1 (-strand): . . . . . . 88450 GAAAATGAGAGTAACAGTGCCACGTTTTGGACTTCCATTCTTGAAACCTCTCTATGAATT E N E S N S A T F W T S I L E T S L - I K M R V T V P R F G L P F L K P L Y E F K - E - Q C H V L D F H S - N L S M N . . . . . . 88390 CCCCTTTTCCTCTTCTTCTTCAAACCTTTGGCCCAGAAATTGTTCTGGAAGCTTCTCTGT P L F L F F F K P L A Q K L F W K L L C P F S S S S S N L W P R N C S G S F S V S P F P L L L Q T F G P E I V L E A S L . . . . . . 88330 AAAAATGTCAACAACCCCACCTTCTCAAATCGCTGACATCATCAATCTCCCCACCCAACT K N V N N P T F S N R - H H Q S P H P T K M S T T P P S Q I A D I I N L P T Q L - K C Q Q P H L L K S L T S S I S P P N . . . . . . : 88270 CGACCAACCGGTTTCTGTTGTCGCTGCTCCCGGCGTCTCCGATACTCACTTCAG : GAATGC R P T G F C C R C S R R L R Y S L Q : E C D Q P V S V V A A P G V S D T H F R : N A S T N R F L L S L L P A S P I L T S : G M . . . . . . 87683 TATTGAATCCTCATTGTTCAAACAGTGGTTAAAGAACATACAAACTGAAACAGGACTGCT Y - I L I V Q T V V K E H T N - N R T A I E S S L F K Q W L K N I Q T E T G L L L L N P H C S N S G - R T Y K L K Q D C . . . . : . . 87623 GGCTAATGGAGCGCTGTCTTTAAAACAAGTTCTTATCCAG : GGTGTAGATATGTTTGGAGA G - W S A V F K T S S Y P : G C R Y V W R A N G A L S L K Q V L I Q : G V D M F G E W L M E R C L - N K F L S R : V - I C L E . . . . . . : 87044 GCGTTTGGGGTTTCTAAAATTCAAAGCAGATATTATTGATAAGGAAACGGGTCAAAAG : GT A F G V S K I Q S R Y Y - - G N G S K : G R L G F L K F K A D I I D K E T G Q K : V S V W G F - N S K Q I L L I R K R V K R : . . . . . . 86714 TCCTGGTATTGTCTTCGCACGGGGTCCAGCTGTTGCAGTTCTAATCCTTTTGGATTATGA S W Y C L R T G S S C C S S N P F G L - P G I V F A R G P A V A V L I L L D Y E F L V L S S H G V Q L L Q F - S F W I M . . . . : . . 86654 GGGTGAGACATATGCTGTGCTTACGGAACAG : GTTAGGGTCCCAGTTGGGAGGCTAATTTT G - D I C C A Y G T : G - G P S W E A N F G E T Y A V L T E Q : V R V P V G R L I L R V R H M L C L R N R : L G S Q L G G - F . . . . . . 86454 GGAATTGCCAGCAGGAATGTTGGATGATGACCAAGGCGACTTTGCTGGAACAGCAGTTCG G I A S R N V G - - P R R L C W N S S S E L P A G M L D D D Q G D F A G T A V R W N C Q Q E C W M M T K A T L L E Q Q F . : . . . . . 86394 AGAA : GTTGAGGAAGAAACTGGAATACACCTGAATGTCCATGATATGGTCGATCTCACGGC R : S - G R N W N T P E C P - Y G R S H G E : V E E E T G I H L N V H D M V D L T A E K : L R K K L E Y T - M S M I W S I S R . . . . . : . 85883 TTTTCTTGACGCGTCAACTGGGGGCAGAGTTTTTCCTTCTCCT : GGTGGATGTGATGAGGA F S - R V N W G Q S F S F S : W W M - - G F L D A S T G G R V F P S P : G G C D E E L F L T R Q L G A E F F L L L : V D V M R . . . . . . 85325 GATGAGTTTGTTTCTCTACAGAGGAAATGTCAGCAAAGAGAAAATCCAACAACTGCAAGG D E F V S L Q R K C Q Q R E N P T T A R M S L F L Y R G N V S K E K I Q Q L Q G R - V C F S T E E M S A K R K S N N C K . . . . . . 85265 GAAAGAAACCGGACTACGAGACCATGGTGAGCTGATCAAAGTGCATGTGGTTCCATATGA E R N R T T R P W - A D Q S A C G S I - K E T G L R D H G E L I K V H V V P Y D G K K P D Y E T M V S - S K C M W F H M . . . . . . 85205 TAAACTATGGCGTGCCACAGCTGATGCAAAGGCTCTGACCGCCATTGCTCTCTATGAGAT - T M A C H S - C K G S D R H C S L - D K L W R A T A D A K A L T A I A L Y E M I N Y G V P Q L M Q R L - P P L L S M R . . . . . . 85145 GGCTAAAAGAGATGGACTGTTGTCTTGATCGACGAGTTAATAATTTCTCCTCCATTATAT G - K R W T V V L I D E L I I S P P L Y A K R D G L L S - S T S - - F L L H Y I W L K E M D C C L D R R V N N F S S I I . . . . . . 85085 AACAACTTACGATTGTATGCTTTGCTGAAAAGATGACGACTCTCTATTTTAGGCAAGTCT N N L R L Y A L L K R - R L S I L G K S T T Y D C M L C - K D D D S L F - A S L - Q L T I V C F A E K M T T L Y F R Q V . . . . . . 85025 GCTTCTACAGTATGAGCATTCCTAGGTGAACGCTCCGGGTAATTGCATCTACTGTTGCTT A S T V - A F L G E R S G - L H L L L L L L Q Y E H S - V N A P G N C I Y C C L C F Y S M S I P R - T L R V I A S T V A . . . . . . 84965 GGTATTGAATTTTTGTATATTAGACGCAACTGTTCTGCATAGAACAGAATTTTACTGTTT G I E F L Y I R R N C S A - N R I L L F V L N F C I L D A T V L H R T E F Y C F W Y - I F V Y - T Q L F C I E Q N F T V . . . . . . 84905 CGAAAAAGAAATTTAAAAGGGGAAAGAGAAGATTCTTCCTTGTTATCTATCAGTATTCAA R K R N L K G E R E D S S L L S I S I Q E K E I - K G K E K I L P C Y L S V F N S K K K F K R G K R R F F L V I Y Q Y S . . . . . . 84845 CACGACTACCACCAACTGGAATTTGAGCTTTGTTTGAAGTTGAATTCCCTATCTTTTCTC H D Y H Q L E F E L C L K L N S L S F L T T T T N W N L S F V - S - I P Y L F S T R L P P T G I - A L F E V E F P I F S . . . . . . 84785 ATTCAAATGAAGAGGAGCAGTTCGTCACACAGGAACCAAAGAAAGTGAGAGCAACAAATG I Q M K R S S S S H R N Q R K - E Q Q M F K - R G A V R H T G T K E S E S N K - H S N E E E Q F V T Q E P K K V R A T N . . . . . . 84725 ATTACATTTATTTTTGATACATTAGCTTGTCCATCCAACTTAAAAGCATCATGAATGTGA I T F I F D T L A C P S N L K A S - M - L H L F L I H - L V H P T - K H H E C E D Y I Y F - Y I S L S I Q L K S I M N V . . . . . . 84665 ATGATACAGACGTAGTAGTATACAATGATCAAATGATTCTAAAGATAATAAACTGTTCAG M I Q T - - Y T M I K - F - R - - T V Q - Y R R S S I Q - S N D S K D N K L F R N D T D V V V Y N D Q M I L K I I N C S . . . . . . 84605 ATTTTGCTGGTTGCTTCCCAGATAGTTGTACCATCACAAGTGCAAAGCTTCTTGTAGTTC I L L V A S Q I V V P S Q V Q S F L - F F C W L L P R - L Y H H K C K A S C S S D F A G C F P D S C T I T S A K L L V V . . . . . . 84545 TCACCAACCCCGGCACTTCTAGCTATCACTGCTGCTGTAAGTCCTGGGTCTGATTTATCT S P T P A L L A I T A A V S P G S D L S H Q P R H F - L S L L L - V L G L I Y L L T N P G T S S Y H C C C K S W V - F I . . . . . . 84485 TCAGTAGCATATACAGCAATAGCTCTCCCAATCAGGTCAGCAACTCTCAGCTTCTCTTTA S V A Y T A I A L P I R S A T L S F S L Q - H I Q Q - L S Q S G Q Q L S A S L - F S S I Y S N S S P N Q V S N S Q L L F . . 84425 GGACCGGAATAAAATGCC G P E - N A D R N K M R T G I K C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-20_AGS-1_PPS_1 (88449 88217,87689 87584,87064 86987,86716 86624,86483 86391,85939 85841,85342 85118) (frame '2'; 924 bp, 308 residues) 1 KMRVTVPRFG LPFLKPLYEF PFSSSSSNLW PRNCSGSFSV KMSTTPPSQI ADIINLPTQL 61 DQPVSVVAAP GVSDTHFRNA IESSLFKQWL KNIQTETGLL ANGALSLKQV LIQGVDMFGE 121 RLGFLKFKAD IIDKETGQKV PGIVFARGPA VAVLILLDYE GETYAVLTEQ VRVPVGRLIL 181 ELPAGMLDDD QGDFAGTAVR EVEEETGIHL NVHDMVDLTA FLDASTGGRV FPSPGGCDEE 241 MSLFLYRGNV SKEKIQQLQG KETGLRDHGE LIKVHVVPYD KLWRATADAK ALTAIALYEM 301 AKRDGLLS- >C08HBa0165B06.1-_PGL-20_AGS-1_PPS_2 (84708 84493) (frame '0'; 213 bp, 71 residues) 1 YISLSIQLKS IMNVNDTDVV VYNDQMILKI INCSDFAGCF PDSCTITSAK LLVVLTNPGT 61 SSYHCCCKSW V- AGS-2 (87623 87584,87064 86624,86483 85841,85342 84951) SCR (e 1.000 d 0.977 a 0.997,e 1.000 d 0.993 a 0.990,e 0.966 d 0.825 a 0.993,e 1.000) Exon 1 87623 87584 ( 40 n); score: 1.000 Intron 1 87583 87065 ( 519 n); Pd: 0.977 Pa: 0.997 Exon 2 87064 86624 ( 441 n); score: 1.000 Intron 2 86623 86484 ( 140 n); Pd: 0.993 Pa: 0.990 Exon 3 86483 85841 ( 643 n); score: 0.966 Intron 3 85840 85343 ( 498 n); Pd: 0.825 Pa: 0.993 Exon 4 85342 84951 ( 392 n); score: 1.000 PGS (86067 85841,85342 84951) SGN-E368683+ PGS (86067 85841,85342 84957) SGN-E368105+ PGS (86067 85841,85342 85282) SGN-E240797+ PGS (86711 86624,86483 85926) SGN-E327843+ PGS (86730 86624,86483 85932) SGN-E346095+ PGS (87623 87584,87064 86624,86483 86448) SGN-E550985+ PGS (87623 87584,87064 86632) SGN-E256772+ 3-phase translation of AGS-2 (-strand): . . . . : . . 87623 GGCTAATGGAGCGCTGTCTTTAAAACAAGTTCTTATCCAG : GGTGTAGATATGTTTGGAGA G - W S A V F K T S S Y P : G C R Y V W R A N G A L S L K Q V L I Q : G V D M F G E L M E R C L - N K F L S R : V - I C L E . . . . . . 87044 GCGTTTGGGGTTTCTAAAATTCAAAGCAGATATTATTGATAAGGAAACGGGTCAAAAGGT A F G V S K I Q S R Y Y - - G N G S K G R L G F L K F K A D I I D K E T G Q K V S V W G F - N S K Q I L L I R K R V K R . . . . . . 86984 ATCTGATTAGAATCTCTCCATCCCATTGGATATGTAATTCATTCAGCCGGACTATGAATA I - L E S L H P I G Y V I H S A G L - I S D - N L S I P L D M - F I Q P D Y E - Y L I R I S P S H W I C N S F S R T M N . . . . . . 86924 GCTTCTCTTAAAGCTGTGTCCTCAATTTATTTTGCTTTGGTTTTTTTTCCTTGTACCTTA A S L K A V S S I Y F A L V F F P C T L L L L K L C P Q F I L L W F F F L V P - S F S - S C V L N L F C F G F F S L Y L . . . . . . 86864 GAGCATTGAACAATACAGTACTCGTGACATAGCTCGACAATATTAGCATGACAATGATGT E H - T I Q Y S - H S S T I L A - Q - C S I E Q Y S T R D I A R Q Y - H D N D V R A L N N T V L V T - L D N I S M T M M . . . . . . 86804 ATTACTTCCATTTTCCTTTTTCCTAGCTTATCCTTGGTTGCAACAAGGGAAACTTCTTTC I T S I F L F P S L S L V A T R E T S F L L P F S F F L A Y P W L Q Q G K L L S Y Y F H F P F S - L I L G C N K G N F F . . . . . . 86744 CTGTCACTATCACCTCTTTTGTGTCTAGGTTCCTGGTATTGTCTTCGCACGGGGTCCAGC L S L S P L L C L G S W Y C L R T G S S C H Y H L F C V - V P G I V F A R G P A P V T I T S F V S R F L V L S S H G V Q . . . . . . 86684 TGTTGCAGTTCTAATCCTTTTGGATTATGAGGGTGAGACATATGCTGTGCTTACGGAACA C C S S N P F G L - G - D I C C A Y G T V A V L I L L D Y E G E T Y A V L T E Q L L Q F - S F W I M R V R H M L C L R N . : . . . . . 86624 G : GTTAGGGTCCCAGTTGGGAGGCTAATTTTGGAATTGCCAGCAGGAATGTTGGATGATGA : G - G P S W E A N F G I A S R N V G - - : V R V P V G R L I L E L P A G M L D D D R : L G S Q L G G - F W N C Q Q E C W M M . . . . . . 86424 CCAAGGCGACTTTGCTGGAACAGCAGTTCGAGAAGTCTCTCTCTCCCTTTCTATCAAAGC P R R L C W N S S S R S L S L P F Y Q S Q G D F A G T A V R E V S L S L S I K A T K A T L L E Q Q F E K S L S P F L S K . . . . . . 86364 ACTATCCCCTTCTCAAAATTTTCTCAAGTGAGACAAGCTGTCCCCTTGTTTTTTTGGTGT T I P F S K F S Q V R Q A V P L F F W C L S P S Q N F L K - D K L S P C F F G V H Y P L L K I F S S E T S C P L V F L V . . . . . . 86304 TCAGTTCCCTAGTATATTAGTTTATTATGGCATAATGAACTGTATTCCTCTTATCGTGTC S V P - Y I S L L W H N E L Y S S Y R V Q F P S I L V Y Y G I M N C I P L I V S F S S L V Y - F I M A - - T V F L L S C . . . . . . 86244 ATTTTTCAACAAATCACTGGAAGTTCCTTCGTTTCTGAGCAAGTTCAATTGAATCCAGAA I F Q Q I T G S S F V S E Q V Q L N P E F F N K S L E V P S F L S K F N - I Q K H F S T N H W K F L R F - A S S I E S R . . . . . . 86184 ATCTGCTAATGAAACTATATGCGTGACTAAACTGAAATCCTTATAAGAACATCACAACTT I C - - N Y M R D - T E I L I R T S Q L S A N E T I C V T K L K S L - E H H N F N L L M K L Y A - L N - N P Y K N I T T . . . . . . 86124 CCTTATCAAAAGCAACTATTTGTTTTACATATTTGACAACTTAGTTGCACTCCACTGTAT P Y Q K Q L F V L H I - Q L S C T P L Y L I K S N Y L F Y I F D N L V A L H C I S L S K A T I C F T Y L T T - L H S T V . . . . . . 86064 AATTAAATATTGAATACTTTTGCATTTGAATATATATCGGTTTTAGCGCGTGGATGGAAA N - I L N T F A F E Y I S V L A R G W K I K Y - I L L H L N I Y R F - R V D G K - L N I E Y F C I - I Y I G F S A W M E . . . . . . 86004 AATCAGAGAGTTTGACATTGCTTGGCTTAACTTATAATTGAAGTATTTGATCTAATATGA N Q R V - H C L A - L I I E V F D L I - I R E F D I A W L N L - L K Y L I - Y D K S E S L T L L G L T Y N - S I - S N M . . . . . . 85944 TTCAGGTTGAGGAAGAAACTGGAATACACCTGAATGTCCATGATATGGTCGATCTCACGG F R L R K K L E Y T - M S M I W S I S R S G - G R N W N T P E C P - Y G R S H G I Q V E E E T G I H L N V H D M V D L T . . . . . : . 85884 CTTTTCTTGACGCGTCAACTGGGGGCAGAGTTTTTCCTTCTCCT : GGTGGATGTGATGAGG L F L T R Q L G A E F F L L L : V D V M R F S - R V N W G Q S F S F S : W W M - - G A F L D A S T G G R V F P S P : G G C D E . . . . . . 85326 AGATGAGTTTGTTTCTCTACAGAGGAAATGTCAGCAAAGAGAAAATCCAACAACTGCAAG R - V C F S T E E M S A K R K S N N C K D E F V S L Q R K C Q Q R E N P T T A R E M S L F L Y R G N V S K E K I Q Q L Q . . . . . . 85266 GGAAAGAAACCGGACTACGAGACCATGGTGAGCTGATCAAAGTGCATGTGGTTCCATATG G K K P D Y E T M V S - S K C M W F H M E R N R T T R P W - A D Q S A C G S I - G K E T G L R D H G E L I K V H V V P Y . . . . . . 85206 ATAAACTATGGCGTGCCACAGCTGATGCAAAGGCTCTGACCGCCATTGCTCTCTATGAGA I N Y G V P Q L M Q R L - P P L L S M R - T M A C H S - C K G S D R H C S L - D D K L W R A T A D A K A L T A I A L Y E . . . . . . 85146 TGGCTAAAAGAGATGGACTGTTGTCTTGATCGACGAGTTAATAATTTCTCCTCCATTATA W L K E M D C C L D R R V N N F S S I I G - K R W T V V L I D E L I I S P P L Y M A K R D G L L S - S T S - - F L L H Y . . . . . . 85086 TAACAACTTACGATTGTATGCTTTGCTGAAAAGATGACGACTCTCTATTTTAGGCAAGTC - Q L T I V C F A E K M T T L Y F R Q V N N L R L Y A L L K R - R L S I L G K S I T T Y D C M L C - K D D D S L F - A S . . . . . . 85026 TGCTTCTACAGTATGAGCATTCCTAGGTGAACGCTCCGGGTAATTGCATCTACTGTTGCT C F Y S M S I P R - T L R V I A S T V A A S T V - A F L G E R S G - L H L L L L L L L Q Y E H S - V N A P G N C I Y C C . . 84966 TGGTATTGAATTTTTG W Y - I F G I E F L L V L N F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-20_AGS-2_PPS_1 (85954 85841,85342 85118) (frame '0'; 336 bp, 112 residues) 1 SNMIQVEEET GIHLNVHDMV DLTAFLDAST GGRVFPSPGG CDEEMSLFLY RGNVSKEKIQ 61 QLQGKETGLR DHGELIKVHV VPYDKLWRAT ADAKALTAIA LYEMAKRDGL LS- >C08HBa0165B06.1-_PGL-20_AGS-2_PPS_2 (86716 86624,86483 86334) (frame '2'; 240 bp, 80 residues) 1 VPGIVFARGP AVAVLILLDY EGETYAVLTE QVRVPVGRLI LELPAGMLDD DQGDFAGTAV 61 REVSLSLSIK ALSPSQNFLK - AGS-3 (87622 87584,87064 86624,86483 86391,85939 85841,85342 85220) SCR (e 1.000 d 0.977 a 0.997,e 1.000 d 0.993 a 0.990,e 1.000 d 0.000 a 0.999,e 1.000 d 0.825 a 0.993,e 0.935) Exon 1 87622 87584 ( 39 n); score: 1.000 Intron 1 87583 87065 ( 519 n); Pd: 0.977 Pa: 0.997 Exon 2 87064 86624 ( 441 n); score: 1.000 Intron 2 86623 86484 ( 140 n); Pd: 0.993 Pa: 0.990 Exon 3 86483 86391 ( 93 n); score: 1.000 Intron 3 86390 85940 ( 451 n); Pd: 0.000 Pa: 0.999 Exon 4 85939 85841 ( 99 n); score: 1.000 Intron 4 85840 85343 ( 498 n); Pd: 0.825 Pa: 0.993 Exon 5 85342 85220 ( 123 n); score: 0.935 PGS (87622 87584,87064 86624,86483 86391,85939 85841,85342 85220) SGN-E263752+ 3-phase translation of AGS-3 (-strand): . . . . : . . 87622 GCTAATGGAGCGCTGTCTTTAAAACAAGTTCTTATCCAG : GGTGTAGATATGTTTGGAGAG A N G A L S L K Q V L I Q : G V D M F G E L M E R C L - N K F L S R : V - I C L E S - W S A V F K T S S Y P : G C R Y V W R . . . . . . 87043 CGTTTGGGGTTTCTAAAATTCAAAGCAGATATTATTGATAAGGAAACGGGTCAAAAGGTA R L G F L K F K A D I I D K E T G Q K V V W G F - N S K Q I L L I R K R V K R Y A F G V S K I Q S R Y Y - - G N G S K G . . . . . . 86983 TCTGATTAGAATCTCTCCATCCCATTGGATATGTAATTCATTCAGCCGGACTATGAATAG S D - N L S I P L D M - F I Q P D Y E - L I R I S P S H W I C N S F S R T M N S I - L E S L H P I G Y V I H S A G L - I . . . . . . 86923 CTTCTCTTAAAGCTGTGTCCTCAATTTATTTTGCTTTGGTTTTTTTTCCTTGTACCTTAG L L L K L C P Q F I L L W F F F L V P - F S - S C V L N L F C F G F F S L Y L R A S L K A V S S I Y F A L V F F P C T L . . . . . . 86863 AGCATTGAACAATACAGTACTCGTGACATAGCTCGACAATATTAGCATGACAATGATGTA S I E Q Y S T R D I A R Q Y - H D N D V A L N N T V L V T - L D N I S M T M M Y E H - T I Q Y S - H S S T I L A - Q - C . . . . . . 86803 TTACTTCCATTTTCCTTTTTCCTAGCTTATCCTTGGTTGCAACAAGGGAAACTTCTTTCC L L P F S F F L A Y P W L Q Q G K L L S Y F H F P F S - L I L G C N K G N F F P I T S I F L F P S L S L V A T R E T S F . . . . . . 86743 TGTCACTATCACCTCTTTTGTGTCTAGGTTCCTGGTATTGTCTTCGCACGGGGTCCAGCT C H Y H L F C V - V P G I V F A R G P A V T I T S F V S R F L V L S S H G V Q L L S L S P L L C L G S W Y C L R T G S S . . . . . . : 86683 GTTGCAGTTCTAATCCTTTTGGATTATGAGGGTGAGACATATGCTGTGCTTACGGAACAG : V A V L I L L D Y E G E T Y A V L T E Q : L Q F - S F W I M R V R H M L C L R N R : C C S S N P F G L - G - D I C C A Y G T : . . . . . . 86483 GTTAGGGTCCCAGTTGGGAGGCTAATTTTGGAATTGCCAGCAGGAATGTTGGATGATGAC V R V P V G R L I L E L P A G M L D D D L G S Q L G G - F W N C Q Q E C W M M T G - G P S W E A N F G I A S R N V G - - . . . . : . . 86423 CAAGGCGACTTTGCTGGAACAGCAGTTCGAGAA : GTTGAGGAAGAAACTGGAATACACCTG Q G D F A G T A V R E : V E E E T G I H L K A T L L E Q Q F E K : L R K K L E Y T - P R R L C W N S S S R : S - G R N W N T P . . . . . . 85912 AATGTCCATGATATGGTCGATCTCACGGCTTTTCTTGACGCGTCAACTGGGGGCAGAGTT N V H D M V D L T A F L D A S T G G R V M S M I W S I S R L F L T R Q L G A E F E C P - Y G R S H G F S - R V N W G Q S . . : . . . . 85852 TTTCCTTCTCCT : GGTGGATGTGATGAGGAGATGAGTTTGTTTCTCTACAGAGGAAATGTC F P S P : G G C D E E M S L F L Y R G N V F L L L : V D V M R R - V C F S T E E M S F S F S : W W M - - G D E F V S L Q R K C . . . . . . 85294 AGCAAAGAGAAAATCCAACAACTGCAAGGGAAAGAAACCGGACTACGAGACCATGGTGAG S K E K I Q Q L Q G K E T G L R D H G E A K R K S N N C K G K K P D Y E T M V S Q Q R E N P T T A R E R N R T T R P W - . . 85234 CTGATCAAAGTGCAT L I K V H - S K C A D Q S A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-20_AGS-3_PPS_1 (86716 86624,86483 86391,85939 85841,85342 85220) (frame '1'; 408 bp, 136 residues) 1 VPGIVFARGP AVAVLILLDY EGETYAVLTE QVRVPVGRLI LELPAGMLDD DQGDFAGTAV 61 REVEEETGIH LNVHDMVDLT AFLDASTGGR VFPSPGGCDE EMSLFLYRGN VSKEKIQQLQ 121 GKETGLRDHG ELIKVH AGS-4 (89175 88738) SCR (e 0.957) Exon 1 89175 88738 ( 438 n); score: 0.957 PGS (89175 88738) SGN-E393839- PGS (88948 88738) SGN-E393853- 3-phase translation of AGS-4 (-strand): . . . . . . 89175 GTGAAGTTGCATTTTCTTTTTATGCCAAGCTTCTGGCTGAGGAAATTGTGCTTTCCATAT V K L H F L F M P S F W L R K L C F P Y - S C I F F L C Q A S G - G N C A F H I E V A F S F Y A K L L A E E I V L S I . . . . . . 89115 CTTGCTCTCACTCACTTTATCGAGCTTCCCTCATCTCAGCTTGTTCCTGCTTTACTTGGT L A L T H F I E L P S S Q L V P A L L G L L S L T L S S F P H L S L F L L Y L V S C S H S L Y R A S L I S A C S C F T W . . . . . . 89055 ATTTATGCCGAATTGTGAAGCAACTCTGCCACTGCTCATCCTATACCATATCATGATGCC I Y A E L - S N S A T A H P I P Y H D A F M P N C E A T L P L L I L Y H I M M P Y L C R I V K Q L C H C S S Y T I S - C . . . . . . 88995 CCTTCCTCCAACGAACAAATGCTGGAAAAGATTGAAAATGTTGTAACATAGACATTATAC P S S N E Q M L E K I E N V V T - T L Y L P P T N K C W K R L K M L - H R H Y T P F L Q R T N A G K D - K C C N I D I I . . . . . . 88935 AACTTCTTGACTATACAGTTATATGATTGATTATACTGAATTACAACTATTCTGTTAGCA N F L T I Q L Y D - L Y - I T T I L L A T S - L Y S Y M I D Y T E L Q L F C - H Q L L D Y T V I - L I I L N Y N Y S V S . . . . . . 88875 TAAATGGTCAAGAAACACTGTGAAGTGTTCTTCCCTCAGTTCACTCTTCTAGTAGGACTG - M V K K H C E V F F P Q F T L L V G L K W S R N T V K C S S L S S L F - - D W I N G Q E T L - S V L P S V H S S S R T . . . . . . 88815 GATACTTCCCAGAGATGTATATTTAGCTGCCTTCCCCTTGGTGTATGTTTGAGCTTGAAT D T S Q R C I F S C L P L G V C L S L N I L P R D V Y L A A F P L V Y V - A - I G Y F P E M Y I - L P S P W C M F E L E . . 88755 AAAATGCTCCTTTACTGA K M L L Y - K C S F T - N A P L L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-4 (+strand): . . . . . . 88738 TCAGTAAAGGAGCATTTTATTCAAGCTCAAACATACACCAAGGGGAAGGCAGCTAAATAT S V K E H F I Q A Q T Y T K G K A A K Y Q - R S I L F K L K H T P R G R Q L N I S K G A F Y S S S N I H Q G E G S - I . . . . . . 88798 ACATCTCTGGGAAGTATCCAGTCCTACTAGAAGAGTGAACTGAGGGAAGAACACTTCACA T S L G S I Q S Y - K S E L R E E H F T H L W E V S S P T R R V N - G K N T S Q Y I S G K Y P V L L E E - T E G R T L H . . . . . . 88858 GTGTTTCTTGACCATTTATGCTAACAGAATAGTTGTAATTCAGTATAATCAATCATATAA V F L D H L C - Q N S C N S V - S I I - C F L T I Y A N R I V V I Q Y N Q S Y N S V S - P F M L T E - L - F S I I N H I . . . . . . 88918 CTGTATAGTCAAGAAGTTGTATAATGTCTATGTTACAACATTTTCAATCTTTTCCAGCAT L Y S Q E V V - C L C Y N I F N L F Q H C I V K K L Y N V Y V T T F S I F S S I T V - S R S C I M S M L Q H F Q S F P A . . . . . . 88978 TTGTTCGTTGGAGGAAGGGGCATCATGATATGGTATAGGATGAGCAGTGGCAGAGTTGCT L F V G G R G I M I W Y R M S S G R V A C S L E E G A S - Y G I G - A V A E L L F V R W R K G H H D M V - D E Q W Q S C . . . . . . 89038 TCACAATTCGGCATAAATACCAAGTAAAGCAGGAACAAGCTGAGATGAGGGAAGCTCGAT S Q F G I N T K - S R N K L R - G K L D H N S A - I P S K A G T S - D E G S S I F T I R H K Y Q V K Q E Q A E M R E A R . . . . . . 89098 AAAGTGAGTGAGAGCAAGATATGGAAAGCACAATTTCCTCAGCCAGAAGCTTGGCATAAA K V S E S K I W K A Q F P Q P E A W H K K - V R A R Y G K H N F L S Q K L G I K - S E - E Q D M E S T I S S A R S L A - . . 89158 AAGAAAATGCAACTTCAC K K M Q L H R K C N F K E N A T S Maximal non-overlapping open reading frames (>= 64 codons): none AGS-5 (91450 91422,91387 91078,89212 89186) SCR (e 0.862 d 0.000 a 0.000,e 0.879 d 0.000 a 0.084,e 0.741) Exon 1 91450 91422 ( 29 n); score: 0.862 Intron 1 91421 91388 ( 34 n); Pd: 0.000 Pa: 0.000 Exon 2 91387 91078 ( 310 n); score: 0.879 Intron 2 91077 89213 (1865 n); Pd: 0.000 Pa: 0.084 Exon 3 89212 89186 ( 27 n); score: 0.741 PGS (91168 91078,89212 89186) SGN-E240526- PGS (91273 91070) SGN-E237992+ PGS (91273 91080) SGN-E233074+ PGS (91273 91080) SGN-E242674+ PGS (91273 91080) SGN-E233594+ PGS (91273 91080) SGN-E233735+ PGS (91273 91080) SGN-E377238+ PGS (91273 91080) SGN-E240879+ PGS (91183 91120) SGN-E228654+ PGS (91183 91120) SGN-E217478+ PGS (91183 91120) SGN-E229134+ PGS (91450 91422,91387 91231) SGN-E204223+ 3-phase translation of AGS-5 (-strand): . . . : . . . 91450 ATGGTTAAGGGCCCGTTTGGATGGGCTTA : GCTGAAACTTATTTTTAAAATAAGCAGTTAT M V K G P F G W A - : L K L I F K I S S Y W L R A R L D G L : S - N L F L K - A V M G - G P V W M G L : A E T Y F - N K Q L . . . . . . 91356 GCGTTTGGATAAAAGTGCTGAAGTTGTTATGCCAAACGTGAAAAGGAAAAAATGGAAAAA A F G - K C - S C Y A K R E K E K M E K R L D K S A E V V M P N V K R K K W K K C V W I K V L K L L C Q T - K G K N G K . . . . . . 91296 AGAGATGTTAGGGTTATATGGATAATTTGGTCAACTTAAAACAGCTTATAAGCTAAAAAA R D V R V I W I I W S T - N S L - A K K E M L G L Y G - F G Q L K T A Y K L K N K R C - G Y M D N L V N L K Q L I S - K . . . . . . 91236 CAAAAAGCACCCCTACCCCAGCTTTTAGCTTTTGGCTTAAAATAAGTTTTTTTTAACTTA Q K A P L P Q L L A F G L K - V F F N L K K H P Y P S F - L L A - N K F F L T - T K S T P T P A F S F W L K I S F F - L . . . . . . 91176 AAATAAGTTATTTCGAGTATTGCCAAACAGTTAAATAAGTCAAAAACCAGCTTTTAAGTC K - V I S S I A K Q L N K S K T S F - V N K L F R V L P N S - I S Q K P A F K S K I S Y F E Y C Q T V K - V K N Q L L S . . . . : . . 91116 AGTTTGACCAGCTTTTAAGCTAAGCCAAATAGGCTCTAA : ATTCTGTTCAACAAGCCAAGA S L T S F - A K P N R L - : I L F N K P R V - P A F K L S Q I G S K : F C S T S Q E Q F D Q L L S - A K - A L : N S V Q Q A K . 89191 AGAAGT R S E K K Maximal non-overlapping open reading frames (>= 64 codons): none AGS-6 (89933 89923,89792 89227) SCR (e 1.000 d 0.993 a 0.982,e 1.000) Exon 1 89933 89923 ( 11 n); score: 1.000 Intron 1 89922 89793 ( 130 n); Pd: 0.993 Pa: 0.982 Exon 2 89792 89227 ( 566 n); score: 1.000 PGS (89932 89923,89792 89227) SGN-E275721+ PGS (89933 89923,89792 89246) SGN-E393840+ PGS (89933 89923,89792 89266) SGN-E393601+ PGS (89810 89340) SGN-E269749+ PGS (89932 89923,89792 89366) SGN-E274001+ PGS (89933 89923,89792 89521) SGN-E394012+ 3-phase translation of AGS-6 (-strand): . . : . . . . 89933 AGAAGATTGAG : GATTCATGGATACCAGAAATGTGTAAGATGAGGTTAATGCTGAGATTGG R R L R : I H G Y Q K C V R - G - C - D W E D - : G F M D T R N V - D E V N A E I G K I E : D S W I P E M C K M R L M L R L . . . . . . 89743 TGCTTCTTTAATCTGATGAGAAAATGTTCATTGTTTGGACTGCATTTGACTTGCAATTCT C F F N L M R K C S L F G L H L T C N S A S L I - - E N V H C L D C I - L A I L V L L - S D E K M F I V W T A F D L Q F . . . . . . 89683 GTGCATAAAGGAATGTTAGGTTTTATTGCATTGTTGTTTATAAATAAACTTGTATTACAA V H K G M L G F I A L L F I N K L V L Q C I K E C - V L L H C C L - I N L Y Y K C A - R N V R F Y C I V V Y K - T C I T . . . . . . 89623 AGGGAGCAATTGAGGAGAATTCTGAAAGACTTCTCTTCTATTTATCAAGAACTGATGTGA R E Q L R R I L K D F S S I Y Q E L M - G S N - G E F - K T S L L F I K N - C D K G A I E E N S E R L L F Y L S R T D V . . . . . . 89563 CAAGTCACAAGTACTTGCAATTATAAATGTCACACAGGAGTGAGGACCATGAATTGGCTT Q V T S T C N Y K C H T G V R T M N W L K S Q V L A I I N V T Q E - G P - I G F T S H K Y L Q L - M S H R S E D H E L A . . . . . . 89503 TCTGGTGTTATATCCCACATATTTCCGTGTCTATGATTTCTGGATTCAATTTTGAAGTTT S G V I S H I F P C L - F L D S I L K F L V L Y P T Y F R V Y D F W I Q F - S F F W C Y I P H I S V S M I S G F N F E V . . . . . . 89443 CTTCGCAGAATTATTAGGATCTGTTGCTAGTAATCCAGGGCAAAATTCAACATCCAACGC L R R I I R I C C - - S R A K F N I Q R F A E L L G S V A S N P G Q N S T S N A S S Q N Y - D L L L V I Q G K I Q H P T . . . . . . 89383 CAAGGGGTGAGTTCTCACTTCCAAGTGCTGCCTCCAAAATTGGTTTGTGGATAGCCATAA Q G V S S H F Q V L P P K L V C G - P - K G - V L T S K C C L Q N W F V D S H K P R G E F S L P S A A S K I G L W I A I . . . . . . 89323 ACCTGTATGGTGTAAAATATGTTGGCTTAATGTCTGTATCCTTTGAGATTTACCATTTGT T C M V - N M L A - C L Y P L R F T I C P V W C K I C W L N V C I L - D L P F V N L Y G V K Y V G L M S V S F E I Y H L . . . . 89263 TCATGAAGACTTGGGTCTGCTTTGAGATGGTACCGAC S - R L G S A L R W Y R H E D L G L L - D G T D F M K T W V C F E M V P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-20_AGS-6_PPS_1 (89426 89229) (frame '0'; 198 bp, 66 residues) 1 DLLLVIQGKI QHPTPRGEFS LPSAASKIGL WIAINLYGVK YVGLMSVSFE IYHLFMKTWV 61 CFEMVP AGS-7 (91207 91051,90494 90469) SCR (e 0.850 d 0.000 a 0.869,e 0.731) Exon 1 91207 91051 ( 157 n); score: 0.850 Intron 1 91050 90495 ( 556 n); Pd: 0.000 Pa: 0.869 Exon 2 90494 90469 ( 26 n); score: 0.731 PGS (91207 91051,90494 90469) SGN-E376754+ 3-phase translation of AGS-7 (-strand): . . . . . . 91207 TTTTGGCTTAAAATAAGTTTTTTTTAACTTAAAATAAGTTATTTCGAGTATTGCCAAACA F W L K I S F F - L K I S Y F E Y C Q T F G L K - V F F N L K - V I S S I A K Q L A - N K F F L T - N K L F R V L P N . . . . . . 91147 GTTAAATAAGTCAAAAACCAGCTTTTAAGTCAGTTTGACCAGCTTTTAAGCTAAGCCAAA V K - V K N Q L L S Q F D Q L L S - A K L N K S K T S F - V S L T S F - A K P N S - I S Q K P A F K S V - P A F K L S Q . . . . : . . 91087 TAGGCTCTAAATCTAGAAACAAATAGGATAGTCAAAC : TTACAAGTTCAATCATTAGAGAA - A L N L E T N R I V K : L T S S I I R E R L - I - K Q I G - S N : L Q V Q S L E N I G S K S R N K - D S Q T : Y K F N H - R . 90471 CAC H T Maximal non-overlapping open reading frames (>= 64 codons): none AGS-8 (91182 91056,90792 90763,90494 90481) SCR (e 0.866 d 0.000 a 0.998,e 0.567 d 0.000 a 0.869,e 0.786) Exon 1 91182 91056 ( 127 n); score: 0.866 Intron 1 91055 90793 ( 263 n); Pd: 0.000 Pa: 0.998 Exon 2 90792 90763 ( 30 n); score: 0.567 Intron 2 90762 90495 ( 268 n); Pd: 0.000 Pa: 0.869 Exon 3 90494 90481 ( 14 n); score: 0.786 PGS (91182 91056,90792 90763,90494 90481) SGN-E577960- 3-phase translation of AGS-8 (-strand): . . . . . . 91182 AACTTAAAATAAGTTATTTCGAGTATTGCCAAACAGTTAAATAAGTCAAAAACCAGCTTT N L K - V I S S I A K Q L N K S K T S F T - N K L F R V L P N S - I S Q K P A F L K I S Y F E Y C Q T V K - V K N Q L . . . . . . 91122 TAAGTCAGTTTGACCAGCTTTTAAGCTAAGCCAAATAGGCTCTAAATCTAGAAACAAATA - V S L T S F - A K P N R L - I - K Q I K S V - P A F K L S Q I G S K S R N K - L S Q F D Q L L S - A K - A L N L E T N . : . . . : . . 91062 GGATAGT : GGATACCCTGGGATTACTCCTTTTGAGGGA : TTACAAGTTCAATC G - : W I P W D Y S F - G : I T S S I D S : G Y P G I T P F E G : L Q V Q R I V : D T L G L L L L R D : Y K F N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-9 (91443 91066,90792 90739) SCR (e 0.851 d 0.000 a 0.998,e 0.556) Exon 1 91443 91066 ( 378 n); score: 0.851 Intron 1 91065 90793 ( 273 n); Pd: 0.000 Pa: 0.998 Exon 2 90792 90739 ( 54 n); score: 0.556 PGS (91276 91066,90792 90739) SGN-E253695- PGS (91273 91066,90792 90739) SGN-E249253- PGS (91443 91268) SGN-E578392+ PGS (91441 91365) SGN-E391901- 3-phase translation of AGS-9 (-strand): . . . . . . 91443 AGGGCCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAAGTACTTTTGAAAGTGCTG R A R L D G L N K S S F K K V L L K V L G P V W M G L I K A A L K K Y F - K C - G P F G W A - - K Q L - K S T F E S A . . . . . . 91383 AAACTTATTTTTAAAATAAGCAGTTATGCGTTTGGATAAAAGTGCTGAAGTTGTTATGCC K L I F K I S S Y A F G - K C - S C Y A N L F L K - A V M R L D K S A E V V M P E T Y F - N K Q L C V W I K V L K L L C . . . . . . 91323 AAACGTGAAAAGGAAAAAATGGAAAAAAGAGATGTTAGGGTTATATGGATAATTTGGTCA K R E K E K M E K R D V R V I W I I W S N V K R K K W K K E M L G L Y G - F G Q Q T - K G K N G K K R C - G Y M D N L V . . . . . . 91263 ACTTAAAACAGCTTATAAGCTAAAAAACAAAAAGCACCCCTACCCCAGCTTTTAGCTTTT T - N S L - A K K Q K A P L P Q L L A F L K T A Y K L K N K K H P Y P S F - L L N L K Q L I S - K T K S T P T P A F S F . . . . . . 91203 GGCTTAAAATAAGTTTTTTTTAACTTAAAATAAGTTATTTCGAGTATTGCCAAACAGTTA G L K - V F F N L K - V I S S I A K Q L A - N K F F L T - N K L F R V L P N S - W L K I S F F - L K I S Y F E Y C Q T V . . . . . . 91143 AATAAGTCAAAAACCAGCTTTTAAGTCAGTTTGACCAGCTTTTAAGCTAAGCCAAATAGG N K S K T S F - V S L T S F - A K P N R I S Q K P A F K S V - P A F K L S Q I G K - V K N Q L L S Q F D Q L L S - A K - . . : . . . . 91083 CTCTAAATCTAGAAACAA : GGATACCCTGGGATTACTCCTTTTGAGGGAATGGCTTCTGGA L - I - K Q : G Y P G I T P F E G M A S G S K S R N K : D T L G L L L L R E W L L E A L N L E T : R I P W D Y S F - G N G F W . . 90750 GTTGTTGCACTG V V A L L L H S C C T Maximal non-overlapping open reading frames (>= 64 codons): none PGL 21 (+ strand): 99715 101197 AGS-1 (99715 101197) SCR (e 1.000) Exon 1 99715 101197 (1483 n); score: 1.000 PGS (99715 100380) SGN-E371800+ PGS (99715 100379) SGN-E372204+ PGS (99715 100136) SGN-E282699+ PGS (99974 100278) SGN-E202230+ PGS (100379 100898) SGN-E266638+ PGS (100436 101197) SGN-E371799- PGS (100457 101197) SGN-E372203- PGS (100543 101197) SGN-E372036- PGS (100557 101193) SGN-E342288+ PGS (100711 101115) SGN-E234013- 3-phase translation of AGS-1 (+strand): . . . . . . 99715 TTAAGTTGTTGGAAGCATTGTAATGGTGGAGGCACAGTCATGGACTACAAGAAGGGGAAG L S C W K H C N G G G T V M D Y K K G K - V V G S I V M V E A Q S W T T R R G S K L L E A L - W W R H S H G L Q E G E . . . . . . 99775 CAATCCAAGATTGGAGTCACCCCAAGATCAAGTCTTGGATATGCCAGTAACCCCAACTGC Q S K I G V T P R S S L G Y A S N P N C N P R L E S P Q D Q V L D M P V T P T A A I Q D W S H P K I K S W I C Q - P Q L . . . . . . 99835 TGAAATCAGGCAGCAACAGTATTCTAATGGTGGGATAACTTCTTTGGTGTCACCAAATGT - N Q A A T V F - W W D N F F G V T K C E I R Q Q Q Y S N G G I T S L V S P N V L K S G S N S I L M V G - L L W C H Q M . . . . . . 99895 ACTTACTGCTCTTATAATTGCTTCTTGGTACTGTTCAAATATTGGGGTGTTGTTGCTAAA T Y C S Y N C F L V L F K Y W G V V A K L T A L I I A S W Y C S N I G V L L L N Y L L L L - L L L G T V Q I L G C C C - . . . . . . 99955 CAAGTATCTTTTGAGTTTTTATGGTTATCGTTACCCAATATTCTTGACTATGTTGCATAT Q V S F E F L W L S L P N I L D Y V A Y K Y L L S F Y G Y R Y P I F L T M L H M T S I F - V F M V I V T Q Y S - L C C I . . . . . . 100015 GTTGTCATGTGCTACTTATAGTTTAGTTGCTATTAAGTGGCTGGAAGTTGTTCCTTTCCA V V M C Y L - F S C Y - V A G S C S F P L S C A T Y S L V A I K W L E V V P F Q C C H V L L I V - L L L S G W K L F L S . . . . . . 100075 GCAGATACATAGCAGGAAACAGTTCTTCAAGATTCTTGCTTTGAGTGCTATTTTTTGTTT A D T - Q E T V L Q D S C F E C Y F L F Q I H S R K Q F F K I L A L S A I F C F S R Y I A G N S S S R F L L - V L F F V . . . . . . 100135 TTCTGTTGTTTGTGGTAATACTTCATTGAGGTACCTTCCTGTATCGTTTAATCAAGCAAT F C C L W - Y F I E V P S C I V - S S N S V V C G N T S L R Y L P V S F N Q A I F L L F V V I L H - G T F L Y R L I K Q . . . . . . 100195 TGGTGCTACTACCCCATTTTTTACTGCTATTTTTGCTTTTGTGATTACTTGTAAGAAAGA W C Y Y P I F Y C Y F C F C D Y L - E R G A T T P F F T A I F A F V I T C K K E L V L L P H F L L L F L L L - L L V R K . . . . . . 100255 AACTGCTGAGGTTTATTTAGCTCTTGTCCCTGTGGTTCTTGGTATTGTTTTGGCTAGCAA N C - G L F S S C P C G S W Y C F G - Q T A E V Y L A L V P V V L G I V L A S N K L L R F I - L L S L W F L V L F W L A . . . . . . 100315 TAGTGAGCCATTGTTCCATTTGTTTGGGTTCTTGATGGCTTTAGGTTCAACTGCTGGGAG - - A I V P F V W V L D G F R F N C W E S E P L F H L F G F L M A L G S T A G R I V S H C S I C L G S - W L - V Q L L G . . . . . . 100375 AGCCTTGAAATCTGTTGTTCAGGGGTTGTTGTTATCCTCTGATGCTGAGAAATTGCACTC S L E I C C S G V V V I L - C - E I A L A L K S V V Q G L L L S S D A E K L H S E P - N L L F R G C C Y P L M L R N C T . . . . . . 100435 TATGAATCTGTTATTATACATGGCTCCAATGGCAGCAATGATTTTGCTTCCTTTTACACT Y E S V I I H G S N G S N D F A S F Y T M N L L L Y M A P M A A M I L L P F T L L - I C Y Y T W L Q W Q Q - F C F L L H . . . . . . 100495 ATACATAGAGGGGAATGTAGCTGCAGTTACAGTGGAGAAAGCTAAGGGAGATGGATTTAT I H R G E C S C S Y S G E S - G R W I Y Y I E G N V A A V T V E K A K G D G F M Y T - R G M - L Q L Q W R K L R E M D L . . . . . . 100555 GGTTTTCTTGTTGATTGGTAATGCCACAGTTGCTTATTTGGTGAACTTGACTAATTTCTT G F L V D W - C H S C L F G E L D - F L V F L L I G N A T V A Y L V N L T N F L W F S C - L V M P Q L L I W - T - L I S . . . . . . 100615 GGTTACTAAGCATACAAGTGCCTTGACACTGCAAGTTTTGGGGAATGCCAAGGCTGCAGT G Y - A Y K C L D T A S F G E C Q G C S V T K H T S A L T L Q V L G N A K A A V W L L S I Q V P - H C K F W G M P R L Q . . . . . . 100675 GGCTGCAGTGGTGTCAGTTTTGATATTCAGGAATCCAGTGAACATCATGGGCATAACAGG G C S G V S F D I Q E S S E H H G H N R A A V V S V L I F R N P V N I M G I T G W L Q W C Q F - Y S G I Q - T S W A - Q . . . . . . 100735 ATTTGCTGTGACTGTAATGGGTGTGGTGCTTTACAGTGAGGCAAAGAAGAGATCTAAAGT I C C D C N G C G A L Q - G K E E I - S F A V T V M G V V L Y S E A K K R S K V D L L - L - W V W C F T V R Q R R D L K . . . . . . 100795 AACAGCACACTGATGATAGTTTGAAAGATTCAATCTTGATGATGCCACACAAAGGTACAA N S T L M I V - K I Q S - - C H T K V Q T A H - - - F E R F N L D D A T Q R Y N - Q H T D D S L K D S I L M M P H K G T . . . . . . 100855 TTTTTTTTTTGTTTTTGGTCTAATTAGTATTCATTCTGGATGGGGTGGGGGAAGATTAAG F F F C F W S N - Y S F W M G W G K I K F F F V F G L I S I H S G W G G G R L S I F F L F L V - L V F I L D G V G E D - . . . . . . 100915 TGGTTGGATTATATTCCACTGTATAGGAACAAAGATGGGGTAAAGTGGAAAAAGGTTTAT W L D Y I P L Y R N K D G V K W K K V Y G W I I F H C I G T K M G - S G K R F M V V G L Y S T V - E Q R W G K V E K G L . . . . . . 100975 GTGCTATGCTTTTTTTCCTCTATATAATTGTTCTTGATTGGGGTTGGTTTGAAGAGAATA V L C F F S S I - L F L I G V G L K R I C Y A F F P L Y N C S - L G L V - R E - C A M L F F L Y I I V L D W G W F E E N . . . . . . 101035 AAGTTGTCTCTTTTACTTTTCCCCTTTCTGTAATTTTATACTCCTTTGATGCAACTACAA K L S L L L F P F L - F Y T P L M Q L Q S C L F Y F S P F C N F I L L - C N Y N K V V S F T F P L S V I L Y S F D A T T . . . . . . 101095 CAAAGAAAGACTGATTCTTTAGATATTGTTCTCTATGTGTAATATTCTTGTGGGAGAATT Q R K T D S L D I V L Y V - Y S C G R I K E R L I L - I L F S M C N I L V G E L T K K D - F F R Y C S L C V I F L W E N . . . . . 101155 GTCCTCCCAATATATTTTGTCCAAACTCAAGTTTACTTTCCTA V L P I Y F V Q T Q V Y F P S S Q Y I L S K L K F T F L C P P N I F C P N S S L L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-21_AGS-1_PPS_1 (99719 100807) (frame '2'; 1086 bp, 362 residues) 1 VVGSIVMVEA QSWTTRRGSN PRLESPQDQV LDMPVTPTAE IRQQQYSNGG ITSLVSPNVL 61 TALIIASWYC SNIGVLLLNK YLLSFYGYRY PIFLTMLHML SCATYSLVAI KWLEVVPFQQ 121 IHSRKQFFKI LALSAIFCFS VVCGNTSLRY LPVSFNQAIG ATTPFFTAIF AFVITCKKET 181 AEVYLALVPV VLGIVLASNS EPLFHLFGFL MALGSTAGRA LKSVVQGLLL SSDAEKLHSM 241 NLLLYMAPMA AMILLPFTLY IEGNVAAVTV EKAKGDGFMV FLLIGNATVA YLVNLTNFLV 301 TKHTSALTLQ VLGNAKAAVA AVVSVLIFRN PVNIMGITGF AVTVMGVVLY SEAKKRSKVT 361 AH- 3-phase translation of AGS-1 (-strand): . . . . . . 101197 TAGGAAAGTAAACTTGAGTTTGGACAAAATATATTGGGAGGACAATTCTCCCACAAGAAT - E S K L E F G Q N I L G G Q F S H K N R K V N L S L D K I Y W E D N S P T R I G K - T - V W T K Y I G R T I L P Q E . . . . . . 101137 ATTACACATAGAGAACAATATCTAAAGAATCAGTCTTTCTTTGTTGTAGTTGCATCAAAG I T H R E Q Y L K N Q S F F V V V A S K L H I E N N I - R I S L S L L - L H Q R Y Y T - R T I S K E S V F L C C S C I K . . . . . . 101077 GAGTATAAAATTACAGAAAGGGGAAAAGTAAAAGAGACAACTTTATTCTCTTCAAACCAA E Y K I T E R G K V K E T T L F S S N Q S I K L Q K G E K - K R Q L Y S L Q T N G V - N Y R K G K S K R D N F I L F K P . . . . . . 101017 CCCCAATCAAGAACAATTATATAGAGGAAAAAAAGCATAGCACATAAACCTTTTTCCACT P Q S R T I I - R K K S I A H K P F S T P N Q E Q L Y R G K K A - H I N L F P L T P I K N N Y I E E K K H S T - T F F H . . . . . . 100957 TTACCCCATCTTTGTTCCTATACAGTGGAATATAATCCAACCACTTAATCTTCCCCCACC L P H L C S Y T V E Y N P T T - S S P T Y P I F V P I Q W N I I Q P L N L P P P F T P S L F L Y S G I - S N H L I F P H . . . . . . 100897 CCATCCAGAATGAATACTAATTAGACCAAAAACAAAAAAAAAATTGTACCTTTGTGTGGC P S R M N T N - T K N K K K I V P L C G H P E - I L I R P K T K K K L Y L C V A P I Q N E Y - L D Q K Q K K N C T F V W . . . . . . 100837 ATCATCAAGATTGAATCTTTCAAACTATCATCAGTGTGCTGTTACTTTAGATCTCTTCTT I I K I E S F K L S S V C C Y F R S L L S S R L N L S N Y H Q C A V T L D L F F H H Q D - I F Q T I I S V L L L - I S S . . . . . . 100777 TGCCTCACTGTAAAGCACCACACCCATTACAGTCACAGCAAATCCTGTTATGCCCATGAT C L T V K H H T H Y S H S K S C Y A H D A S L - S T T P I T V T A N P V M P M M L P H C K A P H P L Q S Q Q I L L C P - . . . . . . 100717 GTTCACTGGATTCCTGAATATCAAAACTGACACCACTGCAGCCACTGCAGCCTTGGCATT V H W I P E Y Q N - H H C S H C S L G I F T G F L N I K T D T T A A T A A L A F C S L D S - I S K L T P L Q P L Q P W H . . . . . . 100657 CCCCAAAACTTGCAGTGTCAAGGCACTTGTATGCTTAGTAACCAAGAAATTAGTCAAGTT P Q N L Q C Q G T C M L S N Q E I S Q V P K T C S V K A L V C L V T K K L V K F S P K L A V S R H L Y A - - P R N - S S . . . . . . 100597 CACCAAATAAGCAACTGTGGCATTACCAATCAACAAGAAAACCATAAATCCATCTCCCTT H Q I S N C G I T N Q Q E N H K S I S L T K - A T V A L P I N K K T I N P S P L S P N K Q L W H Y Q S T R K P - I H L P . . . . . . 100537 AGCTTTCTCCACTGTAACTGCAGCTACATTCCCCTCTATGTATAGTGTAAAAGGAAGCAA S F L H C N C S Y I P L Y V - C K R K Q A F S T V T A A T F P S M Y S V K G S K - L S P L - L Q L H S P L C I V - K E A . . . . . . 100477 AATCATTGCTGCCATTGGAGCCATGTATAATAACAGATTCATAGAGTGCAATTTCTCAGC N H C C H W S H V - - Q I H R V Q F L S I I A A I G A M Y N N R F I E C N F S A K S L L P L E P C I I T D S - S A I S Q . . . . . . 100417 ATCAGAGGATAACAACAACCCCTGAACAACAGATTTCAAGGCTCTCCCAGCAGTTGAACC I R G - Q Q P L N N R F Q G S P S S - T S E D N N N P - T T D F K A L P A V E P H Q R I T T T P E Q Q I S R L S Q Q L N . . . . . . 100357 TAAAGCCATCAAGAACCCAAACAAATGGAACAATGGCTCACTATTGCTAGCCAAAACAAT - S H Q E P K Q M E Q W L T I A S Q N N K A I K N P N K W N N G S L L L A K T I L K P S R T Q T N G T M A H Y C - P K Q . . . . . . 100297 ACCAAGAACCACAGGGACAAGAGCTAAATAAACCTCAGCAGTTTCTTTCTTACAAGTAAT T K N H R D K S - I N L S S F F L T S N P R T T G T R A K - T S A V S F L Q V I Y Q E P Q G Q E L N K P Q Q F L S Y K - . . . . . . 100237 CACAAAAGCAAAAATAGCAGTAAAAAATGGGGTAGTAGCACCAATTGCTTGATTAAACGA H K S K N S S K K W G S S T N C L I K R T K A K I A V K N G V V A P I A - L N D S Q K Q K - Q - K M G - - H Q L L D - T . . . . . . 100177 TACAGGAAGGTACCTCAATGAAGTATTACCACAAACAACAGAAAAACAAAAAATAGCACT Y R K V P Q - S I T T N N R K T K N S T T G R Y L N E V L P Q T T E K Q K I A L I Q E G T S M K Y Y H K Q Q K N K K - H . . . . . . 100117 CAAAGCAAGAATCTTGAAGAACTGTTTCCTGCTATGTATCTGCTGGAAAGGAACAACTTC Q S K N L E E L F P A M Y L L E R N N F K A R I L K N C F L L C I C W K G T T S S K Q E S - R T V S C Y V S A G K E Q L . . . . . . 100057 CAGCCACTTAATAGCAACTAAACTATAAGTAGCACATGACAACATATGCAACATAGTCAA Q P L N S N - T I S S T - Q H M Q H S Q S H L I A T K L - V A H D N I C N I V K P A T - - Q L N Y K - H M T T Y A T - S . . . . . . 99997 GAATATTGGGTAACGATAACCATAAAAACTCAAAAGATACTTGTTTAGCAACAACACCCC E Y W V T I T I K T Q K I L V - Q Q H P N I G - R - P - K L K R Y L F S N N T P R I L G N D N H K N S K D T C L A T T P . . . . . . 99937 AATATTTGAACAGTACCAAGAAGCAATTATAAGAGCAGTAAGTACATTTGGTGACACCAA N I - T V P R S N Y K S S K Y I W - H Q I F E Q Y Q E A I I R A V S T F G D T K Q Y L N S T K K Q L - E Q - V H L V T P . . . . . . 99877 AGAAGTTATCCCACCATTAGAATACTGTTGCTGCCTGATTTCAGCAGTTGGGGTTACTGG R S Y P T I R I L L L P D F S S W G Y W E V I P P L E Y C C C L I S A V G V T G K K L S H H - N T V A A - F Q Q L G L L . . . . . . 99817 CATATCCAAGACTTGATCTTGGGGTGACTCCAATCTTGGATTGCTTCCCCTTCTTGTAGT H I Q D L I L G - L Q S W I A S P S C S I S K T - S W G D S N L G L L P L L V V A Y P R L D L G V T P I L D C F P F L - . . . . . 99757 CCATGACTGTGCCTCCACCATTACAATGCTTCCAACAACTTAA P - L C L H H Y N A S N N L H D C A S T I T M L P T T - S M T V P P P L Q C F Q Q L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-21_AGS-1_PPS_1 (101194 100994) (frame '1'; 198 bp, 66 residues) 1 ESKLEFGQNI LGGQFSHKNI THREQYLKNQ SFFVVVASKE YKITERGKVK ETTLFSSNQP 61 QSRTII- >C08HBa0165B06.1-_PGL-21_AGS-1_PPS_3 (100687 100493) (frame '1'; 192 bp, 64 residues) 1 HHCSHCSLGI PQNLQCQGTC MLSNQEISQV HQISNCGITN QQENHKSISL SFLHCNCSYI 61 PLYV- >C08HBa0165B06.1-_PGL-21_AGS-1_PPS_2 (100587 100393) (frame '2'; 192 bp, 64 residues) 1 ATVALPINKK TINPSPLAFS TVTAATFPSM YSVKGSKIIA AIGAMYNNRF IECNFSASED 61 NNNP- PGL 22 (- strand): 114654 112322 AGS-1 (114654 114278,113405 113262,112766 112677,112437 112322) SCR (e 1.000 d 0.998 a 0.903,e 1.000 d 0.978 a 0.999,e 0.989 d 0.986 a 0.999,e 0.918) Exon 1 114654 114278 ( 377 n); score: 1.000 Intron 1 114277 113406 ( 872 n); Pd: 0.998 Pa: 0.903 Exon 2 113405 113262 ( 144 n); score: 1.000 Intron 2 113261 112767 ( 495 n); Pd: 0.978 Pa: 0.999 Exon 3 112766 112677 ( 90 n); score: 0.989 Intron 3 112676 112438 ( 239 n); Pd: 0.986 Pa: 0.999 Exon 4 112437 112322 ( 116 n); score: 0.918 PGS (114654 114278,113405 113262,112766 112677,112437 112322) SGN-E332291+ 3-phase translation of AGS-1 (-strand): . . . . . . 114654 TCGCTTCTCTTCTTCTGCTTCTTCCAATTCTTTCTCGGTTTTCTATGCACTGACTAGGCC S L L F F C F F Q F F L G F L C T D - A R F S S S A S S N S F S V F Y A L T R P A S L L L L L P I L S R F S M H - L G . . . . . . 114594 TTTTCCTTCTCCATTATCATCGATTCCAGTGTTTTTTTTTTCTTTCTTATCTCGTTCCTC F S F S I I I D S S V F F F F L I S F L F P S P L S S I P V F F F S F L S R S S L F L L H Y H R F Q C F F F L S Y L V P . . . . . . 114534 AAGATCACAATCGCTGTGTGAGAAAATCACGCTTGAGTTTCTATTTTCAAAATCGGCGGT K I T I A V - E N H A - V S I F K I G G R S Q S L C E K I T L E F L F S K S A V Q D H N R C V R K S R L S F Y F Q N R R . . . . . . 114474 TATCGGAAACTGTGCGATTGGAGAAATGGAGGAAGAAATGGAGGATATGGTTGAGTATAC Y R K L C D W R N G G R N G G Y G - V Y I G N C A I G E M E E E M E D M V E Y T L S E T V R L E K W R K K W R I W L S I . . . . . . 114414 TTTTACAGCGGTGGAGATTGACCTCGATTACGAGTTTGATGCACCTCGTTACTTTGATTT F Y S G G D - P R L R V - C T S L L - F F T A V E I D L D Y E F D A P R Y F D L L L Q R W R L T S I T S L M H L V T L I . . . . . . 114354 AGGTTGTGAAGAGGCTTTGCCTGAGACTCGTCAAGCTGAGAGTTGGTTTGAATCTGCCGG R L - R G F A - D S S S - E L V - I C R G C E E A L P E T R Q A E S W F E S A G - V V K R L C L R L V K L R V G L N L P . . : . . . . 114294 AAGCTATCCGCCTTCTC : CCTTCGTCACTAGGTTAATTTCGAAGGAGGACAGTTTCCTGGA K L S A F S : L R H - V N F E G G Q F P G S Y P P S : P F V T R L I S K E D S F L E E A I R L L : P S S L G - F R R R T V S W . . . . . . 113362 GAACATTCATGTATCTCCGAAATCCAAAGTTGTGAATATGAGTTTGTCTGGGAGTGATTC E H S C I S E I Q S C E Y E F V W E - F N I H V S P K S K V V N M S L S G S D S R T F M Y L R N P K L - I - V C L G V I . . . . . : . 113302 TGATATTGAGGTTGAGCAAGAGGTTCCTGCTGTAATGGAAG : AAGGCGTGGGCAACAATGC - Y - G - A R G S C C N G R : R R G Q Q C D I E V E Q E V P A V M E : E G V G N N A L I L R L S K R F L L - W K : K A W A T M . . . . . . 112747 AGAAATTTCTGCTAACTTAGGAATTAGCAACGCTGAGAAACTTTTAAATCAGCTGAGACA R N F C - L R N - Q R - E T F K S A E T E I S A N L G I S N A E K L L N Q L R Q Q K F L L T - E L A T L R N F - I S - D . . : . . . . 112687 GCTTCCTTCAG : GGTTGACTTTCTACAATCACACGGCTACAGGTGCCACTGCCACAACAGG A S F R : V D F L Q S H G Y R C H C H N R L P S : G L T F Y N H T A T G A T A T T G S F L Q : G - L S T I T R L Q V P L P Q Q . . . . . . 112388 TAAAACAAGGTGCTCAGGGAAGCCATCATGTCCCAGGGGTTCAACCCTCATGAAACCAAC - N K V L R E A I M S Q G F N P H E T N K T R C S G K P S C P R G S T L M K P T V K Q G A Q G S H H V P G V Q P S - N Q . 112328 CGCAAGT R K A S P Q Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-22_AGS-1_PPS_1 (114653 114278,113405 113262,112766 112677,112437 112322) (frame '2'; 726 bp, 242 residues) 1 RFSSSASSNS FSVFYALTRP FPSPLSSIPV FFFSFLSRSS RSQSLCEKIT LEFLFSKSAV 61 IGNCAIGEME EEMEDMVEYT FTAVEIDLDY EFDAPRYFDL GCEEALPETR QAESWFESAG 121 SYPPSPFVTR LISKEDSFLE NIHVSPKSKV VNMSLSGSDS DIEVEQEVPA VMEEGVGNNA 181 EISANLGISN AEKLLNQLRQ LPSGLTFYNH TATGATATTG KTRCSGKPSC PRGSTLMKPT 241 AS PGL 23 (+ strand): 120925 123698 AGS-1 (120925 121589,121744 121869,123171 123331,123419 123698) SCR (e 0.995 d 0.999 a 0.996,e 1.000 d 0.988 a 1.000,e 1.000 d 1.000 a 0.996,e 0.996) Exon 1 120925 121589 ( 665 n); score: 0.995 Intron 1 121590 121743 ( 154 n); Pd: 0.999 Pa: 0.996 Exon 2 121744 121869 ( 126 n); score: 1.000 Intron 2 121870 123170 (1301 n); Pd: 0.988 Pa: 1.000 Exon 3 123171 123331 ( 161 n); score: 1.000 Intron 3 123332 123418 ( 87 n); Pd: 1.000 Pa: 0.996 Exon 4 123419 123698 ( 280 n); score: 0.996 PGS (120925 121589) SGN-E333292+ PGS (120973 121422) SGN-E278998+ PGS (121515 121589,121744 121869,123171 123331,123419 123698) SGN-E321736+ 3-phase translation of AGS-1 (+strand): . . . . . . 120925 AATTCGACCAACTATTTGCCACCATTTTCTCCAAATCTCTTCTCCATCACTCACCTCCCT N S T N Y L P P F S P N L F S I T H L P I R P T I C H H F L Q I S S P S L T S L F D Q L F A T I F S K S L L H H S P P . . . . . . 120985 TTGTATTCTCCGTCCACCACCATCTCGCCGGCCAGGTAGCTGACTGACGTCATACTCCGA L Y S P S T T I S P A R - L T D V I L R C I L R P P P S R R P G S - L T S Y S D F V F S V H H H L A G Q V A D - R H T P . . . . . . 121045 CAAGGTGACGTCTTTCTCTACGCCTCCACTATGTCACAGTTATGACAAGGTCACGGAACC Q G D V F L Y A S T M S Q L - Q G H G T K V T S F S T P P L C H S Y D K V T E P T R - R L S L R L H Y V T V M T R S R N . . . . . . 121105 GTTCACCAACCAGAACAACAACCATTTCAACTGGCGGCGCCGGCGGCAGAGACGGAGGAG V H Q P E Q Q P F Q L A A P A A E T E E F T N Q N N N H F N W R R R R Q R R R R R S P T R T T T I S T G G A G G R D G G . . . . . . 121165 GAGCCACGACGGCGATGAGGGTGATAGTACCCTTACAAGGTGTAGTACAAGGTCGGGGTG E P R R R - G - - Y P Y K V - Y K V G V S H D G D E G D S T L T R C S T R S G W G A T T A M R V I V P L Q G V V Q G R G . . . . . . 121225 GTCTTTTCTTAGGTTCAGTAATACCCTGTGCTCTTTTTTATTTTTGGCAACTCTACCTAA V F S - V Q - Y P V L F F I F G N S T - S F L R F S N T L C S F L F L A T L P K G L F L G S V I P C A L F Y F W Q L Y L . . . . . . 121285 AACGAAATCGTTCCTCCGGTGGTGACAATAACGGCGAATCTACGGCACCGGCGAGGTCAC N E I V P P V V T I T A N L R H R R G H T K S F L R W - Q - R R I Y G T G E V T K R N R S S G G D N N G E S T A P A R S . . . . . . 121345 CGTCGTCGACCCATTTGCCAGAAGTGTCTTCTGGGTCTGGGTTACAAAGGGTTCATTCAC R R R P I C Q K C L L G L G Y K G F I H V V D P F A R S V F W V W V T K G S F T P S S T H L P E V S S G S G L Q R V H S . . . . . . 121405 GTCTGTTATTGTCACCGAAGGGAACTACTGGGCAATCTCAGGTATCTGCTAGAGCTAATT V C Y C H R R E L L G N L R Y L L E L I S V I V T E G N Y W A I S G I C - S - F R L L L S P K G T T G Q S Q V S A R A N . . . . . . 121465 CGATTATTTCTAAACAAATTGATAGTAGCCCTTACTATGTTGGATTGAAAAGAGCTTCTG R L F L N K L I V A L T M L D - K E L L D Y F - T N - - - P L L C W I E K S F - S I I S K Q I D S S P Y Y V G L K R A S . . . . . . 121525 AAGACCCTTATGATGAGTCGAGTAATCCAGATGGTGTTATTCAGCTAGGATTAGCAGAAA K T L M M S R V I Q M V L F S - D - Q K R P L - - V E - S R W C Y S A R I S R K E D P Y D E S S N P D G V I Q L G L A E . : . . . . . 121585 ACAAG : TTGTCACTGGATTTAGTTCAAGAATGGCTAGCAGAAAATGTGTCAAGATGGATGA T S : C H W I - F K N G - Q K M C Q D G - Q : V V T G F S S R M A S R K C V K M D D N K : L S L D L V Q E W L A E N V S R W M . . . . . . 121799 TGACTCAAGATTCGAGTATAACCGGAATAGCTACTTATCAGCCATTTGACGGGTTATTGG - L K I R V - P E - L L I S H L T G Y W D S R F E Y N R N S Y L S A I - R V I G M T Q D S S I T G I A T Y Q P F D G L L . . : . . . . 121859 AGCTGAAAGTG : GCTGTGGGAGAATTTATGTCTCAAGCTCTAGAGAGATCAGTGTCCTTCA S - K W : L W E N L C L K L - R D Q C P S A E S : G C G R I Y V S S S R E I S V L Q E L K V : A V G E F M S Q A L E R S V S F . . . . . . 123220 GCCCCTCACAAATGGTTCTTACCGGTGGTGCAACTCCTGCGCTTGAGATACTGAGCTTCT A P H K W F L P V V Q L L R L R Y - A S P L T N G S Y R W C N S C A - D T E L L S P S Q M V L T G G A T P A L E I L S F . . . . . . : 123280 GCCTAGCTGATCCTGGAAATGCTTTTCTTGTTCCCTCACCATATTATCCTGA : TCTTGATA A - L I L E M L F L F P H H I I L : I L I P S - S W K C F S C S L T I L S - : S - - C L A D P G N A F L V P S P Y Y P D : L D . . . . . . 123427 GGGATGTCAAGTGGAGAACTGGAGTGGAGATTATACCTGTTCCTTGCCGCAGTGCAGACA G M S S G E L E W R L Y L F L A A V Q T G C Q V E N W S G D Y T C S L P Q C R Q R D V K W R T G V E I I P V P C R S A D . . . . . . 123487 ACTTTAACTTGAGCATTGATGCTCTTGACCGAGCTTTTAACCAAGCTAAGAAACGTGGTC T L T - A L M L L T E L L T K L R N V V L - L E H - C S - P S F - P S - E T W S N F N L S I D A L D R A F N Q A K K R G . . . . . . 123547 TTAAAGTACGAGGGATTATCATTTCTAACCCCTCGAATCCTGTGGGCAATATTTTCTCTA L K Y E G L S F L T P R I L W A I F S L - S T R D Y H F - P L E S C G Q Y F L - L K V R G I I I S N P S N P V G N I F S . . . . . . 123607 GGGAGACACTTTATAACCTCTTAGACTTTACAACTGAGAAGAACATCCATGTAATATCCA G R H F I T S - T L Q L R R T S M - Y P G D T L - P L R L Y N - E E H P C N I Q R E T L Y N L L D F T T E K N I H V I S . . . . 123667 ATGAAATCTTGGCAGGGTCAACTTATGGAAAT M K S W Q G Q L M E - N L G R V N L W K N E I L A G S T Y G N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-23_AGS-1_PPS_1 (121053 121589,121744 121869,123171 123331,123419 123698) (frame '0'; 1104 bp, 368 residues) 1 RLSLRLHYVT VMTRSRNRSP TRTTTISTGG AGGRDGGGAT TAMRVIVPLQ GVVQGRGGLF 61 LGSVIPCALF YFWQLYLKRN RSSGGDNNGE STAPARSPSS THLPEVSSGS GLQRVHSRLL 121 LSPKGTTGQS QVSARANSII SKQIDSSPYY VGLKRASEDP YDESSNPDGV IQLGLAENKL 181 SLDLVQEWLA ENVSRWMMTQ DSSITGIATY QPFDGLLELK VAVGEFMSQA LERSVSFSPS 241 QMVLTGGATP ALEILSFCLA DPGNAFLVPS PYYPDLDRDV KWRTGVEIIP VPCRSADNFN 301 LSIDALDRAF NQAKKRGLKV RGIIISNPSN PVGNIFSRET LYNLLDFTTE KNIHVISNEI 361 LAGSTYGN PGL 24 (- strand): 126164 125461 AGS-1 (126164 125461) SCR (e 1.000) Exon 1 126164 125461 ( 704 n); score: 1.000 PGS (126163 125461) SGN-E345187+ PGS (126163 125500) SGN-E345419+ PGS (126164 125981) SGN-E392929+ 3-phase translation of AGS-1 (-strand): . . . . . . 126164 CTTTTCAGCAAGACTTTGCCTTCAAAATATGAGGACTGGGAGGCTGGCACAAAAGCCTTG L F S K T L P S K Y E D W E A G T K A L F S A R L C L Q N M R T G R L A Q K P C F Q Q D F A F K I - G L G G W H K S L . . . . . . 126104 CTAGACAAGGAGTCTTTGATTGGTGGGGGAACAATTGGATCAGTTTACAGAACTTCCTTT L D K E S L I G G G T I G S V Y R T S F - T R S L - L V G E Q L D Q F T E L P L A R Q G V F D W W G N N W I S L Q N F L . . . . . . 126044 GAAGGTGGTGTATCAATTGCAGTGAAAAAGCTCGAGACATTGGGGCAAATCAGAAATCAA E G G V S I A V K K L E T L G Q I R N Q K V V Y Q L Q - K S S R H W G K S E I K - R W C I N C S E K A R D I G A N Q K S . . . . . . 125984 GATGAATTTGAGCATGAAGTTGGCCGGTTAGGGACCCTTCAGCACCCCAATCTTGTTGCT D E F E H E V G R L G T L Q H P N L V A M N L S M K L A G - G P F S T P I L L L R - I - A - S W P V R D P S A P Q S C C . . . . . . 125924 TTACAAGGGTACTACTGGTCCTCTAGCATGCAGTTAATATTGTCGGAGTTTGTTCCGAAT L Q G Y Y W S S S M Q L I L S E F V P N Y K G T T G P L A C S - Y C R S L F R M F T R V L L V L - H A V N I V G V C S E . . . . . . 125864 GGAAACCTATATGACAATTTGCATGGACTTAGTTATCCTGGAACCAGCACTGGTGCTGGT G N L Y D N L H G L S Y P G T S T G A G E T Y M T I C M D L V I L E P A L V L V W K P I - Q F A W T - L S W N Q H W C W . . . . . . 125804 AACCCAGAATTGAATTGGCCAAGAAGGTTTCAGATAGCAGTTGGAACAGCTCGAGCGCTC N P E L N W P R R F Q I A V G T A R A L T Q N - I G Q E G F R - Q L E Q L E R S - P R I E L A K K V S D S S W N S S S A . . . . . . 125744 ACATATCTTCACCATGATTGCAAACCTCCTGTCCTTCATCTTAATGTCAAGTCCACTAAT T Y L H H D C K P P V L H L N V K S T N H I F T M I A N L L S F I L M S S P L I H I S S P - L Q T S C P S S - C Q V H - . . . . . . 125684 ATACTCCTGGACACAAACTATGAAGCCAAATTGACTGATTATGGCCTGAGTAGGTTCCTT I L L D T N Y E A K L T D Y G L S R F L Y S W T Q T M K P N - L I M A - V G S F Y T P G H K L - S Q I D - L W P E - V P . . . . . . 125624 CCCCTGCTAGACAATTATGGACTAACCAAATTTCACAATGCAGTTGGTTACGTTGCACCA P L L D N Y G L T K F H N A V G Y V A P P C - T I M D - P N F T M Q L V T L H Q S P A R Q L W T N Q I S Q C S W L R C T . . . . . . 125564 GAGTTGGCGCAAAGTCTGAGACTAAGTGATAAATGTGACGTTTACAGTTTCGGGGTGATT E L A Q S L R L S D K C D V Y S F G V I S W R K V - D - V I N V T F T V S G - F R V G A K S E T K - - M - R L Q F R G D . . . . . 125504 CTGCTGGAGTTGGTCACTGGGAGGAAACCAGTAGAGAGCCCAAT L L E L V T G R K P V E S P C W S W S L G G N Q - R A Q S A G V G H W E E T S R E P N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-24_AGS-1_PPS_1 (126164 125463) (frame '1'; 702 bp, 234 residues) 1 LFSKTLPSKY EDWEAGTKAL LDKESLIGGG TIGSVYRTSF EGGVSIAVKK LETLGQIRNQ 61 DEFEHEVGRL GTLQHPNLVA LQGYYWSSSM QLILSEFVPN GNLYDNLHGL SYPGTSTGAG 121 NPELNWPRRF QIAVGTARAL TYLHHDCKPP VLHLNVKSTN ILLDTNYEAK LTDYGLSRFL 181 PLLDNYGLTK FHNAVGYVAP ELAQSLRLSD KCDVYSFGVI LLELVTGRKP VESP 3-phase translation of AGS-1 (+strand): . . . . . . 125461 ATTGGGCTCTCTACTGGTTTCCTCCCAGTGACCAACTCCAGCAGAATCACCCCGAAACTG I G L S T G F L P V T N S S R I T P K L L G S L L V S S Q - P T P A E S P R N C W A L Y W F P P S D Q L Q Q N H P E T . . . . . . 125521 TAAACGTCACATTTATCACTTAGTCTCAGACTTTGCGCCAACTCTGGTGCAACGTAACCA - T S H L S L S L R L C A N S G A T - P K R H I Y H L V S D F A P T L V Q R N Q V N V T F I T - S Q T L R Q L W C N V T . . . . . . 125581 ACTGCATTGTGAAATTTGGTTAGTCCATAATTGTCTAGCAGGGGAAGGAACCTACTCAGG T A L - N L V S P - L S S R G R N L L R L H C E I W L V H N C L A G E G T Y S G N C I V K F G - S I I V - Q G K E P T Q . . . . . . 125641 CCATAATCAGTCAATTTGGCTTCATAGTTTGTGTCCAGGAGTATATTAGTGGACTTGACA P - S V N L A S - F V S R S I L V D L T H N Q S I W L H S L C P G V Y - W T - H A I I S Q F G F I V C V Q E Y I S G L D . . . . . . 125701 TTAAGATGAAGGACAGGAGGTTTGCAATCATGGTGAAGATATGTGAGCGCTCGAGCTGTT L R - R T G G L Q S W - R Y V S A R A V - D E G Q E V C N H G E D M - A L E L F I K M K D R R F A I M V K I C E R S S C . . . . . . 125761 CCAACTGCTATCTGAAACCTTCTTGGCCAATTCAATTCTGGGTTACCAGCACCAGTGCTG P T A I - N L L G Q F N S G L P A P V L Q L L S E T F L A N S I L G Y Q H Q C W S N C Y L K P S W P I Q F W V T S T S A . . . . . . 125821 GTTCCAGGATAACTAAGTCCATGCAAATTGTCATATAGGTTTCCATTCGGAACAAACTCC V P G - L S P C K L S Y R F P F G T N S F Q D N - V H A N C H I G F H S E Q T P G S R I T K S M Q I V I - V S I R N K L . . . . . . 125881 GACAATATTAACTGCATGCTAGAGGACCAGTAGTACCCTTGTAAAGCAACAAGATTGGGG D N I N C M L E D Q - Y P C K A T R L G T I L T A C - R T S S T L V K Q Q D W G R Q Y - L H A R G P V V P L - S N K I G . . . . . . 125941 TGCTGAAGGGTCCCTAACCGGCCAACTTCATGCTCAAATTCATCTTGATTTCTGATTTGC C - R V P N R P T S C S N S S - F L I C A E G S L T G Q L H A Q I H L D F - F A V L K G P - P A N F M L K F I L I S D L . . . . . . 126001 CCCAATGTCTCGAGCTTTTTCACTGCAATTGATACACCACCTTCAAAGGAAGTTCTGTAA P N V S S F F T A I D T P P S K E V L - P M S R A F S L Q L I H H L Q R K F C K P Q C L E L F H C N - Y T T F K G S S V . . . . . . 126061 ACTGATCCAATTGTTCCCCCACCAATCAAAGACTCCTTGTCTAGCAAGGCTTTTGTGCCA T D P I V P P P I K D S L S S K A F V P L I Q L F P H Q S K T P C L A R L L C Q N - S N C S P T N Q R L L V - Q G F C A . . . . . 126121 GCCTCCCAGTCCTCATATTTTGAAGGCAAAGTCTTGCTGAAAAG A S Q S S Y F E G K V L L K P P S P H I L K A K S C - K S L P V L I F - R Q S L A E K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-24_AGS-1_PPS_1 (125619 125858) (frame '0'; 237 bp, 79 residues) 1 QGKEPTQAII SQFGFIVCVQ EYISGLDIKM KDRRFAIMVK ICERSSCSNC YLKPSWPIQF 61 WVTSTSAGSR ITKSMQIVI- PGL 25 (- strand): 128244 127399 AGS-1 (128244 127399) SCR (e 0.997) Exon 1 128244 127399 ( 846 n); score: 0.997 PGS (128193 127399) SGN-E555521+ PGS (128244 127950) SGN-E282413+ 3-phase translation of AGS-1 (-strand): . . . . . . 128244 AAAGTTCCAAACTTTATTGTTTCATTCAAGAAAAGAGTACCAAATCATAGAATTTTAAGC K V P N F I V S F K K R V P N H R I L S K F Q T L L F H S R K E Y Q I I E F - A S S K L Y C F I Q E K S T K S - N F K . . . . . . 128184 TATACCCAATAAATGCACTTTAATTACTTTCTTGTTTTAAGAAGATACTGAGTAAGTATT Y T Q - M H F N Y F L V L R R Y - V S I I P N K C T L I T F L F - E D T E - V F L Y P I N A L - L L S C F K K I L S K Y . . . . . . 128124 TAAAATGCTTTTGTTTAGTCAAGATCGAAATCTTGTATTTTTGATAATTGAACCTCATTT - N A F V - S R S K S C I F D N - T S F K M L L F S Q D R N L V F L I I E P H L L K C F C L V K I E I L Y F - - L N L I . . . . . . 128064 GAGAAAAGGCAAAAGGGTGTCTGGAGAAGTAGAGATCAACAAGTTCCAAGATTGGATCCA E K R Q K G V W R S R D Q Q V P R L D P R K G K R V S G E V E I N K F Q D W I Q - E K A K G C L E K - R S T S S K I G S . . . . . . 128004 GCTATGATAATGTTTGAGTGTTTGTGCTGGGGAACATGAGAAAATTAGGTACATTTGTTC A M I M F E C L C W G T - E N - V H L F L - - C L S V C A G E H E K I R Y I C S S Y D N V - V F V L G N M R K L G T F V . . . . . . 127944 ATTGTGTTGTTTTAGTTTGGTGTTTTTGTTTGATTGAATTGGAATTGGTATCTCCCATCA I V L F - F G V F V - L N W N W Y L P S L C C F S L V F L F D - I G I G I S H H H C V V L V W C F C L I E L E L V S P I . . . . . . 127884 CTGAAAAGGAGATCCTTCTTCAGTTCAAGGGTAACATTTCTACTGACCCTTTTAATAGTT L K R R S F F S S R V T F L L T L L I V - K G D P S S V Q G - H F Y - P F - - F T E K E I L L Q F K G N I S T D P F N S . . . . . . 127824 TAGCTTCTTGGGATCCTAATGGAACTCCTTGCCTAGACTTTAGTGGTGTTTTCTGCAATT - L L G I L M E L L A - T L V V F S A I S F L G S - W N S L P R L - W C F L Q F L A S W D P N G T P C L D F S G V F C N . . . . . . 127764 CTGTTGGAAATGTGGTGAAGATTGTGTTGTGGAACACTAGTCTTGGTGGGGTTCTCTCCC L L E M W - R L C C G T L V L V G F S P C W K C G E D C V V E H - S W W G S L P S V G N V V K I V L W N T S L G G V L S . . . . . . 127704 CTGCCTTAGCAGAACTTAAGTCTTTGCGCATCCTTACCTTGTTTGGGAACCAATTTACTG L P - Q N L S L C A S L P C L G T N L L C L S R T - V F A H P Y L V W E P I Y W P A L A E L K S L R I L T L F G N Q F T . . . . . . 127644 GCAATATTCCTGCAGAGTATGGGGGGATTGATTCATTGTGGAAGATTAACTTCAGCTCTA A I F L Q S M G G L I H C G R L T S A L Q Y S C R V W G D - F I V E D - L Q L - G N I P A E Y G G I D S L W K I N F S S . . . . . . 127584 ATGCCTTTTCTGGTTCAATTCCTGAATTTCTTGGGGATTTACCTAATATAAGGTTCCTTG M P F L V Q F L N F L G I Y L I - G S L C L F W F N S - I S W G F T - Y K V P - N A F S G S I P E F L G D L P N I R F L . . . . . . 127524 ATTTGTCAAGAAATGTGTATAGTGGTGAAATTCCTGTGTCTTTGTTTGTGAATTGTAACA I C Q E M C I V V K F L C L C L - I V T F V K K C V - W - N S C V F V C E L - Q D L S R N V Y S G E I P V S L F V N C N . . . . . . 127464 AAACAAGGTTCATTTCCTTGTCCCATAACAATCTTTCAGGTTCAATTCCAGCATCAATTG K Q G S F P C P I T I F Q V Q F Q H Q L N K V H F L V P - Q S F R F N S S I N W K T R F I S L S H N N L S G S I P A S I . 127404 GAAACT E T K G N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1-_PGL-25_AGS-1_PPS_1 (127987 127400) (frame '0'; 588 bp, 196 residues) 1 VFVLGNMRKL GTFVHCVVLV WCFCLIELEL VSPITEKEIL LQFKGNISTD PFNSLASWDP 61 NGTPCLDFSG VFCNSVGNVV KIVLWNTSLG GVLSPALAEL KSLRILTLFG NQFTGNIPAE 121 YGGIDSLWKI NFSSNAFSGS IPEFLGDLPN IRFLDLSRNV YSGEIPVSLF VNCNKTRFIS 181 LSHNNLSGSI PASIGN 3-phase translation of AGS-1 (+strand): . . . . . . 127399 AGTTTCCAATTGATGCTGGAATTGAACCTGAAAGATTGTTATGGGACAAGGAAATGAACC S F Q L M L E L N L K D C Y G T R K - T V S N - C W N - T - K I V M G Q G N E P F P I D A G I E P E R L L W D K E M N . . . . . . 127459 TTGTTTTGTTACAATTCACAAACAAAGACACAGGAATTTCACCACTATACACATTTCTTG L F C Y N S Q T K T Q E F H H Y T H F L C F V T I H K Q R H R N F T T I H I S - L V L L Q F T N K D T G I S P L Y T F L . . . . . . 127519 ACAAATCAAGGAACCTTATATTAGGTAAATCCCCAAGAAATTCAGGAATTGAACCAGAAA T N Q G T L Y - V N P Q E I Q E L N Q K Q I K E P Y I R - I P K K F R N - T R K D K S R N L I L G K S P R N S G I E P E . . . . . . 127579 AGGCATTAGAGCTGAAGTTAATCTTCCACAATGAATCAATCCCCCCATACTCTGCAGGAA R H - S - S - S S T M N Q S P H T L Q E G I R A E V N L P Q - I N P P I L C R N K A L E L K L I F H N E S I P P Y S A G . . . . . . 127639 TATTGCCAGTAAATTGGTTCCCAAACAAGGTAAGGATGCGCAAAGACTTAAGTTCTGCTA Y C Q - I G S Q T R - G C A K T - V L L I A S K L V P K Q G K D A Q R L K F C - I L P V N W F P N K V R M R K D L S S A . . . . . . 127699 AGGCAGGGGAGAGAACCCCACCAAGACTAGTGTTCCACAACACAATCTTCACCACATTTC R Q G R E P H Q D - C S T T Q S S P H F G R G E N P T K T S V P Q H N L H H I S K A G E R T P P R L V F H N T I F T T F . . . . . . 127759 CAACAGAATTGCAGAAAACACCACTAAAGTCTAGGCAAGGAGTTCCATTAGGATCCCAAG Q Q N C R K H H - S L G K E F H - D P K N R I A E N T T K V - A R S S I R I P R P T E L Q K T P L K S R Q G V P L G S Q . . . . . . 127819 AAGCTAAACTATTAAAAGGGTCAGTAGAAATGTTACCCTTGAACTGAAGAAGGATCTCCT K L N Y - K G Q - K C Y P - T E E G S P S - T I K R V S R N V T L E L K K D L L E A K L L K G S V E M L P L N - R R I S . . . . . . 127879 TTTCAGTGATGGGAGATACCAATTCCAATTCAATCAAACAAAAACACCAAACTAAAACAA F Q - W E I P I P I Q S N K N T K L K Q F S D G R Y Q F Q F N Q T K T P N - N N F S V M G D T N S N S I K Q K H Q T K T . . . . . . 127939 CACAATGAACAAATGTACCTAATTTTCTCATGTTCCCCAGCACAAACACTCAAACATTAT H N E Q M Y L I F S C S P A Q T L K H Y T M N K C T - F S H V P Q H K H S N I I T Q - T N V P N F L M F P S T N T Q T L . . . . . . 127999 CATAGCTGGATCCAATCTTGGAACTTGTTGATCTCTACTTCTCCAGACACCCTTTTGCCT H S W I Q S W N L L I S T S P D T L L P I A G S N L G T C - S L L L Q T P F C L S - L D P I L E L V D L Y F S R H P F A . . . . . . 128059 TTTCTCAAATGAGGTTCAATTATCAAAAATACAAGATTTCGATCTTGACTAAACAAAAGC F L K - G S I I K N T R F R S - L N K S F S N E V Q L S K I Q D F D L D - T K A F S Q M R F N Y Q K Y K I S I L T K Q K . . . . . . 128119 ATTTTAAATACTTACTCAGTATCTTCTTAAAACAAGAAAGTAATTAAAGTGCATTTATTG I L N T Y S V S S - N K K V I K V H L L F - I L T Q Y L L K T R K - L K C I Y W H F K Y L L S I F L K Q E S N - S A F I . . . . . . 128179 GGTATAGCTTAAAATTCTATGATTTGGTACTCTTTTCTTGAATGAAACAATAAAGTTTGG G I A - N S M I W Y S F L E - N N K V W V - L K I L - F G T L F L N E T I K F G G Y S L K F Y D L V L F S - M K Q - S L . 128239 AACTTT N F T E L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0165B06.1+_PGL-25_AGS-1_PPS_1 (127401 127865) (frame '0'; 462 bp, 154 residues) 1 FPIDAGIEPE RLLWDKEMNL VLLQFTNKDT GISPLYTFLD KSRNLILGKS PRNSGIEPEK 61 ALELKLIFHN ESIPPYSAGI LPVNWFPNKV RMRKDLSSAK AGERTPPRLV FHNTIFTTFP 121 TELQKTPLKS RQGVPLGSQE AKLLKGSVEM LPLN- PGL 26 (- strand): 129576 129153 AGS-1 (129576 129153) SCR (e 0.915) Exon 1 129576 129153 ( 424 n); score: 0.915 PGS (129400 129153) SGN-E578392- PGS (129226 129153) SGN-E391901+ PGS (129556 129216) SGN-E253695+ PGS (129475 129229) SGN-E204223- PGS (129450 129229) SGN-E374844- PGS (129556 129274) SGN-E249253+ PGS (129576 129298) SGN-E242674- PGS (129576 129298) SGN-E233074- PGS (129576 129298) SGN-E233735- PGS (129576 129298) SGN-E377238- PGS (129576 129298) SGN-E240879- PGS (129551 129298) SGN-E233594- PGS (129576 129299) SGN-E237992- PGS (129551 129426) SGN-E376754- PGS (129576 129443) SGN-E377316- PGS (129563 129451) SGN-E577960+ PGS (129576 129454) SGN-E217478- PGS (129576 129454) SGN-E229134- PGS (129529 129454) SGN-E228654- PGS (129576 129463) SGN-E240526+ PGS (129576 129498) SGN-E256217- 3-phase translation of AGS-1 (-strand): . . . . . . 129576 AGCAAGTGAGTCAAAGATTATTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACT S K - V K D Y L E P V W L S L K A G Q T A S E S K I I - S L F G S A - K L V K L Q V S Q R L F R A C L A Q L K S W S N . . . . . . 129516 GACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGACAATACTCAAAATAGCTTATTT D L K A G F - L I - L F D N T Q N S L F T - K L V F D L F N C L T I L K I A Y F - L K S W F L T Y L T V - Q Y S K - L I . . . . . . 129456 TAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTT - V K K N L F - A K S - K L G - G C F F K L K K T Y F K P K V K S W G R G A F F L S - K K L I L S Q K L K A G V G V L F . . . . . . 129396 TTTTTTAGCTTATAAGCTGTTTTAAGTTGACCACATTTTTATGTTTTTTCCCTTAATATT F F S L - A V L S - P H F Y V F S L N I F L A Y K L F - V D H I F M F F P L I F F F - L I S C F K L T T F L C F F P - Y . . . . . . 129336 TTTATACAATCTCCAAATTACCCATATAACCCTAACATCTCTTTCTTCTATTTTTCCCTC F I Q S P N Y P Y N P N I S F F Y F S L L Y N L Q I T H I T L T S L S S I F P S F Y T I S K L P I - P - H L F L L F F P . . . . . . 129276 TTCACGTTTGACATAACAACTTCAGCACTTTTATCTAAACGCATAACTGCTTATTTTAAA F T F D I T T S A L L S K R I T A Y F K S R L T - Q L Q H F Y L N A - L L I L K L H V - H N N F S T F I - T H N C L F - . . . . . . 129216 AATAAGTTTCAGCACTTTCAAAAGTACTTTTTTTAAAGCTGCTTTTATTAAGCCCATCCA N K F Q H F Q K Y F F - S C F Y - A H P I S F S T F K S T F F K A A F I K P I Q K - V S A L S K V L F L K L L L L S P S . 129156 AACG N T K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 129153 CGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAAAGTACTTTTGAAAGTGCTGAAACT R L D G L N K S S F K K S T F E S A E T V W M G L I K A A L K K V L L K V L K L F G W A - - K Q L - K K Y F - K C - N . . . . . . 129213 TATTTTTAAAATAAGCAGTTATGCGTTTAGATAAAAGTGCTGAAGTTGTTATGTCAAACG Y F - N K Q L C V - I K V L K L L C Q T I F K I S S Y A F R - K C - S C Y V K R L F L K - A V M R L D K S A E V V M S N . . . . . . 129273 TGAAGAGGGAAAAATAGAAGAAAGAGATGTTAGGGTTATATGGGTAATTTGGAGATTGTA - R G K N R R K R C - G Y M G N L E I V E E G K I E E R D V R V I W V I W R L Y V K R E K - K K E M L G L Y G - F G D C . . . . . . 129333 TAAAAATATTAAGGGAAAAAACATAAAAATGTGGTCAACTTAAAACAGCTTATAAGCTAA - K Y - G K K H K N V V N L K Q L I S - K N I K G K N I K M W S T - N S L - A K I K I L R E K T - K C G Q L K T A Y K L . . . . . . 129393 AAAAAAAAAAGCACCCCTACCCCAGCTTTTAACTTTTGGCTTAAAATAAGTTTTTTTTAA K K K S T P T P A F N F W L K I S F F - K K K A P L P Q L L T F G L K - V F F N K K K K H P Y P S F - L L A - N K F F L . . . . . . 129453 CTTAAAATAAGCTATTTTGAGTATTGTCAAACAGTTAAATAAGTCAAAAACCAGCTTTTA L K I S Y F E Y C Q T V K - V K N Q L L L K - A I L S I V K Q L N K S K T S F - T - N K L F - V L S N S - I S Q K P A F . . . . . . 129513 AGTCAGTTTGACCAGCTTTTAAGCTGAGCCAAACAGGCTCTAAATAATCTTTGACTCACT S Q F D Q L L S - A K Q A L N N L - L T V S L T S F - A E P N R L - I I F D S L K S V - P A F K L S Q T G S K - S L T H . 129573 TGCT C A L Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 22:31:25 2006